Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene069796.t1 | XP_024632961.1 | 87.9 | 713 | 74 | 3 | 1 | 701 | 81 | 793 | 0.00E+00 | 1268.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene069796.t1 | Q9SZL8 | 26.4 | 598 | 374 | 10 | 6 | 601 | 104 | 637 | 5.0e-59 | 230.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene069796.t1 | D3YBB9 | 79.7 | 709 | 124 | 4 | 2 | 700 | 114 | 812 | 0.0e+00 | 1137.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene069796.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene069796.t1 | MTR_0558s0020 | 88.312 | 231 | 27 | 0 | 1 | 231 | 66 | 296 | 4.19e-152 | 443 |
MS.gene069796.t1 | MTR_6g090505 | 83.122 | 237 | 40 | 0 | 1 | 237 | 1 | 237 | 1.10e-141 | 419 |
MS.gene069796.t1 | MTR_6g090505 | 67.647 | 102 | 6 | 2 | 332 | 431 | 230 | 306 | 3.33e-34 | 134 |
MS.gene069796.t1 | MTR_6g090505 | 77.551 | 49 | 11 | 0 | 503 | 551 | 314 | 362 | 8.37e-12 | 67.8 |
MS.gene069796.t1 | MTR_1g083640 | 89.706 | 204 | 21 | 0 | 1 | 204 | 81 | 284 | 3.84e-135 | 399 |
MS.gene069796.t1 | MTR_8g446020 | 79.386 | 228 | 47 | 0 | 4 | 231 | 29 | 256 | 4.17e-130 | 385 |
MS.gene069796.t1 | MTR_0337s0060 | 58.861 | 316 | 30 | 4 | 383 | 695 | 21 | 239 | 4.50e-109 | 330 |
MS.gene069796.t1 | MTR_2g014100 | 86.628 | 172 | 23 | 0 | 1 | 172 | 74 | 245 | 6.49e-106 | 323 |
MS.gene069796.t1 | MTR_0337s0040 | 77.604 | 192 | 43 | 0 | 4 | 195 | 30 | 221 | 2.67e-104 | 318 |
MS.gene069796.t1 | MTR_1g055240 | 87.324 | 142 | 18 | 0 | 27 | 168 | 3 | 144 | 4.85e-86 | 267 |
MS.gene069796.t1 | MTR_0019s0290 | 81.579 | 152 | 28 | 0 | 18 | 169 | 9 | 160 | 4.07e-85 | 265 |
MS.gene069796.t1 | MTR_3g008240 | 85.507 | 138 | 20 | 0 | 1 | 138 | 66 | 203 | 1.19e-79 | 253 |
MS.gene069796.t1 | MTR_3g028680 | 80.132 | 151 | 27 | 1 | 554 | 701 | 1 | 151 | 1.95e-79 | 251 |
MS.gene069796.t1 | MTR_4g040430 | 84.783 | 138 | 17 | 1 | 1 | 138 | 65 | 198 | 1.15e-77 | 247 |
MS.gene069796.t1 | MTR_2g067090 | 77.703 | 148 | 30 | 1 | 557 | 701 | 99 | 246 | 1.08e-70 | 232 |
MS.gene069796.t1 | MTR_4g133495 | 62.983 | 181 | 41 | 2 | 512 | 689 | 88 | 245 | 8.11e-67 | 221 |
MS.gene069796.t1 | MTR_4g133340 | 62.983 | 181 | 41 | 2 | 512 | 689 | 88 | 245 | 8.11e-67 | 221 |
MS.gene069796.t1 | MTR_5g071590 | 79.612 | 103 | 21 | 0 | 1 | 103 | 78 | 180 | 1.66e-55 | 188 |
MS.gene069796.t1 | MTR_6g051425 | 33.333 | 273 | 154 | 5 | 21 | 277 | 64 | 324 | 9.29e-37 | 141 |
MS.gene069796.t1 | MTR_1281s0010 | 80.952 | 63 | 12 | 0 | 1 | 63 | 47 | 109 | 3.15e-29 | 112 |
MS.gene069796.t1 | MTR_2g067130 | 60.811 | 74 | 23 | 2 | 631 | 701 | 46 | 116 | 1.94e-17 | 80.5 |
MS.gene069796.t1 | MTR_1g070355 | 25.357 | 280 | 193 | 4 | 21 | 298 | 119 | 384 | 3.55e-16 | 82.8 |
MS.gene069796.t1 | MTR_0337s0050 | 75.000 | 36 | 9 | 0 | 195 | 230 | 14 | 49 | 1.27e-13 | 67.0 |
MS.gene069796.t1 | MTR_0402s0040 | 26.000 | 150 | 96 | 3 | 20 | 169 | 71 | 205 | 1.10e-12 | 71.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene069796.t1 | AT4G38180 | 27.844 | 589 | 349 | 12 | 20 | 601 | 118 | 637 | 1.61e-68 | 240 |
MS.gene069796.t1 | AT4G15090 | 25.833 | 600 | 382 | 11 | 59 | 654 | 121 | 661 | 1.70e-59 | 215 |
MS.gene069796.t1 | AT4G15090 | 25.833 | 600 | 382 | 11 | 59 | 654 | 121 | 661 | 1.70e-59 | 215 |
MS.gene069796.t1 | AT4G15090 | 25.833 | 600 | 382 | 11 | 59 | 654 | 121 | 661 | 1.70e-59 | 215 |
MS.gene069796.t1 | AT4G15090 | 25.833 | 600 | 382 | 11 | 59 | 654 | 121 | 661 | 1.70e-59 | 215 |
MS.gene069796.t1 | AT4G15090 | 25.833 | 600 | 382 | 11 | 59 | 654 | 121 | 661 | 1.70e-59 | 215 |
MS.gene069796.t1 | AT2G27110 | 26.298 | 597 | 366 | 15 | 63 | 655 | 108 | 634 | 5.01e-54 | 200 |
MS.gene069796.t1 | AT2G27110 | 26.298 | 597 | 366 | 15 | 63 | 655 | 108 | 634 | 5.01e-54 | 200 |
MS.gene069796.t1 | AT2G27110 | 27.308 | 509 | 313 | 11 | 149 | 655 | 36 | 489 | 1.42e-53 | 197 |
MS.gene069796.t1 | AT1G76320 | 25.000 | 644 | 391 | 18 | 19 | 656 | 41 | 598 | 3.90e-49 | 183 |
MS.gene069796.t1 | AT1G76320 | 24.457 | 691 | 429 | 19 | 19 | 703 | 41 | 644 | 1.04e-48 | 183 |
MS.gene069796.t1 | AT1G76320 | 24.457 | 691 | 429 | 19 | 19 | 703 | 41 | 644 | 1.04e-48 | 183 |
