Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070145.t1 | ABN05718.1 | 55.3 | 568 | 110 | 3 | 47 | 470 | 34 | 601 | 8.70E-163 | 583.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070145.t1 | Q9SZL8 | 34.3 | 175 | 110 | 3 | 289 | 462 | 396 | 566 | 1.3e-21 | 105.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070145.t1 | A2Q1A1 | 55.3 | 568 | 110 | 3 | 47 | 470 | 34 | 601 | 6.3e-163 | 583.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene070145.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070145.t1 | MTR_1g013060 | 48.544 | 206 | 98 | 3 | 85 | 289 | 10 | 208 | 3.21e-61 | 200 |
| MS.gene070145.t1 | MTR_8g465780 | 57.971 | 138 | 58 | 0 | 340 | 477 | 1 | 138 | 5.79e-51 | 171 |
| MS.gene070145.t1 | MTR_6g060410 | 56.436 | 101 | 40 | 2 | 91 | 190 | 76 | 173 | 6.28e-27 | 107 |
| MS.gene070145.t1 | MTR_4g080290 | 54.839 | 93 | 38 | 2 | 91 | 182 | 16 | 105 | 1.56e-22 | 92.4 |
| MS.gene070145.t1 | MTR_0558s0020 | 32.738 | 168 | 98 | 4 | 107 | 261 | 41 | 206 | 3.84e-16 | 79.3 |
| MS.gene070145.t1 | MTR_1g083640 | 31.548 | 168 | 100 | 4 | 107 | 261 | 56 | 221 | 2.25e-15 | 77.0 |
| MS.gene070145.t1 | MTR_4g035820 | 22.596 | 416 | 284 | 11 | 51 | 442 | 20 | 421 | 2.62e-15 | 79.0 |
| MS.gene070145.t1 | MTR_6g051425 | 28.571 | 189 | 124 | 4 | 104 | 288 | 19 | 200 | 3.53e-15 | 77.0 |
| MS.gene070145.t1 | MTR_2g098880 | 37.097 | 124 | 67 | 4 | 94 | 214 | 52 | 167 | 2.47e-14 | 73.2 |
| MS.gene070145.t1 | MTR_2g098880 | 37.097 | 124 | 67 | 4 | 94 | 214 | 64 | 179 | 2.85e-14 | 73.2 |
| MS.gene070145.t1 | MTR_3g008240 | 31.902 | 163 | 96 | 4 | 107 | 256 | 41 | 201 | 4.25e-14 | 71.6 |
| MS.gene070145.t1 | MTR_2g014100 | 29.762 | 168 | 103 | 4 | 107 | 261 | 49 | 214 | 5.92e-13 | 69.3 |
| MS.gene070145.t1 | MTR_6g022070 | 32.331 | 133 | 88 | 2 | 300 | 431 | 33 | 164 | 6.43e-12 | 67.0 |
| MS.gene070145.t1 | MTR_4g040430 | 30.864 | 162 | 95 | 5 | 107 | 256 | 40 | 196 | 6.69e-12 | 65.1 |
| MS.gene070145.t1 | MTR_4g067290 | 33.065 | 124 | 63 | 5 | 93 | 211 | 48 | 156 | 1.58e-11 | 64.7 |
| MS.gene070145.t1 | MTR_4g067290 | 33.065 | 124 | 63 | 5 | 93 | 211 | 48 | 156 | 1.65e-11 | 64.7 |
| MS.gene070145.t1 | MTR_4g067290 | 33.065 | 124 | 63 | 5 | 93 | 211 | 68 | 176 | 2.46e-11 | 64.3 |
| MS.gene070145.t1 | MTR_4g067290 | 33.065 | 124 | 63 | 5 | 93 | 211 | 68 | 176 | 2.56e-11 | 64.3 |
| MS.gene070145.t1 | MTR_4g067290 | 33.065 | 124 | 63 | 5 | 93 | 211 | 66 | 174 | 2.57e-11 | 64.3 |
| MS.gene070145.t1 | MTR_4g067290 | 33.065 | 124 | 63 | 5 | 93 | 211 | 108 | 216 | 3.01e-11 | 64.7 |
| MS.gene070145.t1 | MTR_2g098920 | 32.500 | 120 | 68 | 3 | 101 | 218 | 79 | 187 | 3.07e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070145.t1 | AT4G38180 | 34.286 | 175 | 110 | 3 | 289 | 462 | 396 | 566 | 1.00e-23 | 105 |
| MS.gene070145.t1 | AT4G38180 | 28.767 | 219 | 141 | 5 | 87 | 301 | 60 | 267 | 3.82e-15 | 78.6 |
| MS.gene070145.t1 | AT4G15090 | 32.184 | 174 | 116 | 2 | 294 | 467 | 377 | 548 | 4.57e-23 | 103 |
| MS.gene070145.t1 | AT4G15090 | 32.184 | 174 | 116 | 2 | 294 | 467 | 377 | 548 | 4.57e-23 | 103 |
| MS.gene070145.t1 | AT4G15090 | 32.184 | 174 | 116 | 2 | 294 | 467 | 377 | 548 | 4.57e-23 | 103 |
| MS.gene070145.t1 | AT4G15090 | 32.184 | 174 | 116 | 2 | 294 | 467 | 377 | 548 | 4.57e-23 | 103 |
| MS.gene070145.t1 | AT4G15090 | 32.184 | 174 | 116 | 2 | 294 | 467 | 377 | 548 | 4.57e-23 | 103 |
| MS.gene070145.t1 | AT3G22170 | 28.492 | 179 | 126 | 2 | 289 | 467 | 381 | 557 | 4.17e-21 | 97.4 |
| MS.gene070145.t1 | AT3G22170 | 28.492 | 179 | 126 | 2 | 289 | 467 | 381 | 557 | 4.17e-21 | 97.4 |
| MS.gene070145.t1 | AT4G38170 | 29.870 | 154 | 107 | 1 | 289 | 442 | 161 | 313 | 1.23e-18 | 89.4 |
| MS.gene070145.t1 | AT1G76320 | 31.765 | 170 | 112 | 3 | 298 | 467 | 318 | 483 | 3.02e-17 | 85.1 |
| MS.gene070145.t1 | AT1G76320 | 31.765 | 170 | 112 | 3 | 298 | 467 | 318 | 483 | 3.02e-17 | 85.1 |
| MS.gene070145.t1 | AT2G32250 | 30.636 | 173 | 118 | 2 | 295 | 467 | 322 | 492 | 3.08e-17 | 85.5 |
| MS.gene070145.t1 | AT2G32250 | 30.636 | 173 | 118 | 2 | 295 | 467 | 322 | 492 | 3.08e-17 | 85.5 |
