AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene070237

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene070237.t1 MTR_4g128190 60.625 320 43 6 1 320 1 237 3.69e-116 337
MS.gene070237.t1 MTR_4g128190 54.887 133 16 1 234 366 151 239 4.76e-34 126
MS.gene070237.t1 MTR_5g062790 59.752 323 81 9 1 320 1 277 7.70e-112 328
MS.gene070237.t1 MTR_5g062790 70.312 64 13 2 309 366 216 279 1.97e-17 82.4
MS.gene070237.t1 MTR_5g088640 70.248 242 51 7 13 252 13 235 1.75e-109 321
MS.gene070237.t1 MTR_5g488170 69.874 239 53 6 13 250 13 233 2.90e-109 320
MS.gene070237.t1 MTR_5g088080 70.042 237 52 6 13 248 13 231 1.06e-108 319
MS.gene070237.t1 MTR_5g088150 70.042 237 52 6 13 248 13 231 1.06e-108 319
MS.gene070237.t1 MTR_5g488210 70.042 237 52 6 13 248 13 231 1.06e-108 319
MS.gene070237.t1 MTR_1g085770 55.937 320 104 8 1 317 1 286 2.21e-100 299
MS.gene070237.t1 MTR_5g088610 51.187 379 125 8 1 366 1 332 8.43e-100 300
MS.gene070237.t1 MTR_1g085880 62.069 203 64 5 1 201 1 192 4.05e-71 221
MS.gene070237.t1 MTR_1g021230 43.787 169 91 3 12 178 57 223 2.47e-39 145
MS.gene070237.t1 MTR_3g011610 40.854 164 94 3 11 172 36 198 6.62e-39 145
MS.gene070237.t1 MTR_3g052430 46.980 149 77 2 12 159 41 188 1.45e-38 144
MS.gene070237.t1 MTR_1g083630 43.069 202 100 7 1 192 1 197 6.05e-38 144
MS.gene070237.t1 MTR_3g052450 47.651 149 73 3 12 159 40 184 1.07e-37 142
MS.gene070237.t1 MTR_8g042410 38.308 201 106 6 11 196 36 233 1.23e-37 142
MS.gene070237.t1 MTR_2g089620 51.613 124 58 2 1 123 1 123 3.26e-37 137
MS.gene070237.t1 MTR_2g011660 54.867 113 49 2 12 123 13 124 6.52e-37 136
MS.gene070237.t1 MTR_1g017000 38.624 189 100 4 1 188 1 174 6.68e-37 134
MS.gene070237.t1 MTR_4g091490 50.000 130 58 3 12 135 13 141 7.42e-37 137
MS.gene070237.t1 MTR_7g110830 43.125 160 84 3 1 154 1 159 1.10e-36 136
MS.gene070237.t1 MTR_3g461490 50.427 117 56 2 12 127 12 127 2.14e-36 134
MS.gene070237.t1 MTR_5g014990 38.117 223 116 8 1 204 1 220 2.14e-36 134
MS.gene070237.t1 MTR_5g029840 52.212 113 52 2 12 123 12 123 5.98e-36 134
MS.gene070237.t1 MTR_2g088170 52.542 118 55 1 12 129 29 145 1.58e-35 135
MS.gene070237.t1 MTR_4g073420 43.226 155 84 4 1 154 1 152 1.78e-35 131
MS.gene070237.t1 MTR_1g100653 46.281 121 64 1 1 121 1 120 3.47e-35 130
MS.gene070237.t1 MTR_1g076150 43.796 137 76 1 12 148 12 147 3.51e-35 129
MS.gene070237.t1 MTR_7g076740 48.000 125 62 3 1 123 1 124 4.15e-35 130
MS.gene070237.t1 MTR_8g017440 44.604 139 74 3 1 137 1 138 6.50e-35 131
MS.gene070237.t1 MTR_3g074520 47.200 125 64 2 1 124 1 124 6.96e-35 131
MS.gene070237.t1 MTR_2g097910 51.724 116 54 2 12 126 20 134 1.25e-34 130
MS.gene070237.t1 MTR_3g097450 48.120 133 66 3 1 132 1 131 1.27e-34 129
MS.gene070237.t1 MTR_5g007370 41.212 165 89 4 1 159 2 164 1.39e-34 129
MS.gene070237.t1 MTR_1g085040 48.387 124 62 2 1 123 1 123 1.73e-34 130
MS.gene070237.t1 MTR_8g095390 50.000 124 60 2 1 123 1 123 2.49e-34 129
MS.gene070237.t1 MTR_4g478180 48.800 125 61 3 12 135 13 135 3.01e-34 129
MS.gene070237.t1 MTR_1g085640 45.833 144 72 3 1 139 1 143 3.22e-34 130
MS.gene070237.t1 MTR_4g065017 47.244 127 65 2 1 126 6 131 5.52e-34 128
MS.gene070237.t1 MTR_1g043080 50.909 110 50 2 12 121 12 117 8.71e-34 126
MS.gene070237.t1 MTR_3g028740 51.304 115 54 2 4 117 14 127 8.88e-34 128
MS.gene070237.t1 MTR_4g082290 44.000 150 80 3 1 149 1 147 9.66e-34 129
MS.gene070237.t1 MTR_4g082230 43.333 150 81 3 1 149 1 147 1.62e-33 129
MS.gene070237.t1 MTR_1g043050 49.123 114 55 2 12 123 12 124 1.80e-33 125
MS.gene070237.t1 MTR_2g064160 47.458 118 60 2 7 123 6 122 2.16e-33 126
MS.gene070237.t1 MTR_7g115650 48.077 104 53 1 12 115 12 114 3.49e-33 123
MS.gene070237.t1 MTR_1g112760 47.154 123 63 2 12 133 13 134 4.14e-33 123
MS.gene070237.t1 MTR_8g031360 49.153 118 57 3 8 123 9 125 4.94e-33 125
MS.gene070237.t1 MTR_7g011170 46.094 128 67 2 1 127 1 127 5.08e-33 125
MS.gene070237.t1 MTR_6g012690 43.357 143 78 3 1 142 1 141 9.64e-33 125
MS.gene070237.t1 MTR_8g017500 45.161 124 66 2 1 123 1 123 1.16e-32 125
MS.gene070237.t1 MTR_0008s0280 46.721 122 64 1 8 129 8 128 1.17e-32 122
MS.gene070237.t1 MTR_4g105130 46.094 128 67 2 1 127 1 127 1.42e-32 125
MS.gene070237.t1 MTR_1g017140 50.862 116 55 2 1 115 1 115 1.59e-32 124
MS.gene070237.t1 MTR_3g077110 47.541 122 62 2 12 132 12 132 1.60e-32 125
MS.gene070237.t1 MTR_0251s0050 40.268 149 77 3 9 157 10 146 1.64e-32 123
MS.gene070237.t1 MTR_5g079670 45.133 113 60 2 12 123 11 122 1.73e-32 121
MS.gene070237.t1 MTR_8g017540 47.826 115 59 1 1 115 47 160 1.94e-32 125
MS.gene070237.t1 MTR_7g111290 51.818 110 52 1 1 110 1 109 2.69e-32 125
MS.gene070237.t1 MTR_5g042030 50.427 117 56 2 12 127 7 122 4.03e-32 122
MS.gene070237.t1 MTR_2g099740 45.968 124 65 2 1 123 1 123 4.97e-32 124
MS.gene070237.t1 MTR_2g095520 51.786 112 52 2 1 111 1 111 5.88e-32 122
MS.gene070237.t1 MTR_7g102110 49.138 116 57 2 1 115 1 115 6.93e-32 121
MS.gene070237.t1 MTR_6g013135 35.252 278 130 12 73 328 126 375 6.93e-32 124
MS.gene070237.t1 MTR_4g485530 46.847 111 57 2 14 123 14 123 7.25e-32 119
MS.gene070237.t1 MTR_4g057635 50.000 116 56 2 1 115 1 115 7.81e-32 122
MS.gene070237.t1 MTR_3g103570 48.276 116 58 2 1 115 1 115 9.73e-32 122
MS.gene070237.t1 MTR_8g098860 45.378 119 64 1 1 119 1 118 2.12e-31 121
MS.gene070237.t1 MTR_5g010020 47.748 111 57 1 1 111 1 110 2.64e-31 121
MS.gene070237.t1 MTR_4g097570 50.450 111 53 2 1 110 1 110 2.67e-31 120
MS.gene070237.t1 MTR_3g065440 46.512 129 67 2 1 128 1 128 2.84e-31 120
MS.gene070237.t1 MTR_5g078140 46.875 128 66 2 1 127 1 127 5.01e-31 120
MS.gene070237.t1 MTR_4g121460 48.077 104 53 1 12 115 12 114 5.97e-31 120
MS.gene070237.t1 MTR_2g089450 45.217 115 62 1 1 115 1 114 6.54e-31 118