MS.gene069796.t1 | AT3G06250 | 26.395 | 466 | 283 | 10 | 135 | 597 | 295 | 703 | 1.10e-48 | 183 |
MS.gene069796.t1 | AT3G06250 | 26.395 | 466 | 283 | 10 | 135 | 597 | 295 | 703 | 1.10e-48 | 183 |
MS.gene069796.t1 | AT3G06250 | 26.395 | 466 | 283 | 10 | 135 | 597 | 295 | 703 | 1.10e-48 | 183 |
MS.gene069796.t1 | AT1G76320 | 24.457 | 691 | 429 | 19 | 19 | 703 | 41 | 644 | 1.12e-48 | 183 |
MS.gene069796.t1 | AT3G22170 | 22.875 | 647 | 405 | 15 | 5 | 644 | 100 | 659 | 8.06e-47 | 179 |
MS.gene069796.t1 | AT3G22170 | 22.875 | 647 | 405 | 15 | 5 | 644 | 100 | 659 | 8.06e-47 | 179 |
MS.gene069796.t1 | AT4G38170 | 25.290 | 431 | 264 | 11 | 171 | 598 | 24 | 399 | 3.34e-44 | 167 |
MS.gene069796.t1 | AT5G18960 | 26.539 | 471 | 280 | 12 | 134 | 597 | 316 | 727 | 1.69e-42 | 165 |
MS.gene069796.t1 | AT5G18960 | 26.539 | 471 | 280 | 12 | 134 | 597 | 316 | 727 | 1.69e-42 | 165 |
MS.gene069796.t1 | AT1G10240 | 25.220 | 567 | 346 | 17 | 43 | 595 | 102 | 604 | 3.00e-40 | 157 |
MS.gene069796.t1 | AT1G10240 | 25.220 | 567 | 346 | 17 | 43 | 595 | 102 | 604 | 3.00e-40 | 157 |
MS.gene069796.t1 | AT5G28530 | 23.934 | 610 | 372 | 16 | 5 | 596 | 84 | 619 | 8.76e-39 | 153 |
MS.gene069796.t1 | AT5G28530 | 23.770 | 610 | 369 | 17 | 5 | 596 | 84 | 615 | 7.16e-38 | 150 |
MS.gene069796.t1 | AT5G28530 | 23.770 | 610 | 369 | 17 | 5 | 596 | 84 | 615 | 7.16e-38 | 150 |
MS.gene069796.t1 | AT2G32250 | 23.824 | 680 | 388 | 18 | 5 | 679 | 68 | 622 | 1.51e-37 | 150 |
MS.gene069796.t1 | AT2G32250 | 23.824 | 680 | 388 | 18 | 5 | 679 | 68 | 622 | 1.70e-37 | 150 |
MS.gene069796.t1 | AT2G32250 | 23.824 | 680 | 388 | 18 | 5 | 679 | 68 | 622 | 1.70e-37 | 150 |
MS.gene069796.t1 | AT2G32250 | 23.824 | 680 | 388 | 18 | 5 | 679 | 68 | 622 | 2.14e-37 | 150 |
MS.gene069796.t1 | AT2G32250 | 23.824 | 680 | 388 | 18 | 5 | 679 | 68 | 622 | 2.14e-37 | 150 |
MS.gene069796.t1 | AT2G32250 | 23.824 | 680 | 388 | 18 | 5 | 679 | 68 | 622 | 2.14e-37 | 150 |
MS.gene069796.t1 | AT2G32250 | 23.824 | 680 | 388 | 18 | 5 | 679 | 27 | 581 | 2.28e-37 | 149 |
MS.gene069796.t1 | AT2G32250 | 23.824 | 680 | 388 | 18 | 5 | 679 | 27 | 581 | 2.79e-37 | 149 |
MS.gene069796.t1 | AT1G80010 | 23.693 | 612 | 371 | 21 | 4 | 598 | 129 | 661 | 5.23e-34 | 139 |
MS.gene069796.t1 | AT1G52520 | 21.906 | 598 | 395 | 14 | 2 | 598 | 112 | 638 | 1.05e-31 | 132 |
MS.gene069796.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 155 | 419 | 163 | 426 | 1.11e-27 | 119 |
MS.gene069796.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 527 | 657 | 495 | 615 | 9.21e-13 | 72.4 |
MS.gene069796.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 155 | 419 | 106 | 369 | 1.22e-27 | 119 |
MS.gene069796.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 527 | 657 | 438 | 558 | 9.37e-13 | 72.0 |
MS.gene069796.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 155 | 419 | 163 | 426 | 1.31e-27 | 119 |
MS.gene069796.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 527 | 657 | 495 | 615 | 9.54e-13 | 72.0 |
MS.gene069796.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 155 | 419 | 163 | 426 | 1.31e-27 | 119 |
MS.gene069796.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 527 | 657 | 495 | 615 | 9.54e-13 | 72.0 |
MS.gene069796.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 155 | 419 | 177 | 440 | 1.45e-27 | 119 |
MS.gene069796.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 527 | 657 | 509 | 629 | 1.07e-12 | 72.0 |
MS.gene069796.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 155 | 419 | 163 | 426 | 1.58e-27 | 119 |
MS.gene069796.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 527 | 657 | 495 | 615 | 9.96e-13 | 72.0 |
MS.gene069796.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 155 | 419 | 163 | 426 | 1.58e-27 | 119 |
MS.gene069796.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 527 | 657 | 495 | 615 | 9.96e-13 | 72.0 |
MS.gene069796.t1 | AT5G28530 | 21.500 | 600 | 336 | 19 | 5 | 596 | 84 | 556 | 1.90e-19 | 93.2 |