| MS.gene070145.t1 | AT2G32250 | 30.636 | 173 | 118 | 2 | 295 | 467 | 281 | 451 | 3.08e-17 | 85.1 |
| MS.gene070145.t1 | AT1G76320 | 31.765 | 170 | 112 | 3 | 298 | 467 | 318 | 483 | 3.12e-17 | 85.1 |
| MS.gene070145.t1 | AT1G76320 | 31.765 | 170 | 112 | 3 | 298 | 467 | 318 | 483 | 3.16e-17 | 85.1 |
| MS.gene070145.t1 | AT2G32250 | 30.636 | 173 | 118 | 2 | 295 | 467 | 322 | 492 | 3.16e-17 | 85.5 |
| MS.gene070145.t1 | AT2G32250 | 30.636 | 173 | 118 | 2 | 295 | 467 | 322 | 492 | 3.16e-17 | 85.5 |
| MS.gene070145.t1 | AT2G32250 | 30.636 | 173 | 118 | 2 | 295 | 467 | 322 | 492 | 3.16e-17 | 85.5 |
| MS.gene070145.t1 | AT2G32250 | 30.636 | 173 | 118 | 2 | 295 | 467 | 322 | 492 | 3.27e-17 | 85.1 |
| MS.gene070145.t1 | AT2G32250 | 30.636 | 173 | 118 | 2 | 295 | 467 | 281 | 451 | 3.28e-17 | 85.1 |
| MS.gene070145.t1 | AT2G27110 | 27.922 | 154 | 108 | 1 | 289 | 442 | 198 | 348 | 3.47e-16 | 82.0 |
| MS.gene070145.t1 | AT2G27110 | 27.922 | 154 | 108 | 1 | 289 | 442 | 343 | 493 | 3.57e-16 | 82.0 |
| MS.gene070145.t1 | AT2G27110 | 27.922 | 154 | 108 | 1 | 289 | 442 | 343 | 493 | 3.57e-16 | 82.0 |
| MS.gene070145.t1 | AT4G19990 | 27.059 | 170 | 122 | 2 | 289 | 458 | 263 | 430 | 1.33e-14 | 77.0 |
| MS.gene070145.t1 | AT1G52520 | 30.769 | 156 | 103 | 4 | 289 | 442 | 393 | 545 | 1.41e-14 | 77.0 |
| MS.gene070145.t1 | AT4G19990 | 27.059 | 170 | 122 | 2 | 289 | 458 | 320 | 487 | 1.44e-14 | 77.0 |
| MS.gene070145.t1 | AT4G19990 | 27.059 | 170 | 122 | 2 | 289 | 458 | 320 | 487 | 1.44e-14 | 77.0 |
| MS.gene070145.t1 | AT4G19990 | 27.059 | 170 | 122 | 2 | 289 | 458 | 334 | 501 | 1.44e-14 | 77.0 |
| MS.gene070145.t1 | AT4G19990 | 27.059 | 170 | 122 | 2 | 289 | 458 | 320 | 487 | 1.48e-14 | 77.0 |
| MS.gene070145.t1 | AT4G19990 | 27.059 | 170 | 122 | 2 | 289 | 458 | 320 | 487 | 1.50e-14 | 77.0 |
| MS.gene070145.t1 | AT4G19990 | 27.059 | 170 | 122 | 2 | 289 | 458 | 320 | 487 | 1.50e-14 | 77.0 |
| MS.gene070145.t1 | AT3G06250 | 30.556 | 144 | 96 | 1 | 299 | 442 | 479 | 618 | 2.88e-14 | 75.9 |
| MS.gene070145.t1 | AT3G06250 | 30.556 | 144 | 96 | 1 | 299 | 442 | 479 | 618 | 2.88e-14 | 75.9 |
| MS.gene070145.t1 | AT3G06250 | 30.556 | 144 | 96 | 1 | 299 | 442 | 479 | 618 | 2.88e-14 | 75.9 |
| MS.gene070145.t1 | AT5G18960 | 30.769 | 143 | 95 | 1 | 300 | 442 | 504 | 642 | 7.43e-13 | 71.6 |
| MS.gene070145.t1 | AT5G18960 | 30.769 | 143 | 95 | 1 | 300 | 442 | 504 | 642 | 7.43e-13 | 71.6 |
| MS.gene070145.t1 | AT5G28530 | 23.529 | 204 | 142 | 5 | 97 | 295 | 50 | 244 | 2.17e-11 | 66.6 |
| MS.gene070145.t1 | AT5G28530 | 23.529 | 204 | 142 | 5 | 97 | 295 | 50 | 244 | 2.18e-11 | 66.6 |
| MS.gene070145.t1 | AT5G28530 | 23.529 | 204 | 142 | 5 | 97 | 295 | 50 | 244 | 2.18e-11 | 66.6 |
| MS.gene070145.t1 | AT5G28530 | 23.529 | 204 | 142 | 5 | 97 | 295 | 50 | 244 | 2.52e-11 | 66.6 |
| MS.gene070145.t1 | AT5G28530 | 23.529 | 204 | 142 | 5 | 97 | 295 | 50 | 244 | 2.60e-11 | 66.2 |
| MS.gene070145.t1 | AT1G80010 | 27.703 | 148 | 107 | 0 | 295 | 442 | 423 | 570 | 3.47e-11 | 66.2 |
| MS.gene070145.t1 | AT3G59470 | 31.013 | 158 | 82 | 6 | 69 | 215 | 33 | 174 | 3.96e-11 | 63.9 |
| MS.gene070145.t1 | AT3G59470 | 31.013 | 158 | 82 | 6 | 69 | 215 | 33 | 174 | 3.96e-11 | 63.9 |
| MS.gene070145.t1 | AT3G59470 | 31.013 | 158 | 82 | 6 | 69 | 215 | 45 | 186 | 4.39e-11 | 63.9 |
| MS.gene070145.t1 | AT1G10240 | 22.845 | 232 | 140 | 9 | 102 | 323 | 48 | 250 | 8.01e-11 | 65.1 |
| MS.gene070145.t1 | AT1G10240 | 22.845 | 232 | 140 | 9 | 102 | 323 | 48 | 250 | 8.01e-11 | 65.1 |
Find 88 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATCATCATTCTCATTTA+AGG | 0.082094 | 2.4:-45968740 | None:intergenic |
| CTTAACAATTGTTTCTTTCT+AGG | 0.120731 | 2.4:-45968076 | None:intergenic |
| AGCTTAATTTGGTTGAATTT+TGG | 0.141638 | 2.4:+45969001 | MS.gene070145:CDS |
| AGTATGACCTTCATAAAATT+TGG | 0.178226 | 2.4:-45968038 | None:intergenic |
| CTTGAATACGAAGCTTAATT+TGG | 0.179939 | 2.4:+45968990 | MS.gene070145:CDS |
| ACATATTCTTTCTGTATTAA+AGG | 0.199304 | 2.4:+45969377 | MS.gene070145:CDS |
| GAGAGTGAAAATTCTTTCTT+TGG | 0.202144 | 2.4:+45968961 | MS.gene070145:CDS |
| ATAGAGTGAGATTTGGTAGA+AGG | 0.280194 | 2.4:-45967255 | None:intergenic |
