AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene070375

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene070375.t1 MTR_2g064090 96.254 347 12 1 1 347 1 346 0.0 700
MS.gene070375.t1 MTR_3g064580 74.405 168 43 0 1 168 1 168 6.45e-88 278
MS.gene070375.t1 MTR_5g076850 67.368 190 60 2 1 189 1 189 1.24e-86 274
MS.gene070375.t1 MTR_6g477900 72.152 158 43 1 1 158 1 157 2.69e-83 253
MS.gene070375.t1 MTR_5g014300 50.711 211 85 3 1 204 1 199 1.35e-67 216
MS.gene070375.t1 MTR_4g098630 60.000 160 60 2 1 157 1 159 1.84e-63 204
MS.gene070375.t1 MTR_4g101680 54.217 166 72 2 6 170 7 169 8.03e-62 202
MS.gene070375.t1 MTR_2g079990 55.696 158 67 2 1 158 11 165 1.05e-60 198
MS.gene070375.t1 MTR_8g059170 53.757 173 73 3 1 168 9 179 4.05e-60 196
MS.gene070375.t1 MTR_8g076110 51.176 170 75 3 1 167 1 165 4.66e-60 196
MS.gene070375.t1 MTR_1g090723 54.190 179 78 3 8 185 10 185 7.67e-60 202
MS.gene070375.t1 MTR_1g090723 54.190 179 78 3 8 185 10 185 8.22e-60 203
MS.gene070375.t1 MTR_1g090723 55.307 179 77 3 8 185 10 186 8.90e-60 203
MS.gene070375.t1 MTR_4g036030 54.839 155 66 2 6 159 7 158 1.09e-59 196
MS.gene070375.t1 MTR_1g096430 58.170 153 60 2 6 157 7 156 1.87e-59 195
MS.gene070375.t1 MTR_4g081870 55.975 159 65 3 2 157 5 161 2.32e-59 192
MS.gene070375.t1 MTR_0036s0150 53.889 180 79 3 8 186 7 183 2.83e-59 199
MS.gene070375.t1 MTR_1g097300 47.137 227 110 5 4 229 17 234 4.91e-59 200
MS.gene070375.t1 MTR_7g085220 53.939 165 62 4 6 158 8 170 1.19e-58 193
MS.gene070375.t1 MTR_1g090720 57.862 159 62 1 5 158 41 199 1.62e-58 196
MS.gene070375.t1 MTR_5g021710 55.556 153 64 2 6 157 8 157 1.76e-58 192
MS.gene070375.t1 MTR_4g035590 54.902 153 64 2 6 157 8 156 3.16e-58 192
MS.gene070375.t1 MTR_5g041940 56.051 157 64 3 4 157 1 155 3.79e-58 189
MS.gene070375.t1 MTR_2g080010 51.099 182 73 5 6 173 15 194 4.84e-58 192
MS.gene070375.t1 MTR_8g094580 40.580 276 123 8 4 265 5 253 1.09e-57 189
MS.gene070375.t1 MTR_6g012670 56.774 155 62 3 6 158 20 171 1.67e-57 189
MS.gene070375.t1 MTR_5g012080 55.128 156 66 3 6 159 7 160 2.32e-57 190
MS.gene070375.t1 MTR_3g096920 55.000 160 67 3 4 161 5 161 2.47e-57 188
MS.gene070375.t1 MTR_2g062730 53.205 156 68 3 4 157 8 160 4.53e-57 189
MS.gene070375.t1 MTR_5g069030 52.105 190 78 3 6 188 25 208 4.84e-57 196
MS.gene070375.t1 MTR_6g084430 57.143 154 61 2 6 159 5 153 5.33e-57 188
MS.gene070375.t1 MTR_2g078700 59.615 156 58 3 6 158 23 176 7.04e-57 189
MS.gene070375.t1 MTR_3g088110 46.121 232 107 7 4 225 5 228 7.10e-57 186
MS.gene070375.t1 MTR_2g064470 56.098 164 68 2 1 164 6 165 1.33e-56 186
