Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07006.t1 | KEH24377.1 | 69.9 | 176 | 51 | 1 | 7 | 182 | 1 | 174 | 3.00E-58 | 235.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07006.t1 | Q944S2 | 75.5 | 102 | 23 | 1 | 20 | 119 | 25 | 126 | 1.2e-39 | 164.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07006.t1 | G7LCS5 | 69.9 | 176 | 51 | 1 | 7 | 182 | 1 | 174 | 2.2e-58 | 235.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene07006.t1 | TF | C3H |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07006.t1 | MTR_8g058557 | 70.787 | 178 | 46 | 3 | 7 | 182 | 1 | 174 | 3.83e-81 | 244 |
| MS.gene07006.t1 | MTR_7g108870 | 70.787 | 178 | 46 | 3 | 7 | 182 | 1 | 174 | 7.15e-81 | 244 |
| MS.gene07006.t1 | MTR_7g108870 | 70.787 | 178 | 46 | 3 | 7 | 182 | 1 | 174 | 1.95e-79 | 244 |
| MS.gene07006.t1 | MTR_8g058590 | 70.787 | 178 | 46 | 3 | 7 | 182 | 1 | 174 | 1.95e-79 | 244 |
| MS.gene07006.t1 | MTR_8g058607 | 82.301 | 113 | 18 | 1 | 139 | 251 | 31 | 141 | 1.44e-63 | 195 |
| MS.gene07006.t1 | MTR_7g108868 | 81.982 | 111 | 18 | 1 | 139 | 249 | 18 | 126 | 1.77e-62 | 194 |
| MS.gene07006.t1 | MTR_8g058593 | 81.982 | 111 | 18 | 1 | 139 | 249 | 18 | 126 | 1.77e-62 | 194 |
| MS.gene07006.t1 | MTR_7g109250 | 51.852 | 189 | 23 | 3 | 128 | 249 | 50 | 237 | 2.51e-54 | 178 |
| MS.gene07006.t1 | MTR_7g109250 | 51.852 | 189 | 23 | 3 | 128 | 249 | 110 | 297 | 2.72e-53 | 177 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07006.t1 | AT2G47790 | 53.416 | 161 | 67 | 4 | 20 | 176 | 25 | 181 | 4.68e-48 | 163 |
| MS.gene07006.t1 | AT5G06420 | 52.564 | 156 | 24 | 1 | 146 | 251 | 129 | 284 | 4.85e-46 | 158 |
| MS.gene07006.t1 | AT5G06420 | 52.564 | 156 | 24 | 1 | 146 | 251 | 129 | 284 | 4.85e-46 | 158 |
| MS.gene07006.t1 | AT1G01350 | 51.923 | 156 | 25 | 1 | 146 | 251 | 94 | 249 | 5.37e-45 | 154 |
Find 62 sgRNAs with CRISPR-Local
Find 90 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACGTACTTTGGGATGATT+TGG | 0.280115 | 7.2:+5263289 | None:intergenic |
| AACTCTATCCAAACTAATTT+CGG | 0.290124 | 7.2:-5263327 | MS.gene07006:CDS |
| GAACAAGAGCTTAGAATATT+GGG | 0.292886 | 7.2:+5263001 | None:intergenic |
| GCGTTTAACGTTGTTGGGTA+TGG | 0.309545 | 7.2:+5263362 | None:intergenic |
| AGAACAAGAGCTTAGAATAT+TGG | 0.313825 | 7.2:+5263000 | None:intergenic |
| TGAAGACTCAAAATGAAAGT+TGG | 0.349810 | 7.2:+5262478 | None:intergenic |
| TTTCTATTATCAATGCAAAT+AGG | 0.350139 | 7.2:-5262577 | MS.gene07006:CDS |
| AATCGTCACCGAAATTAGTT+TGG | 0.355363 | 7.2:+5263319 | None:intergenic |
| ACCGAAGCGTTTAACGTTGT+TGG | 0.380689 | 7.2:+5263356 | None:intergenic |