| CCGAAGAATTTCAATTTGAA+TGG | 0.311875 | 2.4:+45968803 | MS.gene070145:CDS |
| ATCGTTTCAAGTCATGTGTT+TGG | 0.355775 | 2.4:+45968767 | MS.gene070145:CDS |
| GAAGAAGATAGAGTGAGATT+TGG | 0.364039 | 2.4:-45967262 | None:intergenic |
| ACTGAAACAAGAGATAAAAT+TGG | 0.372858 | 2.4:+45967833 | MS.gene070145:CDS |
| CCATTCAAATTGAAATTCTT+CGG | 0.377527 | 2.4:-45968803 | None:intergenic |
| CGGCGACGGCGTCCTCTCCT+TGG | 0.408060 | 2.4:+45966702 | MS.gene070145:CDS |
| GAGATTTGGTAGAAGGTTGA+TGG | 0.408551 | 2.4:-45967248 | None:intergenic |
| GAGATAAAATTGGTGTCAAA+TGG | 0.413160 | 2.4:+45967843 | MS.gene070145:CDS |
| CAAGTCATGTGTTTGGAACT+CGG | 0.419429 | 2.4:+45968774 | MS.gene070145:CDS |
| TCTGATGCAGATATGTTCAT+TGG | 0.429259 | 2.4:+45968280 | MS.gene070145:CDS |
| CTTCCGAACACAAAGATAGA+AGG | 0.434944 | 2.4:-45967298 | None:intergenic |
| GAAAGAAACGACGGCCAAAC+TGG | 0.444589 | 2.4:+45966664 | MS.gene070145:CDS |
| TCTCCTTGGTGGTGGAAGGT+TGG | 0.446089 | 2.4:+45966716 | MS.gene070145:CDS |
| CATCCTTCTATCTTTGTGTT+CGG | 0.446673 | 2.4:+45967295 | MS.gene070145:CDS |
| GTTGGGAGTTATGAAAATAT+AGG | 0.448778 | 2.4:+45968199 | MS.gene070145:CDS |
| AAGGTTGGAGTCATCGGAAT+TGG | 0.448978 | 2.4:+45966731 | MS.gene070145:CDS |
| AAATATTGAAGGAGCAAGTT+GGG | 0.451013 | 2.4:+45968182 | MS.gene070145:CDS |
| TTTATAGATATATTTATGGC+TGG | 0.453272 | 2.4:+45968913 | MS.gene070145:CDS |
| ACATATTTCAGAGTGAGTTA+TGG | 0.453502 | 2.4:+45969166 | MS.gene070145:CDS |
| AGAGTGAAAATTCTTTCTTT+GGG | 0.454732 | 2.4:+45968962 | MS.gene070145:CDS |
| TAGGAATATTTGTATGGAGA+TGG | 0.458385 | 2.4:+45967619 | MS.gene070145:intron |
| GTGTTTGATACTTTGAAAGA+AGG | 0.463048 | 2.4:+45967755 | MS.gene070145:CDS |
| TGTTTGATACTTTGAAAGAA+GGG | 0.465644 | 2.4:+45967756 | MS.gene070145:CDS |
| CAAATATTGAAGGAGCAAGT+TGG | 0.466116 | 2.4:+45968181 | MS.gene070145:CDS |
| GTCCTCTCCTTGGTGGTGGA+AGG | 0.473326 | 2.4:+45966712 | MS.gene070145:CDS |
| TGGAATTGAAGGAACAAAAC+AGG | 0.473791 | 2.4:+45969206 | MS.gene070145:CDS |
| CTCAAAAGAAGGATTTAAAG+TGG | 0.479356 | 2.4:+45967880 | MS.gene070145:CDS |
| CGGCGTCCTCTCCTTGGTGG+TGG | 0.488750 | 2.4:+45966708 | MS.gene070145:CDS |
| TTCAGCTCAGCATCACACTT+TGG | 0.492382 | 2.4:-45967716 | None:intergenic |
| CTTGATAATGTTGTGGTGAA+TGG | 0.495594 | 2.4:+45969255 | MS.gene070145:CDS |
| TTGAGTTTGAAGAAAATGGT+TGG | 0.496836 | 2.4:+45968845 | MS.gene070145:CDS |
| TCGACGTGCATCCTCAAAGC+TGG | 0.514623 | 2.4:-45969099 | None:intergenic |
| CGACGGCGTCCTCTCCTTGG+TGG | 0.520922 | 2.4:+45966705 | MS.gene070145:CDS |
| AATATATCTATAAAATAAGC+TGG | 0.526487 | 2.4:-45968904 | None:intergenic |
| AAAGAAACAATTGTTAAGAT+CGG | 0.526889 | 2.4:+45968081 | MS.gene070145:CDS |
| TGGTGGAAGGTTGGAGTCAT+CGG | 0.527480 | 2.4:+45966725 | MS.gene070145:CDS |
| AAAGATAGATAAGCCTGGAT+TGG | 0.527667 | 2.4:+45967907 | MS.gene070145:CDS |
| TGTGTAAATTGTGGAATTGA+AGG | 0.530191 | 2.4:+45969195 | MS.gene070145:CDS |
| TCGATTTAGAGAAGCATGGT+AGG | 0.530992 | 2.4:+45969118 | MS.gene070145:CDS |
| TAGAAAACAAGTCGGAGGAA+TGG | 0.535352 | 2.4:+45967690 | MS.gene070145:CDS |
| GTTGGAGTCATCGGAATTGG+TGG | 0.536767 | 2.4:+45966734 | MS.gene070145:CDS |
| AAAAGAAATTTGACACGGGA+GGG | 0.541490 | 2.4:+45967962 | MS.gene070145:CDS |
| AACGACGGCCAAACTGGTGG+GGG | 0.549380 | 2.4:+45966670 | MS.gene070145:CDS |
| AGAAACGACGGCCAAACTGG+TGG | 0.550648 | 2.4:+45966667 | MS.gene070145:CDS |
| GAAAGGTTATCAAATATTGA+AGG | 0.553791 | 2.4:+45968171 | MS.gene070145:CDS |
| TTCTATACTTGATAATGTTG+TGG | 0.554606 | 2.4:+45969248 | MS.gene070145:CDS |
| TCATCACTAATAACCAATCC+AGG | 0.557233 | 2.4:-45967920 | None:intergenic |
| AAAGAGTGCGACCATGGTGG+AGG | 0.557746 | 2.4:+45966642 | None:intergenic |
| GCTGAGCTGAAACCTGTGAT+TGG | 0.560694 | 2.4:+45967728 | MS.gene070145:CDS |
| TGGAATGCATGTGTAAATTG+TGG | 0.561229 | 2.4:+45969186 | MS.gene070145:CDS |
| TTCAAATTGAAATTCTTCGG+AGG | 0.564046 | 2.4:-45968800 | None:intergenic |
| TCAAACACCTTACCAATCAC+AGG | 0.564058 | 2.4:-45967740 | None:intergenic |
| GTCGTTTCTTTCCTCCACCA+TGG | 0.570531 | 2.4:-45966653 | None:intergenic |
| ACACAAAGATAGAAGGATGC+GGG | 0.571202 | 2.4:-45967291 | None:intergenic |
