Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070327.t1 | PNX73002.1 | 49.6 | 799 | 139 | 8 | 54 | 622 | 1 | 765 | 1.10E-186 | 663.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070327.t1 | Q9SZL8 | 32.6 | 221 | 132 | 6 | 54 | 259 | 77 | 295 | 5.4e-20 | 100.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070327.t1 | A0A2K3L384 | 49.6 | 799 | 139 | 8 | 54 | 622 | 1 | 765 | 8.2e-187 | 663.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene070327.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070327.t1 | MTR_0645s0010 | 97.561 | 82 | 2 | 0 | 252 | 333 | 44 | 125 | 1.80e-47 | 163 |
| MS.gene070327.t1 | MTR_7g446520 | 40.952 | 210 | 109 | 1 | 43 | 252 | 81 | 275 | 7.48e-44 | 160 |
| MS.gene070327.t1 | MTR_7g446480 | 48.062 | 129 | 67 | 0 | 124 | 252 | 140 | 268 | 1.30e-32 | 128 |
| MS.gene070327.t1 | MTR_7g446510 | 45.926 | 135 | 73 | 0 | 118 | 252 | 149 | 283 | 3.06e-31 | 125 |
| MS.gene070327.t1 | MTR_7g028855 | 43.046 | 151 | 83 | 1 | 43 | 190 | 113 | 263 | 3.57e-30 | 124 |
| MS.gene070327.t1 | MTR_1g070355 | 32.031 | 256 | 156 | 6 | 6 | 252 | 31 | 277 | 2.59e-28 | 120 |
| MS.gene070327.t1 | MTR_5g076070 | 28.796 | 191 | 130 | 2 | 25 | 209 | 25 | 215 | 2.04e-24 | 103 |
| MS.gene070327.t1 | MTR_4g035820 | 30.233 | 258 | 156 | 8 | 8 | 252 | 36 | 282 | 3.19e-21 | 98.6 |
| MS.gene070327.t1 | MTR_6g022080 | 28.070 | 171 | 120 | 1 | 42 | 209 | 77 | 247 | 1.21e-20 | 92.0 |
| MS.gene070327.t1 | MTR_0402s0040 | 34.682 | 173 | 108 | 5 | 54 | 223 | 30 | 200 | 3.52e-20 | 94.7 |
| MS.gene070327.t1 | MTR_8g035530 | 51.429 | 70 | 34 | 0 | 41 | 110 | 5 | 74 | 1.76e-18 | 80.5 |
| MS.gene070327.t1 | MTR_3g080590 | 43.820 | 89 | 48 | 1 | 12 | 100 | 69 | 155 | 1.26e-16 | 78.2 |
| MS.gene070327.t1 | MTR_6g051425 | 27.149 | 221 | 134 | 8 | 58 | 257 | 25 | 239 | 1.35e-14 | 75.9 |
| MS.gene070327.t1 | MTR_1g008290 | 30.065 | 153 | 94 | 4 | 90 | 242 | 1 | 140 | 5.02e-14 | 70.1 |
| MS.gene070327.t1 | MTR_5g015480 | 34.959 | 123 | 72 | 5 | 54 | 171 | 60 | 179 | 9.52e-14 | 72.0 |
| MS.gene070327.t1 | MTR_3g450850 | 27.273 | 209 | 139 | 5 | 56 | 252 | 53 | 260 | 3.63e-12 | 68.6 |
| MS.gene070327.t1 | MTR_8g468460 | 39.583 | 96 | 56 | 2 | 252 | 346 | 11 | 105 | 5.86e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070327.t1 | AT4G38180 | 31.674 | 221 | 136 | 4 | 53 | 259 | 76 | 295 | 9.43e-22 | 100 |
| MS.gene070327.t1 | AT4G38180 | 27.835 | 194 | 125 | 5 | 210 | 391 | 448 | 638 | 5.30e-11 | 66.2 |
| MS.gene070327.t1 | AT5G28530 | 27.907 | 215 | 140 | 5 | 56 | 256 | 61 | 274 | 2.67e-17 | 86.3 |
| MS.gene070327.t1 | AT5G28530 | 27.907 | 215 | 140 | 5 | 56 | 256 | 61 | 274 | 2.68e-17 | 86.3 |
| MS.gene070327.t1 | AT5G28530 | 27.907 | 215 | 140 | 5 | 56 | 256 | 61 | 274 | 2.68e-17 | 86.3 |
| MS.gene070327.t1 | AT5G28530 | 27.941 | 204 | 136 | 5 | 56 | 254 | 61 | 258 | 3.41e-17 | 85.9 |
| MS.gene070327.t1 | AT5G28530 | 27.941 | 204 | 136 | 5 | 56 | 254 | 61 | 258 | 3.43e-17 | 85.9 |
| MS.gene070327.t1 | AT1G10240 | 30.151 | 199 | 131 | 6 | 56 | 247 | 54 | 251 | 1.39e-15 | 80.9 |
| MS.gene070327.t1 | AT1G10240 | 30.151 | 199 | 131 | 6 | 56 | 247 | 54 | 251 | 1.39e-15 | 80.9 |
| MS.gene070327.t1 | AT3G07500 | 32.749 | 171 | 89 | 7 | 54 | 213 | 37 | 192 | 6.68e-13 | 68.9 |
| MS.gene070327.t1 | AT4G38170 | 26.316 | 190 | 125 | 5 | 210 | 387 | 213 | 399 | 5.04e-11 | 66.2 |
| MS.gene070327.t1 | AT4G15090 | 22.776 | 281 | 202 | 6 | 251 | 522 | 474 | 748 | 9.73e-11 | 65.5 |
| MS.gene070327.t1 | AT4G15090 | 22.776 | 281 | 202 | 6 | 251 | 522 | 474 | 748 | 9.73e-11 | 65.5 |
| MS.gene070327.t1 | AT4G15090 | 22.776 | 281 | 202 | 6 | 251 | 522 | 474 | 748 | 9.73e-11 | 65.5 |
| MS.gene070327.t1 | AT4G15090 | 22.776 | 281 | 202 | 6 | 251 | 522 | 474 | 748 | 9.73e-11 | 65.5 |
| MS.gene070327.t1 | AT4G15090 | 22.776 | 281 | 202 | 6 | 251 | 522 | 474 | 748 | 9.73e-11 | 65.5 |
Find 121 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTGGGTTTAGCATTATC+TGG | 0.190370 | 4.1:-5961254 | None:intergenic |
| TCAATATTAACTGTAATATT+TGG | 0.204657 | 4.1:-5961838 | None:intergenic |
| TTCATTTGATTCCGAATTAT+AGG | 0.217986 | 4.1:+5959674 | MS.gene070327:CDS |
| TTCCTCATTATGACCTTCTT+TGG | 0.219846 | 4.1:-5961042 | None:intergenic |