MS.gene070237.t1 MTR_6g009430 46.154 117 61 2 12 127 12 127 6.58e-31 120
MS.gene070237.t1 MTR_1g086530 46.789 109 57 1 11 119 32 139 1.11e-30 118
MS.gene070237.t1 MTR_0008s0390 41.727 139 76 3 4 142 6 139 1.16e-30 118
MS.gene070237.t1 MTR_3g083540 45.133 113 60 2 12 123 41 152 1.27e-30 119
MS.gene070237.t1 MTR_1g110460 45.370 108 58 1 12 119 26 132 1.80e-30 118
MS.gene070237.t1 MTR_8g027345 46.296 108 57 1 12 119 12 118 3.17e-30 117
MS.gene070237.t1 MTR_6g090405 45.690 116 61 2 1 115 1 115 3.19e-30 116
MS.gene070237.t1 MTR_0063s0090 47.115 104 54 1 8 111 8 110 3.48e-30 115
MS.gene070237.t1 MTR_7g096930 47.115 104 54 1 12 115 12 114 3.79e-30 117
MS.gene070237.t1 MTR_4g128670 49.107 112 55 2 1 111 1 111 5.11e-30 118
MS.gene070237.t1 MTR_7g035075 46.491 114 57 2 2 115 7 116 6.31e-30 114
MS.gene070237.t1 MTR_8g017390 46.552 116 60 2 1 115 1 115 6.45e-30 120
MS.gene070237.t1 MTR_0008s0470 38.889 144 84 2 12 155 13 152 6.78e-30 116
MS.gene070237.t1 MTR_1g062940 50.000 106 52 1 10 115 4 108 6.95e-30 114
MS.gene070237.t1 MTR_4g097570 50.000 112 53 3 1 110 1 111 8.95e-30 116
MS.gene070237.t1 MTR_7g117730 43.220 118 65 2 1 117 1 117 9.15e-30 115
MS.gene070237.t1 MTR_4g029540 46.099 141 66 5 9 145 7 141 9.32e-30 116
MS.gene070237.t1 MTR_4g100720 45.631 103 55 1 9 111 10 111 9.69e-30 112
MS.gene070237.t1 MTR_8g020490 49.000 100 50 1 12 111 8 106 1.13e-29 115
MS.gene070237.t1 MTR_0140s0030 46.296 108 56 2 12 118 13 119 1.19e-29 117
MS.gene070237.t1 MTR_0489s0020 46.296 108 56 2 12 118 13 119 1.19e-29 117
MS.gene070237.t1 MTR_7g010210 47.222 108 55 2 12 118 12 118 1.21e-29 115
MS.gene070237.t1 MTR_7g010210 47.222 108 55 2 12 118 12 118 1.72e-29 116
MS.gene070237.t1 MTR_6g012180 47.000 100 52 1 12 111 12 110 2.49e-29 115
MS.gene070237.t1 MTR_6g006030 48.077 104 53 1 12 115 14 116 2.71e-29 112
MS.gene070237.t1 MTR_1g073170 49.515 103 51 1 13 115 21 122 3.61e-29 114
MS.gene070237.t1 MTR_5g078910 48.077 104 53 1 12 115 7 109 3.74e-29 114
MS.gene070237.t1 MTR_8g017340 43.382 136 70 4 1 130 1 135 3.86e-29 118
MS.gene070237.t1 MTR_2g067420 49.524 105 52 1 7 111 9 112 8.06e-29 114
MS.gene070237.t1 MTR_2g034790 47.115 104 54 1 12 115 12 114 8.68e-29 114
MS.gene070237.t1 MTR_4g102380 44.800 125 67 2 1 124 1 124 1.04e-28 112
MS.gene070237.t1 MTR_3g039990 46.154 104 55 1 12 115 13 115 1.05e-28 114
MS.gene070237.t1 MTR_6g055910 45.299 117 61 2 7 121 9 124 1.10e-28 113
MS.gene070237.t1 MTR_2g089420 48.077 104 53 1 12 115 11 113 1.12e-28 116
MS.gene070237.t1 MTR_1g100667 49.515 103 51 1 13 115 14 115 1.16e-28 112
MS.gene070237.t1 MTR_8g017350 42.647 136 71 4 1 130 1 135 1.24e-28 117
MS.gene070237.t1 MTR_7g087130 47.222 108 55 2 12 118 12 118 1.35e-28 114
MS.gene070237.t1 MTR_4g125520 44.144 111 61 1 1 111 1 110 4.24e-28 112
MS.gene070237.t1 MTR_1g086510 44.037 109 60 1 4 112 13 120 6.73e-28 110
MS.gene070237.t1 MTR_0247s0040 44.444 108 59 1 7 114 2 108 6.98e-28 108
MS.gene070237.t1 MTR_8g006470 48.148 108 54 2 12 118 10 116 1.11e-27 110
MS.gene070237.t1 MTR_1g045610 43.860 114 60 2 11 124 20 129 1.13e-27 109
MS.gene070237.t1 MTR_5g079120 44.444 108 59 1 8 115 57 163 1.21e-27 110
MS.gene070237.t1 MTR_5g079290 45.192 104 56 1 12 115 17 119 2.01e-27 109
MS.gene070237.t1 MTR_8g060940 45.192 104 56 1 8 111 3 105 2.21e-27 108
MS.gene070237.t1 MTR_7g109320 52.000 100 47 1 12 111 12 110 2.27e-27 111
MS.gene070237.t1 MTR_0193s0090 44.037 109 60 1 7 115 2 109 4.33e-27 106
MS.gene070237.t1 MTR_5g078950 43.925 107 59 1 8 114 3 108 8.56e-27 107
MS.gene070237.t1 MTR_5g079220 45.192 104 56 1 12 115 21 123 9.39e-27 107
MS.gene070237.t1 MTR_0197s0010 46.316 95 50 1 17 111 6 99 4.09e-26 104
MS.gene070237.t1 MTR_5g078930 40.984 122 68 2 8 129 5 122 4.84e-26 104
MS.gene070237.t1 MTR_2g033170 47.115 104 54 1 12 115 24 126 8.15e-26 106
MS.gene070237.t1 MTR_5g078860 45.192 104 56 1 12 115 7 109 9.62e-26 105
MS.gene070237.t1 MTR_0001s0360 29.717 212 133 3 12 218 7 207 1.32e-25 103
MS.gene070237.t1 MTR_4g063100 42.857 105 59 1 11 115 6 109 2.60e-25 103
MS.gene070237.t1 MTR_4g123040 43.966 116 64 1 4 119 16 130 2.75e-25 104
MS.gene070237.t1 MTR_4g019370 48.624 109 49 4 14 121 38 140 4.58e-25 104
MS.gene070237.t1 MTR_5g078800 44.231 104 57 1 12 115 7 109 4.83e-25 102
MS.gene070237.t1 MTR_7g017260 45.098 102 53 2 12 111 25 125 5.00e-25 103
MS.gene070237.t1 MTR_3g077650 46.491 114 57 3 14 125 181 292 5.64e-25 105
MS.gene070237.t1 MTR_5g016510 49.057 106 49 3 14 119 5 105 1.30e-24 102
MS.gene070237.t1 MTR_3g101290 47.664 107 51 3 14 120 37 138 2.31e-24 100
MS.gene070237.t1 MTR_2g096380 41.964 112 61 2 12 120 6 116 3.48e-24 99.8
MS.gene070237.t1 MTR_4g105660 43.333 120 62 4 9 125 175 291 3.73e-24 103
MS.gene070237.t1 MTR_3g463400 43.519 108 59 2 12 119 131 236 1.03e-23 102
MS.gene070237.t1 MTR_5g049190 45.370 108 57 2 8 115 13 118 1.39e-23 98.2
MS.gene070237.t1 MTR_4g094982 49.057 106 49 3 14 119 5 105 5.76e-23 97.4
MS.gene070237.t1 MTR_6g027340 38.843 121 72 2 14 134 16 134 6.62e-23 95.5
MS.gene070237.t1 MTR_7g035350 48.000 100 50 2 17 116 228 325 1.24e-22 99.0
MS.gene070237.t1 MTR_6g015455 45.378 119 58 4 14 131 5 117 1.48e-22 100
MS.gene070237.t1 MTR_5g007300 47.674 86 45 0 1 86 53 138 1.91e-22 92.4
MS.gene070237.t1 MTR_5g070020 42.202 109 61 2 11 119 119 225 2.33e-22 97.1
MS.gene070237.t1 MTR_6g074860 38.889 108 64 2 11 118 1 106 2.34e-22 94.7
MS.gene070237.t1 MTR_6g027360 38.211 123 74 2 12 134 76 196 4.32e-22 95.5
MS.gene070237.t1 MTR_5g010650 45.192 104 54 3 7 110 104 204 1.15e-21 96.3
MS.gene070237.t1 MTR_3g045430 36.719 128 79 2 1 127 2 128 1.19e-21 94.0
MS.gene070237.t1 MTR_7g451170 45.217 115 53 4 14 122 191 301 1.47e-21 95.5