| GTTTGATACTTTGAAAGAAG+GGG | 0.571831 | 2.4:+45967757 | MS.gene070145:CDS |
| GTAGAAGGTTGATGGCATAG+AGG | 0.583703 | 2.4:-45967240 | None:intergenic |
| GCTAATGTGGGAACTTCGAA+AGG | 0.586629 | 2.4:+45968154 | MS.gene070145:CDS |
| AAACGACGGCCAAACTGGTG+GGG | 0.590815 | 2.4:+45966669 | MS.gene070145:CDS |
| TCCTCAAAGCTGGAAAAGAG+TGG | 0.595349 | 2.4:-45969089 | None:intergenic |
| TGCTTGCAATAGAGCTAATG+TGG | 0.597170 | 2.4:+45968141 | MS.gene070145:CDS |
| AACACAAAGATAGAAGGATG+CGG | 0.607206 | 2.4:-45967292 | None:intergenic |
| CGATTTAGAGAAGCATGGTA+GGG | 0.608691 | 2.4:+45969119 | MS.gene070145:CDS |
| GAAACGACGGCCAAACTGGT+GGG | 0.611644 | 2.4:+45966668 | MS.gene070145:CDS |
| GCTGAAACCTGTGATTGGTA+AGG | 0.614029 | 2.4:+45967733 | MS.gene070145:CDS |
| AACTCATCGAATTCTTCTGT+AGG | 0.615846 | 2.4:-45967668 | None:intergenic |
| GTGTTCAAGAGAATTGATGA+TGG | 0.619383 | 2.4:+45968001 | MS.gene070145:CDS |
| CACGGGAGGGATGTAATGCA+AGG | 0.621834 | 2.4:+45967975 | MS.gene070145:CDS |
| AACCTTCCACCACCAAGGAG+AGG | 0.633136 | 2.4:-45966714 | None:intergenic |
| GCTTGCAATAGAGCTAATGT+GGG | 0.639050 | 2.4:+45968142 | MS.gene070145:CDS |
| CGATGAGTTAGAAAACAAGT+CGG | 0.649037 | 2.4:+45967682 | MS.gene070145:CDS |
| ACAGAAAGAATATGTCGACA+TGG | 0.652936 | 2.4:-45969369 | None:intergenic |
| AACAATTGTTAAGATCGGCA+AGG | 0.654408 | 2.4:+45968086 | MS.gene070145:CDS |
| TGAGTTAGAAAACAAGTCGG+AGG | 0.661664 | 2.4:+45967685 | MS.gene070145:CDS |
| ACTCCAACCTTCCACCACCA+AGG | 0.663199 | 2.4:-45966719 | None:intergenic |
| CACGTCGATTTAGAGAAGCA+TGG | 0.677798 | 2.4:+45969114 | MS.gene070145:CDS |
| AAACTTTCAGAAAAGGTGGG+TGG | 0.688648 | 2.4:+45968715 | MS.gene070145:intron |
| TGTATGATCTTAGAAGCATG+TGG | 0.692695 | 2.4:+45968878 | MS.gene070145:CDS |
| TGTTGTGGTGAATGGCACAA+AGG | 0.693543 | 2.4:+45969263 | MS.gene070145:CDS |
| ATGGTGGAGGAAAGAAACGA+CGG | 0.724104 | 2.4:+45966655 | MS.gene070145:CDS |
| ATTCTGCTTTAGAAGCACAG+AGG | 0.733258 | 2.4:+45969034 | MS.gene070145:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+AGG | + | chr2.4:45966981-45967000 | MS.gene070145:intron | 0.0% |
| !! | ATATATATATATATATATAT+AGG | - | chr2.4:45967000-45966981 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+GGG | + | chr2.4:45966980-45966999 | MS.gene070145:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | - | chr2.4:45966999-45966980 | None:intergenic | 0.0% |
| !! | TATATATATATATATATAGG+GGG | + | chr2.4:45966994-45967013 | MS.gene070145:intron | 10.0% |
| !! | TATATATATATATATATAGG+GGG | - | chr2.4:45967013-45966994 | None:intergenic | 10.0% |
| !!! | AAATTTCTTTTTCTATTTTT+AGG | - | chr2.4:45967953-45967972 | None:intergenic | 10.0% |
| !! | AAAAATAAACAATTGCTATA+TGG | - | chr2.4:45967584-45967603 | None:intergenic | 15.0% |
| !! | AATATATCTATAAAATAAGC+TGG | - | chr2.4:45968907-45968926 | None:intergenic | 15.0% |
| !! | AGAAAATAATATAAACATAG+GGG | - | chr2.4:45967347-45967366 | None:intergenic | 15.0% |
| !! | CAGAAAATAATATAAACATA+GGG | - | chr2.4:45967348-45967367 | None:intergenic | 15.0% |
| !!! | TATTTTTAGGAATATTTGTA+TGG | + | chr2.4:45967613-45967632 | MS.gene070145:intron | 15.0% |
| !!! | TTTTTGTTGTGTTTATTTTT+AGG | + | chr2.4:45967600-45967619 | MS.gene070145:intron | 15.0% |
| !! | AAAATCATCATTCTCATTTA+AGG | - | chr2.4:45968743-45968762 | None:intergenic | 20.0% |
| !! | AAAGAAACAATTGTTAAGAT+CGG | + | chr2.4:45968081-45968100 | MS.gene070145:CDS | 20.0% |
| !! | ATAGAAAAAGAAATTTGACA+CGG | + | chr2.4:45967957-45967976 | MS.gene070145:CDS | 20.0% |
| !! | GCAGAAAATAATATAAACAT+AGG | - | chr2.4:45967349-45967368 | None:intergenic | 20.0% |
| !! | TCTTAAAAAACTTTCAGAAA+AGG | + | chr2.4:45968708-45968727 | MS.gene070145:intron | 20.0% |
| !! | TTTATAGATATATTTATGGC+TGG | + | chr2.4:45968913-45968932 | MS.gene070145:CDS | 20.0% |
| !!! | CAATTGAAAGTGTTTTTAAT+GGG | + | chr2.4:45968656-45968675 | MS.gene070145:intron | 20.0% |
| !!! | GAGATTTTCAAAAAAATTCA+AGG | + | chr2.4:45968233-45968252 | MS.gene070145:CDS | 20.0% |
| !!! | TTAAGTTTAATTTGTAGCTT+TGG | + | chr2.4:45967465-45967484 | MS.gene070145:intron | 20.0% |