| AAAATGAAAGTTGGGCTTCT+CGG | 0.382812 | 7.2:+5262487 | None:intergenic |
| TTGAAGTCTTTGCATATGTC+AGG | 0.387439 | 7.2:+5262308 | None:intergenic |
| GTTCTTCAGATGGTACTATC+AGG | 0.389104 | 7.2:-5262982 | MS.gene07006:CDS |
| GAAGACTCAAAATGAAAGTT+GGG | 0.391037 | 7.2:+5262479 | None:intergenic |
| CCAGTGGTGGGTCAATATTA+TGG | 0.397482 | 7.2:-5263082 | MS.gene07006:CDS |
| TCAGCGCACCCTCCTCTTCT+CGG | 0.409916 | 7.2:+5262187 | None:intergenic |
| TGACATATGCAAAGACTTCA+AGG | 0.411330 | 7.2:-5262306 | MS.gene07006:CDS |
| CCGAAGCGTTTAACGTTGTT+GGG | 0.411456 | 7.2:+5263357 | None:intergenic |
| ATTCATCATCAAAGAGATCA+TGG | 0.423985 | 7.2:+5262553 | None:intergenic |
| CGTTTAACGTTGTTGGGTAT+GGG | 0.432856 | 7.2:+5263363 | None:intergenic |
| GACCGAGGCGACTACAAGTC+CGG | 0.435443 | 7.2:-5262239 | MS.gene07006:CDS |
| TAGCAAAGCAACAGCAACTT+TGG | 0.436558 | 7.2:-5262432 | MS.gene07006:CDS |
| GGACACAAGAACATTTCAAC+AGG | 0.464750 | 7.2:-5262954 | MS.gene07006:intron |
| ACGTTGTTGGGTATGGGAAA+AGG | 0.467623 | 7.2:+5263369 | None:intergenic |
| TTGTGAATGGAAGGGATGAT+TGG | 0.474743 | 7.2:-5263153 | MS.gene07006:intron |
| AATGGAAGCAATTGCGGCCA+TGG | 0.476431 | 7.2:-5263409 | MS.gene07006:CDS |
| TGCAAAGACTTCAAGGAGAC+CGG | 0.477457 | 7.2:-5262299 | MS.gene07006:CDS |
| CTAAGCTCTTGTTCTTCAGA+TGG | 0.477643 | 7.2:-5262992 | MS.gene07006:CDS |
| CAGATGGTACTATCAGGACT+TGG | 0.481372 | 7.2:-5262976 | MS.gene07006:CDS |
| GGTGGCAGTTGGACAAAGAA+TGG | 0.496757 | 7.2:-5262217 | MS.gene07006:CDS |
| CCCAACAACGTTAAACGCTT+CGG | 0.516028 | 7.2:-5263357 | MS.gene07006:CDS |
| CCATAATATTGACCCACCAC+TGG | 0.537095 | 7.2:+5263082 | None:intergenic |
| GAAACTGTATTCACCAGTGG+TGG | 0.542400 | 7.2:-5263095 | MS.gene07006:CDS |
| ACAATAAATGGAAGCAATTG+CGG | 0.543794 | 7.2:-5263415 | None:intergenic |
| TTCAAGGAGACCGGGTATTG+TGG | 0.545327 | 7.2:-5262290 | MS.gene07006:CDS |
| ACCCGGACTTGTAGTCGCCT+CGG | 0.548237 | 7.2:+5262237 | None:intergenic |
| AGAAGAGGAGGGTGCGCTGA+TGG | 0.548558 | 7.2:-5262184 | None:intergenic |
| TTCTTTGTCCAACTGCCACC+CGG | 0.548782 | 7.2:+5262220 | None:intergenic |
| AAGGGATGATTGGAGTTCAA+TGG | 0.555515 | 7.2:-5263143 | MS.gene07006:CDS |
| GGAATGAAGCCGAGAAGAGG+AGG | 0.558808 | 7.2:-5262196 | MS.gene07006:CDS |
| TCAATATTATGGAGAGTGCA+AGG | 0.560776 | 7.2:-5263071 | MS.gene07006:CDS |
| TGCAAGTTTCTTCACGACCG+AGG | 0.564969 | 7.2:-5262254 | MS.gene07006:CDS |
| CTACAAGTCCGGGTGGCAGT+TGG | 0.571560 | 7.2:-5262228 | MS.gene07006:CDS |
| ACCGAGGCGACTACAAGTCC+GGG | 0.574409 | 7.2:-5262238 | MS.gene07006:CDS |