MS.gene070237.t1 MTR_5g082910 46.939 98 50 2 14 111 19 114 1.75e-21 93.6
MS.gene070237.t1 MTR_7g037260 40.566 106 61 2 14 119 145 248 3.42e-21 94.0
MS.gene070237.t1 MTR_7g111290 55.224 67 29 1 44 110 2 67 5.00e-21 93.2
MS.gene070237.t1 MTR_1g026870 41.346 104 59 2 12 115 83 184 3.08e-20 92.8
MS.gene070237.t1 MTR_1g026870 35.052 97 62 1 14 110 33 128 1.23e-13 72.8
MS.gene070237.t1 MTR_3g110028 41.346 104 59 2 12 115 83 184 3.18e-20 92.8
MS.gene070237.t1 MTR_3g110028 35.052 97 62 1 14 110 33 128 1.16e-13 72.8
MS.gene070237.t1 MTR_7g061330 35.762 151 85 5 12 154 111 257 6.93e-20 91.3
MS.gene070237.t1 MTR_7g061330 32.990 97 64 1 14 110 61 156 1.02e-11 66.6
MS.gene070237.t1 MTR_7g461410 35.762 151 85 5 12 154 111 257 6.93e-20 91.3
MS.gene070237.t1 MTR_7g461410 32.990 97 64 1 14 110 61 156 1.02e-11 66.6
MS.gene070237.t1 MTR_7g037130 40.566 106 61 2 14 119 145 248 7.46e-20 90.1
MS.gene070237.t1 MTR_7g450950 40.566 106 61 2 14 119 157 260 8.59e-20 89.7
MS.gene070237.t1 MTR_1g057980 39.640 111 65 2 12 122 78 186 8.89e-20 89.0
MS.gene070237.t1 MTR_7g061330 35.762 151 85 5 12 154 75 221 9.20e-20 90.9
MS.gene070237.t1 MTR_7g061330 32.990 97 64 1 14 110 25 120 1.09e-11 66.2
MS.gene070237.t1 MTR_3g089045 40.171 117 65 3 2 115 4 118 1.43e-19 88.2
MS.gene070237.t1 MTR_4g088015 40.385 104 60 2 12 115 219 320 1.94e-19 89.7
MS.gene070237.t1 MTR_4g082040 40.741 108 59 3 11 115 102 207 2.08e-19 89.4
MS.gene070237.t1 MTR_6g055910 46.835 79 39 2 45 121 18 95 3.28e-19 86.3
MS.gene070237.t1 MTR_5g041570 35.664 143 81 5 14 147 134 274 5.05e-19 88.2
MS.gene070237.t1 MTR_7g061550 41.121 107 60 2 14 118 7 112 9.30e-19 87.0
MS.gene070237.t1 MTR_6g027370 36.923 130 80 2 8 137 93 220 1.98e-18 85.9
MS.gene070237.t1 MTR_0023s0210 50.000 70 35 0 12 81 7 76 3.87e-18 78.6
MS.gene070237.t1 MTR_7g086960 42.574 101 56 2 11 111 86 184 4.94e-18 84.7
MS.gene070237.t1 MTR_4g063100 48.611 72 36 1 44 115 10 80 1.17e-17 81.3
MS.gene070237.t1 MTR_2g096380 46.250 80 39 2 44 120 19 97 5.01e-17 79.3
MS.gene070237.t1 MTR_5g038910 34.579 107 67 3 17 122 29 133 3.38e-13 70.9
MS.gene070237.t1 MTR_5g038910 34.579 107 67 3 17 122 29 133 4.42e-13 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene070237.t1 AT2G26960 47.059 170 75 5 2 159 8 174 2.75e-43 155
MS.gene070237.t1 AT5G55020 53.043 115 53 1 11 125 25 138 1.02e-38 145
MS.gene070237.t1 AT2G32460 50.000 118 58 1 12 129 18 134 4.03e-38 142
MS.gene070237.t1 AT2G32460 50.000 118 58 1 12 129 6 122 4.09e-38 142
MS.gene070237.t1 AT4G21440 52.419 124 57 2 1 123 1 123 4.11e-38 140
MS.gene070237.t1 AT4G26930 48.361 122 62 1 11 132 18 138 7.94e-38 140
MS.gene070237.t1 AT3G11440 48.387 124 63 1 9 132 38 160 1.51e-37 140
MS.gene070237.t1 AT5G56110 51.282 117 55 2 12 127 12 127 3.50e-37 137
MS.gene070237.t1 AT5G06100 50.420 119 58 1 12 130 32 149 3.82e-37 139
MS.gene070237.t1 AT3G11440 48.387 124 63 1 9 132 38 160 3.96e-37 141
MS.gene070237.t1 AT3G11440 48.387 124 63 1 9 132 38 160 3.96e-37 141
MS.gene070237.t1 AT3G11440 48.387 124 63 1 9 132 38 160 3.96e-37 141
MS.gene070237.t1 AT5G06100 50.420 119 58 1 12 130 32 149 9.02e-37 139
MS.gene070237.t1 AT5G06100 50.420 119 58 1 12 130 32 149 9.02e-37 139
MS.gene070237.t1 AT5G06100 50.420 119 58 1 12 130 32 149 9.02e-37 139
MS.gene070237.t1 AT5G06100 50.420 119 58 1 12 130 32 149 9.02e-37 139
MS.gene070237.t1 AT5G26660 48.148 135 68 2 1 134 1 134 9.11e-37 136
MS.gene070237.t1 AT1G22640 43.590 156 85 3 1 155 1 154 9.39e-37 134
MS.gene070237.t1 AT4G38620 40.351 171 99 3 1 170 1 169 1.11e-36 134
MS.gene070237.t1 AT2G26950 50.000 120 59 1 9 128 13 131 1.34e-36 136
MS.gene070237.t1 AT4G01680 48.062 129 65 2 1 128 1 128 3.49e-36 132
MS.gene070237.t1 AT1G57560 37.069 232 123 7 1 222 1 219 3.88e-36 134
MS.gene070237.t1 AT4G28110 50.806 124 59 2 1 123 1 123 5.58e-36 132
MS.gene070237.t1 AT5G10280 38.389 211 101 6 12 199 12 216 7.71e-36 133
MS.gene070237.t1 AT5G54230 52.212 113 52 2 12 123 12 123 8.49e-36 133
MS.gene070237.t1 AT1G35515 47.581 124 63 2 1 123 1 123 2.04e-35 129
MS.gene070237.t1 AT3G61250 47.581 124 63 2 1 123 1 123 2.31e-35 131
MS.gene070237.t1 AT4G01680 48.062 129 65 2 1 128 1 128 2.61e-35 132
MS.gene070237.t1 AT1G74080 39.175 194 108 6 12 198 12 202 3.75e-35 131
MS.gene070237.t1 AT1G57560 49.219 128 63 2 1 127 1 127 4.99e-35 130
MS.gene070237.t1 AT4G05100 52.586 116 53 2 9 123 10 124 5.39e-35 131
MS.gene070237.t1 AT4G34990 39.326 178 98 3 1 177 1 169 8.20e-35 129
MS.gene070237.t1 AT5G16770 46.400 125 65 2 1 124 1 124 9.71e-35 130
MS.gene070237.t1 AT5G16770 46.400 125 65 2 1 124 1 124 9.71e-35 130
MS.gene070237.t1 AT2G16720 48.387 124 62 2 1 123 1 123 1.18e-34 129
MS.gene070237.t1 AT5G16770 46.400 125 65 2 1 124 1 124 1.59e-34 130
MS.gene070237.t1 AT5G16770 46.400 125 65 2 1 124 1 124 1.59e-34 130
MS.gene070237.t1 AT5G65230 46.617 133 69 2 1 132 1 132 1.67e-34 129
MS.gene070237.t1 AT4G09460 42.759 145 76 3 1 144 1 139 2.00e-34 127
MS.gene070237.t1 AT4G17785 46.970 132 67 3 2 132 4 133 3.15e-34 130
MS.gene070237.t1 AT4G17785 46.970 132 67 3 2 132 4 133 3.27e-34 129
MS.gene070237.t1 AT1G09540 50.000 124 60 2 1 123 1 123 4.02e-34 129
MS.gene070237.t1 AT3G08500 49.573 117 57 2 2 117 20 135 4.30e-34 129
MS.gene070237.t1 AT3G01140 46.094 128 67 2 1 127 1 127 4.34e-34 129
MS.gene070237.t1 AT3G12720 50.442 113 54 2 12 123 22 133 7.94e-34 127
MS.gene070237.t1 AT5G15310 46.094 128 67 2 1 127 1 127 1.11e-33 125
MS.gene070237.t1 AT3G01140 46.094 128 67 2 1 127 44 170 1.48e-33 128
MS.gene070237.t1 AT3G02940 45.600 125 66 2 1 124 1 124 1.78e-33 126
MS.gene070237.t1 AT1G18570 47.863 117 59 2 12 127 13 128 2.43e-33 127
