AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene069958

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069958.t1 MTR_5g015480 89.730 185 19 0 1 185 1 185 4.36e-111 339
MS.gene069958.t1 MTR_5g015480 88.462 52 6 0 753 804 178 229 1.82e-23 101
MS.gene069958.t1 MTR_0402s0040 69.500 200 56 2 36 231 2 200 5.44e-86 282
MS.gene069958.t1 MTR_0402s0040 49.682 314 98 7 416 726 200 456 1.65e-74 251
MS.gene069958.t1 MTR_6g017200 71.074 121 31 1 36 152 34 154 4.91e-50 173
MS.gene069958.t1 MTR_2g070590 69.748 119 36 0 40 158 1 119 1.13e-49 171
MS.gene069958.t1 MTR_7g113010 56.875 160 51 2 26 181 423 568 2.11e-45 172
MS.gene069958.t1 MTR_1g057920 64.228 123 40 1 27 145 1 123 6.70e-44 154
MS.gene069958.t1 MTR_6g051425 30.612 294 182 6 63 337 24 314 1.79e-41 155
MS.gene069958.t1 MTR_1g086270 79.747 79 16 0 351 429 1 79 1.04e-40 145
MS.gene069958.t1 MTR_0558s0020 30.769 247 152 4 70 297 50 296 5.00e-35 135
MS.gene069958.t1 MTR_0137s0040 68.182 88 24 1 25 108 1 88 8.49e-34 125
MS.gene069958.t1 MTR_1g070355 30.742 283 176 7 23 293 37 311 3.66e-31 129
MS.gene069958.t1 MTR_8g446020 31.694 183 124 1 116 297 74 256 4.79e-30 120
MS.gene069958.t1 MTR_6g090505 32.967 182 121 1 116 296 49 230 3.63e-27 114
MS.gene069958.t1 MTR_1g050985 80.000 60 12 0 126 185 39 98 8.90e-27 105
MS.gene069958.t1 MTR_7g074790 42.442 172 77 5 56 226 10 160 2.02e-26 108
MS.gene069958.t1 MTR_4g035820 31.939 263 166 8 48 301 66 324 2.85e-25 112
MS.gene069958.t1 MTR_4g102720 34.524 168 74 3 56 223 7 138 1.10e-22 97.8
MS.gene069958.t1 MTR_0291s0060 63.014 73 23 1 38 106 13 85 1.49e-22 93.2
MS.gene069958.t1 MTR_5g076070 27.236 246 167 5 46 285 43 282 1.80e-22 99.0
MS.gene069958.t1 MTR_7g446520 29.796 245 154 4 59 302 91 318 4.07e-22 99.0
MS.gene069958.t1 MTR_1g083640 26.991 226 146 4 62 268 57 282 3.52e-21 95.1
MS.gene069958.t1 MTR_4g067290 46.296 108 52 3 56 161 56 159 7.77e-21 92.8
MS.gene069958.t1 MTR_4g067290 46.296 108 52 3 56 161 56 159 7.89e-21 92.8
MS.gene069958.t1 MTR_4g067290 46.296 108 52 3 56 161 76 179 1.15e-20 92.8
MS.gene069958.t1 MTR_4g067290 46.296 108 52 3 56 161 74 177 1.15e-20 92.8
MS.gene069958.t1 MTR_4g067290 46.296 108 52 3 56 161 76 179 1.35e-20 92.4
MS.gene069958.t1 MTR_4g067290 46.296 108 52 3 56 161 116 219 2.77e-20 92.8
MS.gene069958.t1 MTR_5g039760 35.714 196 96 7 60 252 14 182 2.34e-19 87.0
MS.gene069958.t1 MTR_2g098920 41.379 116 58 4 56 165 80 191 3.86e-19 88.6
MS.gene069958.t1 MTR_1g091013 67.857 56 18 0 69 124 14 69 9.23e-18 78.6
MS.gene069958.t1 MTR_6g022080 31.169 154 103 2 62 213 91 243 1.93e-17 83.2
MS.gene069958.t1 MTR_7g061980 41.176 119 66 3 50 167 4 119 1.28e-16 77.0
MS.gene069958.t1 MTR_7g446480 32.955 176 115 3 132 305 140 314 4.08e-16 80.9
MS.gene069958.t1 MTR_0337s0040 27.703 148 106 1 116 262 75 222 2.08e-15 76.6
MS.gene069958.t1 MTR_1g008290 32.653 147 93 3 108 253 3 144 2.98e-15 73.9
MS.gene069958.t1 MTR_7g446510 32.386 176 116 3 132 305 155 329 3.15e-15 78.2
MS.gene069958.t1 MTR_5g045210 39.326 89 54 0 568 656 20 108 3.71e-14 72.4
MS.gene069958.t1 MTR_3g450850 24.797 246 173 5 62 296 53 297 4.04e-14 75.1
MS.gene069958.t1 MTR_3g006370 39.048 105 62 2 56 159 50 153 8.64e-14 72.0
MS.gene069958.t1 MTR_2g099430 40.909 88 50 1 80 167 27 112 1.72e-13 68.2
MS.gene069958.t1 MTR_1g019850 30.488 164 104 3 34 194 45 201 9.75e-13 69.3
MS.gene069958.t1 MTR_2g014100 23.153 203 134 4 60 240 48 250 1.73e-12 68.6
MS.gene069958.t1 MTR_2g098880 32.414 145 92 4 42 182 47 189 1.84e-12 68.6
MS.gene069958.t1 MTR_2g098880 32.414 145 92 4 42 182 59 201 1.91e-12 68.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069958.t1 AT4G38180 33.122 631 390 9 56 657 73 700 9.89e-107 346
MS.gene069958.t1 AT4G15090 30.769 624 398 9 56 653 51 666 1.94e-91 306
MS.gene069958.t1 AT4G15090 30.769 624 398 9 56 653 51 666 1.94e-91 306
MS.gene069958.t1 AT4G15090 30.769 624 398 9 56 653 51 666 1.94e-91 306
MS.gene069958.t1 AT4G15090 30.769 624 398 9 56 653 51 666 1.94e-91 306
MS.gene069958.t1 AT4G15090 30.769 624 398 9 56 653 51 666 1.94e-91 306
MS.gene069958.t1 AT3G22170 32.033 615 349 14 60 636 74 657 3.42e-87 295
MS.gene069958.t1 AT3G22170 32.033 615 349 14 60 636 74 657 3.42e-87 295
MS.gene069958.t1 AT1G76320 31.158 613 381 14 60 648 1 596 2.68e-82 277
MS.gene069958.t1 AT1G76320 31.158 613 381 14 60 648 1 596 3.94e-82 278