MS.gene069796.t1 | AT5G28530 | 21.333 | 600 | 333 | 20 | 5 | 596 | 84 | 552 | 1.03e-18 | 90.9 |
Find 107 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCATGCTGAGTTGGACTTTA+AGG | 0.133287 | 6.2:+72109734 | MS.gene069796:CDS |
TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 6.2:+72109425 | MS.gene069796:CDS |
AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 6.2:-72110560 | None:intergenic |
CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 6.2:+72109692 | MS.gene069796:CDS |
CAACAAGATTATGCTCTATT+TGG | 0.198611 | 6.2:+72108641 | MS.gene069796:CDS |
TTCATTTCAGCTGCCTTTCT+TGG | 0.201003 | 6.2:+72109144 | MS.gene069796:intron |
CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 6.2:+72109177 | MS.gene069796:CDS |
TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 6.2:-72109271 | None:intergenic |
TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 6.2:-72110554 | None:intergenic |
AATCAGATTTCGACTACAAT+TGG | 0.318540 | 6.2:+72109466 | MS.gene069796:CDS |
TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 6.2:+72110406 | MS.gene069796:CDS |
GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 6.2:-72108691 | None:intergenic |
GGTTTCGAATGTTGATGTTT+TGG | 0.354913 | 6.2:+72109989 | MS.gene069796:CDS |
ACTAGCCTGGTCTGTGTATA+TGG | 0.360230 | 6.2:-72109289 | None:intergenic |
TATGCATTGGTCTTCAGTTT+GGG | 0.370760 | 6.2:+72109566 | MS.gene069796:CDS |
CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 6.2:+72110398 | MS.gene069796:CDS |
AACAATAAATATCGGCCATT+AGG | 0.388497 | 6.2:+72108698 | MS.gene069796:CDS |
ACCGAACAAACAATAAATAT+CGG | 0.389395 | 6.2:+72108690 | MS.gene069796:CDS |
GTATGCATTGGTCTTCAGTT+TGG | 0.392120 | 6.2:+72109565 | MS.gene069796:CDS |
GTCTTTAGTGCCAACATTCA+TGG | 0.395146 | 6.2:-72110282 | None:intergenic |
AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 6.2:+72110546 | MS.gene069796:CDS |
TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 6.2:-72110536 | None:intergenic |
TTCCTTCAAATACTATTATG+AGG | 0.399583 | 6.2:+72109866 | MS.gene069796:CDS |
GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 6.2:+72110431 | MS.gene069796:CDS |
TTCTCGTACTCAACAAGAAC+TGG | 0.403658 | 6.2:-72108161 | None:intergenic |
CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 6.2:+72110114 | MS.gene069796:CDS |
GATTATGATCTTCAAACCTT+GGG | 0.413114 | 6.2:-72110037 | None:intergenic |
GGGTTGTCACAGTCGACATT+AGG | 0.419786 | 6.2:+72110072 | MS.gene069796:CDS |
CGATTATGATCTTCAAACCT+TGG | 0.425681 | 6.2:-72110038 | None:intergenic |
CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 6.2:+72108338 | MS.gene069796:CDS |
AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 6.2:+72108220 | MS.gene069796:CDS |
TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 6.2:-72109282 | None:intergenic |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 6.2:+72108203 | MS.gene069796:CDS |
CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 6.2:-72110215 | None:intergenic |
CGTTATGCTTGTAACAAAGA+AGG | 0.449439 | 6.2:+72108086 | MS.gene069796:CDS |
GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 6.2:+72108368 | MS.gene069796:CDS |
TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 6.2:+72109356 | MS.gene069796:CDS |
GGCCTACTTCGGACTTTAAG+TGG | 0.458978 | 6.2:+72109520 | MS.gene069796:CDS |
ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 6.2:+72110115 | MS.gene069796:CDS |
ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 6.2:+72108052 | MS.gene069796:CDS |
CTCAAGTAGGACAAATGCTC+TGG | 0.471355 | 6.2:-72108308 | None:intergenic |
GAAGTGATGGGTCAAGGAGT+TGG | 0.484292 | 6.2:+72108413 | MS.gene069796:CDS |
CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 6.2:-72109868 | None:intergenic |
TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 6.2:-72108197 | None:intergenic |
TCTAATGACAACTCGTCAAA+AGG | 0.488137 | 6.2:+72108481 | MS.gene069796:CDS |
CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 6.2:+72108046 | MS.gene069796:CDS |
TATGAGGAGGACACAACAAA+AGG | 0.490908 | 6.2:+72109882 | MS.gene069796:CDS |
ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 6.2:-72109157 | None:intergenic |