MS.gene070237.t1 AT5G15310 46.094 128 67 2 1 127 1 127 2.61e-33 126
MS.gene070237.t1 AT5G15310 46.094 128 67 2 1 127 1 127 2.81e-33 126
MS.gene070237.t1 AT3G02940 45.600 125 66 2 1 124 1 124 2.96e-33 126
MS.gene070237.t1 AT3G02940 45.600 125 66 2 1 124 1 124 2.96e-33 126
MS.gene070237.t1 AT4G37780 45.455 132 69 3 1 130 1 131 6.14e-33 125
MS.gene070237.t1 AT5G52600 39.024 164 88 4 1 153 1 163 7.20e-33 122
MS.gene070237.t1 AT5G12870 51.852 108 50 2 12 118 18 124 1.06e-32 124
MS.gene070237.t1 AT1G34670 47.581 124 63 2 1 123 1 123 1.28e-32 125
MS.gene070237.t1 AT3G13890 46.957 115 60 1 1 115 1 114 1.92e-32 125
MS.gene070237.t1 AT1G56160 49.573 117 54 3 7 123 9 120 2.08e-32 123
MS.gene070237.t1 AT5G14750 46.847 111 58 1 1 111 5 114 2.83e-32 120
MS.gene070237.t1 AT5G23000 50.862 116 55 2 1 115 1 115 2.98e-32 124
MS.gene070237.t1 AT1G16490 38.974 195 91 7 7 181 9 195 4.17e-32 122
MS.gene070237.t1 AT5G60890 47.009 117 60 2 12 127 12 127 4.75e-32 122
MS.gene070237.t1 AT4G01680 43.972 141 65 3 1 128 1 140 5.40e-32 123
MS.gene070237.t1 AT1G18710 43.860 114 62 2 12 124 12 124 6.02e-32 121
MS.gene070237.t1 AT3G23250 47.115 104 54 1 12 115 12 114 8.47e-32 121
MS.gene070237.t1 AT1G74430 42.982 114 63 2 12 124 12 124 1.07e-31 120
MS.gene070237.t1 AT2G36890 46.032 126 66 2 1 125 1 125 1.07e-31 121
MS.gene070237.t1 AT3G49690 50.000 116 56 2 1 115 1 115 1.50e-31 121
MS.gene070237.t1 AT2G36890 46.032 126 66 2 1 125 42 166 1.91e-31 122
MS.gene070237.t1 AT3G13540 44.248 113 61 2 12 123 23 134 2.16e-31 119
MS.gene070237.t1 AT1G63910 47.059 119 62 1 1 119 1 118 2.48e-31 122
MS.gene070237.t1 AT5G07690 47.863 117 59 2 12 127 12 127 2.51e-31 121
MS.gene070237.t1 AT5G61420 47.009 117 60 2 12 127 12 127 2.57e-31 122
MS.gene070237.t1 AT5G40350 34.756 164 105 2 12 174 17 179 2.65e-31 118
MS.gene070237.t1 AT1G79180 40.667 150 85 3 7 153 9 157 2.74e-31 120
MS.gene070237.t1 AT5G65790 50.000 116 56 2 1 115 1 115 4.49e-31 121
MS.gene070237.t1 AT3G12820 47.368 114 57 2 7 118 9 121 7.34e-31 117
MS.gene070237.t1 AT1G06180 49.038 104 52 1 12 115 12 114 8.16e-31 117
MS.gene070237.t1 AT5G07700 47.009 117 60 2 12 127 12 127 9.42e-31 120
MS.gene070237.t1 AT5G07700 47.009 117 60 2 12 127 12 127 9.42e-31 120
MS.gene070237.t1 AT5G57620 49.587 121 58 3 1 119 1 120 9.81e-31 119
MS.gene070237.t1 AT3G27920 49.515 103 51 1 13 115 15 116 1.12e-30 117
MS.gene070237.t1 AT3G01530 46.552 116 60 2 3 117 16 130 1.92e-30 115
MS.gene070237.t1 AT3G28910 46.903 113 58 2 7 118 7 118 2.30e-30 118
MS.gene070237.t1 AT5G16600 47.863 117 59 2 12 127 12 127 3.27e-30 118
MS.gene070237.t1 AT1G66230 44.531 128 69 2 1 127 1 127 4.41e-30 117
MS.gene070237.t1 AT2G31180 41.667 120 69 1 12 131 12 130 5.08e-30 115
MS.gene070237.t1 AT3G27810 48.077 104 53 1 12 115 20 122 5.12e-30 115
MS.gene070237.t1 AT5G14340 45.299 117 62 2 12 127 24 139 6.41e-30 116
MS.gene070237.t1 AT2G47190 47.115 104 54 1 12 115 20 122 6.80e-30 116
MS.gene070237.t1 AT5G62320 50.000 120 51 3 12 123 13 131 7.52e-30 115
MS.gene070237.t1 AT5G40330 42.609 115 65 1 1 115 1 114 9.77e-30 114
MS.gene070237.t1 AT1G08810 47.222 108 55 2 12 118 12 118 1.35e-29 115
MS.gene070237.t1 AT3G13890 43.548 124 60 2 1 115 1 123 1.56e-29 117
MS.gene070237.t1 AT1G74650 46.154 104 55 1 12 115 12 114 1.58e-29 116
MS.gene070237.t1 AT3G47600 47.222 108 55 2 12 118 12 118 1.79e-29 116
MS.gene070237.t1 AT3G28470 48.571 105 53 1 7 111 7 110 2.33e-29 115
MS.gene070237.t1 AT4G22680 42.581 155 85 4 12 165 12 163 2.59e-29 114
MS.gene070237.t1 AT1G48000 41.176 136 64 2 12 147 32 151 3.04e-29 113
MS.gene070237.t1 AT5G62470 42.857 133 70 3 12 143 12 139 3.80e-29 115
MS.gene070237.t1 AT1G68320 44.444 108 59 1 12 119 19 125 6.69e-29 114
MS.gene070237.t1 AT5G35550 40.288 139 80 2 12 148 14 151 1.49e-28 112
MS.gene070237.t1 AT3G62610 47.170 106 54 2 12 116 12 116 2.08e-28 114
MS.gene070237.t1 AT5G49330 46.000 100 53 1 12 111 12 110 2.47e-28 113
MS.gene070237.t1 AT3G60460 45.614 114 60 2 6 118 5 117 4.04e-28 112
MS.gene070237.t1 AT2G47460 47.170 106 54 2 12 116 12 116 4.28e-28 113
MS.gene070237.t1 AT3G24310 48.544 103 52 1 13 115 19 120 5.36e-28 110
MS.gene070237.t1 AT3G53200 49.038 104 52 1 12 115 9 111 6.14e-28 110
MS.gene070237.t1 AT5G62470 42.857 133 69 4 12 143 12 138 7.03e-28 112
MS.gene070237.t1 AT1G25340 43.925 107 59 1 13 119 19 124 8.96e-28 110
MS.gene070237.t1 AT4G12350 32.000 225 121 6 1 194 1 224 1.25e-27 110
MS.gene070237.t1 AT3G30210 45.192 104 56 1 12 115 27 129 2.56e-27 109
MS.gene070237.t1 AT4G13480 46.667 105 55 1 11 115 5 108 5.15e-27 108
MS.gene070237.t1 AT4G18770 44.275 131 69 3 6 134 209 337 9.28e-27 110
MS.gene070237.t1 AT3G48920 47.573 103 53 1 13 115 19 120 1.13e-26 107
MS.gene070237.t1 AT1G56650 39.552 134 71 2 12 136 8 140 1.52e-26 106
MS.gene070237.t1 AT1G79180 33.880 183 84 4 7 153 9 190 6.90e-26 106
MS.gene070237.t1 AT5G26660 50.549 91 43 2 45 134 14 103 9.73e-26 105
MS.gene070237.t1 AT5G59780 43.860 114 60 2 13 123 9 121 1.35e-25 103
MS.gene070237.t1 AT3G06490 49.038 104 52 1 12 115 19 121 1.39e-25 105
MS.gene070237.t1 AT5G52260 44.361 133 69 3 1 132 1 129 1.48e-25 104
MS.gene070237.t1 AT1G66380 46.000 100 53 1 12 111 8 106 1.83e-25 100
MS.gene070237.t1 AT1G66370 44.000 100 55 1 12 111 8 106 2.19e-25 103
MS.gene070237.t1 AT3G46130 42.982 114 61 2 13 123 10 122 3.97e-25 102
MS.gene070237.t1 AT4G25560 45.946 111 57 2 13 121 11 120 5.29e-25 103
MS.gene070237.t1 AT5G40360 44.444 108 58 2 9 116 153 258 7.48e-25 104
MS.gene070237.t1 AT3G27785 42.478 113 63 2 7 119 182 292 1.56e-24 104
MS.gene070237.t1 AT1G66390 44.231 104 57 1 12 115 8 110 3.23e-24 100
MS.gene070237.t1 AT5G49620 46.154 104 55 1 12 115 26 128 3.27e-24 101