MS.gene069958.t1 AT1G76320 31.158 613 381 14 60 648 1 596 3.94e-82 278
MS.gene069958.t1 AT1G76320 31.158 613 381 14 60 648 1 596 4.69e-82 278
MS.gene069958.t1 AT2G27110 30.274 621 372 13 56 649 49 635 2.29e-79 273
MS.gene069958.t1 AT2G27110 30.274 621 372 13 56 649 49 635 2.29e-79 273
MS.gene069958.t1 AT2G32250 28.237 641 375 14 60 666 1 590 1.00e-68 242
MS.gene069958.t1 AT2G32250 28.237 641 375 14 60 666 42 631 1.10e-68 242
MS.gene069958.t1 AT2G32250 28.237 641 375 14 60 666 1 590 1.16e-68 242
MS.gene069958.t1 AT2G32250 28.237 641 375 14 60 666 42 631 1.42e-68 243
MS.gene069958.t1 AT2G32250 28.237 641 375 14 60 666 42 631 1.42e-68 243
MS.gene069958.t1 AT2G32250 28.237 641 375 14 60 666 42 631 1.42e-68 243
MS.gene069958.t1 AT2G32250 28.237 641 375 14 60 666 42 631 1.44e-68 243
MS.gene069958.t1 AT2G32250 28.237 641 375 14 60 666 42 631 1.44e-68 243
MS.gene069958.t1 AT3G06250 27.316 626 383 12 47 648 181 758 1.69e-67 239
MS.gene069958.t1 AT3G06250 27.316 626 383 12 47 648 181 758 1.69e-67 239
MS.gene069958.t1 AT3G06250 27.316 626 383 12 47 648 181 758 1.69e-67 239
MS.gene069958.t1 AT5G18960 28.436 633 375 17 44 648 200 782 2.78e-67 239
MS.gene069958.t1 AT5G18960 33.051 118 65 2 41 158 28 131 3.19e-11 67.8
MS.gene069958.t1 AT5G18960 28.436 633 375 17 44 648 200 782 2.78e-67 239
MS.gene069958.t1 AT5G18960 33.051 118 65 2 41 158 28 131 3.19e-11 67.8
MS.gene069958.t1 AT2G27110 31.818 440 271 7 235 649 55 490 9.05e-67 236
MS.gene069958.t1 AT1G10240 28.120 569 375 11 49 588 41 604 4.91e-63 224
MS.gene069958.t1 AT1G10240 28.120 569 375 11 49 588 41 604 4.91e-63 224
MS.gene069958.t1 AT5G28530 27.165 589 390 15 56 611 55 637 1.47e-56 206
MS.gene069958.t1 AT5G28530 27.165 589 390 15 56 611 55 637 1.47e-56 206
MS.gene069958.t1 AT4G19990 27.422 671 397 14 61 683 26 654 3.59e-56 207
MS.gene069958.t1 AT4G19990 27.422 671 397 14 61 683 26 654 3.59e-56 207
MS.gene069958.t1 AT4G19990 27.571 671 396 14 61 683 26 654 3.68e-56 206
MS.gene069958.t1 AT4G19990 27.571 671 396 14 61 683 26 654 3.68e-56 206
MS.gene069958.t1 AT5G28530 26.981 593 390 15 56 611 55 641 5.00e-56 205
MS.gene069958.t1 AT4G19990 27.571 671 396 14 61 683 40 668 5.03e-56 206
MS.gene069958.t1 AT4G19990 27.571 671 396 14 61 683 26 654 5.04e-56 206
MS.gene069958.t1 AT1G80010 28.353 589 347 15 56 591 95 661 5.31e-52 194
MS.gene069958.t1 AT4G38170 29.737 380 234 8 240 592 27 400 1.00e-51 190
MS.gene069958.t1 AT4G19990 27.002 637 375 14 95 683 3 597 1.50e-48 183
MS.gene069958.t1 AT1G52520 27.210 577 360 17 54 591 83 638 2.13e-48 183
MS.gene069958.t1 AT5G28530 24.352 579 356 15 56 611 55 574 9.34e-38 150
MS.gene069958.t1 AT5G28530 24.185 583 356 15 56 611 55 578 4.00e-37 148
MS.gene069958.t1 AT3G59470 46.226 106 55 2 56 161 70 173 2.72e-21 94.7
MS.gene069958.t1 AT3G59470 46.226 106 55 2 56 161 70 173 2.72e-21 94.7
MS.gene069958.t1 AT3G59470 46.226 106 55 2 56 161 82 185 3.74e-21 94.4
MS.gene069958.t1 AT3G07500 38.760 129 76 2 34 160 9 136 1.42e-15 77.0
MS.gene069958.t1 AT2G43280 37.500 128 71 4 56 181 22 142 7.92e-14 71.6
MS.gene069958.t1 AT4G12850 32.540 126 78 3 56 181 11 129 3.03e-12 65.5
MS.gene069958.t1 AT2G43280 40.659 91 50 3 71 159 2 90 1.38e-11 64.3
MS.gene069958.t1 AT4G12850 34.951 103 63 2 56 158 11 109 4.09e-11 62.0

Find 137 sgRNAs with CRISPR-Local

Find 175 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCAAATAACAAACATATTT+TGG 0.063618 3.2:-6684024 MS.gene069958:CDS
CCATTGTCAGCTTCTGTTAA+AGG 0.115830 3.2:+6682152 None:intergenic
TCCAACTTGGCTTGAGAAAT+TGG 0.175914 3.2:-6682620 MS.gene069958:CDS
CACAGACAAACAATTGTTTA+TGG 0.199392 3.2:-6683884 MS.gene069958:CDS
ATTCATCAGCCAATACAATT+TGG 0.204201 3.2:+6684260 None:intergenic
TTGTTTGTCTGTGGCTATTA+AGG 0.204260 3.2:+6683894 None:intergenic
GCACAAATGATAAATGATTA+TGG 0.212778 3.2:-6683995 MS.gene069958:CDS
CACAATCCATGAAATGTTTC+TGG 0.237682 3.2:+6683719 None:intergenic
GAAATTTGCTTCGCACTAAA+AGG 0.249768 3.2:-6684150 MS.gene069958:CDS
GGTTGGGATGTAATCAAAAT+TGG 0.250331 3.2:-6682966 MS.gene069958:CDS
GATTGTGCACTTGGCATATA+AGG 0.257928 3.2:-6683703 MS.gene069958:CDS
TCCTAATCTCATTTGACATT+TGG 0.288109 3.2:+6682108 None:intergenic
ACAAATTCATGAAAATCTTT+TGG 0.298226 3.2:+6684226 None:intergenic
ATTGTATTGGCTGATGAATC+TGG 0.322531 3.2:-6684256 MS.gene069958:CDS
CATTTCATGGATTGTGCACT+TGG 0.334162 3.2:-6683712 MS.gene069958:CDS