MS.gene070375.t1 MTR_3g096140 55.333 150 66 1 8 157 9 157 1.39e-56 186
MS.gene070375.t1 MTR_8g063550 54.777 157 70 1 1 157 1 156 1.47e-56 187
MS.gene070375.t1 MTR_4g108760 55.000 160 61 3 4 158 15 168 2.49e-56 187
MS.gene070375.t1 MTR_8g063550 54.777 157 70 1 1 157 1 156 2.90e-56 189
MS.gene070375.t1 MTR_2g079990 58.824 136 54 1 1 136 11 144 2.91e-56 188
MS.gene070375.t1 MTR_8g063550 54.777 157 70 1 1 157 1 156 3.31e-56 189
MS.gene070375.t1 MTR_3g093040 52.761 163 66 2 1 158 103 259 4.38e-56 185
MS.gene070375.t1 MTR_3g093050 57.233 159 57 2 5 158 21 173 4.78e-56 192
MS.gene070375.t1 MTR_2157s0010 52.000 175 71 4 6 169 8 180 5.33e-56 184
MS.gene070375.t1 MTR_3g435150 56.051 157 66 2 4 159 14 168 6.42e-56 184
MS.gene070375.t1 MTR_3g093050 57.233 159 57 2 5 158 21 173 6.69e-56 192
MS.gene070375.t1 MTR_3g096140 55.333 150 66 1 8 157 9 157 8.14e-56 186
MS.gene070375.t1 MTR_6g011860 53.704 162 64 4 6 158 15 174 1.26e-54 184
MS.gene070375.t1 MTR_7g005280 54.023 174 69 5 4 175 13 177 2.40e-54 179
MS.gene070375.t1 MTR_6g032770 42.400 250 125 8 3 247 15 250 2.56e-54 182
MS.gene070375.t1 MTR_4g089135 49.153 177 64 4 6 158 15 189 2.97e-54 181
MS.gene070375.t1 MTR_8g024480 48.503 167 77 3 6 163 15 181 3.11e-54 184
MS.gene070375.t1 MTR_3g109340 55.769 156 62 3 5 158 21 171 6.83e-54 181
MS.gene070375.t1 MTR_1g008740 57.595 158 58 6 5 158 26 178 1.14e-53 181
MS.gene070375.t1 MTR_1g008740 57.595 158 58 6 5 158 12 164 1.17e-53 180
MS.gene070375.t1 MTR_8g093580 52.229 157 74 1 1 157 1 156 1.93e-53 183
MS.gene070375.t1 MTR_3g096920 61.538 130 47 2 4 133 5 131 6.09e-53 177
MS.gene070375.t1 MTR_2g093810 49.711 173 74 5 5 170 13 179 6.71e-53 177
MS.gene070375.t1 MTR_3g109340 55.414 157 62 4 5 158 21 172 4.02e-52 176
MS.gene070375.t1 MTR_1g069805 54.194 155 62 3 5 157 9 156 1.23e-51 172
MS.gene070375.t1 MTR_8g467490 50.311 161 68 4 8 158 16 174 2.45e-51 175
MS.gene070375.t1 MTR_7g085260 50.920 163 73 3 4 161 15 175 2.60e-51 175
MS.gene070375.t1 MTR_7g097090 54.902 153 60 3 5 155 9 154 4.37e-51 172
MS.gene070375.t1 MTR_5g040420 50.625 160 68 4 8 158 16 173 9.41e-51 174
MS.gene070375.t1 MTR_3g116070 56.494 154 60 4 6 154 23 174 2.01e-50 172
MS.gene070375.t1 MTR_2g086880 51.899 158 67 2 1 158 13 161 2.69e-50 175
MS.gene070375.t1 MTR_2g086880 51.899 158 67 2 1 158 13 161 3.65e-50 176
MS.gene070375.t1 MTR_4g134460 51.974 152 67 3 8 158 56 202 5.93e-50 172
MS.gene070375.t1 MTR_3g070030 51.875 160 65 3 4 157 17 170 6.28e-50 171
MS.gene070375.t1 MTR_7g100990 49.057 159 74 3 4 157 9 165 7.50e-49 167