MS.gene070237.t1 AT3G50060 49.057 106 49 3 14 119 6 106 4.15e-24 101
MS.gene070237.t1 AT1G25340 41.121 107 57 2 13 119 19 119 1.01e-23 99.8
MS.gene070237.t1 AT1G25340 41.121 107 57 2 13 119 19 119 1.29e-23 99.8
MS.gene070237.t1 AT4G37260 47.273 110 55 3 14 122 13 120 6.84e-23 98.2
MS.gene070237.t1 AT5G67300 48.113 106 50 3 14 119 6 106 8.92e-23 97.4
MS.gene070237.t1 AT5G49620 41.880 117 55 1 12 115 26 142 1.15e-22 97.4
MS.gene070237.t1 AT5G58850 46.154 104 54 2 12 115 103 204 2.09e-22 98.2
MS.gene070237.t1 AT2G23290 47.170 106 51 3 14 119 13 113 2.74e-22 96.3
MS.gene070237.t1 AT2G39880 46.957 115 57 3 3 115 37 149 3.99e-22 96.7
MS.gene070237.t1 AT4G33450 38.843 121 72 2 2 122 7 125 4.19e-22 94.4
MS.gene070237.t1 AT1G17950 40.336 119 62 4 11 122 2 118 1.10e-21 93.2
MS.gene070237.t1 AT5G40350 33.835 133 86 2 43 174 3 134 1.48e-21 90.9
MS.gene070237.t1 AT3G55730 47.573 103 50 3 14 115 56 155 2.27e-21 94.7
MS.gene070237.t1 AT3G09230 45.098 102 54 2 14 115 55 154 2.74e-21 94.7
MS.gene070237.t1 AT5G17800 38.760 129 73 3 1 125 80 206 3.33e-21 93.6
MS.gene070237.t1 AT3G53200 56.338 71 30 1 45 115 9 78 5.68e-21 90.1
MS.gene070237.t1 AT4G32730 44.231 104 56 2 12 115 85 186 5.69e-21 95.1
MS.gene070237.t1 AT4G32730 34.021 97 63 1 14 110 35 130 8.23e-13 70.5
MS.gene070237.t1 AT4G32730 44.231 104 56 2 12 115 85 186 5.69e-21 95.1
MS.gene070237.t1 AT4G32730 34.021 97 63 1 14 110 35 130 8.23e-13 70.5
MS.gene070237.t1 AT4G32730 44.231 104 56 2 12 115 85 186 5.69e-21 95.1
MS.gene070237.t1 AT4G32730 34.021 97 63 1 14 110 35 130 8.23e-13 70.5
MS.gene070237.t1 AT4G32730 44.231 104 56 2 12 115 85 186 5.69e-21 95.1
MS.gene070237.t1 AT4G32730 34.021 97 63 1 14 110 35 130 8.23e-13 70.5
MS.gene070237.t1 AT4G32730 44.231 104 56 2 12 115 85 186 5.87e-21 95.1
MS.gene070237.t1 AT4G32730 34.021 97 63 1 14 110 35 130 7.95e-13 70.1
MS.gene070237.t1 AT5G11510 42.308 104 58 2 12 115 79 180 6.28e-21 95.1
MS.gene070237.t1 AT5G11510 32.990 97 64 1 14 110 29 124 3.26e-12 68.6
MS.gene070237.t1 AT5G11510 42.308 104 58 2 12 115 79 180 6.28e-21 95.1
MS.gene070237.t1 AT5G11510 32.990 97 64 1 14 110 29 124 3.26e-12 68.6
MS.gene070237.t1 AT5G11510 42.308 104 58 2 12 115 79 180 6.28e-21 95.1
MS.gene070237.t1 AT5G11510 32.990 97 64 1 14 110 29 124 3.26e-12 68.6
MS.gene070237.t1 AT5G11510 42.308 104 58 2 12 115 79 180 7.85e-21 94.7
MS.gene070237.t1 AT5G11510 32.990 97 64 1 14 110 29 124 3.86e-12 68.2
MS.gene070237.t1 AT5G11510 42.308 104 58 2 12 115 79 180 8.55e-21 94.4
MS.gene070237.t1 AT5G11510 32.990 97 64 1 14 110 29 124 4.28e-12 68.2
MS.gene070237.t1 AT5G11050 44.118 102 55 2 14 115 105 204 1.04e-20 93.2
MS.gene070237.t1 AT1G69560 39.474 114 64 3 3 113 112 223 2.05e-20 91.7
MS.gene070237.t1 AT1G69560 39.474 114 64 3 3 113 96 207 2.08e-20 91.3
MS.gene070237.t1 AT2G25230 39.370 127 72 4 1 125 13 136 2.16e-20 89.4
MS.gene070237.t1 AT3G09370 36.957 138 79 3 12 143 133 268 5.79e-20 91.7
MS.gene070237.t1 AT3G09370 34.021 97 63 1 14 110 83 178 7.23e-13 70.1
MS.gene070237.t1 AT3G09370 36.957 138 79 3 12 143 128 263 6.37e-20 91.3
MS.gene070237.t1 AT3G09370 34.021 97 63 1 14 110 78 173 8.82e-13 69.7
MS.gene070237.t1 AT3G09370 36.957 138 79 3 12 143 141 276 7.83e-20 91.3
MS.gene070237.t1 AT3G09370 34.021 97 63 1 14 110 91 186 9.77e-13 69.7
MS.gene070237.t1 AT3G27810 49.333 75 37 1 45 119 4 77 1.01e-19 85.9
MS.gene070237.t1 AT1G26780 40.594 101 58 2 11 111 95 193 1.61e-19 87.8
MS.gene070237.t1 AT1G26780 40.741 108 59 3 11 115 95 200 2.06e-19 89.0
MS.gene070237.t1 AT5G35550 41.441 111 62 2 45 153 50 159 2.74e-19 87.0
MS.gene070237.t1 AT1G73410 39.474 114 65 3 11 123 3 113 3.06e-19 86.3
MS.gene070237.t1 AT5G02320 41.121 107 60 3 12 117 125 229 3.69e-19 89.4
MS.gene070237.t1 AT5G02320 35.052 97 62 1 14 110 75 170 5.19e-13 70.5
MS.gene070237.t1 AT5G02320 41.121 107 60 3 12 117 125 229 3.69e-19 89.4
MS.gene070237.t1 AT5G02320 35.052 97 62 1 14 110 75 170 5.19e-13 70.5
MS.gene070237.t1 AT1G73410 39.474 114 65 3 11 123 3 113 3.89e-19 85.1
MS.gene070237.t1 AT5G02320 40.385 104 60 2 12 115 65 166 4.45e-19 89.0
MS.gene070237.t1 AT5G02320 35.052 97 62 1 14 110 15 110 5.60e-13 70.5
MS.gene070237.t1 AT3G12820 51.351 74 33 2 47 118 1 73 5.36e-19 84.3
MS.gene070237.t1 AT5G14750 47.826 69 35 1 47 115 17 84 6.54e-19 83.6
MS.gene070237.t1 AT3G47600 49.333 75 36 2 45 118 39 112 7.50e-18 84.0
MS.gene070237.t1 AT3G46130 46.429 84 41 2 43 123 8 90 1.57e-17 81.3
MS.gene070237.t1 AT2G37630 42.056 107 59 2 14 118 4 109 1.91e-17 83.2
MS.gene070237.t1 AT5G59780 47.561 82 39 2 45 123 20 100 3.12e-17 80.1
MS.gene070237.t1 AT4G00540 40.000 120 63 5 12 128 101 214 3.15e-17 82.8
MS.gene070237.t1 AT3G29020 34.746 118 75 2 11 128 62 177 4.09e-17 80.1
MS.gene070237.t1 AT3G46130 47.561 82 39 2 45 123 20 100 4.57e-17 80.1
MS.gene070237.t1 AT3G29020 37.168 113 68 3 11 122 64 174 4.65e-17 81.3
MS.gene070237.t1 AT1G66380 50.794 63 31 0 12 74 8 70 4.94e-17 76.6
MS.gene070237.t1 AT4G00540 40.000 120 63 5 12 128 99 212 5.01e-17 82.4
MS.gene070237.t1 AT5G40430 36.667 120 71 4 2 120 42 157 8.99e-17 79.7
MS.gene070237.t1 AT1G66380 48.529 68 34 1 44 111 7 73 1.35e-15 72.4
MS.gene070237.t1 AT1G22640 50.000 66 31 2 59 123 2 66 2.08e-14 71.6
MS.gene070237.t1 AT2G02820 33.645 107 68 3 17 122 33 137 2.77e-13 71.2
MS.gene070237.t1 AT2G02820 33.645 107 68 3 17 122 33 137 2.80e-13 71.2
MS.gene070237.t1 AT1G14350 33.645 107 68 3 17 122 28 132 4.98e-13 70.5
MS.gene070237.t1 AT1G14350 33.645 107 68 3 17 122 28 132 4.98e-13 70.5
MS.gene070237.t1 AT2G02820 33.645 107 68 3 17 122 33 137 6.62e-13 69.3
MS.gene070237.t1 AT3G18100 38.144 97 58 2 13 109 497 591 1.80e-12 69.3
MS.gene070237.t1 AT3G18100 38.144 97 58 2 13 109 545 639 1.89e-12 69.3