CTGTCTATGAACCATCTGTT+GGG | 0.491412 | 6.2:+72110507 | MS.gene069796:CDS |
ATCAGATTTCGACTACAATT+GGG | 0.491708 | 6.2:+72109467 | MS.gene069796:CDS |
CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 6.2:+72108494 | MS.gene069796:CDS |
ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 6.2:+72109706 | MS.gene069796:CDS |
GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 6.2:-72109786 | None:intergenic |
GAGAACATCTTATGAAGTGA+TGG | 0.499875 | 6.2:+72108400 | MS.gene069796:CDS |
TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 6.2:-72108586 | None:intergenic |
AAATGCTCTGGTTTATGTAA+TGG | 0.504865 | 6.2:-72108296 | None:intergenic |
CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 6.2:+72109553 | MS.gene069796:CDS |
ATCATAATCGACTTGATGAA+AGG | 0.507955 | 6.2:+72110051 | MS.gene069796:CDS |
TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 6.2:-72108452 | None:intergenic |
GAGGGATAATCATGCTGAGT+TGG | 0.508852 | 6.2:+72109725 | MS.gene069796:CDS |
ATTGGTCTTCAGTTTGGGTG+AGG | 0.509410 | 6.2:+72109571 | MS.gene069796:CDS |
TGTCTATAAGATATATAAGT+GGG | 0.514682 | 6.2:+72108256 | MS.gene069796:CDS |
GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 6.2:-72110031 | None:intergenic |
TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 6.2:-72109674 | None:intergenic |
TCATAATCGACTTGATGAAA+GGG | 0.526860 | 6.2:+72110052 | MS.gene069796:CDS |
CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 6.2:-72109863 | None:intergenic |
ACTTCAACAACGCACTAGCC+TGG | 0.534735 | 6.2:-72109302 | None:intergenic |
TAACAAAGAAGGTTTCAAGA+AGG | 0.538422 | 6.2:+72108097 | MS.gene069796:CDS |
AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 6.2:-72109669 | None:intergenic |
ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 6.2:+72109883 | MS.gene069796:CDS |
AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 6.2:+72108098 | MS.gene069796:CDS |
CTGAAATCCACCATGAATGT+TGG | 0.557140 | 6.2:+72110272 | MS.gene069796:CDS |
AATGAAGCTCTCTCGAAACC+AGG | 0.565261 | 6.2:+72108548 | MS.gene069796:CDS |
GCTGTCTATGAACCATCTGT+TGG | 0.568181 | 6.2:+72110506 | MS.gene069796:CDS |
GTGATGGGTCAAGGAGTTGG+AGG | 0.568802 | 6.2:+72108416 | MS.gene069796:CDS |
TACACGTGTTTGCGCAGATG+CGG | 0.571672 | 6.2:+72110358 | MS.gene069796:CDS |
ATGTCTATAAGATATATAAG+TGG | 0.572287 | 6.2:+72108255 | MS.gene069796:CDS |
GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 6.2:-72109787 | None:intergenic |
TTTGGTGCAGTCCCAACAGA+TGG | 0.581566 | 6.2:-72110518 | None:intergenic |
TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 6.2:-72109808 | None:intergenic |
TCTTATGAAGTGATGGGTCA+AGG | 0.589029 | 6.2:+72108407 | MS.gene069796:CDS |
TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 6.2:+72110399 | MS.gene069796:CDS |
ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 6.2:+72110394 | MS.gene069796:CDS |
TTGAAGAAAACCTTTCCCCA+AGG | 0.594796 | 6.2:+72110021 | MS.gene069796:CDS |
GACAACTCGTCAAAAGGAGA+TGG | 0.599038 | 6.2:+72108487 | MS.gene069796:CDS |
TTGATATCGTTGTGCTTGAG+TGG | 0.601464 | 6.2:-72110306 | None:intergenic |
AGAACATCTTATGAAGTGAT+GGG | 0.601988 | 6.2:+72108401 | MS.gene069796:CDS |
AACTCGTCAAAAGGAGATGG+TGG | 0.603142 | 6.2:+72108490 | MS.gene069796:CDS |
ACGTGTTTGCGCAGATGCGG+AGG | 0.605934 | 6.2:+72110361 | MS.gene069796:CDS |
ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 6.2:+72109784 | MS.gene069796:CDS |
CTTCAAATACTATTATGAGG+AGG | 0.607664 | 6.2:+72109869 | MS.gene069796:CDS |
AGAACTGGACTGTCACATGT+TGG | 0.620791 | 6.2:-72108146 | None:intergenic |
AGCCACTTAAAGTCCGAAGT+AGG | 0.621799 | 6.2:-72109522 | None:intergenic |
GGGTCAAGGAGTTGGAGGCA+CGG | 0.621882 | 6.2:+72108421 | MS.gene069796:CDS |
TTCTCGAAATGATCTCAAGT+AGG | 0.625789 | 6.2:-72108321 | None:intergenic |
ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 6.2:-72110036 | None:intergenic |
GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 6.2:+72109357 | MS.gene069796:CDS |
TTTAGTGCCAACATTCATGG+TGG | 0.641441 | 6.2:-72110279 | None:intergenic |
CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 6.2:+72109707 | MS.gene069796:CDS |
GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 6.2:-72110257 | None:intergenic |
TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 6.2:-72109828 | None:intergenic |
GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 6.2:+72110383 | MS.gene069796:CDS |
CATGTCGACATAAGAAACCC+CGG | 0.663279 | 6.2:-72110133 | None:intergenic |
TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 6.2:+72110116 | MS.gene069796:CDS |
ATGTTGATAATGATAATGAG+AGG | 0.683310 | 6.2:+72109967 | MS.gene069796:CDS |
TCAAACCATATACACAGACC+AGG | 0.683597 | 6.2:+72109284 | MS.gene069796:CDS |
TGTTGATAATGATAATGAGA+GGG | 0.689129 | 6.2:+72109968 | MS.gene069796:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGTCTATAAGATATATAAG+TGG | + | chr6.2:72108255-72108274 | MS.gene069796:CDS | 20.0% |
!! | CAATTCACAAAATAAGAAAT+CGG | + | chr6.2:72108046-72108065 | MS.gene069796:CDS | 20.0% |
!! | TGTCTATAAGATATATAAGT+GGG | + | chr6.2:72108256-72108275 | MS.gene069796:CDS | 20.0% |
!!! | AATTTAATGTTCTGGTTTAT+GGG | + | chr6.2:72108873-72108892 | MS.gene069796:intron | 20.0% |
!!! | ATGATGAAAAACTGTTTTAA+TGG | + | chr6.2:72109495-72109514 | MS.gene069796:CDS | 20.0% |
!!! | TGAATGTTTATATTGATTGA+AGG | + | chr6.2:72108845-72108864 | MS.gene069796:intron | 20.0% |
! | AAAACACCTTGAAAAACATT+CGG | - | chr6.2:72109333-72109352 | None:intergenic | 25.0% |
! | ACAAAATAAGAAATCGGATA+AGG | + | chr6.2:72108052-72108071 | MS.gene069796:CDS | 25.0% |
! | ACCGAACAAACAATAAATAT+CGG | + | chr6.2:72108690-72108709 | MS.gene069796:CDS | 25.0% |
! | AGTACAAAATACTAACCTAA+TGG | - | chr6.2:72108716-72108735 | None:intergenic | 25.0% |
! | CATAATAGTATTTGAAGGAA+AGG | - | chr6.2:72109866-72109885 | None:intergenic | 25.0% |
! | CTTTAGTCATTTCAACATTA+TGG | + | chr6.2:72109692-72109711 | MS.gene069796:CDS | 25.0% |
! | TGAAATTTGAATGAATGTTC+TGG | + | chr6.2:72108763-72108782 | MS.gene069796:intron | 25.0% |
! | TGAATAAATGAAAAGCAAGA+TGG | - | chr6.2:72109831-72109850 | None:intergenic | 25.0% |
! | TTCCTTCAAATACTATTATG+AGG | + | chr6.2:72109866-72109885 | MS.gene069796:CDS | 25.0% |
! | TTTCGATGAGTTAACTAATT+TGG | + | chr6.2:72109425-72109444 | MS.gene069796:CDS | 25.0% |
!! | AGGTTTAGAATTTAATGTTC+TGG | + | chr6.2:72108865-72108884 | MS.gene069796:intron | 25.0% |
!! | TGTTGTATTTTGTTCTGATT+TGG | + | chr6.2:72109121-72109140 | MS.gene069796:intron | 25.0% |
!!! | ATGTTGATAATGATAATGAG+AGG | + | chr6.2:72109967-72109986 | MS.gene069796:CDS | 25.0% |
!!! | CTTATTTTGTGAATTGTTCT+TGG | - | chr6.2:72108042-72108061 | None:intergenic | 25.0% |
!!! | GAATTTAATGTTCTGGTTTA+TGG | + | chr6.2:72108872-72108891 | MS.gene069796:intron | 25.0% |
!!! | GCTTTAATAAATTCTAAAGC+TGG | + | chr6.2:72108368-72108387 | MS.gene069796:CDS | 25.0% |
!!! | TGAAAAACTGTTTTAATGGA+AGG | + | chr6.2:72109499-72109518 | MS.gene069796:CDS | 25.0% |
!!! | TGTTGATAATGATAATGAGA+GGG | + | chr6.2:72109968-72109987 | MS.gene069796:CDS | 25.0% |
AAACACATATGATCTTTCCA+TGG | - | chr6.2:72108936-72108955 | None:intergenic | 30.0% | |
AACAAAGAAGGTTTCAAGAA+GGG | + | chr6.2:72108098-72108117 | MS.gene069796:CDS | 30.0% | |
AACAATAAATATCGGCCATT+AGG | + | chr6.2:72108698-72108717 | MS.gene069796:CDS | 30.0% | |
AAGAAAGACCAAATCCAATT+AGG | + | chr6.2:72110546-72110565 | MS.gene069796:CDS | 30.0% | |
AATCAGATTTCGACTACAAT+TGG | + | chr6.2:72109466-72109485 | MS.gene069796:CDS | 30.0% | |
AGAACATCTTATGAAGTGAT+GGG | + | chr6.2:72108401-72108420 | MS.gene069796:CDS | 30.0% | |
ATCAGATTTCGACTACAATT+GGG | + | chr6.2:72109467-72109486 | MS.gene069796:CDS | 30.0% | |
ATGATTGTCAAAACCAAGAA+AGG | - | chr6.2:72109160-72109179 | None:intergenic | 30.0% | |
ATTATGATCTTCAAACCTTG+GGG | - | chr6.2:72110039-72110058 | None:intergenic | 30.0% | |
CAACAAGATTATGCTCTATT+TGG | + | chr6.2:72108641-72108660 | MS.gene069796:CDS | 30.0% | |
CTCCTCATAATAGTATTTGA+AGG | - | chr6.2:72109871-72109890 | None:intergenic | 30.0% | |
CTGGTATATGTGTGTTAATT+TGG | + | chr6.2:72108802-72108821 | MS.gene069796:intron | 30.0% | |