| ATGATTTCATTCAGAAGATT+TGG | 0.259205 | 4.1:+5959596 | MS.gene070327:CDS |
| AATGTCTATATTTGTTGTTT+TGG | 0.267598 | 4.1:-5961791 | None:intergenic |
| TCATATACTAGGTTTCTTAA+TGG | 0.276146 | 4.1:+5959759 | MS.gene070327:CDS |
| TTCAGTAGTGATAATGGTTT+TGG | 0.283086 | 4.1:+5959265 | MS.gene070327:CDS |
| CATGATGTTGATAATATCTT+TGG | 0.283165 | 4.1:+5961706 | MS.gene070327:CDS |
| AGAAGAATGAAGATAGTAAT+AGG | 0.287511 | 4.1:+5959530 | MS.gene070327:CDS |
| GGAATCAAATGAACAAGATT+TGG | 0.296397 | 4.1:-5959664 | None:intergenic |
| AACAACATTCCTTTGTTTCC+TGG | 0.297613 | 4.1:+5962119 | MS.gene070327:CDS |
| TCACTCAATTTCCTATAATT+CGG | 0.322105 | 4.1:-5959685 | None:intergenic |
| CATATACTAGGTTTCTTAAT+GGG | 0.328869 | 4.1:+5959760 | MS.gene070327:CDS |
| GGTTTCTTAATGGGCCAAAA+AGG | 0.332076 | 4.1:+5959769 | MS.gene070327:CDS |
| GTAGAATTCAGTAGTGATAA+TGG | 0.335573 | 4.1:+5959259 | MS.gene070327:CDS |
| ACTTAGTTCATGGTTGTGAT+TGG | 0.360489 | 4.1:-5959638 | None:intergenic |
| GAAGTTAATCCACCCACATT+TGG | 0.365859 | 4.1:-5962056 | None:intergenic |
| CACTTACCGCTGCATTCAAT+AGG | 0.379313 | 4.1:+5961090 | MS.gene070327:CDS |
| CTTAGTTCATGGTTGTGATT+GGG | 0.381070 | 4.1:-5959637 | None:intergenic |
| GAGTTTACCTTTACAGATGA+TGG | 0.397514 | 4.1:+5959937 | MS.gene070327:CDS |
| TAACAATGCCATTGATTATG+AGG | 0.400069 | 4.1:+5961130 | MS.gene070327:CDS |
| AAAGTTCCTAGAAGTCAAAA+AGG | 0.400507 | 4.1:+5960734 | MS.gene070327:CDS |
| GTGTTGACAACTTCCTTGCC+TGG | 0.404467 | 4.1:+5960675 | MS.gene070327:CDS |
| CATTTGGTACTGACATAGAA+TGG | 0.405927 | 4.1:-5961678 | None:intergenic |
| CTACAGACATAATGAATTGT+TGG | 0.407345 | 4.1:+5960623 | MS.gene070327:CDS |
| AATCTTCTGAATGAAATCAT+AGG | 0.410758 | 4.1:-5959593 | None:intergenic |
| AAAGGAGGACATGAAAATCT+TGG | 0.412933 | 4.1:+5959787 | MS.gene070327:CDS |
| AAATGTCAATGGCAACAATA+AGG | 0.413929 | 4.1:+5961208 | MS.gene070327:CDS |
| GATTTGGAGGACTTAGTTCA+TGG | 0.422475 | 4.1:-5959648 | None:intergenic |
| TCGGATAAACAGATTGTTAG+TGG | 0.430560 | 4.1:+5959709 | MS.gene070327:CDS |
| TAACATACACTATTTGTTCC+AGG | 0.434470 | 4.1:-5962137 | None:intergenic |
| AAAGCGTATGCTCGTTTCCA+TGG | 0.435800 | 4.1:+5959406 | MS.gene070327:CDS |
| ACAGTTTACGAGCGTGTTGA+AGG | 0.436704 | 4.1:+5962238 | MS.gene070327:intron |
| CAAGGAAGGGTTAGAATTGA+AGG | 0.441504 | 4.1:+5959847 | MS.gene070327:CDS |
| TCAACATCATGTCTACCATT+TGG | 0.448971 | 4.1:-5961694 | None:intergenic |
| CATTGATTATGAGGAAGCTT+TGG | 0.458582 | 4.1:+5961139 | MS.gene070327:CDS |
| CTCATTATGACCTTCTTTGG+AGG | 0.460106 | 4.1:-5961039 | None:intergenic |
| AATAGGCAAACCATGCGAAC+TGG | 0.460478 | 4.1:+5959547 | MS.gene070327:CDS |
| AAAGTCTAATTTGCAAAAGA+TGG | 0.463829 | 4.1:+5960979 | MS.gene070327:CDS |
| AAGGTCAATAAATCTGTTGT+TGG | 0.472287 | 4.1:+5961227 | MS.gene070327:CDS |
| GTTAGTGGTTTGCATTCTCA+AGG | 0.476835 | 4.1:+5959724 | MS.gene070327:CDS |
| ATGCTGAGTTGCTTCACTAT+AGG | 0.481546 | 4.1:-5959215 | None:intergenic |
| GCGATTACTTTGCAATAAAG+AGG | 0.481547 | 4.1:+5959486 | MS.gene070327:CDS |
| GTTTCCATGGGTTTGTCGTA+AGG | 0.482758 | 4.1:+5959419 | MS.gene070327:CDS |
| GGGTTTCATCATTCATGTCA+TGG | 0.487067 | 4.1:-5961657 | None:intergenic |
| ATTTGGTACTGACATAGAAT+GGG | 0.493491 | 4.1:-5961677 | None:intergenic |
| CAAAGCTTCCTCATAATCAA+TGG | 0.494233 | 4.1:-5961138 | None:intergenic |
| GAAGCTTCACGCTCAAATCC+AGG | 0.499670 | 4.1:-5960693 | None:intergenic |
| TCATCATTTGCCTCCAAAGA+AGG | 0.501389 | 4.1:+5961029 | MS.gene070327:CDS |
| CAAGATGGAACCATGGTGTT+GGG | 0.503043 | 4.1:+5961988 | MS.gene070327:CDS |
| AACTTCTTCACAATTCCCTC+CGG | 0.506498 | 4.1:+5962073 | MS.gene070327:CDS |
| AAATGATGATATAAAAGCTA+TGG | 0.514775 | 4.1:+5959348 | MS.gene070327:CDS |
| GTCACTCACCATGCTGAGGT+TGG | 0.515437 | 4.1:+5960783 | MS.gene070327:CDS |
| TTATAGGAAATTGAGTGAAT+CGG | 0.515530 | 4.1:+5959690 | MS.gene070327:CDS |
| AAGGAAGGATGATGTGGTAA+AGG | 0.518755 | 4.1:+5959438 | MS.gene070327:CDS |
| CCATGGGTTTGTCGTAAGGA+AGG | 0.524385 | 4.1:+5959423 | MS.gene070327:CDS |
| CGTCGTGAGGGAAATGTCAA+TGG | 0.525065 | 4.1:+5961197 | MS.gene070327:CDS |
| TGCCACATGGATTTGCAAGA+TGG | 0.527779 | 4.1:+5961973 | MS.gene070327:CDS |
| GTAAGAACCTGTCATATACT+AGG | 0.532163 | 4.1:+5959748 | MS.gene070327:CDS |