MS.gene070237.t1 AT3G18100 38.144 97 58 2 13 109 384 478 2.19e-12 68.9
MS.gene070237.t1 AT5G39700 34.286 105 67 2 15 119 57 159 2.23e-12 65.9
MS.gene070237.t1 AT3G18100 38.144 97 58 2 13 109 332 426 2.65e-12 68.6
MS.gene070237.t1 AT1G71030 36.250 80 49 2 51 129 5 83 4.34e-11 61.6
MS.gene070237.t1 AT1G71030 36.250 80 49 2 51 129 19 97 6.40e-11 61.6

Find 80 sgRNAs with CRISPR-Local

Find 111 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATACCTCGTTCCAATTTC+TGG 0.105695 8.2:+6184784 None:intergenic
ATAAATTTGGTTGATGAAAA+AGG 0.165254 8.2:-6183452 MS.gene070237:CDS
AATATACCACAAGTGAAATT+TGG 0.178507 8.2:-6183962 MS.gene070237:CDS
ATACTACTTCAATGATTTAT+AGG 0.202569 8.2:-6183832 MS.gene070237:intron
ACAAATTTGGTTGATGAAAA+AGG 0.207164 8.2:-6183320 MS.gene070237:CDS
GCATTCCTCTGAGATAAATT+TGG 0.210289 8.2:-6183465 MS.gene070237:CDS
AGGAAAGAAGCCAATTTCTT+TGG 0.257544 8.2:-6183300 MS.gene070237:CDS
AGCAAGCCATGGTGACTTTA+TGG 0.262915 8.2:-6183396 MS.gene070237:CDS
ACATTGTCCTCCAAAGAAAT+TGG 0.263509 8.2:+6183290 None:intergenic
AGTGGAAGGTATGAACATTC+TGG 0.308537 8.2:+6183647 None:intergenic
TTCCTTCACGTATGATGCTT+GGG 0.310626 8.2:-6183622 MS.gene070237:CDS
ACATTATTGTAGAGCATGTT+TGG 0.311255 8.2:+6183878 None:intergenic
AAAATTCTTGATGTCATTAT+CGG 0.314551 8.2:+6184117 None:intergenic
CTTGTGAATCCTTAACTTGT+TGG 0.323790 8.2:+6183996 None:intergenic
TTTCAGTTCTTTAACATGTT+TGG 0.331177 8.2:-6184650 MS.gene070237:CDS
TTCAAATAGCCAACAAGTTA+AGG 0.336113 8.2:-6184005 MS.gene070237:CDS
TGTTATATAGACAAGAGAAT+TGG 0.344046 8.2:-6183511 MS.gene070237:CDS
GCATTCGTCTGAGACAAATT+TGG 0.360277 8.2:-6183333 MS.gene070237:CDS
TCATTCAGTTCCATCTTGTC+AGG 0.372533 8.2:+6184046 None:intergenic
ATGTCATTATCGGATCTTCC+AGG 0.377868 8.2:+6184127 None:intergenic
AGGGAAGAAGTCAATTGCTT+TGG 0.381080 8.2:-6183432 MS.gene070237:CDS
AGCAAACCTTGGTGACTTCA+TGG 0.389894 8.2:-6183264 MS.gene070237:CDS
CCATGGTGACTTTATGGATC+TGG 0.413335 8.2:-6183390 MS.gene070237:CDS
CATTATTGTAGAGCATGTTT+GGG 0.426415 8.2:+6183879 None:intergenic
GTTAAAGAACTGAAAGACTT+TGG 0.428943 8.2:+6184658 None:intergenic
ACATGTTTGGTGAATTCAAA+TGG 0.437146 8.2:-6184637 MS.gene070237:CDS
ACTTTATGGATCTGGATCTT+CGG 0.437208 8.2:-6183382 MS.gene070237:CDS
AAAGGACCCTTCTTCACATC+TGG 0.443578 8.2:+6184698 None:intergenic
CCTTCTTCACATCTGGTTGA+AGG 0.447401 8.2:+6184705 None:intergenic
TGAGTATAAAAGTGTCTCAT+TGG 0.449762 8.2:-6183540 MS.gene070237:CDS
GTGGAAGGTATGAACATTCT+GGG 0.450013 8.2:+6183648 None:intergenic
GTTATATAGACAAGAGAATT+GGG 0.451821 8.2:-6183510 MS.gene070237:CDS
AAAGAAGCCAATTTCTTTGG+AGG 0.456698 8.2:-6183297 MS.gene070237:CDS
CTTCCTTCACGTATGATGCT+TGG 0.466091 8.2:-6183623 MS.gene070237:CDS
TCCTCAAATTCCATCACCTA+TGG 0.476014 8.2:-6183594 MS.gene070237:CDS
GTCACCCTTCCCTGACAAGA+TGG 0.495250 8.2:-6184056 MS.gene070237:CDS
TGAAATGTTAAAAGCATATG+TGG 0.496688 8.2:-6184819 MS.gene070237:CDS
GTAAAAGTTGTCGTCTAAGA+TGG 0.497716 8.2:-6184736 MS.gene070237:CDS
TCCATAGGTGATGGAATTTG+AGG 0.498039 8.2:+6183593 None:intergenic
TTCTCGTATACCTATGGCTA+TGG 0.500266 8.2:-6183690 MS.gene070237:CDS
CCTTCAACCAGATGTGAAGA+AGG 0.500980 8.2:-6184705 MS.gene070237:CDS
TCGAACTTCTCGTATACCTA+TGG 0.508189 8.2:-6183696 MS.gene070237:CDS
GAGACTCGATATCAGATGTC+AGG 0.509413 8.2:-6183572 MS.gene070237:CDS
AACGAGGTATCAAGAAATGC+GGG 0.517508 8.2:-6184773 MS.gene070237:CDS
CAGTTCCATCTTGTCAGGGA+AGG 0.522410 8.2:+6184051 None:intergenic
ATTTCTTTGGAGGACAATGT+TGG 0.528188 8.2:-6183287 MS.gene070237:CDS
AAACATGCTCTACAATAATG+TGG 0.540325 8.2:-6183876 MS.gene070237:CDS
TGAATTCAAATGGTCTAAGC+TGG 0.550324 8.2:-6184627 MS.gene070237:CDS
AGGAAAATGGTCAAAAGAAG+AGG 0.551314 8.2:-6184843 MS.gene070237:CDS
CATCACAATGTCTTCATCAT+CGG 0.552237 8.2:-6184891 None:intergenic
GACAATGTTGGAGCAAACCT+TGG 0.566305 8.2:-6183275 MS.gene070237:CDS
ATCAACCAAATTTATCTCAG+AGG 0.568116 8.2:+6183460 None:intergenic
TATCGAGTCTCCATAGGTGA+TGG 0.568247 8.2:+6183584 None:intergenic
AGTTCCATCTTGTCAGGGAA+GGG 0.568728 8.2:+6184052 None:intergenic
AACGATGTTGCAGCAAGCCA+TGG 0.571591 8.2:-6183407 MS.gene070237:CDS
CATCATCGGATACTAACAAA+GGG 0.573807 8.2:-6184877 MS.gene070237:CDS
AAAAGAAAACTTAAAAGGCG+TGG 0.582597 8.2:-6184082 MS.gene070237:CDS
AACATGCTCTACAATAATGT+GGG 0.582958 8.2:-6183875 MS.gene070237:CDS
TCCTTCACGTATGATGCTTG+GGG 0.584714 8.2:-6183621 MS.gene070237:CDS
AGATCTGATACCATAGCCAT+AGG 0.586469 8.2:+6183680 None:intergenic
CATTCAGTTCCATCTTGTCA+GGG 0.589321 8.2:+6184047 None:intergenic
TTGGTGACTTCATGGATCCG+TGG 0.591282 8.2:-6183256 MS.gene070237:CDS
ATGGTCTAAGCTGGCTCACG+AGG 0.595641 8.2:-6184618 MS.gene070237:intron
GGTTAGACAATAATGATGCT+AGG 0.597684 8.2:-6183361 MS.gene070237:CDS
ATCTGATATCGAGTCTCCAT+AGG 0.611246 8.2:+6183578 None:intergenic
TATAGACAAGAGAATTGGGA+AGG 0.611752 8.2:-6183506 MS.gene070237:CDS
TGGAAGGTATGAACATTCTG+GGG 0.614328 8.2:+6183649 None:intergenic
TCATCATCGGATACTAACAA+AGG 0.623901 8.2:-6184878 MS.gene070237:CDS
CTGAAGTCAATCAAAAGCCA+CGG 0.625068 8.2:+6183239 None:intergenic
TCCCCAAGCATCATACGTGA+AGG 0.628693 8.2:+6183620 None:intergenic
CTTCAACCAGATGTGAAGAA+GGG 0.643415 8.2:-6184704 MS.gene070237:CDS
GAACGAGGTATCAAGAAATG+CGG 0.646070 8.2:-6184774 MS.gene070237:CDS
TACGTGAAGGAAGTAGTGGA+AGG 0.655267 8.2:+6183633 None:intergenic
ATCATACGTGAAGGAAGTAG+TGG 0.655466 8.2:+6183629 None:intergenic
CCAGATCCATAAAGTCACCA+TGG 0.674040 8.2:+6183390 None:intergenic
AATGCGGGGCTTATACGTTG+CGG 0.702899 8.2:-6184758 MS.gene070237:CDS
ACGAGGTATCAAGAAATGCG+GGG 0.708909 8.2:-6184772 MS.gene070237:CDS
ACGGATCCATGAAGTCACCA+AGG 0.720046 8.2:+6183258 None:intergenic
GGAAGGTATGAACATTCTGG+GGG 0.734313 8.2:+6183650 None:intergenic