TAGTGCGAAGCAAATTTCTA+TGG 0.349224 3.2:+6684155 None:intergenic
GCTTGGAATGGAAGCCAATC+TGG 0.361798 3.2:-6682230 MS.gene069958:CDS
GACATTCCTCATATTCATCT+TGG 0.362108 3.2:+6683220 None:intergenic
TCTTGGAGTGTAAACATTGC+CGG 0.362313 3.2:+6683257 None:intergenic
ACAGACAAACAATTGTTTAT+GGG 0.367661 3.2:-6683883 MS.gene069958:CDS
TATAGTAGGAAATGTGGTTT+TGG 0.369598 3.2:-6684574 MS.gene069958:CDS
CGTCCGTTGGGAGTATTTGT+TGG 0.371935 3.2:-6683917 MS.gene069958:CDS
TTCATCAGCCAATACAATTT+GGG 0.375471 3.2:+6684261 None:intergenic
GAAAGGGGAACATATTGAAT+TGG 0.379587 3.2:-6682944 MS.gene069958:CDS
TCAAATAACCATTGAAAAGA+AGG 0.380370 3.2:+6683833 None:intergenic
GGTGAATGATATCGTGCAAC+AGG 0.381657 3.2:-6684680 MS.gene069958:CDS
TCACCATTCATCACCACCTC+TGG 0.385515 3.2:-6684895 MS.gene069958:CDS
CCCACCCATTGCTTTGAGAA+AGG 0.392844 3.2:+6683808 None:intergenic
ATGAGACTCTTCATAAACTT+TGG 0.394637 3.2:+6682819 None:intergenic
ATTTCACTTGATCGGAAGAT+TGG 0.399360 3.2:-6684391 MS.gene069958:CDS
GTCATGCCAGAAACATTTCA+TGG 0.400517 3.2:-6683725 MS.gene069958:CDS
GACACCGCGTCTACCCTCTT+TGG 0.402002 3.2:+6684483 None:intergenic
CACAAATGATAAATGATTAT+GGG 0.407470 3.2:-6683994 MS.gene069958:CDS
AGATCCGAGATTGCTTAGAT+AGG 0.425821 3.2:-6682657 MS.gene069958:CDS
TAATGTACCACACTTGGAAA+TGG 0.430430 3.2:-6684638 MS.gene069958:CDS
TCCAAGCATGTATGCCATCA+TGG 0.434387 3.2:+6682246 None:intergenic
ATATGGAAGCCATGCTTTGA+TGG 0.436030 3.2:-6682207 MS.gene069958:CDS
TACACCTTCAACCATTGGAT+TGG 0.436578 3.2:+6684711 None:intergenic
AATGGAAGCCAATCTGGATA+TGG 0.437868 3.2:-6682224 MS.gene069958:CDS
TAAATGATTCACATGCCTTA+AGG 0.440417 3.2:+6683673 None:intergenic
GTGGGCACTGTTGATCTTGG+TGG 0.443396 3.2:-6682694 MS.gene069958:CDS
ATCATTTATCATTTGTGCAT+CGG 0.444064 3.2:+6684000 None:intergenic
ACGTGTGTCGTTTCTACCAT+TGG 0.448381 3.2:+6684936 None:intergenic
TGTTTAAGAAATTTGAAAGA+AGG 0.449252 3.2:-6683189 MS.gene069958:CDS
TCCAATTTCTCAAGCCAAGT+TGG 0.453093 3.2:+6682619 None:intergenic
TGGGCACTGTTGATCTTGGT+GGG 0.455624 3.2:-6682693 MS.gene069958:CDS
GAAACCTTTCTCAAAGCAAT+GGG 0.457265 3.2:-6683812 MS.gene069958:CDS
TGTGTACCATCATTGTTTGC+AGG 0.460822 3.2:+6682444 None:intergenic
CATGGCTTCCATATCCAGAT+TGG 0.462462 3.2:+6682216 None:intergenic
AACAGGATGTTTAGCACGTA+TGG 0.468473 3.2:-6684416 MS.gene069958:CDS
TGCATCTTGATCTGTTAGAA+TGG 0.469730 3.2:+6683772 None:intergenic
GGAGTTTGAGTCTGAGGCCT+TGG 0.475074 3.2:-6684617 MS.gene069958:CDS
TGAAACCTTTCTCAAAGCAA+TGG 0.476564 3.2:-6683813 MS.gene069958:CDS
ATGGAAGTCTACATGAGATT+AGG 0.477147 3.2:-6682133 MS.gene069958:CDS
GTTTAAGAAATTTGAAAGAA+GGG 0.482494 3.2:-6683188 MS.gene069958:CDS
ATAAATGATTATGGGTACTT+TGG 0.482723 3.2:-6683986 MS.gene069958:CDS
GGAATTCCAAGATGAATATG+AGG 0.483458 3.2:-6683226 MS.gene069958:CDS
AATAAGAATTATCGTCCGTT+GGG 0.484650 3.2:-6683929 MS.gene069958:CDS
TCCAAATGTCAAATGAGATT+AGG 0.485144 3.2:-6682109 MS.gene069958:CDS
CCCATGATGGCATACATGCT+TGG 0.488076 3.2:-6682247 MS.gene069958:CDS
CAAATAACCATTGAAAAGAA+GGG 0.495588 3.2:+6683834 None:intergenic
ACAAGCATCCCAAATTGTAT+TGG 0.495869 3.2:-6684269 MS.gene069958:CDS
GATGTAATCAAAATTGGAAA+GGG 0.496181 3.2:-6682960 MS.gene069958:CDS
TCACTAAGGTATGGTGAAGT+AGG 0.507546 3.2:-6684121 MS.gene069958:CDS
TCTATGGATGGAGAGTCAAT+TGG 0.511024 3.2:-6682766 MS.gene069958:CDS
GATGGTACACATGCTTTGAA+TGG 0.516924 3.2:-6682432 MS.gene069958:CDS
TTGCCGGCTTGTACAAGCAT+AGG 0.519591 3.2:+6683273 None:intergenic
AATGTGGGCACTGTTGATCT+TGG 0.520285 3.2:-6682697 MS.gene069958:CDS
ATCCCTATGCTTGTACAAGC+CGG 0.521377 3.2:-6683276 MS.gene069958:CDS
ATTGTGCACTTGGCATATAA+GGG 0.522000 3.2:-6683702 MS.gene069958:CDS
ATCATATAAACATACTCAGC+TGG 0.522562 3.2:+6684319 None:intergenic
AATAGTAGTAGCGAATCATA+TGG 0.523742 3.2:-6683127 MS.gene069958:CDS
TTGGACAAGAGATGCAAGGT+TGG 0.524873 3.2:-6682983 MS.gene069958:CDS
CATACTCAGCTGGCAGAAGA+AGG 0.525063 3.2:+6684329 None:intergenic
AAATAAGAATTATCGTCCGT+TGG 0.526037 3.2:-6683930 MS.gene069958:CDS
TGAAACTCATAAAAGAATGA+AGG 0.528219 3.2:+6684061 None:intergenic
CACCATTCATCACCACCTCT+GGG 0.529997 3.2:-6684894 MS.gene069958:CDS
TGGACAAGAGATGCAAGGTT+GGG 0.530700 3.2:-6682982 MS.gene069958:CDS
ACATCCAATCCAATGGTTGA+AGG 0.531051 3.2:-6684715 MS.gene069958:CDS
GTATGGTTATTTCACTTGAT+CGG 0.532614 3.2:-6684399 MS.gene069958:CDS
TAGTCCTATCTAAGCAATCT+CGG 0.533253 3.2:+6682653 None:intergenic
GCTCGAGCAGAAACTAGAAC+AGG 0.536024 3.2:-6684433 MS.gene069958:CDS