| GATTATGAGGAAGCTTTGGA+AGG | 0.532969 | 4.1:+5961143 | MS.gene070327:CDS |
| TAACCGACCATCATCTGTAA+AGG | 0.533842 | 4.1:-5959944 | None:intergenic |
| AAATGGTCATGTTCCGCCGA+TGG | 0.535969 | 4.1:+5961066 | MS.gene070327:CDS |
| ATCAAATGAACAAGATTTGG+AGG | 0.541540 | 4.1:-5959661 | None:intergenic |
| AATGGTCATGTTCCGCCGAT+GGG | 0.542538 | 4.1:+5961067 | MS.gene070327:CDS |
| AAGCGTATGCTCGTTTCCAT+GGG | 0.546934 | 4.1:+5959407 | MS.gene070327:CDS |
| ACTTCATGACAGAAATAATG+TGG | 0.547790 | 4.1:-5960932 | None:intergenic |
| CCACCGTACACAGGAAAAGC+GGG | 0.548539 | 4.1:-5962029 | None:intergenic |
| TAAGAAACCTAGTATATGAC+AGG | 0.549198 | 4.1:-5959755 | None:intergenic |
| CATTCTATGTCAGTACCAAA+TGG | 0.549713 | 4.1:+5961679 | MS.gene070327:CDS |
| GGTATTAAACGTAAGAGAGA+TGG | 0.556812 | 4.1:+5961727 | MS.gene070327:CDS |
| AAGAGAGATGGTGACAAAGC+CGG | 0.567634 | 4.1:+5961739 | MS.gene070327:CDS |
| ACAGAAATAATGTGGGAACA+TGG | 0.568395 | 4.1:-5960924 | None:intergenic |
| AGCAAGACATCCAGTTCGCA+TGG | 0.572129 | 4.1:-5959557 | None:intergenic |
| GCAAGATGGAACCATGGTGT+TGG | 0.572620 | 4.1:+5961987 | MS.gene070327:CDS |
| AACCATGGTGTTGGGTATGT+TGG | 0.578818 | 4.1:+5961996 | MS.gene070327:CDS |
| ATTATGAGGAAGCTTTGGAA+GGG | 0.579688 | 4.1:+5961144 | MS.gene070327:CDS |
| CGATTACTTTGCAATAAAGA+GGG | 0.582695 | 4.1:+5959487 | MS.gene070327:CDS |
| GGAATGTTGTTATAATGTGA+TGG | 0.585101 | 4.1:-5962107 | None:intergenic |
| ATTTGGAGTCACAGAAGCAT+CGG | 0.589265 | 4.1:-5961821 | None:intergenic |
| GTACGGTGGGATTCCAAATG+TGG | 0.589315 | 4.1:+5962043 | MS.gene070327:CDS |
| AAGATAAATGTACGTCGTGA+GGG | 0.589836 | 4.1:+5961185 | MS.gene070327:CDS |
| GGCAAGGAAGTTGTCAACAC+AGG | 0.590629 | 4.1:-5960672 | None:intergenic |
| TGCATTCAATAGGCTTTGTG+AGG | 0.594478 | 4.1:+5961100 | MS.gene070327:CDS |
| TATAACTACACTGATCATCA+AGG | 0.599053 | 4.1:+5959829 | MS.gene070327:CDS |
| CTCCAAAGAAGGTCATAATG+AGG | 0.600558 | 4.1:+5961040 | MS.gene070327:CDS |
| CAAGATAAATGTACGTCGTG+AGG | 0.601675 | 4.1:+5961184 | MS.gene070327:CDS |
| ACTACACTGATCATCAAGGA+AGG | 0.601680 | 4.1:+5959833 | MS.gene070327:CDS |
| CAGCGGTAAGTGCCCATCGG+CGG | 0.602402 | 4.1:-5961079 | None:intergenic |
| CACTATTTCCAACCTCAGCA+TGG | 0.602509 | 4.1:-5960791 | None:intergenic |
| TACGGTGGGATTCCAAATGT+GGG | 0.603843 | 4.1:+5962044 | MS.gene070327:CDS |
| CCCACCGTACACAGGAAAAG+CGG | 0.608963 | 4.1:-5962030 | None:intergenic |
| TTCACGCTCAAATCCAGGCA+AGG | 0.610482 | 4.1:-5960688 | None:intergenic |
| TACGAGCGTGTTGAAGGACA+TGG | 0.612523 | 4.1:+5962244 | MS.gene070327:CDS |
| TTGTAGAATGGTATGCCACA+TGG | 0.614759 | 4.1:+5961960 | MS.gene070327:intron |
| ATCTGTCACTCACCATGCTG+AGG | 0.616402 | 4.1:+5960779 | MS.gene070327:CDS |
| TGTCGTAAGGAAGGATGATG+TGG | 0.617262 | 4.1:+5959432 | MS.gene070327:CDS |
| CTATTTGTTCCAGGAAACAA+AGG | 0.620146 | 4.1:-5962128 | None:intergenic |
| TGTTGTTATAATGTGATGGA+AGG | 0.624294 | 4.1:-5962103 | None:intergenic |
| CCTTCCTTACGACAAACCCA+TGG | 0.631542 | 4.1:-5959423 | None:intergenic |
| TTACCTTTACAGATGATGGT+CGG | 0.632472 | 4.1:+5959941 | MS.gene070327:CDS |
| AGAAAGACAGAGAATTGCAA+TGG | 0.633911 | 4.1:+5959301 | MS.gene070327:CDS |
| CTTCATGACAGAAATAATGT+GGG | 0.634223 | 4.1:-5960931 | None:intergenic |
| CCAGATAATGCTAAACCCAA+AGG | 0.637551 | 4.1:+5961254 | MS.gene070327:CDS |
| TTTGGAATCCCACCGTACAC+AGG | 0.642001 | 4.1:-5962038 | None:intergenic |
| TCTCGATAATGATACTGTAG+AGG | 0.643267 | 4.1:+5959237 | MS.gene070327:CDS |
| ATGCAGCGGTAAGTGCCCAT+CGG | 0.647794 | 4.1:-5961082 | None:intergenic |
| TGTCATGAAGTATGAGAACA+TGG | 0.649925 | 4.1:+5960944 | MS.gene070327:CDS |
| CTACACTGATCATCAAGGAA+GGG | 0.653825 | 4.1:+5959834 | MS.gene070327:CDS |
| GGTGGGATTCCAAATGTGGG+TGG | 0.655522 | 4.1:+5962047 | MS.gene070327:CDS |
| TGTGATGGAAGGATGTCTGC+CGG | 0.655796 | 4.1:-5962092 | None:intergenic |
| GGAAGGGTTAGAATTGAAGG+TGG | 0.663188 | 4.1:+5959850 | MS.gene070327:CDS |
| ACAAAGCCTATTGAATGCAG+CGG | 0.663816 | 4.1:-5961096 | None:intergenic |
| TGATGTGGTAAAGGATCACG+AGG | 0.665235 | 4.1:+5959447 | MS.gene070327:CDS |
| ATGGAAGGATGTCTGCCGGA+GGG | 0.699279 | 4.1:-5962088 | None:intergenic |
| AGCTATGGAGTTTAGCACAG+AGG | 0.706449 | 4.1:+5959363 | MS.gene070327:CDS |