TGGAACCAGAAATTGGAACG+AGG 0.777296 8.2:-6184789 MS.gene070237:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGTTAAAATTGTTTATATG+AGG - chr8.2:6184358-6184377 MS.gene070237:intron 15.0%
!!! ATTAATTTGTATTTGTTCTT+GGG - chr8.2:6183696-6183715 MS.gene070237:CDS 15.0%
!! AAAATTCTTGATGTCATTAT+CGG + chr8.2:6184005-6184024 None:intergenic 20.0%
!! ATACTACTTCAATGATTTAT+AGG - chr8.2:6184287-6184306 MS.gene070237:intron 20.0%
!! CAAGAAAAAGAAAACTTAAA+AGG - chr8.2:6184032-6184051 MS.gene070237:CDS 20.0%
!! TATCATCAAAATAATCAACA+AGG + chr8.2:6183671-6183690 None:intergenic 20.0%
!!! AATGATGAGTTGAATAAAAA+TGG - chr8.2:6184091-6184110 MS.gene070237:CDS 20.0%
!!! ATAAATTTGGTTGATGAAAA+AGG - chr8.2:6184667-6184686 MS.gene070237:CDS 20.0%
!!! ATAATGACATCAAGAATTTT+TGG - chr8.2:6184005-6184024 MS.gene070237:CDS 20.0%
!!! CATTAATTTGTATTTGTTCT+TGG - chr8.2:6183695-6183714 MS.gene070237:CDS 20.0%
!!! TAAATTTGGTTGATGAAAAA+GGG - chr8.2:6184668-6184687 MS.gene070237:CDS 20.0%
! AATATACCACAAGTGAAATT+TGG - chr8.2:6184157-6184176 MS.gene070237:intron 25.0%
! AGTTACATTCATCAATTTCA+GGG - chr8.2:6184393-6184412 MS.gene070237:intron 25.0%
! ATCTCTACTAAACAACTTAT+AGG + chr8.2:6183858-6183877 None:intergenic 25.0%
! GATCTAATAAATAACCAACA+AGG + chr8.2:6183751-6183770 None:intergenic 25.0%
! GTTATATAGACAAGAGAATT+GGG - chr8.2:6184609-6184628 MS.gene070237:intron 25.0%
! TGTTATATAGACAAGAGAAT+TGG - chr8.2:6184608-6184627 MS.gene070237:intron 25.0%
! TTTCAGTTCTTTAACATGTT+TGG - chr8.2:6183469-6183488 MS.gene070237:CDS 25.0%
!! TATTTTCCAAATTTCACTTG+TGG + chr8.2:6184166-6184185 None:intergenic 25.0%
!! TGAAATGTTAAAAGCATATG+TGG - chr8.2:6183300-6183319 MS.gene070237:CDS 25.0%
!!! ACAAATTTGGTTGATGAAAA+AGG - chr8.2:6184799-6184818 MS.gene070237:CDS 25.0%
!!! GTTTTTTCTTCTTCACTAAA+AGG + chr8.2:6183442-6183461 None:intergenic 25.0%
!!! TTTTAAGTTGCATGTGAATA+AGG - chr8.2:6183884-6183903 MS.gene070237:CDS 25.0%
AAAAACATGGAACCAGAAAT+TGG - chr8.2:6183323-6183342 MS.gene070237:CDS 30.0%
AAAAGAAAACTTAAAAGGCG+TGG - chr8.2:6184037-6184056 MS.gene070237:CDS 30.0%
AAACATGCTCTACAATAATG+TGG - chr8.2:6184243-6184262 MS.gene070237:intron 30.0%
AAAGCATATGTGGAAAAACA+TGG - chr8.2:6183310-6183329 MS.gene070237:CDS 30.0%
AACAAAGGGTTGTTGAAAAA+AGG - chr8.2:6183256-6183275 MS.gene070237:CDS 30.0%
AACATGCTCTACAATAATGT+GGG - chr8.2:6184244-6184263 MS.gene070237:intron 30.0%
AATGTGTGATCTAACGAATA+TGG + chr8.2:6183599-6183618 None:intergenic 30.0%
ACATTATTGTAGAGCATGTT+TGG + chr8.2:6184244-6184263 None:intergenic 30.0%
ATCAACCAAATTTATCTCAG+AGG + chr8.2:6184662-6184681 None:intergenic 30.0%
CAGTTACATTCATCAATTTC+AGG - chr8.2:6184392-6184411 MS.gene070237:intron 30.0%
CATTATTGTAGAGCATGTTT+GGG + chr8.2:6184243-6184262 None:intergenic 30.0%
GAATTGTATATGAAAGACAG+TGG + chr8.2:6184331-6184350 None:intergenic 30.0%
GGTTGTTGAAAAAAGGAAAA+TGG - chr8.2:6183263-6183282 MS.gene070237:CDS 30.0%
GTTAAAGAACTGAAAGACTT+TGG + chr8.2:6183464-6183483 None:intergenic 30.0%
GTTACATTCATCAATTTCAG+GGG - chr8.2:6184394-6184413 MS.gene070237:intron 30.0%
TACTAAACAACTTATAGGCA+TGG + chr8.2:6183853-6183872 None:intergenic 30.0%
TTCAAATAGCCAACAAGTTA+AGG - chr8.2:6184114-6184133 MS.gene070237:CDS 30.0%
! ACATGTTTGGTGAATTCAAA+TGG - chr8.2:6183482-6183501 MS.gene070237:CDS 30.0%
!! TGAGTATAAAAGTGTCTCAT+TGG - chr8.2:6184579-6184598 MS.gene070237:intron 30.0%
AAAGAAGCCAATTTCTTTGG+AGG - chr8.2:6184822-6184841 MS.gene070237:CDS 35.0%
ACATTGTCCTCCAAAGAAAT+TGG + chr8.2:6184832-6184851 None:intergenic 35.0%
ACTTTATGGATCTGGATCTT+CGG - chr8.2:6184737-6184756 MS.gene070237:CDS 35.0%
AGGAAAATGGTCAAAAGAAG+AGG - chr8.2:6183276-6183295 MS.gene070237:CDS 35.0%
AGGAAAGAAGCCAATTTCTT+TGG - chr8.2:6184819-6184838 MS.gene070237:CDS 35.0%
ATGGTAATTGATAAACTCCG+TGG + chr8.2:6183834-6183853 None:intergenic 35.0%
CATCATCGGATACTAACAAA+GGG - chr8.2:6183242-6183261 MS.gene070237:CDS 35.0%
GGTTAGACAATAATGATGCT+AGG - chr8.2:6184758-6184777 MS.gene070237:CDS 35.0%
GTAAAAGTTGTCGTCTAAGA+TGG - chr8.2:6183383-6183402 MS.gene070237:CDS 35.0%
TATAGACAAGAGAATTGGGA+AGG - chr8.2:6184613-6184632 MS.gene070237:intron 35.0%
TCAACAAGGTATAACACAAG+TGG + chr8.2:6183657-6183676 None:intergenic 35.0%
TCATCATCGGATACTAACAA+AGG - chr8.2:6183241-6183260 MS.gene070237:CDS 35.0%
TGAATTCAAATGGTCTAAGC+TGG - chr8.2:6183492-6183511 MS.gene070237:CDS 35.0%
! ATTTCTTTGGAGGACAATGT+TGG - chr8.2:6184832-6184851 MS.gene070237:CDS 35.0%
! TTTCTTTTGTGATAGTTGCC+TGG - chr8.2:6183974-6183993 MS.gene070237:CDS 35.0%
!! CTTGTGAATCCTTAACTTGT+TGG + chr8.2:6184126-6184145 None:intergenic 35.0%
!! GCATTCCTCTGAGATAAATT+TGG - chr8.2:6184654-6184673 MS.gene070237:CDS 35.0%
AATAAGGTTGAGAGAGCTTC+TGG - chr8.2:6183900-6183919 MS.gene070237:CDS 40.0%
AGATCTGATACCATAGCCAT+AGG + chr8.2:6184442-6184461 None:intergenic 40.0%
AGGGAAGAAGTCAATTGCTT+TGG - chr8.2:6184687-6184706 MS.gene070237:CDS 40.0%
ATCATACGTGAAGGAAGTAG+TGG + chr8.2:6184493-6184512 None:intergenic 40.0%
ATCTGATATCGAGTCTCCAT+AGG + chr8.2:6184544-6184563 None:intergenic 40.0%
ATGTCATTATCGGATCTTCC+AGG + chr8.2:6183995-6184014 None:intergenic 40.0%
CATTCAGTTCCATCTTGTCA+GGG + chr8.2:6184075-6184094 None:intergenic 40.0%
CTGAAGTCAATCAAAAGCCA+CGG + chr8.2:6184883-6184902 None:intergenic 40.0%
CTTCAACCAGATGTGAAGAA+GGG - chr8.2:6183415-6183434 MS.gene070237:CDS 40.0%
TCATTCAGTTCCATCTTGTC+AGG + chr8.2:6184076-6184095 None:intergenic 40.0%
TCCTCAAATTCCATCACCTA+TGG - chr8.2:6184525-6184544 MS.gene070237:intron 40.0%
TCGAACTTCTCGTATACCTA+TGG - chr8.2:6184423-6184442 MS.gene070237:intron 40.0%
TGATACCTCGTTCCAATTTC+TGG + chr8.2:6183338-6183357 None:intergenic 40.0%
TTCCTTCACGTATGATGCTT+GGG - chr8.2:6184497-6184516 MS.gene070237:intron 40.0%