| GAGACCGGGTATTGTGGCTA+CGG | 0.578795 | 7.2:-5262284 | MS.gene07006:CDS |
| ATCGCCGTAGCCACAATACC+CGG | 0.586901 | 7.2:+5262280 | None:intergenic |
| AATGGAATGAAGCCGAGAAG+AGG | 0.595307 | 7.2:-5262199 | MS.gene07006:CDS |
| GAAACTCTAATATGAGTCGA+AGG | 0.595574 | 7.2:+5262350 | None:intergenic |
| TCGTTGTTCCTCGACATCCA+TGG | 0.607781 | 7.2:+5263392 | None:intergenic |
| TTCATCATCAAAGAGATCAT+GGG | 0.607963 | 7.2:+5262554 | None:intergenic |
| AGATGGTACTATCAGGACTT+GGG | 0.627841 | 7.2:-5262975 | MS.gene07006:CDS |
| GCAAAGACTTCAAGGAGACC+GGG | 0.633254 | 7.2:-5262298 | MS.gene07006:CDS |
| AATTGCGGCCATGGATGTCG+AGG | 0.639683 | 7.2:-5263400 | MS.gene07006:CDS |
| GAATGAAGCCGAGAAGAGGA+GGG | 0.646762 | 7.2:-5262195 | MS.gene07006:CDS |
| GGATGATTGGAGTTCAATGG+CGG | 0.648745 | 7.2:-5263140 | MS.gene07006:CDS |
| ATCCGTGGGTCATACTCACA+CGG | 0.649413 | 7.2:-5262383 | MS.gene07006:CDS |
| GTGTGAGTATGACCCACGGA+TGG | 0.652577 | 7.2:+5262385 | None:intergenic |
| AAACTGTATTCACCAGTGGT+GGG | 0.659751 | 7.2:-5263094 | MS.gene07006:CDS |
| CAATATTATGGAGAGTGCAA+GGG | 0.660822 | 7.2:-5263070 | MS.gene07006:CDS |
| GACCGTGTGAGTATGACCCA+CGG | 0.674066 | 7.2:+5262381 | None:intergenic |
| AGTGAAACTGTATTCACCAG+TGG | 0.687068 | 7.2:-5263098 | MS.gene07006:CDS |
| ATATGAGTCGAAGGTCTGAG+AGG | 0.697705 | 7.2:+5262359 | None:intergenic |
| GAGGCGACTACAAGTCCGGG+TGG | 0.737253 | 7.2:-5262235 | MS.gene07006:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGTTACTAATGTTATTATT+TGG | - | chr7.2:5262675-5262694 | MS.gene07006:intron | 15.0% |
| !!! | AATTAAGTTGTTTATCTATA+AGG | + | chr7.2:5262725-5262744 | None:intergenic | 15.0% |
| !! | ATTATAAATCTCCCAAATTA+AGG | + | chr7.2:5262410-5262429 | None:intergenic | 20.0% |
| !! | TTATAAATCTCCCAAATTAA+GGG | + | chr7.2:5262409-5262428 | None:intergenic | 20.0% |
| !! | TTTATTTATGCCCTTAATTT+GGG | - | chr7.2:5262396-5262415 | MS.gene07006:CDS | 20.0% |
| !! | TTTCTATTATCAATGCAAAT+AGG | - | chr7.2:5263018-5263037 | MS.gene07006:CDS | 20.0% |
| !!! | TATCAATCAGATTTTGTTTT+CGG | - | chr7.2:5262560-5262579 | MS.gene07006:CDS | 20.0% |
| !!! | TTGGGAGATTTATAATTTTT+GGG | - | chr7.2:5262414-5262433 | MS.gene07006:CDS | 20.0% |
| !!! | TTTGGGAGATTTATAATTTT+TGG | - | chr7.2:5262413-5262432 | MS.gene07006:CDS | 20.0% |
| !!! | TTTTATTTATGCCCTTAATT+TGG | - | chr7.2:5262395-5262414 | MS.gene07006:CDS | 20.0% |
| ! | AACTCTATCCAAACTAATTT+CGG | - | chr7.2:5262268-5262287 | MS.gene07006:CDS | 25.0% |
| ! | TCAAATAAGTCAATGCAAAT+AGG | - | chr7.2:5262944-5262963 | MS.gene07006:intron | 25.0% |