CTTCAAATACTATTATGAGG+AGG | + | chr6.2:72109869-72109888 | MS.gene069796:CDS | 30.0% | |
GAGAATGCAAAGAAAAATCT+CGG | + | chr6.2:72109381-72109400 | MS.gene069796:CDS | 30.0% | |
GATTATGATCTTCAAACCTT+GGG | - | chr6.2:72110040-72110059 | None:intergenic | 30.0% | |
GCCGATATTTATTGTTTGTT+CGG | - | chr6.2:72108694-72108713 | None:intergenic | 30.0% | |
TAAAGAAAAACCAGAGGAAA+GGG | + | chr6.2:72108187-72108206 | MS.gene069796:CDS | 30.0% | |
TAAAGAATCGAACAAGTGAA+TGG | - | chr6.2:72109677-72109696 | None:intergenic | 30.0% | |
TAACAAAGAAGGTTTCAAGA+AGG | + | chr6.2:72108097-72108116 | MS.gene069796:CDS | 30.0% | |
TGGATATCATAGTAAAAACC+TGG | - | chr6.2:72108569-72108588 | None:intergenic | 30.0% | |
TGGTGTATACTTGTTTACTA+CGG | - | chr6.2:72109811-72109830 | None:intergenic | 30.0% | |
TTCTTTGACCTAATTGGATT+TGG | - | chr6.2:72110557-72110576 | None:intergenic | 30.0% | |
TTTAAGTCCGAAAATCGAAA+AGG | - | chr6.2:72108455-72108474 | None:intergenic | 30.0% | |
TTTCTATTTACACAGCACAA+TGG | + | chr6.2:72109080-72109099 | MS.gene069796:intron | 30.0% | |
! | AAATGCTCTGGTTTATGTAA+TGG | - | chr6.2:72108299-72108318 | None:intergenic | 30.0% |
! | AGCTGGAATATATTTGAAGT+TGG | + | chr6.2:72108220-72108239 | MS.gene069796:CDS | 30.0% |
! | CAAAGTTTTCACAATTGAGA+AGG | + | chr6.2:72109926-72109945 | MS.gene069796:CDS | 30.0% |
! | GAATCTTCCTTTTCGATTTT+CGG | + | chr6.2:72108445-72108464 | MS.gene069796:CDS | 30.0% |
! | GCATCTGAAATATTTCTCAA+CGG | + | chr6.2:72110383-72110402 | MS.gene069796:CDS | 30.0% |
! | TATGGTTTGAGGTTTCTTAT+TGG | - | chr6.2:72109274-72109293 | None:intergenic | 30.0% |
! | TCAATTCCGAATGTTTTTCA+AGG | + | chr6.2:72109324-72109343 | MS.gene069796:CDS | 30.0% |
! | TGAGGCTTTAACAATTTAAG+CGG | + | chr6.2:72110655-72110674 | MS.gene069796:intron | 30.0% |
! | TTTGGTCTTTCTTTGAACTT+TGG | - | chr6.2:72110539-72110558 | None:intergenic | 30.0% |
!! | ACATGTTTTCAAGATTTTGG+AGG | + | chr6.2:72110151-72110170 | MS.gene069796:CDS | 30.0% |
!! | ACTGCTTTTGAAGACTTAAA+AGG | - | chr6.2:72110485-72110504 | None:intergenic | 30.0% |
!! | ATCATAATCGACTTGATGAA+AGG | + | chr6.2:72110051-72110070 | MS.gene069796:CDS | 30.0% |
!! | ATGTTCTGGTTTAGAATTGA+AGG | + | chr6.2:72108777-72108796 | MS.gene069796:intron | 30.0% |
!! | GAGGAGTTTCTTATTTCTAA+AGG | + | chr6.2:72110431-72110450 | MS.gene069796:CDS | 30.0% |
!! | TCATAATCGACTTGATGAAA+GGG | + | chr6.2:72110052-72110071 | MS.gene069796:CDS | 30.0% |
!! | TCGACATGTTTTCAAGATTT+TGG | + | chr6.2:72110148-72110167 | MS.gene069796:CDS | 30.0% |
!!! | AAGACATAGCCAGTATTTTT+TGG | + | chr6.2:72108603-72108622 | MS.gene069796:CDS | 30.0% |
!!! | AGACATAGCCAGTATTTTTT+GGG | + | chr6.2:72108604-72108623 | MS.gene069796:CDS | 30.0% |
!!! | CTGCACAATATGTTTTAAAG+CGG | + | chr6.2:72110216-72110235 | MS.gene069796:CDS | 30.0% |
!!! | GTTTTTCAAGGTGTTTTTCA+TGG | + | chr6.2:72109336-72109355 | MS.gene069796:CDS | 30.0% |
ACATTATGGTTCAGAGAATG+AGG | + | chr6.2:72109706-72109725 | MS.gene069796:CDS | 35.0% | |
CATAAATTCCAAGGCAAGAT+AGG | - | chr6.2:72108903-72108922 | None:intergenic | 35.0% | |
CATTATGGTTCAGAGAATGA+GGG | + | chr6.2:72109707-72109726 | MS.gene069796:CDS | 35.0% | |
CGAGAAGTAAATGAAGTTCA+AGG | + | chr6.2:72108338-72108357 | MS.gene069796:CDS | 35.0% | |
CGATTATGATCTTCAAACCT+TGG | - | chr6.2:72110041-72110060 | None:intergenic | 35.0% | |
CGTTATGCTTGTAACAAAGA+AGG | + | chr6.2:72108086-72108105 | MS.gene069796:CDS | 35.0% | |
CTAAAGAAAAACCAGAGGAA+AGG | + | chr6.2:72108186-72108205 | MS.gene069796:CDS | 35.0% | |
CTCATTCAAATCGTATGCAT+TGG | + | chr6.2:72109553-72109572 | MS.gene069796:CDS | 35.0% | |
GAAAGCTAAAGAAAAACCAG+AGG | + | chr6.2:72108181-72108200 | MS.gene069796:CDS | 35.0% | |
GAAGCAAAAGAAAGATGATG+AGG | + | chr6.2:72110637-72110656 | MS.gene069796:intron | 35.0% | |
GACAGAAATTCCTTATAGCT+CGG | + | chr6.2:72110612-72110631 | MS.gene069796:intron | 35.0% | |
GAGAACATCTTATGAAGTGA+TGG | + | chr6.2:72108400-72108419 | MS.gene069796:CDS | 35.0% | |
GTCTGCTTAATCCTAAAAAC+AGG | + | chr6.2:72108123-72108142 | MS.gene069796:CDS | 35.0% | |