| ! | AAAAAACTTTCAGAAAAGGT+GGG | + | chr2.4:45968712-45968731 | MS.gene070145:intron | 25.0% |
| ! | ACTGAAACAAGAGATAAAAT+TGG | + | chr2.4:45967833-45967852 | MS.gene070145:CDS | 25.0% |
| ! | AGAGTGAAAATTCTTTCTTT+GGG | + | chr2.4:45968962-45968981 | MS.gene070145:CDS | 25.0% |
| ! | AGTATGACCTTCATAAAATT+TGG | - | chr2.4:45968041-45968060 | None:intergenic | 25.0% |
| ! | AGTTATTATACACGTAAGTA+TGG | + | chr2.4:45967402-45967421 | MS.gene070145:intron | 25.0% |
| ! | CCATTCAAATTGAAATTCTT+CGG | - | chr2.4:45968806-45968825 | None:intergenic | 25.0% |
| ! | CGAAAAAATTACTCTTTGTT+TGG | + | chr2.4:45968406-45968425 | MS.gene070145:intron | 25.0% |
| ! | GAAAAAGAACAATGAGAATA+TGG | - | chr2.4:45967177-45967196 | None:intergenic | 25.0% |
| ! | GAAAGGTTATCAAATATTGA+AGG | + | chr2.4:45968171-45968190 | MS.gene070145:CDS | 25.0% |
| ! | TAAAAAACTTTCAGAAAAGG+TGG | + | chr2.4:45968711-45968730 | MS.gene070145:intron | 25.0% |
| ! | TAGAAAAAGAAATTTGACAC+GGG | + | chr2.4:45967958-45967977 | MS.gene070145:CDS | 25.0% |
| ! | TATATCTAAAAGATGGAGTT+TGG | + | chr2.4:45967512-45967531 | MS.gene070145:intron | 25.0% |
| ! | TGATCTGTTATTATCATAAC+AGG | - | chr2.4:45968616-45968635 | None:intergenic | 25.0% |
| ! | TTGTAACCATCAGATTAAAA+AGG | - | chr2.4:45966908-45966927 | None:intergenic | 25.0% |
| !! | ATTATGTGTCTGATAATGAA+GGG | + | chr2.4:45968347-45968366 | MS.gene070145:intron | 25.0% |
| !! | CTTAACAATTGTTTCTTTCT+AGG | - | chr2.4:45968079-45968098 | None:intergenic | 25.0% |
| !! | GAAGTTAAAACATGTGTTTT+GGG | + | chr2.4:45968369-45968388 | MS.gene070145:intron | 25.0% |
| !! | TATTTTCTTTGCTCAAAAGA+AGG | + | chr2.4:45967869-45967888 | MS.gene070145:CDS | 25.0% |
| !! | TGTTTGATACTTTGAAAGAA+GGG | + | chr2.4:45967756-45967775 | MS.gene070145:CDS | 25.0% |
| !! | TTCTCATTGTTCTTTTTCTT+TGG | + | chr2.4:45967179-45967198 | MS.gene070145:intron | 25.0% |
| !!! | AGCTTAATTTGGTTGAATTT+TGG | + | chr2.4:45969001-45969020 | MS.gene070145:CDS | 25.0% |
| !!! | GATTTTGAGTTTGAAGAAAA+TGG | + | chr2.4:45968841-45968860 | MS.gene070145:CDS | 25.0% |
| !!! | GCAATTGAAAGTGTTTTTAA+TGG | + | chr2.4:45968655-45968674 | MS.gene070145:intron | 25.0% |
| !!! | TTCTATACTTGATAATGTTG+TGG | + | chr2.4:45969248-45969267 | MS.gene070145:CDS | 25.0% |
| AAAAATTATGCTCATGTTGC+TGG | + | chr2.4:45967791-45967810 | MS.gene070145:CDS | 30.0% | |
| AAATATTGAAGGAGCAAGTT+GGG | + | chr2.4:45968182-45968201 | MS.gene070145:CDS | 30.0% | |
| AACCATCAGATTAAAAAGGA+AGG | - | chr2.4:45966904-45966923 | None:intergenic | 30.0% | |
| ACATATTTCAGAGTGAGTTA+TGG | + | chr2.4:45969166-45969185 | MS.gene070145:CDS | 30.0% | |
| ACCATCAGATTAAAAAGGAA+GGG | - | chr2.4:45966903-45966922 | None:intergenic | 30.0% | |
| AGAACAATGAGAATATGGAA+AGG | - | chr2.4:45967172-45967191 | None:intergenic | 30.0% | |
| AGTCATTAGATTATGTGCAA+GGG | + | chr2.4:45967068-45967087 | MS.gene070145:intron | 30.0% | |
| ATCGTCAAAGTATAACCTTT+GGG | + | chr2.4:45968509-45968528 | MS.gene070145:intron | 30.0% | |
| CCGAAGAATTTCAATTTGAA+TGG | + | chr2.4:45968803-45968822 | MS.gene070145:CDS | 30.0% | |
| CTCAAAAGAAGGATTTAAAG+TGG | + | chr2.4:45967880-45967899 | MS.gene070145:CDS | 30.0% | |
| CTTGAATACGAAGCTTAATT+TGG | + | chr2.4:45968990-45969009 | MS.gene070145:CDS | 30.0% | |
| GAAAAAAAGATAGATAAGCC+TGG | + | chr2.4:45967902-45967921 | MS.gene070145:CDS | 30.0% | |
| GAGAGTGAAAATTCTTTCTT+TGG | + | chr2.4:45968961-45968980 | MS.gene070145:CDS | 30.0% | |
| GTTGGGAGTTATGAAAATAT+AGG | + | chr2.4:45968199-45968218 | MS.gene070145:CDS | 30.0% | |
| TAGGAATATTTGTATGGAGA+TGG | + | chr2.4:45967619-45967638 | MS.gene070145:intron | 30.0% | |
| TGTAAAATGTTTGACTCTGA+AGG | + | chr2.4:45969342-45969361 | MS.gene070145:intron | 30.0% | |
| TGTGTAAATTGTGGAATTGA+AGG | + | chr2.4:45969195-45969214 | MS.gene070145:CDS | 30.0% | |
| TTCAAATTGAAATTCTTCGG+AGG | - | chr2.4:45968803-45968822 | None:intergenic | 30.0% | |
| TTGAGTTTGAAGAAAATGGT+TGG | + | chr2.4:45968845-45968864 | MS.gene070145:CDS | 30.0% | |
| ! | CAAGTGAGAATGACATTTTT+AGG | - | chr2.4:45966950-45966969 | None:intergenic | 30.0% |
| ! | GATTATGTGTCTGATAATGA+AGG | + | chr2.4:45968346-45968365 | MS.gene070145:intron | 30.0% |