AAATCTCCTGCAAACAATGA+TGG 0.536617 3.2:-6682450 MS.gene069958:CDS
TGTATGCCATCATGGGTTGC+TGG 0.540590 3.2:+6682254 None:intergenic
AGCAATATATACTGAAACGT+TGG 0.540916 3.2:-6683002 MS.gene069958:CDS
TCAAGATGCAGCAATGGCTA+AGG 0.541612 3.2:-6683759 MS.gene069958:CDS
ACGTGATTACTTAACAAAAG+AGG 0.543276 3.2:-6684455 MS.gene069958:CDS
CTAAAAGGAACCACTCACTA+AGG 0.543419 3.2:-6684135 MS.gene069958:CDS
CAATCTCCAGCAACCCATGA+TGG 0.544924 3.2:-6682260 MS.gene069958:CDS
TGCCCAGAGGTGGTGATGAA+TGG 0.545146 3.2:+6684892 None:intergenic
GTACACATGCTTTGAATGGA+AGG 0.545764 3.2:-6682428 MS.gene069958:CDS
CAGACAAACAATTGTTTATG+GGG 0.545894 3.2:-6683882 MS.gene069958:CDS
ATAATGTTTCTAAAGACTCA+TGG 0.548211 3.2:-6683547 MS.gene069958:CDS
CCAAGCATGTATGCCATCAT+GGG 0.548509 3.2:+6682247 None:intergenic
GGAAATGGAGTTTGAGTCTG+AGG 0.549669 3.2:-6684623 MS.gene069958:CDS
AATGAGTATAGTAGGAAATG+TGG 0.549866 3.2:-6684580 MS.gene069958:CDS
ACCTTTCTCAAAGCAATGGG+TGG 0.552305 3.2:-6683809 MS.gene069958:CDS
GGATGTAATCAAAATTGGAA+AGG 0.552421 3.2:-6682961 MS.gene069958:CDS
TCGGAAGATTGGAAAATACA+AGG 0.556421 3.2:-6684380 MS.gene069958:CDS
TGTTAGTAATGTACCACACT+TGG 0.560348 3.2:-6684644 MS.gene069958:CDS
TTGCTCAATTTAACTGCTCG+AGG 0.564353 3.2:+6682880 None:intergenic
ATCTTACCGGTGCCCAGAGG+TGG 0.565589 3.2:+6684882 None:intergenic
ATATAAGGGAAAATGCCTTA+AGG 0.566279 3.2:-6683688 MS.gene069958:CDS
ATTATAAAATTCATATGCCA+AGG 0.568982 3.2:+6684600 None:intergenic
AACAGATCAAGATGCAGCAA+TGG 0.573110 3.2:-6683765 MS.gene069958:CDS
ATTCTTATTTGTCTTGAATG+TGG 0.574010 3.2:+6683943 None:intergenic
TGCCGGCTTGTACAAGCATA+GGG 0.574909 3.2:+6683274 None:intergenic
AGGAACCACTCACTAAGGTA+TGG 0.576328 3.2:-6684130 MS.gene069958:CDS
GTGCGAAAGACTTTCACTGC+AGG 0.578283 3.2:-6683480 MS.gene069958:intron
TGTCGAAAGTTTGAGACACA+TGG 0.578537 3.2:-6683084 MS.gene069958:CDS
TTTGAGATGCCATCAAAGCA+TGG 0.583887 3.2:+6682198 None:intergenic
CATAAACAATTGTTTGTCTG+TGG 0.584673 3.2:+6683885 None:intergenic
AAAGAGTTGTCAACGGAAAG+CGG 0.589356 3.2:-6683362 MS.gene069958:CDS
AAAATTTGTGTGCTCCAAAG+AGG 0.589431 3.2:-6684497 MS.gene069958:CDS
TCATCACCACCTCTGGGCAC+CGG 0.597509 3.2:-6684888 MS.gene069958:intron
GATGGCATACATGCTTGGAA+TGG 0.609086 3.2:-6682242 MS.gene069958:CDS
CACTTTGAAAGAGTTGTCAA+CGG 0.610932 3.2:-6683369 MS.gene069958:CDS
CCTTTAACAGAAGCTGACAA+TGG 0.612454 3.2:-6682152 MS.gene069958:CDS
CCTTTCTCAAAGCAATGGGT+GGG 0.612770 3.2:-6683808 MS.gene069958:CDS
ATGTAATCAAAATTGGAAAG+GGG 0.613707 3.2:-6682959 MS.gene069958:CDS
ATGCATTGATCTACACGAAG+AGG 0.614015 3.2:-6683612 MS.gene069958:CDS
GAATATTACATCCAATCCAA+TGG 0.614280 3.2:-6684722 MS.gene069958:CDS
AAATTTGTGTGCTCCAAAGA+GGG 0.614397 3.2:-6684496 MS.gene069958:CDS
GAATTTGTGTCAAAACAAGC+TGG 0.617409 3.2:-6684211 MS.gene069958:CDS
CAAGGTTATTGACTTTGTAG+CGG 0.620198 3.2:-6684362 MS.gene069958:CDS
CTTCACCATACCTTAGTGAG+TGG 0.628280 3.2:+6684125 None:intergenic
CGTTTCAGTATATATTGCTG+AGG 0.628961 3.2:+6683006 None:intergenic
GGGCACTGTTGATCTTGGTG+GGG 0.634976 3.2:-6682692 MS.gene069958:CDS
TACAAATTATGATAACAGCA+AGG 0.637062 3.2:-6683154 MS.gene069958:CDS
GCTGGTGGAATAAACACTGT+TGG 0.638577 3.2:-6684193 MS.gene069958:CDS
TCAAACTCCATTTCCAAGTG+TGG 0.642402 3.2:+6684631 None:intergenic
AACGTTGGACAAGAGATGCA+AGG 0.647252 3.2:-6682987 MS.gene069958:CDS
TTTGTGTCAAAACAAGCTGG+TGG 0.647892 3.2:-6684208 MS.gene069958:CDS
AGGCCAACAAATACTCCCAA+CGG 0.650363 3.2:+6683914 None:intergenic
TGCTCCAAAGAGGGTAGACG+CGG 0.660484 3.2:-6684487 MS.gene069958:CDS
GTGAATGATATCGTGCAACA+GGG 0.667513 3.2:-6684679 MS.gene069958:CDS
AAAATCTTACCGGTGCCCAG+AGG 0.742952 3.2:+6684879 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTATAATGAGTATAGT+AGG - chr3.2:6682448-6682467 MS.gene069958:CDS 15.0%
!! ATCAATTGCAAATGAAAAAA+AGG - chr3.2:6684311-6684330 MS.gene069958:CDS 20.0%
!! ATTATAAAATTCATATGCCA+AGG + chr3.2:6682439-6682458 None:intergenic 20.0%
!! CACAAATGATAAATGATTAT+GGG - chr3.2:6683042-6683061 MS.gene069958:CDS 20.0%
!! GTTTAAGAAATTTGAAAGAA+GGG - chr3.2:6683848-6683867 MS.gene069958:CDS 20.0%
!! TATTCACATTATCTAGAAAA+TGG + chr3.2:6682299-6682318 None:intergenic 20.0%
!! TGTTTAAGAAATTTGAAAGA+AGG - chr3.2:6683847-6683866 MS.gene069958:CDS 20.0%
!!! ACAAATTCATGAAAATCTTT+TGG + chr3.2:6682813-6682832 None:intergenic 20.0%
!!! AGCAAATAACAAACATATTT+TGG - chr3.2:6683012-6683031 MS.gene069958:CDS 20.0%