| !! | GTTTTTCTCTCCATAATTAT+TGG | - | chr7.2:5262697-5262716 | MS.gene07006:intron | 25.0% |
| !!! | ATCAATCAGATTTTGTTTTC+GGG | - | chr7.2:5262561-5262580 | MS.gene07006:CDS | 25.0% |
| !!! | TTTTTGGGTTTTTTTGTGAA+TGG | - | chr7.2:5262429-5262448 | MS.gene07006:CDS | 25.0% |
| AAATTGAATGTCAAAACTGC+AGG | - | chr7.2:5262995-5263014 | MS.gene07006:CDS | 30.0% | |
| ACTTATTTGAGCTTATCTAG+TGG | + | chr7.2:5262934-5262953 | None:intergenic | 30.0% | |
| AGAACAAGAGCTTAGAATAT+TGG | + | chr7.2:5262598-5262617 | None:intergenic | 30.0% | |
| AGCTTAAGAAGAAAGTGAAA+AGG | + | chr7.2:5262330-5262349 | None:intergenic | 30.0% | |
| ATAAGCACGTATATGATTAG+TGG | + | chr7.2:5262765-5262784 | None:intergenic | 30.0% | |
| ATTCATCATCAAAGAGATCA+TGG | + | chr7.2:5263045-5263064 | None:intergenic | 30.0% | |
| GAACAAGAGCTTAGAATATT+GGG | + | chr7.2:5262597-5262616 | None:intergenic | 30.0% | |
| GAAGACTCAAAATGAAAGTT+GGG | + | chr7.2:5263119-5263138 | None:intergenic | 30.0% | |
| TGAAGACTCAAAATGAAAGT+TGG | + | chr7.2:5263120-5263139 | None:intergenic | 30.0% | |
| TGAGAAAAAGAACATGAAGA+AGG | - | chr7.2:5263067-5263086 | MS.gene07006:CDS | 30.0% | |
| TTCATCATCAAAGAGATCAT+GGG | + | chr7.2:5263044-5263063 | None:intergenic | 30.0% | |
| ! | CTATAAGGCACCAATAATTA+TGG | + | chr7.2:5262710-5262729 | None:intergenic | 30.0% |
| AAAATGAAAGTTGGGCTTCT+CGG | + | chr7.2:5263111-5263130 | None:intergenic | 35.0% | |
| AAAGTGAAAAGGACGTACTT+TGG | + | chr7.2:5262319-5262338 | None:intergenic | 35.0% | |
| AAGTGAAAAGGACGTACTTT+GGG | + | chr7.2:5262318-5262337 | None:intergenic | 35.0% | |
| AATCGTCACCGAAATTAGTT+TGG | + | chr7.2:5262279-5262298 | None:intergenic | 35.0% | |
| CTTATTTCCATAAGCTCTTG+AGG | + | chr7.2:5262856-5262875 | None:intergenic | 35.0% | |
| GAAACTCTAATATGAGTCGA+AGG | + | chr7.2:5263248-5263267 | None:intergenic | 35.0% | |
| TGACATATGCAAAGACTTCA+AGG | - | chr7.2:5263289-5263308 | MS.gene07006:intron | 35.0% | |
| TTGAAGTCTTTGCATATGTC+AGG | + | chr7.2:5263290-5263309 | None:intergenic | 35.0% | |
| ! | CAATATTATGGAGAGTGCAA+GGG | - | chr7.2:5262525-5262544 | MS.gene07006:CDS | 35.0% |
| ! | TCAATATTATGGAGAGTGCA+AGG | - | chr7.2:5262524-5262543 | MS.gene07006:CDS | 35.0% |
| !!! | ATTTTTCAAGTTCCATCCGT+GGG | - | chr7.2:5263198-5263217 | MS.gene07006:intron | 35.0% |
| !!! | GGGTTTTTTTGTGAATGGAA+GGG | - | chr7.2:5262434-5262453 | MS.gene07006:CDS | 35.0% |
| !!! | TGGGTTTTTTTGTGAATGGA+AGG | - | chr7.2:5262433-5262452 | MS.gene07006:CDS | 35.0% |
| AAACTGTATTCACCAGTGGT+GGG | - | chr7.2:5262501-5262520 | MS.gene07006:CDS | 40.0% | |