| TACCAACATACCCAACACCA+TGG | 0.713448 | 4.1:-5961998 | None:intergenic |
| TTCCATCTTGCAAATCCATG+TGG | 0.717728 | 4.1:-5961975 | None:intergenic |
| GGATTTGCAAGATGGAACCA+TGG | 0.726905 | 4.1:+5961981 | MS.gene070327:CDS |
| GATGGAAGGATGTCTGCCGG+AGG | 0.734244 | 4.1:-5962089 | None:intergenic |
| GATGTGGTAAAGGATCACGA+GGG | 0.855257 | 4.1:+5959448 | MS.gene070327:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCAATAAGTTTTAAAAAAT+TGG | - | chr4.1:5962165-5962184 | None:intergenic | 10.0% |
| !! | AAATCTTGGATTTATAAAAA+AGG | + | chr4.1:5959801-5959820 | MS.gene070327:CDS | 15.0% |
| !! | TCAATATTAACTGTAATATT+TGG | - | chr4.1:5961841-5961860 | None:intergenic | 15.0% |
| !!! | TGTATGATTTTTTCATTTTA+GGG | - | chr4.1:5961283-5961302 | None:intergenic | 15.0% |
| !!! | TTGTATGATTTTTTCATTTT+AGG | - | chr4.1:5961284-5961303 | None:intergenic | 15.0% |
| !! | AAATGATGATATAAAAGCTA+TGG | + | chr4.1:5959348-5959367 | MS.gene070327:CDS | 20.0% |
| !! | ATATAAATTGAAGCAAATGT+GGG | + | chr4.1:5960455-5960474 | MS.gene070327:intron | 20.0% |
| !!! | AATGTCTATATTTGTTGTTT+TGG | - | chr4.1:5961794-5961813 | None:intergenic | 20.0% |
| !!! | GTATGATTTTTTCATTTTAG+GGG | - | chr4.1:5961282-5961301 | None:intergenic | 20.0% |
| !!! | TCGGTTAGAAAATATATTTT+GGG | + | chr4.1:5959960-5959979 | MS.gene070327:intron | 20.0% |
| !!! | TGGAAATAGTGTAATTTTTA+GGG | + | chr4.1:5960803-5960822 | MS.gene070327:CDS | 20.0% |
| !!! | TTGGAAATAGTGTAATTTTT+AGG | + | chr4.1:5960802-5960821 | MS.gene070327:CDS | 20.0% |
| ! | AAACAATAGAGACATATAAG+TGG | + | chr4.1:5960142-5960161 | MS.gene070327:intron | 25.0% |
| ! | AACAATAGAGACATATAAGT+GGG | + | chr4.1:5960143-5960162 | MS.gene070327:intron | 25.0% |
| ! | AATCCTGTAAAAATTACAAG+CGG | - | chr4.1:5960072-5960091 | None:intergenic | 25.0% |
| ! | AATCTTCTGAATGAAATCAT+AGG | - | chr4.1:5959596-5959615 | None:intergenic | 25.0% |
| ! | AATTAAAGCACATGCAAAAA+TGG | - | chr4.1:5960115-5960134 | None:intergenic | 25.0% |
| ! | AATTATGCAGAAAATCAACA+AGG | - | chr4.1:5960584-5960603 | None:intergenic | 25.0% |
| ! | AGAAGAATGAAGATAGTAAT+AGG | + | chr4.1:5959530-5959549 | MS.gene070327:CDS | 25.0% |
| ! | ATGATTTCATTCAGAAGATT+TGG | + | chr4.1:5959596-5959615 | MS.gene070327:CDS | 25.0% |
| ! | ATGGTCAAAAACAATAAAGA+AGG | + | chr4.1:5960998-5961017 | MS.gene070327:CDS | 25.0% |
| ! | CATATAAATTGAAGCAAATG+TGG | + | chr4.1:5960454-5960473 | MS.gene070327:intron | 25.0% |
| ! | CATATACTAGGTTTCTTAAT+GGG | + | chr4.1:5959760-5959779 | MS.gene070327:CDS | 25.0% |
| ! | TCACTCAATTTCCTATAATT+CGG | - | chr4.1:5959688-5959707 | None:intergenic | 25.0% |
| ! | TCATATACTAGGTTTCTTAA+TGG | + | chr4.1:5959759-5959778 | MS.gene070327:CDS | 25.0% |
| ! | TTATAGGAAATTGAGTGAAT+CGG | + | chr4.1:5959690-5959709 | MS.gene070327:CDS | 25.0% |
| ! | TTCATTTGATTCCGAATTAT+AGG | + | chr4.1:5959674-5959693 | MS.gene070327:CDS | 25.0% |
| !! | AAAGGTAAACTCTGAAAAAA+AGG | - | chr4.1:5959929-5959948 | None:intergenic | 25.0% |
| !! | AAAGTCTAATTTGCAAAAGA+TGG | + | chr4.1:5960979-5960998 | MS.gene070327:CDS | 25.0% |
| !! | ATACCTGTTCTTTTTATAAG+TGG | - | chr4.1:5960043-5960062 | None:intergenic | 25.0% |
| !! | GTCGGTTAGAAAATATATTT+TGG | + | chr4.1:5959959-5959978 | MS.gene070327:intron | 25.0% |
| !! | TTTTGCAAATTAGACTTTCT+GGG | - | chr4.1:5960977-5960996 | None:intergenic | 25.0% |
| !!! | ACTTTATTTCTTTTATGTCC+AGG | + | chr4.1:5961624-5961643 | MS.gene070327:intron | 25.0% |
| !!! | ATGTTTTGATTGTTGTAGAA+TGG | + | chr4.1:5961948-5961967 | MS.gene070327:intron | 25.0% |
| !!! | CATGATGTTGATAATATCTT+TGG | + | chr4.1:5961706-5961725 | MS.gene070327:CDS | 25.0% |
| AAAGTTCCTAGAAGTCAAAA+AGG | + | chr4.1:5960734-5960753 | MS.gene070327:CDS | 30.0% | |
| AAATGTCAATGGCAACAATA+AGG | + | chr4.1:5961208-5961227 | MS.gene070327:CDS | 30.0% | |
| AAGGTCAATAAATCTGTTGT+TGG | + | chr4.1:5961227-5961246 | MS.gene070327:CDS | 30.0% | |
| AAGGTGTGAATTCATTTATC+AGG | + | chr4.1:5960535-5960554 | MS.gene070327:intron | 30.0% | |
| ACTTCATGACAGAAATAATG+TGG | - | chr4.1:5960935-5960954 | None:intergenic | 30.0% | |
| AGGTCATAATGAGGAAAAAA+TGG | + | chr4.1:5961049-5961068 | MS.gene070327:CDS | 30.0% | |
| ATCAAATGAACAAGATTTGG+AGG | - | chr4.1:5959664-5959683 | None:intergenic | 30.0% | |