!!! ATCTTTTTCATTTTCAATCT+TGG + chr3.2:6683742-6683761 None:intergenic 20.0%
!!! CATGAATATTTGAAAGTATT+TGG - chr3.2:6682211-6682230 MS.gene069958:CDS 20.0%
!!! GCAAATAACAAACATATTTT+GGG - chr3.2:6683013-6683032 MS.gene069958:CDS 20.0%
! AAGGAAGAGAAAGAAAAAAT+TGG - chr3.2:6684627-6684646 MS.gene069958:CDS 25.0%
! ACAGACAAACAATTGTTTAT+GGG - chr3.2:6683153-6683172 MS.gene069958:CDS 25.0%
! ATAAATGATTATGGGTACTT+TGG - chr3.2:6683050-6683069 MS.gene069958:CDS 25.0%
! ATCATTTATCATTTGTGCAT+CGG + chr3.2:6683039-6683058 None:intergenic 25.0%
! ATGTAATCAAAATTGGAAAG+GGG - chr3.2:6684077-6684096 MS.gene069958:CDS 25.0%
! CAAATAACCATTGAAAAGAA+GGG + chr3.2:6683205-6683224 None:intergenic 25.0%
! CACATGTTAAAAAGAAAGTA+TGG + chr3.2:6684502-6684521 None:intergenic 25.0%
! GACTAAGAGAAAGAAAAAAT+TGG - chr3.2:6684467-6684486 MS.gene069958:CDS 25.0%
! GATGTAATCAAAATTGGAAA+GGG - chr3.2:6684076-6684095 MS.gene069958:CDS 25.0%
! GCAAATAAAAGCAAAAAAGA+TGG - chr3.2:6682501-6682520 MS.gene069958:intron 25.0%
! GCACAAATGATAAATGATTA+TGG - chr3.2:6683041-6683060 MS.gene069958:CDS 25.0%
! TACAAATTATGATAACAGCA+AGG - chr3.2:6683882-6683901 MS.gene069958:CDS 25.0%
! TCAAATAACCATTGAAAAGA+AGG + chr3.2:6683206-6683225 None:intergenic 25.0%
! TCCTTGAATCGAAAAATTTA+TGG + chr3.2:6683517-6683536 None:intergenic 25.0%
! TGAAACTCATAAAAGAATGA+AGG + chr3.2:6682978-6682997 None:intergenic 25.0%
! TGGATAAAAAGAGACAAAAA+AGG - chr3.2:6684436-6684455 MS.gene069958:CDS 25.0%
!! ATAATGTTTCTAAAGACTCA+TGG - chr3.2:6683489-6683508 MS.gene069958:CDS 25.0%
!! ATTCTTATTTGTCTTGAATG+TGG + chr3.2:6683096-6683115 None:intergenic 25.0%
!! ATTCTTTTATGAGTTTCAGA+TGG - chr3.2:6682980-6682999 MS.gene069958:CDS 25.0%
!! TGTTACTTCTACTATTATGT+AGG - chr3.2:6684751-6684770 MS.gene069958:intron 25.0%
!! TTTTCGATTCAAGGAAAAAT+GGG - chr3.2:6683522-6683541 MS.gene069958:CDS 25.0%
!!! TCCATAAATTTTTCGATTCA+AGG - chr3.2:6683513-6683532 MS.gene069958:CDS 25.0%
!!! TGTTACTTTTACTACTATGT+AGG - chr3.2:6684561-6684580 MS.gene069958:CDS 25.0%
!!! TTTTATTTGCATATTCTCGA+CGG + chr3.2:6682491-6682510 None:intergenic 25.0%
!!! TTTTTCGATTCAAGGAAAAA+TGG - chr3.2:6683521-6683540 MS.gene069958:CDS 25.0%
AAATAAGAATTATCGTCCGT+TGG - chr3.2:6683106-6683125 MS.gene069958:CDS 30.0%
AATAAGAATTATCGTCCGTT+GGG - chr3.2:6683107-6683126 MS.gene069958:CDS 30.0%
AATAGTAGTAGCGAATCATA+TGG - chr3.2:6683909-6683928 MS.gene069958:CDS 30.0%
AATGAGTATAGTAGGAAATG+TGG - chr3.2:6682456-6682475 MS.gene069958:CDS 30.0%
ACGTGATTACTTAACAAAAG+AGG - chr3.2:6682581-6682600 MS.gene069958:CDS 30.0%
AGCAATATATACTGAAACGT+TGG - chr3.2:6684034-6684053 MS.gene069958:CDS 30.0%
ATATAAGGGAAAATGCCTTA+AGG - chr3.2:6683348-6683367 MS.gene069958:CDS 30.0%
ATCATATAAACATACTCAGC+TGG + chr3.2:6682720-6682739 None:intergenic 30.0%
ATGAGACTCTTCATAAACTT+TGG + chr3.2:6684220-6684239 None:intergenic 30.0%
ATTCATCAGCCAATACAATT+TGG + chr3.2:6682779-6682798 None:intergenic 30.0%
CACAGACAAACAATTGTTTA+TGG - chr3.2:6683152-6683171 MS.gene069958:CDS 30.0%
CAGACAAACAATTGTTTATG+GGG - chr3.2:6683154-6683173 MS.gene069958:CDS 30.0%
CATAAACAATTGTTTGTCTG+TGG + chr3.2:6683154-6683173 None:intergenic 30.0%
GAAAAAAAGGATCAGAATGT+GGG - chr3.2:6684324-6684343 MS.gene069958:CDS 30.0%
GAATATTACATCCAATCCAA+TGG - chr3.2:6682314-6682333 MS.gene069958:intron 30.0%
GACAAAGAACAAAATCTTAC+CGG + chr3.2:6682170-6682189 None:intergenic 30.0%
GATAGCAGTACAAAAATTCT+AGG + chr3.2:6684525-6684544 None:intergenic 30.0%
GCTTAGATAGGACTAAAAAA+AGG - chr3.2:6684391-6684410 MS.gene069958:CDS 30.0%
GGATGTAATCAAAATTGGAA+AGG - chr3.2:6684075-6684094 MS.gene069958:CDS 30.0%
TAAATGATTCACATGCCTTA+AGG + chr3.2:6683366-6683385 None:intergenic 30.0%
TCCAAATGTCAAATGAGATT+AGG - chr3.2:6684927-6684946 MS.gene069958:CDS 30.0%
TCCTAATCTCATTTGACATT+TGG + chr3.2:6684931-6684950 None:intergenic 30.0%
TGAAAAAAAGGATCAGAATG+TGG - chr3.2:6684323-6684342 MS.gene069958:CDS 30.0%
TGGAATTCCTCAAAAATTCT+TGG + chr3.2:6683799-6683818 None:intergenic 30.0%
TTCATCAGCCAATACAATTT+GGG + chr3.2:6682778-6682797 None:intergenic 30.0%
! AAACAATCCCTTCTTTTCAA+TGG - chr3.2:6683195-6683214 MS.gene069958:CDS 30.0%
! GTATGGTTATTTCACTTGAT+CGG - chr3.2:6682637-6682656 MS.gene069958:CDS 30.0%
! TATAGTAGGAAATGTGGTTT+TGG - chr3.2:6682462-6682481 MS.gene069958:intron 30.0%
! TATGCTGACTAAAAAGTCTA+TGG - chr3.2:6684254-6684273 MS.gene069958:CDS 30.0%