| AAGGGATGATTGGAGTTCAA+TGG | - | chr7.2:5262452-5262471 | MS.gene07006:CDS | 40.0% | |
| AGATGGTACTATCAGGACTT+GGG | - | chr7.2:5262620-5262639 | MS.gene07006:intron | 40.0% | |
| AGTGAAACTGTATTCACCAG+TGG | - | chr7.2:5262497-5262516 | MS.gene07006:CDS | 40.0% | |
| CGTTTAACGTTGTTGGGTAT+GGG | + | chr7.2:5262235-5262254 | None:intergenic | 40.0% | |
| CTAAGCTCTTGTTCTTCAGA+TGG | - | chr7.2:5262603-5262622 | MS.gene07006:intron | 40.0% | |
| GGACACAAGAACATTTCAAC+AGG | - | chr7.2:5262641-5262660 | MS.gene07006:intron | 40.0% | |
| GTTCTTCAGATGGTACTATC+AGG | - | chr7.2:5262613-5262632 | MS.gene07006:intron | 40.0% | |
| TAGCAAAGCAACAGCAACTT+TGG | - | chr7.2:5263163-5263182 | MS.gene07006:intron | 40.0% | |
| TCAAGCAGCAAAGAGATCAT+GGG | + | chr7.2:5262970-5262989 | None:intergenic | 40.0% | |
| TTGTGAATGGAAGGGATGAT+TGG | - | chr7.2:5262442-5262461 | MS.gene07006:CDS | 40.0% | |
| ! | CTGAGGATAGCTTGTGAAAA+CGG | + | chr7.2:5262832-5262851 | None:intergenic | 40.0% |
| !!! | CATTTTTCAAGTTCCATCCG+TGG | - | chr7.2:5263197-5263216 | MS.gene07006:intron | 40.0% |
| AATGGAATGAAGCCGAGAAG+AGG | - | chr7.2:5263396-5263415 | MS.gene07006:CDS | 45.0% | |
| ACGTTGTTGGGTATGGGAAA+AGG | + | chr7.2:5262229-5262248 | None:intergenic | 45.0% | |
| ATATGAGTCGAAGGTCTGAG+AGG | + | chr7.2:5263239-5263258 | None:intergenic | 45.0% | |
| CAGATGGTACTATCAGGACT+TGG | - | chr7.2:5262619-5262638 | MS.gene07006:intron | 45.0% | |
| CCATAATATTGACCCACCAC+TGG | + | chr7.2:5262516-5262535 | None:intergenic | 45.0% | |
| CCCAACAACGTTAAACGCTT+CGG | - | chr7.2:5262238-5262257 | MS.gene07006:CDS | 45.0% | |
| CTCAAGCAGCAAAGAGATCA+TGG | + | chr7.2:5262971-5262990 | None:intergenic | 45.0% | |
| GAAACTGTATTCACCAGTGG+TGG | - | chr7.2:5262500-5262519 | MS.gene07006:CDS | 45.0% | |
| GCGTTTAACGTTGTTGGGTA+TGG | + | chr7.2:5262236-5262255 | None:intergenic | 45.0% | |
| GGATGATTGGAGTTCAATGG+CGG | - | chr7.2:5262455-5262474 | MS.gene07006:CDS | 45.0% | |
| TGCAAAGACTTCAAGGAGAC+CGG | - | chr7.2:5263296-5263315 | MS.gene07006:intron | 45.0% | |
| ! | ACCGAAGCGTTTAACGTTGT+TGG | + | chr7.2:5262242-5262261 | None:intergenic | 45.0% |
| ! | CCGAAGCGTTTAACGTTGTT+GGG | + | chr7.2:5262241-5262260 | None:intergenic | 45.0% |
| !! | CCAGTGGTGGGTCAATATTA+TGG | - | chr7.2:5262513-5262532 | MS.gene07006:CDS | 45.0% |
| !! | GGACGTACTTTGGGATGATT+TGG | + | chr7.2:5262309-5262328 | None:intergenic | 45.0% |
| ATCCGTGGGTCATACTCACA+CGG | - | chr7.2:5263212-5263231 | MS.gene07006:intron | 50.0% | |
| CCATAAGCTCTTGAGGTCTG+AGG | + | chr7.2:5262849-5262868 | None:intergenic | 50.0% | |