| ATGGTGTATCAAAGAATAAG+TGG | + | chr4.1:5960421-5960440 | MS.gene070327:intron | 30.0% | |
| CGATTACTTTGCAATAAAGA+GGG | + | chr4.1:5959487-5959506 | MS.gene070327:CDS | 30.0% | |
| CTACAGACATAATGAATTGT+TGG | + | chr4.1:5960623-5960642 | MS.gene070327:CDS | 30.0% | |
| CTTCATGACAGAAATAATGT+GGG | - | chr4.1:5960934-5960953 | None:intergenic | 30.0% | |
| GGAATCAAATGAACAAGATT+TGG | - | chr4.1:5959667-5959686 | None:intergenic | 30.0% | |
| GGAATGTTGTTATAATGTGA+TGG | - | chr4.1:5962110-5962129 | None:intergenic | 30.0% | |
| GTAGAATTCAGTAGTGATAA+TGG | + | chr4.1:5959259-5959278 | MS.gene070327:CDS | 30.0% | |
| TAACATACACTATTTGTTCC+AGG | - | chr4.1:5962140-5962159 | None:intergenic | 30.0% | |
| TAAGAAACCTAGTATATGAC+AGG | - | chr4.1:5959758-5959777 | None:intergenic | 30.0% | |
| TATAACTACACTGATCATCA+AGG | + | chr4.1:5959829-5959848 | MS.gene070327:CDS | 30.0% | |
| TGGTGTATCAAAGAATAAGT+GGG | + | chr4.1:5960422-5960441 | MS.gene070327:intron | 30.0% | |
| ! | AGGCTTGATTATGAATGTTT+TGG | + | chr4.1:5959997-5960016 | MS.gene070327:intron | 30.0% |
| ! | CTTTTGCAAATTAGACTTTC+TGG | - | chr4.1:5960978-5960997 | None:intergenic | 30.0% |
| ! | GGTGTTAAATGTGTTTTCAA+AGG | + | chr4.1:5960164-5960183 | MS.gene070327:intron | 30.0% |
| ! | TAACAATGCCATTGATTATG+AGG | + | chr4.1:5961130-5961149 | MS.gene070327:CDS | 30.0% |
| ! | TGTTGTTATAATGTGATGGA+AGG | - | chr4.1:5962106-5962125 | None:intergenic | 30.0% |
| ! | TTGAACTCTTCTAAGAATCT+GGG | - | chr4.1:5960333-5960352 | None:intergenic | 30.0% |
| ! | TTTTGGATGTTTTTCGTACA+TGG | - | chr4.1:5960190-5960209 | None:intergenic | 30.0% |
| !! | ATTTGGTACTGACATAGAAT+GGG | - | chr4.1:5961680-5961699 | None:intergenic | 30.0% |
| !! | GCTACTTTGAGTTATTTTCA+GGG | + | chr4.1:5959883-5959902 | MS.gene070327:CDS | 30.0% |
| !!! | GATAATGGTTTTGGTAATGA+TGG | + | chr4.1:5959274-5959293 | MS.gene070327:CDS | 30.0% |
| !!! | TGCTACTTTGAGTTATTTTC+AGG | + | chr4.1:5959882-5959901 | MS.gene070327:CDS | 30.0% |
| !!! | TTCAGTAGTGATAATGGTTT+TGG | + | chr4.1:5959265-5959284 | MS.gene070327:CDS | 30.0% |
| !!! | TTTTTAGGGTTAACGTTTAC+CGG | + | chr4.1:5960817-5960836 | MS.gene070327:CDS | 30.0% |
| AAAGGAGGACATGAAAATCT+TGG | + | chr4.1:5959787-5959806 | MS.gene070327:CDS | 35.0% | |
| AAGAGAGTTGTTGACAGTTA+TGG | + | chr4.1:5960402-5960421 | MS.gene070327:intron | 35.0% | |
| AAGATAAATGTACGTCGTGA+GGG | + | chr4.1:5961185-5961204 | MS.gene070327:CDS | 35.0% | |
| ACAGAAATAATGTGGGAACA+TGG | - | chr4.1:5960927-5960946 | None:intergenic | 35.0% | |
| ACAGCAAATTCATCACAAGA+TGG | - | chr4.1:5961594-5961613 | None:intergenic | 35.0% | |
| ACATCAATTCCAGCAAGTAT+TGG | - | chr4.1:5961377-5961396 | None:intergenic | 35.0% | |
| ACGCCACTTATAAAAAGAAC+AGG | + | chr4.1:5960037-5960056 | MS.gene070327:intron | 35.0% | |
| ACTTAGTTCATGGTTGTGAT+TGG | - | chr4.1:5959641-5959660 | None:intergenic | 35.0% | |
| AGAAAGACAGAGAATTGCAA+TGG | + | chr4.1:5959301-5959320 | MS.gene070327:CDS | 35.0% | |
| AGAAGTCAAAAAGGCGATAA+AGG | + | chr4.1:5960743-5960762 | MS.gene070327:CDS | 35.0% | |
| CAAAGCTTCCTCATAATCAA+TGG | - | chr4.1:5961141-5961160 | None:intergenic | 35.0% | |
| CATTCTATGTCAGTACCAAA+TGG | + | chr4.1:5961679-5961698 | MS.gene070327:CDS | 35.0% | |
| CTATTTGTTCCAGGAAACAA+AGG | - | chr4.1:5962131-5962150 | None:intergenic | 35.0% | |
| CTTAGTTCATGGTTGTGATT+GGG | - | chr4.1:5959640-5959659 | None:intergenic | 35.0% | |
| GAGATGTATTTCCGAATTCA+AGG | + | chr4.1:5960253-5960272 | MS.gene070327:intron | 35.0% | |
| GAGTTTACCTTTACAGATGA+TGG | + | chr4.1:5959937-5959956 | MS.gene070327:CDS | 35.0% | |
| GCGATTACTTTGCAATAAAG+AGG | + | chr4.1:5959486-5959505 | MS.gene070327:CDS | 35.0% | |
| GGATAAAGAAGAAGATGAGA+AGG | + | chr4.1:5961427-5961446 | MS.gene070327:intron | 35.0% | |
| GGTATTAAACGTAAGAGAGA+TGG | + | chr4.1:5961727-5961746 | MS.gene070327:CDS | 35.0% | |
| GTAAGAACCTGTCATATACT+AGG | + | chr4.1:5959748-5959767 | MS.gene070327:CDS | 35.0% | |
| TCAACATCATGTCTACCATT+TGG | - | chr4.1:5961697-5961716 | None:intergenic | 35.0% | |
| TCGGATAAACAGATTGTTAG+TGG | + | chr4.1:5959709-5959728 | MS.gene070327:CDS | 35.0% | |
| TCTCGATAATGATACTGTAG+AGG | + | chr4.1:5959237-5959256 | MS.gene070327:CDS | 35.0% | |