! TGATCTGTTAGAATGGTTTT+AGG + chr3.2:6683260-6683279 None:intergenic 30.0%
! TTACACTCCAAGAATTTTTG+AGG - chr3.2:6683789-6683808 MS.gene069958:CDS 30.0%
!!! AAGAAGAATTTTTGAGTGGA+TGG - chr3.2:6683447-6683466 MS.gene069958:intron 30.0%
!!! AGAAGAATTTTTGAGTGGAT+GGG - chr3.2:6683448-6683467 MS.gene069958:intron 30.0%
AAAATTTGTGTGCTCCAAAG+AGG - chr3.2:6682539-6682558 MS.gene069958:intron 35.0%
AAATCTCCTGCAAACAATGA+TGG - chr3.2:6684586-6684605 MS.gene069958:CDS 35.0%
AAATTTGTGTGCTCCAAAGA+GGG - chr3.2:6682540-6682559 MS.gene069958:intron 35.0%
ACAAGCATCCCAAATTGTAT+TGG - chr3.2:6682767-6682786 MS.gene069958:CDS 35.0%
ATGGAAGTCTACATGAGATT+AGG - chr3.2:6684903-6684922 MS.gene069958:CDS 35.0%
ATTCAAGGAAAAATGGGCAT+GGG - chr3.2:6683528-6683547 MS.gene069958:CDS 35.0%
ATTGTGCACTTGGCATATAA+GGG - chr3.2:6683334-6683353 MS.gene069958:CDS 35.0%
ATTTCACTTGATCGGAAGAT+TGG - chr3.2:6682645-6682664 MS.gene069958:CDS 35.0%
CACAATCCATGAAATGTTTC+TGG + chr3.2:6683320-6683339 None:intergenic 35.0%
CGTTTCAGTATATATTGCTG+AGG + chr3.2:6684033-6684052 None:intergenic 35.0%
CTGACTAAAAAGTCTATGGA+TGG - chr3.2:6684258-6684277 MS.gene069958:CDS 35.0%
GAAACCTTTCTCAAAGCAAT+GGG - chr3.2:6683224-6683243 MS.gene069958:CDS 35.0%
GAAAGGGGAACATATTGAAT+TGG - chr3.2:6684092-6684111 MS.gene069958:CDS 35.0%
GAATTTGTGTCAAAACAAGC+TGG - chr3.2:6682825-6682844 MS.gene069958:CDS 35.0%
GACATTCCTCATATTCATCT+TGG + chr3.2:6683819-6683838 None:intergenic 35.0%
GGAATTCCAAGATGAATATG+AGG - chr3.2:6683810-6683829 MS.gene069958:CDS 35.0%
GGTTGGGATGTAATCAAAAT+TGG - chr3.2:6684070-6684089 MS.gene069958:CDS 35.0%
TAATGTACCACACTTGGAAA+TGG - chr3.2:6682398-6682417 MS.gene069958:intron 35.0%
TAGTCCTATCTAAGCAATCT+CGG + chr3.2:6684386-6684405 None:intergenic 35.0%
TAGTGCGAAGCAAATTTCTA+TGG + chr3.2:6682884-6682903 None:intergenic 35.0%
TCGGAAGATTGGAAAATACA+AGG - chr3.2:6682656-6682675 MS.gene069958:CDS 35.0%
TGAAACCTTTCTCAAAGCAA+TGG - chr3.2:6683223-6683242 MS.gene069958:CDS 35.0%
TGCATCTTGATCTGTTAGAA+TGG + chr3.2:6683267-6683286 None:intergenic 35.0%
TGTTAGTAATGTACCACACT+TGG - chr3.2:6682392-6682411 MS.gene069958:intron 35.0%
TTGTTTGTCTGTGGCTATTA+AGG + chr3.2:6683145-6683164 None:intergenic 35.0%
! CACTTTGAAAGAGTTGTCAA+CGG - chr3.2:6683667-6683686 MS.gene069958:CDS 35.0%
! GAAATTTGCTTCGCACTAAA+AGG - chr3.2:6682886-6682905 MS.gene069958:CDS 35.0%
! GGTTGAAGGTGTAGAAAAAT+TGG - chr3.2:6682335-6682354 MS.gene069958:intron 35.0%
! TTTTCTACACCTTCAACCAT+TGG + chr3.2:6682333-6682352 None:intergenic 35.0%
!! ATTGTATTGGCTGATGAATC+TGG - chr3.2:6682780-6682799 MS.gene069958:CDS 35.0%
!! CAAGGTTATTGACTTTGTAG+CGG - chr3.2:6682674-6682693 MS.gene069958:CDS 35.0%
!! CTAAAAAAAGGCATCCAACT+TGG - chr3.2:6684403-6684422 MS.gene069958:CDS 35.0%
!! GAGGAAGAAGAATTTTTGAG+TGG - chr3.2:6683443-6683462 MS.gene069958:intron 35.0%
AAAGAGTTGTCAACGGAAAG+CGG - chr3.2:6683674-6683693 MS.gene069958:CDS 40.0%
AACAGATCAAGATGCAGCAA+TGG - chr3.2:6683271-6683290 MS.gene069958:CDS 40.0%
AACAGGATGTTTAGCACGTA+TGG - chr3.2:6682620-6682639 MS.gene069958:CDS 40.0%
AATGGAAGCCAATCTGGATA+TGG - chr3.2:6684812-6684831 MS.gene069958:intron 40.0%
ACATCCAATCCAATGGTTGA+AGG - chr3.2:6682321-6682340 MS.gene069958:intron 40.0%
AGATCCGAGATTGCTTAGAT+AGG - chr3.2:6684379-6684398 MS.gene069958:CDS 40.0%
ATATGGAAGCCATGCTTTGA+TGG - chr3.2:6684829-6684848 MS.gene069958:intron 40.0%
CCATTGTCAGCTTCTGTTAA+AGG + chr3.2:6684887-6684906 None:intergenic 40.0%
CCTTTAACAGAAGCTGACAA+TGG - chr3.2:6684884-6684903 MS.gene069958:intron 40.0%
CTAAAAGGAACCACTCACTA+AGG - chr3.2:6682901-6682920 MS.gene069958:CDS 40.0%
GATTCAAGGAAAAATGGGCA+TGG - chr3.2:6683527-6683546 MS.gene069958:CDS 40.0%
GATTGTGCACTTGGCATATA+AGG - chr3.2:6683333-6683352 MS.gene069958:CDS 40.0%
GTCATGCCAGAAACATTTCA+TGG - chr3.2:6683311-6683330 MS.gene069958:CDS 40.0%
GTGAATGATATCGTGCAACA+GGG - chr3.2:6682357-6682376 MS.gene069958:intron 40.0%
TACACCTTCAACCATTGGAT+TGG + chr3.2:6682328-6682347 None:intergenic 40.0%
TCAAACTCCATTTCCAAGTG+TGG + chr3.2:6682408-6682427 None:intergenic 40.0%
TCACTAAGGTATGGTGAAGT+AGG - chr3.2:6682915-6682934 MS.gene069958:CDS 40.0%
TCCAATTTCTCAAGCCAAGT+TGG + chr3.2:6684420-6684439 None:intergenic 40.0%
TCTATGGATGGAGAGTCAAT+TGG - chr3.2:6684270-6684289 MS.gene069958:CDS 40.0%
TCTTGGAGTGTAAACATTGC+CGG + chr3.2:6683782-6683801 None:intergenic 40.0%
TGTGTACCATCATTGTTTGC+AGG + chr3.2:6684595-6684614 None:intergenic 40.0%