TTCTCGTATACCTATGGCTA+TGG - chr8.2:6184429-6184448 MS.gene070237:intron 40.0%
! AACGAGGTATCAAGAAATGC+GGG - chr8.2:6183346-6183365 MS.gene070237:CDS 40.0%
! AGTGGAAGGTATGAACATTC+TGG + chr8.2:6184475-6184494 None:intergenic 40.0%
! GAACGAGGTATCAAGAAATG+CGG - chr8.2:6183345-6183364 MS.gene070237:CDS 40.0%
! GCATTCGTCTGAGACAAATT+TGG - chr8.2:6184786-6184805 MS.gene070237:CDS 40.0%
! GTGCTATGAATTTGAAGCCA+CGG - chr8.2:6183814-6183833 MS.gene070237:intron 40.0%
! GTGGAAGGTATGAACATTCT+GGG + chr8.2:6184474-6184493 None:intergenic 40.0%
! TGGAAGGTATGAACATTCTG+GGG + chr8.2:6184473-6184492 None:intergenic 40.0%
!! TCCATAGGTGATGGAATTTG+AGG + chr8.2:6184529-6184548 None:intergenic 40.0%
AAAGGACCCTTCTTCACATC+TGG + chr8.2:6183424-6183443 None:intergenic 45.0%
AGCAAGCCATGGTGACTTTA+TGG - chr8.2:6184723-6184742 MS.gene070237:CDS 45.0%
AGTTCCATCTTGTCAGGGAA+GGG + chr8.2:6184070-6184089 None:intergenic 45.0%
CCAACAAGGTATAACAGACG+TGG + chr8.2:6183737-6183756 None:intergenic 45.0%
CCACGTCTGTTATACCTTGT+TGG - chr8.2:6183734-6183753 MS.gene070237:intron 45.0%
CCAGATCCATAAAGTCACCA+TGG + chr8.2:6184732-6184751 None:intergenic 45.0%
CCATGGTGACTTTATGGATC+TGG - chr8.2:6184729-6184748 MS.gene070237:CDS 45.0%
CCTTCAACCAGATGTGAAGA+AGG - chr8.2:6183414-6183433 MS.gene070237:CDS 45.0%
CCTTCTTCACATCTGGTTGA+AGG + chr8.2:6183417-6183436 None:intergenic 45.0%
CTTCCTTCACGTATGATGCT+TGG - chr8.2:6184496-6184515 MS.gene070237:intron 45.0%
GACAATGTTGGAGCAAACCT+TGG - chr8.2:6184844-6184863 MS.gene070237:CDS 45.0%
GAGACTCGATATCAGATGTC+AGG - chr8.2:6184547-6184566 MS.gene070237:intron 45.0%
TATCGAGTCTCCATAGGTGA+TGG + chr8.2:6184538-6184557 None:intergenic 45.0%
TCCTTCACGTATGATGCTTG+GGG - chr8.2:6184498-6184517 MS.gene070237:intron 45.0%
TGGAACCAGAAATTGGAACG+AGG - chr8.2:6183330-6183349 MS.gene070237:CDS 45.0%
! ACGAGGTATCAAGAAATGCG+GGG - chr8.2:6183347-6183366 MS.gene070237:CDS 45.0%
! AGCAAACCTTGGTGACTTCA+TGG - chr8.2:6184855-6184874 MS.gene070237:CDS 45.0%
! GGAAGGTATGAACATTCTGG+GGG + chr8.2:6184472-6184491 None:intergenic 45.0%
! TACGTGAAGGAAGTAGTGGA+AGG + chr8.2:6184489-6184508 None:intergenic 45.0%
AACGATGTTGCAGCAAGCCA+TGG - chr8.2:6184712-6184731 MS.gene070237:CDS 50.0%
AATGCGGGGCTTATACGTTG+CGG - chr8.2:6183361-6183380 MS.gene070237:CDS 50.0%
ACGGATCCATGAAGTCACCA+AGG + chr8.2:6184864-6184883 None:intergenic 50.0%
CAGTTCCATCTTGTCAGGGA+AGG + chr8.2:6184071-6184090 None:intergenic 50.0%
TCCCCAAGCATCATACGTGA+AGG + chr8.2:6184502-6184521 None:intergenic 50.0%
! AGGTATGAACATTCTGGGGG+TGG + chr8.2:6184469-6184488 None:intergenic 50.0%
! TATGAACATTCTGGGGGTGG+AGG + chr8.2:6184466-6184485 None:intergenic 50.0%
! TTGGTGACTTCATGGATCCG+TGG - chr8.2:6184863-6184882 MS.gene070237:CDS 50.0%
GTCACCCTTCCCTGACAAGA+TGG - chr8.2:6184063-6184082 MS.gene070237:CDS 55.0%
! ATGGTCTAAGCTGGCTCACG+AGG - chr8.2:6183501-6183520 MS.gene070237:CDS 55.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 6183235 6184906 6183235 ID=MS.gene070237
chr8.2 mRNA 6183235 6184906 6183235 ID=MS.gene070237.t1;Parent=MS.gene070237
chr8.2 exon 6184619 6184906 6184619 ID=MS.gene070237.t1.exon1;Parent=MS.gene070237.t1
chr8.2 CDS 6184619 6184906 6184619 ID=cds.MS.gene070237.t1;Parent=MS.gene070237.t1
chr8.2 exon 6183833 6184152 6183833 ID=MS.gene070237.t1.exon2;Parent=MS.gene070237.t1
chr8.2 CDS 6183833 6184152 6183833 ID=cds.MS.gene070237.t1;Parent=MS.gene070237.t1
chr8.2 exon 6183235 6183727 6183235 ID=MS.gene070237.t1.exon3;Parent=MS.gene070237.t1
chr8.2 CDS 6183235 6183727 6183235 ID=cds.MS.gene070237.t1;Parent=MS.gene070237.t1
Gene Sequence

>MS.gene070237

ATGTCTTCATCATCGGATACTAACAAAGGGTTGTTGAAAAAAGGAAAATGGTCAAAAGAAGAGGATGAAATGTTAAAAGCATATGTGGAAAAACATGGAACCAGAAATTGGAACGAGGTATCAAGAAATGCGGGGCTTATACGTTGCGGTAAAAGTTGTCGTCTAAGATGGTATAATCACCTTCAACCAGATGTGAAGAAGGGTCCTTTTAGTGAAGAAGAAAAAACCAAAGTCTTTCAGTTCTTTAACATGTTTGGTGAATTCAAATGGTCTAAGCTGGCTCACGAGGTTTTATCTTCATGCTTTACTTCTTTTCTTTTTGTTTTATTTGAAATATTTATCTATTCTTCTGCAATTGCAACCATATTCGTTAGATCACACATTGTGCAATTTAATTAAATACTATACTATGATTTTTACCACTTGTGTTATACCTTGTTGATTATTTTGATGATAATGTCATTAATTTGTATTTGTTCTTGGGAGACTCACATATTTACCACGTCTGTTATACCTTGTTGGTTATTTATTAGATCAGTTTCTACTTTTTATTGAAACAGATTTATTAGTTAGCAATTTGTGCTATGAATTTGAAGCCACGGAGTTTATCAATTACCATGCCTATAAGTTGTTTAGTAGAGATTGATAGTTTTAAGTTGCATGTGAATAAGGTTGAGAGAGCTTCTGGAAAATCTAGCTTTGCATGTTCTTGTATTTTCTTGATCGTTAATTTGTATTCTTTCTTTTGTGATAGTTGCCTGGAAGATCCGATAATGACATCAAGAATTTTTGGAATGCAAGAAAAAGAAAACTTAAAAGGCGTGGCTTGTCACCCTTCCCTGACAAGATGGAACTGAATGATGAGTTGAATAAAAATGGTTCAAATAGCCAACAAGTTAAGGATTCACAAGATGATGAATTTAATATACCACAAGTGAAATTTGGAAAATATTCATCAATTTATGATAAGATAAGTGAAAACAACTTTGAAAAACTTTTAGATGTCCCAAACATGCTCTACAATAATGTGGGAAGTAATTCTACAAGCAATCATACTACTTCAATGATTTATAGGTGAGTAGATTATGTAATGCCACTGTCTTTCATATACAATTCATATTATATGTTAAAATTGTTTATATGAGGTGTTAAATTTACAGTTACATTCATCAATTTCAGGGGTAGCATTCGAACTTCTCGTATACCTATGGCTATGGTATCAGATCTACCTCCACCCCCAGAATGTTCATACCTTCCACTACTTCCTTCACGTATGATGCTTGGGGAGTATCCTCAAATTCCATCACCTATGGAGACTCGATATCAGATGTCAGGATCAAGTTCTGAGTATAAAAGTGTCTCATTGGAGTCTATGTTATATAGACAAGAGAATTGGGAAGGCTTCGATGCTAGTCACGTGCATTCCTCTGAGATAAATTTGGTTGATGAAAAAGGGAAGAAGTCAATTGCTTTGGAGAACGATGTTGCAGCAAGCCATGGTGACTTTATGGATCTGGATCTTCGGTTAGACAATAATGATGCTAGGCATGTGCATTCGTCTGAGACAAATTTGGTTGATGAAAAAGGAAAGAAGCCAATTTCTTTGGAGGACAATGTTGGAGCAAACCTTGGTGACTTCATGGATCCGTGGCTTTTGATTGACTTCAGTTGA
Protein sequence

>MS.gene070237.t1

MSSSSDTNKGLLKKGKWSKEEDEMLKAYVEKHGTRNWNEVSRNAGLIRCGKSCRLRWYNHLQPDVKKGPFSEEEKTKVFQFFNMFGEFKWSKLAHELPGRSDNDIKNFWNARKRKLKRRGLSPFPDKMELNDELNKNGSNSQQVKDSQDDEFNIPQVKFGKYSSIYDKISENNFEKLLDVPNMLYNNVGSNSTSNHTTSMIYRGSIRTSRIPMAMVSDLPPPPECSYLPLLPSRMMLGEYPQIPSPMETRYQMSGSSSEYKSVSLESMLYRQENWEGFDASHVHSSEINLVDEKGKKSIALENDVAASHGDFMDLDLRLDNNDARHVHSSETNLVDEKGKKPISLEDNVGANLGDFMDPWLLIDFS