| TGATGTCACATTTGTAGATG+AGG | + | chr4.1:5961391-5961410 | MS.gene070327:intron | 35.0% | |
| TGTCATGAAGTATGAGAACA+TGG | + | chr4.1:5960944-5960963 | MS.gene070327:CDS | 35.0% | |
| TTCCTCATTATGACCTTCTT+TGG | - | chr4.1:5961045-5961064 | None:intergenic | 35.0% | |
| TTCTAACTCCACACACAAAA+TGG | - | chr4.1:5960500-5960519 | None:intergenic | 35.0% | |
| ! | AACAACATTCCTTTGTTTCC+TGG | + | chr4.1:5962119-5962138 | MS.gene070327:CDS | 35.0% |
| ! | AAGCCGCTTGTAATTTTTAC+AGG | + | chr4.1:5960066-5960085 | MS.gene070327:intron | 35.0% |
| ! | AGAGTCTTGTGTTGAAAAAC+CGG | - | chr4.1:5961761-5961780 | None:intergenic | 35.0% |
| ! | CATTGATTATGAGGAAGCTT+TGG | + | chr4.1:5961139-5961158 | MS.gene070327:CDS | 35.0% |
| ! | GATTTTCATGTCCTCCTTTT+TGG | - | chr4.1:5959786-5959805 | None:intergenic | 35.0% |
| ! | GTTGAACTCTTCTAAGAATC+TGG | - | chr4.1:5960334-5960353 | None:intergenic | 35.0% |
| ! | TTACCTTTACAGATGATGGT+CGG | + | chr4.1:5959941-5959960 | MS.gene070327:CDS | 35.0% |
| !! | ATTATGAGGAAGCTTTGGAA+GGG | + | chr4.1:5961144-5961163 | MS.gene070327:CDS | 35.0% |
| !! | CATTTGGTACTGACATAGAA+TGG | - | chr4.1:5961681-5961700 | None:intergenic | 35.0% |
| !! | CCTCATTGATTTATCTCCAT+CGG | - | chr4.1:5960223-5960242 | None:intergenic | 35.0% |
| !! | TTTTTCAACACAAGACTCTG+CGG | + | chr4.1:5961762-5961781 | MS.gene070327:CDS | 35.0% |
| !!! | TTATCGCCTTTTTGACTTCT+AGG | - | chr4.1:5960743-5960762 | None:intergenic | 35.0% |
| !!! | TTATGAATGTTTTGGCGATG+TGG | + | chr4.1:5960005-5960024 | MS.gene070327:intron | 35.0% |
| !!! | TTTTTGGGTTCATCATGACA+AGG | + | chr4.1:5960851-5960870 | MS.gene070327:CDS | 35.0% |
| AACTTCTTCACAATTCCCTC+CGG | + | chr4.1:5962073-5962092 | MS.gene070327:CDS | 40.0% | |
| AAGGAAGGATGATGTGGTAA+AGG | + | chr4.1:5959438-5959457 | MS.gene070327:CDS | 40.0% | |
| ACAAAGCCTATTGAATGCAG+CGG | - | chr4.1:5961099-5961118 | None:intergenic | 40.0% | |
| ACTACACTGATCATCAAGGA+AGG | + | chr4.1:5959833-5959852 | MS.gene070327:CDS | 40.0% | |
| AGAACGACATCGATATGTGA+AGG | + | chr4.1:5960516-5960535 | MS.gene070327:intron | 40.0% | |
| AGAAGATGAGAAGGAGAAAG+AGG | + | chr4.1:5961436-5961455 | MS.gene070327:intron | 40.0% | |
| ATGCTGAGTTGCTTCACTAT+AGG | - | chr4.1:5959218-5959237 | None:intergenic | 40.0% | |
| CAAAAATGGTCGTTTCACCA+TGG | - | chr4.1:5960101-5960120 | None:intergenic | 40.0% | |
| CAAGATAAATGTACGTCGTG+AGG | + | chr4.1:5961184-5961203 | MS.gene070327:CDS | 40.0% | |
| CAAGGAAGGGTTAGAATTGA+AGG | + | chr4.1:5959847-5959866 | MS.gene070327:CDS | 40.0% | |
| CACTCAGACTCAAATTGTTC+AGG | - | chr4.1:5960381-5960400 | None:intergenic | 40.0% | |
| CCAGATAATGCTAAACCCAA+AGG | + | chr4.1:5961254-5961273 | MS.gene070327:CDS | 40.0% | |
| CCGATGGAGATAAATCAATG+AGG | + | chr4.1:5960220-5960239 | MS.gene070327:intron | 40.0% | |
| CTACACTGATCATCAAGGAA+GGG | + | chr4.1:5959834-5959853 | MS.gene070327:CDS | 40.0% | |
| CTCATTATGACCTTCTTTGG+AGG | - | chr4.1:5961042-5961061 | None:intergenic | 40.0% | |
| CTCCAAAGAAGGTCATAATG+AGG | + | chr4.1:5961040-5961059 | MS.gene070327:CDS | 40.0% | |
| CTGAACAATTTGAGTCTGAG+TGG | + | chr4.1:5960379-5960398 | MS.gene070327:intron | 40.0% | |
| GAAGTTAATCCACCCACATT+TGG | - | chr4.1:5962059-5962078 | None:intergenic | 40.0% | |
| GACGTTGTTCTCGTTGTAAA+AGG | + | chr4.1:5961327-5961346 | MS.gene070327:intron | 40.0% | |
| GATGTAGATGCCATGAACAA+AGG | - | chr4.1:5960284-5960303 | None:intergenic | 40.0% | |
| GATTTGGAGGACTTAGTTCA+TGG | - | chr4.1:5959651-5959670 | None:intergenic | 40.0% | |
| GGGTTTCATCATTCATGTCA+TGG | - | chr4.1:5961660-5961679 | None:intergenic | 40.0% | |
| TAACCGACCATCATCTGTAA+AGG | - | chr4.1:5959947-5959966 | None:intergenic | 40.0% | |
| TCATCATTTGCCTCCAAAGA+AGG | + | chr4.1:5961029-5961048 | MS.gene070327:CDS | 40.0% | |
| TGTCACATTTGTAGATGAGG+AGG | + | chr4.1:5961394-5961413 | MS.gene070327:intron | 40.0% | |
| TGTTCTCGTTGTAAAAGGCA+TGG | + | chr4.1:5961332-5961351 | MS.gene070327:intron | 40.0% | |
| TTCCATCTTGCAAATCCATG+TGG | - | chr4.1:5961978-5961997 | None:intergenic | 40.0% | |
| TTGTAGAATGGTATGCCACA+TGG | + | chr4.1:5961960-5961979 | MS.gene070327:intron | 40.0% | |
| TTTACAGGATTCAACCACCA+TGG | + | chr4.1:5960081-5960100 | MS.gene070327:intron | 40.0% | |