| ! | GGAAGTTAAAACATGTGTTT+TGG | + | chr2.4:45968368-45968387 | MS.gene070145:intron | 30.0% |
| ! | GTGTTTGATACTTTGAAAGA+AGG | + | chr2.4:45967755-45967774 | MS.gene070145:CDS | 30.0% |
| ! | GTTTGATACTTTGAAAGAAG+GGG | + | chr2.4:45967757-45967776 | MS.gene070145:CDS | 30.0% |
| ! | TGAAAAAGATGAGTTGAGAT+TGG | + | chr2.4:45966841-45966860 | MS.gene070145:intron | 30.0% |
| !! | AGTTTAATTTGTAGCTTTGG+TGG | + | chr2.4:45967468-45967487 | MS.gene070145:intron | 30.0% |
| !! | GAAGTGTCCAAATTTTATGA+AGG | + | chr2.4:45968031-45968050 | MS.gene070145:CDS | 30.0% |
| !! | GAGATAAAATTGGTGTCAAA+TGG | + | chr2.4:45967843-45967862 | MS.gene070145:CDS | 30.0% |
| !!! | ATGACATTTTTAGGTGAGAA+TGG | - | chr2.4:45966941-45966960 | None:intergenic | 30.0% |
| !!! | GAGACTTTTTTGAAAGCAAT+GGG | + | chr2.4:45968580-45968599 | MS.gene070145:intron | 30.0% |
| !!! | TGAGACTTTTTTGAAAGCAA+TGG | + | chr2.4:45968579-45968598 | MS.gene070145:intron | 30.0% |
| AAAAAGAAATTTGACACGGG+AGG | + | chr2.4:45967961-45967980 | MS.gene070145:CDS | 35.0% | |
| AAAAAGAAGAGTCGTTTGTG+TGG | + | chr2.4:45968551-45968570 | MS.gene070145:intron | 35.0% | |
| AAAAGAAATTTGACACGGGA+GGG | + | chr2.4:45967962-45967981 | MS.gene070145:CDS | 35.0% | |
| AAAGATAGATAAGCCTGGAT+TGG | + | chr2.4:45967907-45967926 | MS.gene070145:CDS | 35.0% | |
| AACAATTGTTAAGATCGGCA+AGG | + | chr2.4:45968086-45968105 | MS.gene070145:CDS | 35.0% | |
| AACACAAAGATAGAAGGATG+CGG | - | chr2.4:45967295-45967314 | None:intergenic | 35.0% | |
| AACTCATCGAATTCTTCTGT+AGG | - | chr2.4:45967671-45967690 | None:intergenic | 35.0% | |
| ACAGAAAGAATATGTCGACA+TGG | - | chr2.4:45969372-45969391 | None:intergenic | 35.0% | |
| ATGGGTAAGTTATGTGAGAA+TGG | + | chr2.4:45967031-45967050 | MS.gene070145:intron | 35.0% | |
| CAAATATTGAAGGAGCAAGT+TGG | + | chr2.4:45968181-45968200 | MS.gene070145:CDS | 35.0% | |
| CACGTGCTATATCTAAAAGA+TGG | + | chr2.4:45967505-45967524 | MS.gene070145:intron | 35.0% | |
| CAGTCATTAGATTATGTGCA+AGG | + | chr2.4:45967067-45967086 | MS.gene070145:intron | 35.0% | |
| CATCCTTCTATCTTTGTGTT+CGG | + | chr2.4:45967295-45967314 | MS.gene070145:CDS | 35.0% | |
| CATCGTCAAAGTATAACCTT+TGG | + | chr2.4:45968508-45968527 | MS.gene070145:intron | 35.0% | |
| CGATGAGTTAGAAAACAAGT+CGG | + | chr2.4:45967682-45967701 | MS.gene070145:CDS | 35.0% | |
| CTAGTACATGCATGTGTTTA+AGG | + | chr2.4:45967433-45967452 | MS.gene070145:intron | 35.0% | |
| CTTAAACACATGCATGTACT+AGG | - | chr2.4:45967435-45967454 | None:intergenic | 35.0% | |
| GAAGAAGATAGAGTGAGATT+TGG | - | chr2.4:45967265-45967284 | None:intergenic | 35.0% | |
| GAAGGGCTGAGATTAAAAAT+AGG | - | chr2.4:45966886-45966905 | None:intergenic | 35.0% | |
| GATAATAACAGATCAAGACC+AGG | + | chr2.4:45968621-45968640 | MS.gene070145:intron | 35.0% | |
| GTGTTCAAGAGAATTGATGA+TGG | + | chr2.4:45968001-45968020 | MS.gene070145:CDS | 35.0% | |
| TCATCACTAATAACCAATCC+AGG | - | chr2.4:45967923-45967942 | None:intergenic | 35.0% | |
| TCGTCAAAGTATAACCTTTG+GGG | + | chr2.4:45968510-45968529 | MS.gene070145:intron | 35.0% | |
| TCTGATGCAGATATGTTCAT+TGG | + | chr2.4:45968280-45968299 | MS.gene070145:CDS | 35.0% | |
| TGGAATGCATGTGTAAATTG+TGG | + | chr2.4:45969186-45969205 | MS.gene070145:CDS | 35.0% | |
| TGGAATTGAAGGAACAAAAC+AGG | + | chr2.4:45969206-45969225 | MS.gene070145:CDS | 35.0% | |
| TTGACGATGATGATTTACAC+CGG | - | chr2.4:45968497-45968516 | None:intergenic | 35.0% | |
| ! | AAGATTTTTGCACCATTCAC+CGG | + | chr2.4:45968475-45968494 | MS.gene070145:intron | 35.0% |
| ! | ATAGAGTGAGATTTGGTAGA+AGG | - | chr2.4:45967258-45967277 | None:intergenic | 35.0% |
| ! | ATCGTTTCAAGTCATGTGTT+TGG | + | chr2.4:45968767-45968786 | MS.gene070145:CDS | 35.0% |
| ! | ATTTTCACTCTCTGATCTTG+AGG | - | chr2.4:45968953-45968972 | None:intergenic | 35.0% |
| ! | CTTCTCATAGATTTTGCATG+TGG | + | chr2.4:45968680-45968699 | MS.gene070145:intron | 35.0% |
| ! | TGTATGATCTTAGAAGCATG+TGG | + | chr2.4:45968878-45968897 | MS.gene070145:CDS | 35.0% |
| ! | TTACTCTTTGTTTGGAGATG+TGG | + | chr2.4:45968414-45968433 | MS.gene070145:intron | 35.0% |