| CCTCAGACCTCAAGAGCTTA+TGG | - | chr7.2:5262846-5262865 | MS.gene07006:intron | 50.0% | |
| GAATGAAGCCGAGAAGAGGA+GGG | - | chr7.2:5263400-5263419 | MS.gene07006:CDS | 50.0% | |
| GCAAAGACTTCAAGGAGACC+GGG | - | chr7.2:5263297-5263316 | MS.gene07006:CDS | 50.0% | |
| GGTGGCAGTTGGACAAAGAA+TGG | - | chr7.2:5263378-5263397 | MS.gene07006:CDS | 50.0% | |
| TCGTTGTTCCTCGACATCCA+TGG | + | chr7.2:5262206-5262225 | None:intergenic | 50.0% | |
| TGCAAGTTTCTTCACGACCG+AGG | - | chr7.2:5263341-5263360 | MS.gene07006:CDS | 50.0% | |
| TTCTTTGTCCAACTGCCACC+CGG | + | chr7.2:5263378-5263397 | None:intergenic | 50.0% | |
| ! | TTCAAGGAGACCGGGTATTG+TGG | - | chr7.2:5263305-5263324 | MS.gene07006:CDS | 50.0% |
| AATTGCGGCCATGGATGTCG+AGG | - | chr7.2:5262195-5262214 | MS.gene07006:CDS | 55.0% | |
| ATCGCCGTAGCCACAATACC+CGG | + | chr7.2:5263318-5263337 | None:intergenic | 55.0% | |
| GACCGTGTGAGTATGACCCA+CGG | + | chr7.2:5263217-5263236 | None:intergenic | 55.0% | |
| GGAATGAAGCCGAGAAGAGG+AGG | - | chr7.2:5263399-5263418 | MS.gene07006:CDS | 55.0% | |
| GTGTGAGTATGACCCACGGA+TGG | + | chr7.2:5263213-5263232 | None:intergenic | 55.0% | |
| ! | GAGACCGGGTATTGTGGCTA+CGG | - | chr7.2:5263311-5263330 | MS.gene07006:CDS | 55.0% |
| ACCCGGACTTGTAGTCGCCT+CGG | + | chr7.2:5263361-5263380 | None:intergenic | 60.0% | |
| ACCGAGGCGACTACAAGTCC+GGG | - | chr7.2:5263357-5263376 | MS.gene07006:CDS | 60.0% | |
| CTACAAGTCCGGGTGGCAGT+TGG | - | chr7.2:5263367-5263386 | MS.gene07006:CDS | 60.0% | |
| GACCGAGGCGACTACAAGTC+CGG | - | chr7.2:5263356-5263375 | MS.gene07006:CDS | 60.0% | |
| TCAGCGCACCCTCCTCTTCT+CGG | + | chr7.2:5263411-5263430 | None:intergenic | 60.0% | |
| GAGGCGACTACAAGTCCGGG+TGG | - | chr7.2:5263360-5263379 | MS.gene07006:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 5262187 | 5263430 | 5262187 | ID=MS.gene07006 |
| chr7.2 | mRNA | 5262187 | 5263430 | 5262187 | ID=MS.gene07006.t1;Parent=MS.gene07006 |
| chr7.2 | exon | 5263297 | 5263430 | 5263297 | ID=MS.gene07006.t1.exon1;Parent=MS.gene07006.t1 |
| chr7.2 | CDS | 5263297 | 5263430 | 5263297 | ID=cds.MS.gene07006.t1;Parent=MS.gene07006.t1 |
| chr7.2 | exon | 5262955 | 5263162 | 5262955 | ID=MS.gene07006.t1.exon2;Parent=MS.gene07006.t1 |
| chr7.2 | CDS | 5262955 | 5263162 | 5262955 | ID=cds.MS.gene07006.t1;Parent=MS.gene07006.t1 |
| chr7.2 | exon | 5262187 | 5262600 | 5262187 | ID=MS.gene07006.t1.exon3;Parent=MS.gene07006.t1 |
| chr7.2 | CDS | 5262187 | 5262600 | 5262187 | ID=cds.MS.gene07006.t1;Parent=MS.gene07006.t1 |
| Gene Sequence |
| Protein sequence |