| ! | ATTTGGAGTCACAGAAGCAT+CGG | - | chr4.1:5961824-5961843 | None:intergenic | 40.0% |
| ! | CCTTTGGGTTTAGCATTATC+TGG | - | chr4.1:5961257-5961276 | None:intergenic | 40.0% |
| ! | GGTTTCTTAATGGGCCAAAA+AGG | + | chr4.1:5959769-5959788 | MS.gene070327:CDS | 40.0% |
| ! | GTTAGTGGTTTGCATTCTCA+AGG | + | chr4.1:5959724-5959743 | MS.gene070327:CDS | 40.0% |
| ! | TGCATTCAATAGGCTTTGTG+AGG | + | chr4.1:5961100-5961119 | MS.gene070327:CDS | 40.0% |
| ! | TTCTTAATGGGCCAAAAAGG+AGG | + | chr4.1:5959772-5959791 | MS.gene070327:CDS | 40.0% |
| !! | AGAAAGTGTCCAATACTTGC+TGG | + | chr4.1:5961365-5961384 | MS.gene070327:intron | 40.0% |
| !! | GATTATGAGGAAGCTTTGGA+AGG | + | chr4.1:5961143-5961162 | MS.gene070327:CDS | 40.0% |
| !! | TTCATTTTAGGGGCTCCTTT+GGG | - | chr4.1:5961272-5961291 | None:intergenic | 40.0% |
| !! | TTTCATTTTAGGGGCTCCTT+TGG | - | chr4.1:5961273-5961292 | None:intergenic | 40.0% |
| AAAGCGTATGCTCGTTTCCA+TGG | + | chr4.1:5959406-5959425 | MS.gene070327:CDS | 45.0% | |
| AAATGGTCGTTTCACCATGG+TGG | - | chr4.1:5960098-5960117 | None:intergenic | 45.0% | |
| AAGAGAGATGGTGACAAAGC+CGG | + | chr4.1:5961739-5961758 | MS.gene070327:CDS | 45.0% | |
| AAGCGTATGCTCGTTTCCAT+GGG | + | chr4.1:5959407-5959426 | MS.gene070327:CDS | 45.0% | |
| AATAGGCAAACCATGCGAAC+TGG | + | chr4.1:5959547-5959566 | MS.gene070327:CDS | 45.0% | |
| ACAGTTTACGAGCGTGTTGA+AGG | + | chr4.1:5962238-5962257 | MS.gene070327:intron | 45.0% | |
| ACGAGGGAAAAATTGTTGCG+CGG | + | chr4.1:5959464-5959483 | MS.gene070327:CDS | 45.0% | |
| AGAGGATGAGAAGGAATACG+AGG | + | chr4.1:5961454-5961473 | MS.gene070327:intron | 45.0% | |
| AGCTATGGAGTTTAGCACAG+AGG | + | chr4.1:5959363-5959382 | MS.gene070327:CDS | 45.0% | |
| ATTTGTAGATGAGGAGGAGG+AGG | + | chr4.1:5961400-5961419 | MS.gene070327:intron | 45.0% | |
| CAAAGGCGATGCCTTGAATT+CGG | - | chr4.1:5960267-5960286 | None:intergenic | 45.0% | |
| CAAGATGGAACCATGGTGTT+GGG | + | chr4.1:5961988-5962007 | MS.gene070327:CDS | 45.0% | |
| CACATTTGTAGATGAGGAGG+AGG | + | chr4.1:5961397-5961416 | MS.gene070327:intron | 45.0% | |
| CACTATTTCCAACCTCAGCA+TGG | - | chr4.1:5960794-5960813 | None:intergenic | 45.0% | |
| CACTTACCGCTGCATTCAAT+AGG | + | chr4.1:5961090-5961109 | MS.gene070327:CDS | 45.0% | |
| CCAAAAGCGATTGTTACCGA+TGG | + | chr4.1:5960204-5960223 | MS.gene070327:intron | 45.0% | |
| CCCAAAAAGCTGCATCTTTC+CGG | - | chr4.1:5960839-5960858 | None:intergenic | 45.0% | |
| GAAGGAGAAAGAGGATGAGA+AGG | + | chr4.1:5961445-5961464 | MS.gene070327:intron | 45.0% | |
| GATGTGGTAAAGGATCACGA+GGG | + | chr4.1:5959448-5959467 | MS.gene070327:CDS | 45.0% | |
| GGAAGGGTTAGAATTGAAGG+TGG | + | chr4.1:5959850-5959869 | MS.gene070327:CDS | 45.0% | |
| GGATTTGCAAGATGGAACCA+TGG | + | chr4.1:5961981-5962000 | MS.gene070327:CDS | 45.0% | |
| GTTTCCATGGGTTTGTCGTA+AGG | + | chr4.1:5959419-5959438 | MS.gene070327:CDS | 45.0% | |
| TACCAACATACCCAACACCA+TGG | - | chr4.1:5962001-5962020 | None:intergenic | 45.0% | |
| TACGGTGGGATTCCAAATGT+GGG | + | chr4.1:5962044-5962063 | MS.gene070327:CDS | 45.0% | |
| TGATGTGGTAAAGGATCACG+AGG | + | chr4.1:5959447-5959466 | MS.gene070327:CDS | 45.0% | |
| TGCCACATGGATTTGCAAGA+TGG | + | chr4.1:5961973-5961992 | MS.gene070327:CDS | 45.0% | |
| TGTCATGGCTTATAGACACC+TGG | - | chr4.1:5961645-5961664 | None:intergenic | 45.0% | |
| TGTCGTAAGGAAGGATGATG+TGG | + | chr4.1:5959432-5959451 | MS.gene070327:CDS | 45.0% | |
| ! | AACCATGGTGTTGGGTATGT+TGG | + | chr4.1:5961996-5962015 | MS.gene070327:CDS | 45.0% |
| ! | ACCGGAAAGATGCAGCTTTT+TGG | + | chr4.1:5960835-5960854 | MS.gene070327:CDS | 45.0% |
| ! | ATGCGAGACCATTTTGTGTG+TGG | + | chr4.1:5960489-5960508 | MS.gene070327:intron | 45.0% |
| ! | CCATCGGTAACAATCGCTTT+TGG | - | chr4.1:5960207-5960226 | None:intergenic | 45.0% |
| ! | CCGGAAAGATGCAGCTTTTT+GGG | + | chr4.1:5960836-5960855 | MS.gene070327:CDS | 45.0% |
| !! | TTTCCCGCTTTTCCTGTGTA+CGG | + | chr4.1:5962026-5962045 | MS.gene070327:CDS | 45.0% |
| AAATGGTCATGTTCCGCCGA+TGG | + | chr4.1:5961066-5961085 | MS.gene070327:CDS | 50.0% | |
| AATGGTCATGTTCCGCCGAT+GGG | + | chr4.1:5961067-5961086 | MS.gene070327:CDS | 50.0% | |
| AGATGAGGAGGAGGAGGAAA+AGG | + | chr4.1:5961406-5961425 | MS.gene070327:intron | 50.0% | |