| !! | CTTGATAATGTTGTGGTGAA+TGG | + | chr2.4:45969255-45969274 | MS.gene070145:CDS | 35.0% |
| !!! | ACTTTTTTGAAAGCAATGGG+TGG | + | chr2.4:45968583-45968602 | MS.gene070145:intron | 35.0% |
| !!! | CATTTTTAGGTGAGAATGGT+AGG | - | chr2.4:45966937-45966956 | None:intergenic | 35.0% |
| !!! | CTTTTTTGAAAGCAATGGGT+GGG | + | chr2.4:45968584-45968603 | MS.gene070145:intron | 35.0% |
| AAACTTTCAGAAAAGGTGGG+TGG | + | chr2.4:45968715-45968734 | MS.gene070145:intron | 40.0% | |
| AAGAAGAGTCAAACAGGAAG+GGG | + | chr2.4:45966771-45966790 | MS.gene070145:intron | 40.0% | |
| ACACAAAGATAGAAGGATGC+GGG | - | chr2.4:45967294-45967313 | None:intergenic | 40.0% | |
| ATGTAAAAATGCAGCCCCAA+AGG | - | chr2.4:45968527-45968546 | None:intergenic | 40.0% | |
| CAATTGCATTTGTCATAGCC+TGG | - | chr2.4:45968642-45968661 | None:intergenic | 40.0% | |
| CTTCCGAACACAAAGATAGA+AGG | - | chr2.4:45967301-45967320 | None:intergenic | 40.0% | |
| GAAGAAGAGTCAAACAGGAA+GGG | + | chr2.4:45966770-45966789 | MS.gene070145:intron | 40.0% | |
| GAAGAGAGATGTCACATGAT+TGG | - | chr2.4:45967128-45967147 | None:intergenic | 40.0% | |
| GCTTGCAATAGAGCTAATGT+GGG | + | chr2.4:45968142-45968161 | MS.gene070145:CDS | 40.0% | |
| TAGAAAACAAGTCGGAGGAA+TGG | + | chr2.4:45967690-45967709 | MS.gene070145:CDS | 40.0% | |
| TCAAACACCTTACCAATCAC+AGG | - | chr2.4:45967743-45967762 | None:intergenic | 40.0% | |
| TGAGTTAGAAAACAAGTCGG+AGG | + | chr2.4:45967685-45967704 | MS.gene070145:CDS | 40.0% | |
| TGATGATTTACACCGGTGAA+TGG | - | chr2.4:45968490-45968509 | None:intergenic | 40.0% | |
| TGCTTGCAATAGAGCTAATG+TGG | + | chr2.4:45968141-45968160 | MS.gene070145:CDS | 40.0% | |
| ! | CAAGTCATGTGTTTGGAACT+CGG | + | chr2.4:45968774-45968793 | MS.gene070145:CDS | 40.0% |
| ! | CGATTTAGAGAAGCATGGTA+GGG | + | chr2.4:45969119-45969138 | MS.gene070145:CDS | 40.0% |
| ! | GAGATTTGGTAGAAGGTTGA+TGG | - | chr2.4:45967251-45967270 | None:intergenic | 40.0% |
| ! | GCCCTTCCTTTTTAATCTGA+TGG | + | chr2.4:45966899-45966918 | MS.gene070145:intron | 40.0% |
| ! | TCGATTTAGAGAAGCATGGT+AGG | + | chr2.4:45969118-45969137 | MS.gene070145:CDS | 40.0% |
| !! | AAACATGTGTTTTGGGCTGA+TGG | + | chr2.4:45968376-45968395 | MS.gene070145:intron | 40.0% |
| !! | AATTGGTGGTGAAAAGTGAG+GGG | + | chr2.4:45966748-45966767 | MS.gene070145:intron | 40.0% |
| !! | ATTCTGCTTTAGAAGCACAG+AGG | + | chr2.4:45969034-45969053 | MS.gene070145:CDS | 40.0% |
| !! | GAATTGGTGGTGAAAAGTGA+GGG | + | chr2.4:45966747-45966766 | MS.gene070145:intron | 40.0% |
| !!! | TTGTAGCTTTGGTGGAGTTT+TGG | + | chr2.4:45967476-45967495 | MS.gene070145:intron | 40.0% |
| AAGGTTGGAGTCATCGGAAT+TGG | + | chr2.4:45966731-45966750 | MS.gene070145:CDS | 45.0% | |
| AGAAGAGTCAAACAGGAAGG+GGG | + | chr2.4:45966772-45966791 | MS.gene070145:intron | 45.0% | |
| GCTAATGTGGGAACTTCGAA+AGG | + | chr2.4:45968154-45968173 | MS.gene070145:CDS | 45.0% | |
| GCTGAAACCTGTGATTGGTA+AGG | + | chr2.4:45967733-45967752 | MS.gene070145:CDS | 45.0% | |
| GGAAGAAGAGTCAAACAGGA+AGG | + | chr2.4:45966769-45966788 | MS.gene070145:intron | 45.0% | |
| GGGAGAATAGGAAACGTTGA+AGG | + | chr2.4:45966797-45966816 | MS.gene070145:intron | 45.0% | |
| GGGGCATATCACATGAGAAT+GGG | + | chr2.4:45967013-45967032 | MS.gene070145:intron | 45.0% | |
| GTATGTGATGCACGTGTGTT+TGG | - | chr2.4:45967150-45967169 | None:intergenic | 45.0% | |
| TCCTCAAAGCTGGAAAAGAG+TGG | - | chr2.4:45969092-45969111 | None:intergenic | 45.0% | |
| TGTTGTGGTGAATGGCACAA+AGG | + | chr2.4:45969263-45969282 | MS.gene070145:CDS | 45.0% | |
| TTCAGCTCAGCATCACACTT+TGG | - | chr2.4:45967719-45967738 | None:intergenic | 45.0% | |
| ! | ATGGTGGAGGAAAGAAACGA+CGG | + | chr2.4:45966655-45966674 | MS.gene070145:CDS | 45.0% |
| ! | TCCACTCTTTTCCAGCTTTG+AGG | + | chr2.4:45969088-45969107 | MS.gene070145:CDS | 45.0% |
| !! | CACGTCGATTTAGAGAAGCA+TGG | + | chr2.4:45969114-45969133 | MS.gene070145:CDS | 45.0% |
| !! | GGAATTGGTGGTGAAAAGTG+AGG | + | chr2.4:45966746-45966765 | MS.gene070145:intron | 45.0% |
| !! | GTAGAAGGTTGATGGCATAG+AGG | - | chr2.4:45967243-45967262 | None:intergenic | 45.0% |
| !! | ATATATATATATATATATAG+GGG | + | chr2.4:45966993-45967012 | MS.gene070145:intron | 5.0% |