TTGCTCAATTTAACTGCTCG+AGG + chr3.2:6684159-6684178 None:intergenic 40.0%
TTTGTGTCAAAACAAGCTGG+TGG - chr3.2:6682828-6682847 MS.gene069958:CDS 40.0%
! ATGCATTGATCTACACGAAG+AGG - chr3.2:6683424-6683443 MS.gene069958:intron 40.0%
! CATTTCATGGATTGTGCACT+TGG - chr3.2:6683324-6683343 MS.gene069958:CDS 40.0%
! GATGGTACACATGCTTTGAA+TGG - chr3.2:6684604-6684623 MS.gene069958:CDS 40.0%
! GTACACATGCTTTGAATGGA+AGG - chr3.2:6684608-6684627 MS.gene069958:CDS 40.0%
! TCCAACTTGGCTTGAGAAAT+TGG - chr3.2:6684416-6684435 MS.gene069958:CDS 40.0%
! TGTCGAAAGTTTGAGACACA+TGG - chr3.2:6683952-6683971 MS.gene069958:CDS 40.0%
! TTTGAGATGCCATCAAAGCA+TGG + chr3.2:6684841-6684860 None:intergenic 40.0%
!!! AGAATTTTTGAGTGGATGGG+AGG - chr3.2:6683451-6683470 MS.gene069958:intron 40.0%
AACGTTGGACAAGAGATGCA+AGG - chr3.2:6684049-6684068 MS.gene069958:CDS 45.0%
ACCTTTCTCAAAGCAATGGG+TGG - chr3.2:6683227-6683246 MS.gene069958:CDS 45.0%
AGGAACCACTCACTAAGGTA+TGG - chr3.2:6682906-6682925 MS.gene069958:CDS 45.0%
AGGCCAACAAATACTCCCAA+CGG + chr3.2:6683125-6683144 None:intergenic 45.0%
ATCCCTATGCTTGTACAAGC+CGG - chr3.2:6683760-6683779 MS.gene069958:CDS 45.0%
CATGGCTTCCATATCCAGAT+TGG + chr3.2:6684823-6684842 None:intergenic 45.0%
CCAAGCATGTATGCCATCAT+GGG + chr3.2:6684792-6684811 None:intergenic 45.0%
CCTTTCTCAAAGCAATGGGT+GGG - chr3.2:6683228-6683247 MS.gene069958:CDS 45.0%
CTTCACCATACCTTAGTGAG+TGG + chr3.2:6682914-6682933 None:intergenic 45.0%
GATGGCATACATGCTTGGAA+TGG - chr3.2:6684794-6684813 MS.gene069958:intron 45.0%
GCTGGTGGAATAAACACTGT+TGG - chr3.2:6682843-6682862 MS.gene069958:CDS 45.0%
GGAAATGGAGTTTGAGTCTG+AGG - chr3.2:6682413-6682432 MS.gene069958:CDS 45.0%
GGTGAATGATATCGTGCAAC+AGG - chr3.2:6682356-6682375 MS.gene069958:intron 45.0%
TCAAGATGCAGCAATGGCTA+AGG - chr3.2:6683277-6683296 MS.gene069958:CDS 45.0%
TCCAAGCATGTATGCCATCA+TGG + chr3.2:6684793-6684812 None:intergenic 45.0%
TGGACAAGAGATGCAAGGTT+GGG - chr3.2:6684054-6684073 MS.gene069958:CDS 45.0%
TTGGACAAGAGATGCAAGGT+TGG - chr3.2:6684053-6684072 MS.gene069958:CDS 45.0%
! AATGTGGGCACTGTTGATCT+TGG - chr3.2:6684339-6684358 MS.gene069958:CDS 45.0%
AAAATCTTACCGGTGCCCAG+AGG + chr3.2:6682160-6682179 None:intergenic 50.0%
CAATCTCCAGCAACCCATGA+TGG - chr3.2:6684776-6684795 MS.gene069958:intron 50.0%
CACCATTCATCACCACCTCT+GGG - chr3.2:6682142-6682161 MS.gene069958:CDS 50.0%
CATACTCAGCTGGCAGAAGA+AGG + chr3.2:6682710-6682729 None:intergenic 50.0%
CCCATGATGGCATACATGCT+TGG - chr3.2:6684789-6684808 MS.gene069958:intron 50.0%
GCTCGAGCAGAAACTAGAAC+AGG - chr3.2:6682603-6682622 MS.gene069958:CDS 50.0%
GCTTGGAATGGAAGCCAATC+TGG - chr3.2:6684806-6684825 MS.gene069958:intron 50.0%
GTGCGAAAGACTTTCACTGC+AGG - chr3.2:6683556-6683575 MS.gene069958:CDS 50.0%
TCACCATTCATCACCACCTC+TGG - chr3.2:6682141-6682160 MS.gene069958:CDS 50.0%
! TGGGCACTGTTGATCTTGGT+GGG - chr3.2:6684343-6684362 MS.gene069958:CDS 50.0%
! TGTATGCCATCATGGGTTGC+TGG + chr3.2:6684785-6684804 None:intergenic 50.0%
!! CCCACCCATTGCTTTGAGAA+AGG + chr3.2:6683231-6683250 None:intergenic 50.0%
!! CGTCCGTTGGGAGTATTTGT+TGG - chr3.2:6683119-6683138 MS.gene069958:CDS 50.0%
!! TGCCGGCTTGTACAAGCATA+GGG + chr3.2:6683765-6683784 None:intergenic 50.0%
!! TTGCCGGCTTGTACAAGCAT+AGG + chr3.2:6683766-6683785 None:intergenic 50.0%
TGCTCCAAAGAGGGTAGACG+CGG - chr3.2:6682549-6682568 MS.gene069958:intron 55.0%
! GGAGTTTGAGTCTGAGGCCT+TGG - chr3.2:6682419-6682438 MS.gene069958:CDS 55.0%
! GGGCACTGTTGATCTTGGTG+GGG - chr3.2:6684344-6684363 MS.gene069958:CDS 55.0%
! GTGGGCACTGTTGATCTTGG+TGG - chr3.2:6684342-6684361 MS.gene069958:CDS 55.0%
! TGCCCAGAGGTGGTGATGAA+TGG + chr3.2:6682147-6682166 None:intergenic 55.0%
ATCTTACCGGTGCCCAGAGG+TGG + chr3.2:6682157-6682176 None:intergenic 60.0%
GACACCGCGTCTACCCTCTT+TGG + chr3.2:6682556-6682575 None:intergenic 60.0%
TCATCACCACCTCTGGGCAC+CGG - chr3.2:6682148-6682167 MS.gene069958:CDS 60.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 6682103 6684955 6682103 ID=MS.gene069958
chr3.2 mRNA 6682103 6684955 6682103 ID=MS.gene069958.t1;Parent=MS.gene069958
chr3.2 exon 6684889 6684955 6684889 ID=MS.gene069958.t1.exon1;Parent=MS.gene069958.t1
chr3.2 CDS 6684889 6684955 6684889 ID=cds.MS.gene069958.t1;Parent=MS.gene069958.t1
chr3.2 exon 6683481 6684751 6683481 ID=MS.gene069958.t1.exon2;Parent=MS.gene069958.t1