| AGCAAGACATCCAGTTCGCA+TGG | - | chr4.1:5959560-5959579 | None:intergenic | 50.0% | |
| ATCTGTCACTCACCATGCTG+AGG | + | chr4.1:5960779-5960798 | MS.gene070327:CDS | 50.0% | |
| CCATGGGTTTGTCGTAAGGA+AGG | + | chr4.1:5959423-5959442 | MS.gene070327:CDS | 50.0% | |
| CCTTCCTTACGACAAACCCA+TGG | - | chr4.1:5959426-5959445 | None:intergenic | 50.0% | |
| CGTCGTGAGGGAAATGTCAA+TGG | + | chr4.1:5961197-5961216 | MS.gene070327:CDS | 50.0% | |
| GAAGCTTCACGCTCAAATCC+AGG | - | chr4.1:5960696-5960715 | None:intergenic | 50.0% | |
| GCAAGATGGAACCATGGTGT+TGG | + | chr4.1:5961987-5962006 | MS.gene070327:CDS | 50.0% | |
| GGATGAGAAGGAATACGAGG+AGG | + | chr4.1:5961457-5961476 | MS.gene070327:intron | 50.0% | |
| GGCAAGGAAGTTGTCAACAC+AGG | - | chr4.1:5960675-5960694 | None:intergenic | 50.0% | |
| GTACGGTGGGATTCCAAATG+TGG | + | chr4.1:5962043-5962062 | MS.gene070327:CDS | 50.0% | |
| TACGAGCGTGTTGAAGGACA+TGG | + | chr4.1:5962244-5962263 | MS.gene070327:CDS | 50.0% | |
| TTCACGCTCAAATCCAGGCA+AGG | - | chr4.1:5960691-5960710 | None:intergenic | 50.0% | |
| TTTGGGCAGATTCTGCAAGC+AGG | + | chr4.1:5959977-5959996 | MS.gene070327:intron | 50.0% | |
| ! | GTGTTGACAACTTCCTTGCC+TGG | + | chr4.1:5960675-5960694 | MS.gene070327:CDS | 50.0% |
| ! | TGTGATGGAAGGATGTCTGC+CGG | - | chr4.1:5962095-5962114 | None:intergenic | 50.0% |
| ! | TTTGGAATCCCACCGTACAC+AGG | - | chr4.1:5962041-5962060 | None:intergenic | 50.0% |
| !! | CAAGGCATCGCCTTTGTTCA+TGG | + | chr4.1:5960271-5960290 | MS.gene070327:intron | 50.0% |
| ATGCAGCGGTAAGTGCCCAT+CGG | - | chr4.1:5961085-5961104 | None:intergenic | 55.0% | |
| ATGGAAGGATGTCTGCCGGA+GGG | - | chr4.1:5962091-5962110 | None:intergenic | 55.0% | |
| CAAAGATGCAGAGGAGGAGG+TGG | + | chr4.1:5961481-5961500 | MS.gene070327:intron | 55.0% | |
| CCACCGTACACAGGAAAAGC+GGG | - | chr4.1:5962032-5962051 | None:intergenic | 55.0% | |
| CCCACCGTACACAGGAAAAG+CGG | - | chr4.1:5962033-5962052 | None:intergenic | 55.0% | |
| CGAGGAGGACAAAGATGCAG+AGG | + | chr4.1:5961472-5961491 | MS.gene070327:intron | 55.0% | |
| GGACAAAGATGCAGAGGAGG+AGG | + | chr4.1:5961478-5961497 | MS.gene070327:intron | 55.0% | |
| GGAGGACAAAGATGCAGAGG+AGG | + | chr4.1:5961475-5961494 | MS.gene070327:intron | 55.0% | |
| GGTGGGATTCCAAATGTGGG+TGG | + | chr4.1:5962047-5962066 | MS.gene070327:CDS | 55.0% | |
| GTCACTCACCATGCTGAGGT+TGG | + | chr4.1:5960783-5960802 | MS.gene070327:CDS | 55.0% | |
| !! | CCGCTTTTCCTGTGTACGGT+GGG | + | chr4.1:5962030-5962049 | MS.gene070327:CDS | 55.0% |
| AGATGCAGAGGAGGAGGTGG+AGG | + | chr4.1:5961484-5961503 | MS.gene070327:intron | 60.0% | |
| GATGGAAGGATGTCTGCCGG+AGG | - | chr4.1:5962092-5962111 | None:intergenic | 60.0% | |
| !! | CCCGCTTTTCCTGTGTACGG+TGG | + | chr4.1:5962029-5962048 | MS.gene070327:CDS | 60.0% |
| AGAGGAGGAGGTGGAGGAGG+AGG | + | chr4.1:5961490-5961509 | MS.gene070327:intron | 65.0% | |
| CAGCGGTAAGTGCCCATCGG+CGG | - | chr4.1:5961082-5961101 | None:intergenic | 65.0% | |
| TGCAGAGGAGGAGGTGGAGG+AGG | + | chr4.1:5961487-5961506 | MS.gene070327:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 5959208 | 5962304 | 5959208 | ID=MS.gene070327 |
| chr4.1 | mRNA | 5959208 | 5962304 | 5959208 | ID=MS.gene070327.t1;Parent=MS.gene070327 |
| chr4.1 | exon | 5959208 | 5959962 | 5959208 | ID=MS.gene070327.t1.exon1;Parent=MS.gene070327.t1 |
| chr4.1 | CDS | 5959208 | 5959962 | 5959208 | ID=cds.MS.gene070327.t1;Parent=MS.gene070327.t1 |
| chr4.1 | exon | 5960611 | 5961316 | 5960611 | ID=MS.gene070327.t1.exon2;Parent=MS.gene070327.t1 |
| chr4.1 | CDS | 5960611 | 5961316 | 5960611 | ID=cds.MS.gene070327.t1;Parent=MS.gene070327.t1 |
| chr4.1 | exon | 5961646 | 5961864 | 5961646 | ID=MS.gene070327.t1.exon3;Parent=MS.gene070327.t1 |
| chr4.1 | CDS | 5961646 | 5961864 | 5961646 | ID=cds.MS.gene070327.t1;Parent=MS.gene070327.t1 |
| chr4.1 | exon | 5961966 | 5962151 | 5961966 | ID=MS.gene070327.t1.exon4;Parent=MS.gene070327.t1 |
| chr4.1 | CDS | 5961966 | 5962151 | 5961966 | ID=cds.MS.gene070327.t1;Parent=MS.gene070327.t1 |
| chr4.1 | exon | 5962242 | 5962304 | 5962242 | ID=MS.gene070327.t1.exon5;Parent=MS.gene070327.t1 |
| chr4.1 | CDS | 5962242 | 5962304 | 5962242 | ID=cds.MS.gene070327.t1;Parent=MS.gene070327.t1 |
| Gene Sequence |
| Protein sequence |