| !! | ATATATATATATATATATAG+GGG | - | chr2.4:45967012-45966993 | None:intergenic | 5.0% |
| !!! | TTATTTTATAGATATATTTA+TGG | + | chr2.4:45968909-45968928 | MS.gene070145:CDS | 5.0% |
| AGTCAAACAGGAAGGGGGAA+GGG | + | chr2.4:45966777-45966796 | MS.gene070145:intron | 50.0% | |
| GAAAGAAACGACGGCCAAAC+TGG | + | chr2.4:45966664-45966683 | MS.gene070145:CDS | 50.0% | |
| GAGGGGAAGAAGAGTCAAAC+AGG | + | chr2.4:45966765-45966784 | MS.gene070145:intron | 50.0% | |
| GCTGAGCTGAAACCTGTGAT+TGG | + | chr2.4:45967728-45967747 | MS.gene070145:CDS | 50.0% | |
| GTTGGAGTCATCGGAATTGG+TGG | + | chr2.4:45966734-45966753 | MS.gene070145:CDS | 50.0% | |
| TGGTGGAAGGTTGGAGTCAT+CGG | + | chr2.4:45966725-45966744 | MS.gene070145:CDS | 50.0% | |
| ! | GGGGGCATATCACATGAGAA+TGG | + | chr2.4:45967012-45967031 | MS.gene070145:intron | 50.0% |
| AAACGACGGCCAAACTGGTG+GGG | + | chr2.4:45966669-45966688 | MS.gene070145:CDS | 55.0% | |
| AACCTTCCACCACCAAGGAG+AGG | - | chr2.4:45966717-45966736 | None:intergenic | 55.0% | |
| ACTCCAACCTTCCACCACCA+AGG | - | chr2.4:45966722-45966741 | None:intergenic | 55.0% | |
| AGAAACGACGGCCAAACTGG+TGG | + | chr2.4:45966667-45966686 | MS.gene070145:CDS | 55.0% | |
| AGGAAGGGGGAAGGGAGAAT+AGG | + | chr2.4:45966785-45966804 | MS.gene070145:intron | 55.0% | |
| CACGGGAGGGATGTAATGCA+AGG | + | chr2.4:45967975-45967994 | MS.gene070145:CDS | 55.0% | |
| GAAACGACGGCCAAACTGGT+GGG | + | chr2.4:45966668-45966687 | MS.gene070145:CDS | 55.0% | |
| GAGTCAAACAGGAAGGGGGA+AGG | + | chr2.4:45966776-45966795 | MS.gene070145:intron | 55.0% | |
| TCGACGTGCATCCTCAAAGC+TGG | - | chr2.4:45969102-45969121 | None:intergenic | 55.0% | |
| !! | TCTCCTTGGTGGTGGAAGGT+TGG | + | chr2.4:45966716-45966735 | MS.gene070145:CDS | 55.0% |
| AACGACGGCCAAACTGGTGG+GGG | + | chr2.4:45966670-45966689 | MS.gene070145:CDS | 60.0% | |
| !! | GTCCTCTCCTTGGTGGTGGA+AGG | + | chr2.4:45966712-45966731 | MS.gene070145:CDS | 60.0% |
| ACGGCCAAACTGGTGGGGGA+GGG | + | chr2.4:45966674-45966693 | MS.gene070145:CDS | 65.0% | |
| CAAACTGGTGGGGGAGGGGA+AGG | + | chr2.4:45966679-45966698 | MS.gene070145:CDS | 65.0% | |
| CTTCCCCTCCCCCACCAGTT+TGG | - | chr2.4:45966681-45966700 | None:intergenic | 65.0% | |
| ACTGGTGGGGGAGGGGAAGG+CGG | + | chr2.4:45966682-45966701 | MS.gene070145:CDS | 70.0% | |
| CGACGGCGTCCTCTCCTTGG+TGG | + | chr2.4:45966705-45966724 | MS.gene070145:CDS | 70.0% | |
| CGGCCAAACTGGTGGGGGAG+GGG | + | chr2.4:45966675-45966694 | MS.gene070145:CDS | 70.0% | |
| CGGCGTCCTCTCCTTGGTGG+TGG | + | chr2.4:45966708-45966727 | MS.gene070145:CDS | 70.0% | |
| GACGGCCAAACTGGTGGGGG+AGG | + | chr2.4:45966673-45966692 | MS.gene070145:CDS | 70.0% | |
| CGGCGACGGCGTCCTCTCCT+TGG | + | chr2.4:45966702-45966721 | MS.gene070145:CDS | 75.0% | |
| ! | GGGGGAGGGGAAGGCGGCGA+CGG | + | chr2.4:45966688-45966707 | MS.gene070145:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 45966655 | 45969396 | 45966655 | ID=MS.gene070145 |
| chr2.4 | mRNA | 45966655 | 45969396 | 45966655 | ID=MS.gene070145.t1;Parent=MS.gene070145 |
| chr2.4 | exon | 45966655 | 45966755 | 45966655 | ID=MS.gene070145.t1.exon1;Parent=MS.gene070145.t1 |
| chr2.4 | CDS | 45966655 | 45966755 | 45966655 | ID=cds.MS.gene070145.t1;Parent=MS.gene070145.t1 |
| chr2.4 | exon | 45967240 | 45967323 | 45967240 | ID=MS.gene070145.t1.exon2;Parent=MS.gene070145.t1 |
| chr2.4 | CDS | 45967240 | 45967323 | 45967240 | ID=cds.MS.gene070145.t1;Parent=MS.gene070145.t1 |
| chr2.4 | exon | 45967622 | 45968301 | 45967622 | ID=MS.gene070145.t1.exon3;Parent=MS.gene070145.t1 |
| chr2.4 | CDS | 45967622 | 45968301 | 45967622 | ID=cds.MS.gene070145.t1;Parent=MS.gene070145.t1 |
| chr2.4 | exon | 45968725 | 45969284 | 45968725 | ID=MS.gene070145.t1.exon4;Parent=MS.gene070145.t1 |
| chr2.4 | CDS | 45968725 | 45969284 | 45968725 | ID=cds.MS.gene070145.t1;Parent=MS.gene070145.t1 |
| chr2.4 | exon | 45969364 | 45969396 | 45969364 | ID=MS.gene070145.t1.exon5;Parent=MS.gene070145.t1 |
| chr2.4 | CDS | 45969364 | 45969396 | 45969364 | ID=cds.MS.gene070145.t1;Parent=MS.gene070145.t1 |
| Gene Sequence |
| Protein sequence |