TCTAATGACAACTCGTCAAA+AGG | + | chr6.2:72108481-72108500 | MS.gene069796:CDS | 35.0% | |
TGTACAGAGCATAAATTCCA+AGG | - | chr6.2:72108912-72108931 | None:intergenic | 35.0% | |
TTCTCGAAATGATCTCAAGT+AGG | - | chr6.2:72108324-72108343 | None:intergenic | 35.0% | |
! | CATCGTAAGAGTGTGTTATT+TGG | + | chr6.2:72109177-72109196 | MS.gene069796:CDS | 35.0% |
! | GAGGCTTTAACAATTTAAGC+GGG | + | chr6.2:72110656-72110675 | MS.gene069796:intron | 35.0% |
! | GGTTTCGAATGTTGATGTTT+TGG | + | chr6.2:72109989-72110008 | MS.gene069796:CDS | 35.0% |
! | TCTTTCAATGCTTTTCTTCG+TGG | + | chr6.2:72109636-72109655 | MS.gene069796:CDS | 35.0% |
! | TGGTTTAGAATTGAAGGTTC+TGG | + | chr6.2:72108783-72108802 | MS.gene069796:intron | 35.0% |
! | TTTTAATGGAAGGCCTACTT+CGG | + | chr6.2:72109509-72109528 | MS.gene069796:CDS | 35.0% |
! | TTTTTCATGGTCTTTGCTCA+TGG | + | chr6.2:72109349-72109368 | MS.gene069796:CDS | 35.0% |
!! | CGCTTTAAAACATATTGTGC+AGG | - | chr6.2:72110218-72110237 | None:intergenic | 35.0% |
!! | TATGCATTGGTCTTCAGTTT+GGG | + | chr6.2:72109566-72109585 | MS.gene069796:CDS | 35.0% |
!! | TTCAAGATTTTGGAGGTCTT+AGG | + | chr6.2:72110158-72110177 | MS.gene069796:CDS | 35.0% |
!!! | AGACATCAGCTACTTTTGAT+TGG | + | chr6.2:72109220-72109239 | MS.gene069796:CDS | 35.0% |
!!! | CACAATATGTTTTAAAGCGG+TGG | + | chr6.2:72110219-72110238 | MS.gene069796:CDS | 35.0% |
AATCGAACAAGTGAATGGTC+TGG | - | chr6.2:72109672-72109691 | None:intergenic | 40.0% | |
ACCTATGATCTTTGCATAGC+TGG | - | chr6.2:72109030-72109049 | None:intergenic | 40.0% | |
AGTCGCTTCTTTGACCTAAT+TGG | - | chr6.2:72110563-72110582 | None:intergenic | 40.0% | |
ATGAGGAGGACACAACAAAA+GGG | + | chr6.2:72109883-72109902 | MS.gene069796:CDS | 40.0% | |
ATGTCGTATGTTTGAGAACC+GGG | + | chr6.2:72110115-72110134 | MS.gene069796:CDS | 40.0% | |
ATTTATGCTCTGTACAGCCA+TGG | + | chr6.2:72108916-72108935 | MS.gene069796:intron | 40.0% | |
ATTTCTCAACGGTGTTCTTG+AGG | + | chr6.2:72110394-72110413 | MS.gene069796:CDS | 40.0% | |
CATGTCGTATGTTTGAGAAC+CGG | + | chr6.2:72110114-72110133 | MS.gene069796:CDS | 40.0% | |
CTGAAATCCACCATGAATGT+TGG | + | chr6.2:72110272-72110291 | MS.gene069796:CDS | 40.0% | |
CTGTCTATGAACCATCTGTT+GGG | + | chr6.2:72110507-72110526 | MS.gene069796:CDS | 40.0% | |
GATTTCAGCTTATCGACAGA+CGG | - | chr6.2:72110260-72110279 | None:intergenic | 40.0% | |
GTCTTTAGTGCCAACATTCA+TGG | - | chr6.2:72110285-72110304 | None:intergenic | 40.0% | |
TATGAGGAGGACACAACAAA+AGG | + | chr6.2:72109882-72109901 | MS.gene069796:CDS | 40.0% | |
TCAAACCATATACACAGACC+AGG | + | chr6.2:72109284-72109303 | MS.gene069796:CDS | 40.0% | |
TCCAGCTATGCAAAGATCAT+AGG | + | chr6.2:72109026-72109045 | MS.gene069796:intron | 40.0% | |
TCCATCTGCCCAAAAAATAC+TGG | - | chr6.2:72108615-72108634 | None:intergenic | 40.0% | |
TGGTCTGTGTATATGGTTTG+AGG | - | chr6.2:72109285-72109304 | None:intergenic | 40.0% | |
TTCATTTCAGCTGCCTTTCT+TGG | + | chr6.2:72109144-72109163 | MS.gene069796:intron | 40.0% | |
TTCTCGTACTCAACAAGAAC+TGG | - | chr6.2:72108164-72108183 | None:intergenic | 40.0% | |
TTGAAGAAAACCTTTCCCCA+AGG | + | chr6.2:72110021-72110040 | MS.gene069796:CDS | 40.0% | |
TTGATATCGTTGTGCTTGAG+TGG | - | chr6.2:72110309-72110328 | None:intergenic | 40.0% | |
TTTAGTGCCAACATTCATGG+TGG | - | chr6.2:72110282-72110301 | None:intergenic | 40.0% | |
TTTGCTTCTTCCGAGCTATA+AGG | - | chr6.2:72110625-72110644 | None:intergenic | 40.0% | |
! | TCATGCTGAGTTGGACTTTA+AGG | + | chr6.2:72109734-72109753 | MS.gene069796:CDS | 40.0% |
!! | AAGATTTTGGAGGTCTTAGG+TGG | + | chr6.2:72110161-72110180 | MS.gene069796:CDS | 40.0% |
!! | GTATGCATTGGTCTTCAGTT+TGG | + | chr6.2:72109565-72109584 | MS.gene069796:CDS | 40.0% |
!! | TCACATGTTGGCCTGTTTTT+AGG | - | chr6.2:72108137-72108156 | None:intergenic | 40.0% |
!! | TCTTATGAAGTGATGGGTCA+AGG | + | chr6.2:72108407-72108426 | MS.gene069796:CDS | 40.0% |
AACTCGTCAAAAGGAGATGG+TGG | + | chr6.2:72108490-72108509 | MS.gene069796:CDS | 45.0% | |
AATGAAGCTCTCTCGAAACC+AGG | + | chr6.2:72108548-72108567 | MS.gene069796:CDS | 45.0% | |
AGAACTGGACTGTCACATGT+TGG | - | chr6.2:72108149-72108168 | None:intergenic | 45.0% | |