chr3.2 CDS 6683481 6684751 6683481 ID=cds.MS.gene069958.t1;Parent=MS.gene069958.t1
chr3.2 exon 6682570 6683421 6682570 ID=MS.gene069958.t1.exon3;Parent=MS.gene069958.t1
chr3.2 CDS 6682570 6683421 6682570 ID=cds.MS.gene069958.t1;Parent=MS.gene069958.t1
chr3.2 exon 6682410 6682475 6682410 ID=MS.gene069958.t1.exon4;Parent=MS.gene069958.t1
chr3.2 CDS 6682410 6682475 6682410 ID=cds.MS.gene069958.t1;Parent=MS.gene069958.t1
chr3.2 exon 6682103 6682285 6682103 ID=MS.gene069958.t1.exon5;Parent=MS.gene069958.t1
chr3.2 CDS 6682103 6682285 6682103 ID=cds.MS.gene069958.t1;Parent=MS.gene069958.t1
Gene Sequence

>MS.gene069958

ATGGTAGAAACGACACACGTAGAACATGATGCAAATCTTCACCATTCATCACCACCTCTGGGCACCGGTAAGATTTTGTTCTTTGTCGATGAATATACACACGTAGAACATGAATATTTGAAAGTATTTGGACAATATAAAATTAATATAAAATGTCTATGAATATTAACATGTTGACTTTATATTTTTTTTTCCATTTTCTAGATAATGTGAATATTACATCCAATCCAATGGTTGAAGGTGTAGAAAAATTGGTGAATGATATCGTGCAACAGGGAAAAGAGAGTACTGTTAGTAATGTACCACACTTGGAAATGGAGTTTGAGTCTGAGGCCTTGGCATATGAATTTTATAATGAGTATAGTAGGAAATGTGGTTTTGGTATCCGTCGAGAATATGCAAATAAAAGCAAAAAAGATGGAGTTCTTACTTCAAGAAAATTTGTGTGCTCCAAAGAGGGTAGACGCGGTGTCGACAAACGTGATTACTTAACAAAAGAGGCTCGAGCAGAAACTAGAACAGGATGTTTAGCACGTATGGTTATTTCACTTGATCGGAAGATTGGAAAATACAAGGTTATTGACTTTGTAGCGGAACATAATCACCTTCTTCTGCCAGCTGAGTATGTTTATATGATTCGCTCTCATCGACACATATCTGAGTCACAAGCATCCCAAATTGTATTGGCTGATGAATCTGGATTGAAACCAAAAGATTTTCATGAATTTGTGTCAAAACAAGCTGGTGGAATAAACACTGTTGGTTACACAAGACAAGACCATAGAAATTTGCTTCGCACTAAAAGGAACCACTCACTAAGGTATGGTGAAGTAGGTGCATTACTAATACATTTCAAAAAGCAAAGTGAAAATCCTTCATTCTTTTATGAGTTTCAGATGGATGTTGAAGAGCAAATAACAAACATATTTTGGGCCGATGCACAAATGATAAATGATTATGGGTACTTTGGTGATGTTGTCACTTTTGACACCACATTCAAGACAAATAAGAATTATCGTCCGTTGGGAGTATTTGTTGGCCTTAATAGCCACAGACAAACAATTGTTTATGGGGCAGCATTGTTATATGATGAAACAATCCCTTCTTTTCAATGGTTATTTGAAACCTTTCTCAAAGCAATGGGTGGGAAAAAGCCTAAAACCATTCTAACAGATCAAGATGCAGCAATGGCTAAGGCTCTTTCTATAGTCATGCCAGAAACATTTCATGGATTGTGCACTTGGCATATAAGGGAAAATGCCTTAAGGCATGTGAATCATTTATATCAACAGAGCTCACAATTCTGCTCAGATTTTGAAGCATGCATTGATCTACACGAAGAGGAAGAAGAATTTTTGAGTGGATGGGAGGCTTTACTAGTTGAGCATAATGTTTCTAAAGACTCATGGCTCCATAAATTTTTCGATTCAAGGAAAAATGGGCATGGGCTTATGTGCGAAAGACTTTCACTGCAGGTATGAGATCTACTCAATTAAGTGAGAGTTTTAATGCTGATTTAAAAAATCATTTGAAGTCAGATTTAAATTTGATACAATTTTTCACACACTTTGAAAGAGTTGTCAACGGAAAGCGGAATAATGAGTCAGAAGCTGAATATGAGTCGAGACAAAAGTTGCCAAGATTGAAAATGAAAAAGATCCCTATGCTTGTACAAGCCGGCAATGTTTACACTCCAAGAATTTTTGAGGAATTCCAAGATGAATATGAGGAATGTCAAGCTTCTTGTTTAAGAAATTTGAAAGAAGGGTCATATGTTGTTACAAATTATGATAACAGCAAGGAGCGAATAGTAGTAGCGAATCATATGGATAAAACAGTTGCTTGTGATTGTCGAAAGTTTGAGACACATGGAATCTTATGCAGTCATGCTTTGAAAGTTTTAGATTTTATGAATGTTAAGCTAATTCCTCAGCAATATATACTGAAACGTTGGACAAGAGATGCAAGGTTGGGATGTAATCAAAATTGGAAAGGGGAACATATTGAATTGGACATAAAAGCTCATTTCATGAAACGATACAATGAGTTATGTCCTCGAGCAGTTAAATTGAGCAATAGAGCATCAGAATCTCATGAAACTTACACATTTTTGTCCAAAGTTTATGAAGAGTCTCATAAAATAGTTGAAGATATGCTGACTAAAAAGTCTATGGATGGAGAGTCAATTGGAATGAGTCATGTGTCTATATCAATTGCAAATGAAAAAAAGGATCAGAATGTGGGCACTGTTGATCTTGGTGGGGCAAAAGCAATAAAGATCCGAGATTGCTTAGATAGGACTAAAAAAAGGCATCCAACTTGGCTTGAGAAATTGGATAAAAAGAGACAAAAAAGGCTATCACAGACTAAGAGAAAGAAAAAATTGGTAAACAACTCTTTACTTTCTTTTTAACATGTGCCTAGAATTTTTGTACTGCTATCACATATACATAATACATGTTACTTTTACTACTATGTAGGAAAAATCTCCTGCAAACAATGATGGTACACATGCTTTGAATGGAAGGAAGAGAAAGAAAAAATTGGTAAGAATATCCATACTTTCTTTTTAACATGTGCAGAATTTCAGTACTGCTATCACATATATATATATATATATATATATATATATATATATATATAATACATGTTACTTCTACTATTATGTAGGAACAATCTCCAGCAACCCATGATGGCATACATGCTTGGAATGGAAGCCAATCTGGATATGGAAGCCATGCTTTGATGGCATCTCAAACTGAGAATGCAAGTCGACATTTACCTTTAACAGAAGCTGACAATGGAAGTCTACATGAGATTAGGATCCAAATGTCAAATGAGATTAGGATCTAA
Protein sequence

>MS.gene069958.t1

MVETTHVEHDANLHHSSPPLGTDNVNITSNPMVEGVEKLVNDIVQQGKESTVSNVPHLEMEFESEALAYEFYNEYSRKCGFGIRREYANKSKKDGVLTSRKFVCSKEGRRGVDKRDYLTKEARAETRTGCLARMVISLDRKIGKYKVIDFVAEHNHLLLPAEYVYMIRSHRHISESQASQIVLADESGLKPKDFHEFVSKQAGGINTVGYTRQDHRNLLRTKRNHSLRYGEVGALLIHFKKQSENPSFFYEFQMDVEEQITNIFWADAQMINDYGYFGDVVTFDTTFKTNKNYRPLGVFVGLNSHRQTIVYGAALLYDETIPSFQWLFETFLKAMGGKKPKTILTDQDAAMAKALSIVMPETFHGLCTWHIRENALRHVNHLYQQSSQFCSDFEACIDLHEEEEEFLSGWEALLVEHNVSKDSWLHKFFDSRKNGHGLMCERLSLQSDLNLIQFFTHFERVVNGKRNNESEAEYESRQKLPRLKMKKIPMLVQAGNVYTPRIFEEFQDEYEECQASCLRNLKEGSYVVTNYDNSKERIVVANHMDKTVACDCRKFETHGILCSHALKVLDFMNVKLIPQQYILKRWTRDARLGCNQNWKGEHIELDIKAHFMKRYNELCPRAVKLSNRASESHETYTFLSKVYEESHKIVEDMLTKKSMDGESIGMSHVSISIANEKKDQNVGTVDLGGAKAIKIRDCLDRTKKRHPTWLEKLDKKRQKRLSQTKRKKKLEKSPANNDGTHALNGRKRKKKLEQSPATHDGIHAWNGSQSGYGSHALMASQTENASRHLPLTEADNGSLHEIRIQMSNEIRI