AGCCACTTAAAGTCCGAAGT+AGG | - | chr6.2:72109525-72109544 | None:intergenic | 45.0% | |
ATCCCAACAGTCAGCTTATG+CGG | + | chr6.2:72109784-72109803 | MS.gene069796:CDS | 45.0% | |
CATGTCGACATAAGAAACCC+CGG | - | chr6.2:72110136-72110155 | None:intergenic | 45.0% | |
CTCAAGTAGGACAAATGCTC+TGG | - | chr6.2:72108311-72108330 | None:intergenic | 45.0% | |
GAAAAACCAGAGGAAAGGGT+TGG | + | chr6.2:72108191-72108210 | MS.gene069796:CDS | 45.0% | |
GACAACTCGTCAAAAGGAGA+TGG | + | chr6.2:72108487-72108506 | MS.gene069796:CDS | 45.0% | |
GAGGGATAATCATGCTGAGT+TGG | + | chr6.2:72109725-72109744 | MS.gene069796:CDS | 45.0% | |
GATCTTCAAACCTTGGGGAA+AGG | - | chr6.2:72110034-72110053 | None:intergenic | 45.0% | |
GCTGTCTATGAACCATCTGT+TGG | + | chr6.2:72110506-72110525 | MS.gene069796:CDS | 45.0% | |
TGTCGTATGTTTGAGAACCG+GGG | + | chr6.2:72110116-72110135 | MS.gene069796:CDS | 45.0% | |
TGTCTTCTGCAGCATCAACT+TGG | - | chr6.2:72108589-72108608 | None:intergenic | 45.0% | |
TGTTCTTGAGGCAGGGAAAA+AGG | + | chr6.2:72110406-72110425 | MS.gene069796:CDS | 45.0% | |
TTACAACCAACCCTTTCCTC+TGG | - | chr6.2:72108200-72108219 | None:intergenic | 45.0% | |
! | ACTAGCCTGGTCTGTGTATA+TGG | - | chr6.2:72109292-72109311 | None:intergenic | 45.0% |
! | GTGAGGTCACATTTTACAGC+TGG | + | chr6.2:72109588-72109607 | MS.gene069796:CDS | 45.0% |
!! | ATTGGTCTTCAGTTTGGGTG+AGG | + | chr6.2:72109571-72109590 | MS.gene069796:CDS | 45.0% |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | + | chr6.2:72108203-72108222 | MS.gene069796:CDS | 45.0% |
!!! | GCCAGTATTTTTTGGGCAGA+TGG | + | chr6.2:72108611-72108630 | MS.gene069796:CDS | 45.0% |
ACTTCAACAACGCACTAGCC+TGG | - | chr6.2:72109305-72109324 | None:intergenic | 50.0% | |
GACCGCATAAGCTGACTGTT+GGG | - | chr6.2:72109789-72109808 | None:intergenic | 50.0% | |
GGCCTACTTCGGACTTTAAG+TGG | + | chr6.2:72109520-72109539 | MS.gene069796:CDS | 50.0% | |
GGGTTGTCACAGTCGACATT+AGG | + | chr6.2:72110072-72110091 | MS.gene069796:CDS | 50.0% | |
GGTCTTTGCTCATGGCACAT+GGG | + | chr6.2:72109357-72109376 | MS.gene069796:CDS | 50.0% | |
TACACGTGTTTGCGCAGATG+CGG | + | chr6.2:72110358-72110377 | MS.gene069796:CDS | 50.0% | |
TCAACGGTGTTCTTGAGGCA+GGG | + | chr6.2:72110399-72110418 | MS.gene069796:CDS | 50.0% | |
TGGGTGATCCTATCTTGCCT+TGG | + | chr6.2:72108892-72108911 | MS.gene069796:intron | 50.0% | |
TGGTCTTTGCTCATGGCACA+TGG | + | chr6.2:72109356-72109375 | MS.gene069796:CDS | 50.0% | |
! | TTTGGTGCAGTCCCAACAGA+TGG | - | chr6.2:72110521-72110540 | None:intergenic | 50.0% |
!! | GAAGTGATGGGTCAAGGAGT+TGG | + | chr6.2:72108413-72108432 | MS.gene069796:CDS | 50.0% |
CTCAACGGTGTTCTTGAGGC+AGG | + | chr6.2:72110398-72110417 | MS.gene069796:CDS | 55.0% | |
GGACCGCATAAGCTGACTGT+TGG | - | chr6.2:72109790-72109809 | None:intergenic | 55.0% | |
TGAGGCAGGGAAAAAGGCAG+AGG | + | chr6.2:72110412-72110431 | MS.gene069796:CDS | 55.0% | |
! | CGTCAAAAGGAGATGGTGGC+TGG | + | chr6.2:72108494-72108513 | MS.gene069796:CDS | 55.0% |
!! | GTGATGGGTCAAGGAGTTGG+AGG | + | chr6.2:72108416-72108435 | MS.gene069796:CDS | 55.0% |
ACGTGTTTGCGCAGATGCGG+AGG | + | chr6.2:72110361-72110380 | MS.gene069796:CDS | 60.0% | |
GGGTCAAGGAGTTGGAGGCA+CGG | + | chr6.2:72108421-72108440 | MS.gene069796:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 72108029 | 72110684 | 72108029 | ID=MS.gene069796 |
chr6.2 | mRNA | 72108029 | 72110684 | 72108029 | ID=MS.gene069796.t1;Parent=MS.gene069796 |
chr6.2 | exon | 72108029 | 72108719 | 72108029 | ID=MS.gene069796.t1.exon1;Parent=MS.gene069796.t1 |
chr6.2 | CDS | 72108029 | 72108719 | 72108029 | ID=cds.MS.gene069796.t1;Parent=MS.gene069796.t1 |
chr6.2 | exon | 72109154 | 72110567 | 72109154 | ID=MS.gene069796.t1.exon2;Parent=MS.gene069796.t1 |
chr6.2 | CDS | 72109154 | 72110567 | 72109154 | ID=cds.MS.gene069796.t1;Parent=MS.gene069796.t1 |
chr6.2 | exon | 72110675 | 72110684 | 72110675 | ID=MS.gene069796.t1.exon3;Parent=MS.gene069796.t1 |
chr6.2 | CDS | 72110675 | 72110684 | 72110675 | ID=cds.MS.gene069796.t1;Parent=MS.gene069796.t1 |
Gene Sequence |
Protein sequence |