MS.gene070375.t1 MTR_7g011130 57.778 135 51 2 9 143 22 150 1.45e-47 164
MS.gene070375.t1 MTR_3g096140 52.206 136 64 1 22 157 2 136 5.03e-46 160
MS.gene070375.t1 MTR_2g068880 46.988 166 73 4 8 159 24 188 6.30e-46 159
MS.gene070375.t1 MTR_2g068920 46.243 173 74 5 8 162 23 194 2.62e-45 157
MS.gene070375.t1 MTR_7g011120 53.571 140 59 2 4 143 6 139 4.94e-44 154
MS.gene070375.t1 MTR_4g075980 43.275 171 83 4 8 172 17 179 9.83e-44 153
MS.gene070375.t1 MTR_8g023840 49.342 152 67 4 6 154 11 155 7.35e-43 153
MS.gene070375.t1 MTR_3g070040 49.669 151 68 3 10 157 12 157 7.26e-42 149
MS.gene070375.t1 MTR_5g090970 44.720 161 76 3 8 157 20 178 1.43e-41 147
MS.gene070375.t1 MTR_5g090970 43.478 161 77 3 8 157 20 177 2.55e-40 144
MS.gene070375.t1 MTR_8g023860 47.368 152 70 4 6 154 12 156 1.56e-39 144
MS.gene070375.t1 MTR_8g023930 43.713 167 80 5 6 169 24 179 1.59e-38 143
MS.gene070375.t1 MTR_8g023900 46.497 157 74 5 6 158 12 162 4.57e-38 142
MS.gene070375.t1 MTR_8g023900 43.503 177 80 7 1 169 184 348 5.94e-37 139
MS.gene070375.t1 MTR_4g052620 44.872 156 80 5 6 155 5 160 2.34e-37 135
MS.gene070375.t1 MTR_8g099750 43.226 155 78 3 6 154 14 164 1.16e-36 132
MS.gene070375.t1 MTR_3g098810 43.210 162 77 4 6 157 14 170 1.74e-35 129
MS.gene070375.t1 MTR_8g094580 36.404 228 100 8 63 276 8 204 7.87e-35 127
MS.gene070375.t1 MTR_3g098810 46.617 133 63 2 6 134 14 142 2.57e-34 124
MS.gene070375.t1 MTR_2g086690 42.405 158 80 6 7 155 5 160 8.89e-34 125
MS.gene070375.t1 MTR_7g105170 40.854 164 86 6 5 158 3 165 2.85e-33 124
MS.gene070375.t1 MTR_8g023880 39.412 170 75 6 5 157 6 164 3.28e-31 119
MS.gene070375.t1 MTR_4g094302 40.881 159 77 4 6 157 11 159 4.23e-30 114
MS.gene070375.t1 MTR_4g094302 44.615 130 60 3 6 133 11 130 6.70e-30 112
MS.gene070375.t1 MTR_7g070140 47.059 102 44 2 56 147 12 113 7.84e-24 95.5
MS.gene070375.t1 MTR_7g083330 33.758 157 97 4 4 159 16 166 7.80e-22 92.0
MS.gene070375.t1 MTR_8g093790 35.897 156 77 7 2 157 6 138 1.54e-19 85.5
MS.gene070375.t1 MTR_7g083360 31.013 158 97 4 2 156 6 154 2.59e-18 81.3
MS.gene070375.t1 MTR_7g083370 31.579 133 87 3 6 137 10 139 2.17e-17 78.2
MS.gene070375.t1 MTR_3g096400 27.439 164 100 4 4 156 5 160 9.27e-16 75.5
MS.gene070375.t1 MTR_7g070150 54.098 61 23 2 98 157 1 57 1.53e-15 71.6
MS.gene070375.t1 MTR_1g087190 63.043 46 16 1 8 52 7 52 7.40e-14 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene070375.t1 AT1G54330 50.298 336 120 8 1 333 1 292 4.18e-97 290
MS.gene070375.t1 AT3G17730 77.707 157 34 1 1 157 1 156 1.43e-87 264
MS.gene070375.t1 AT3G03200 73.585 159 42 0 1 159 1 159 1.51e-86 269
MS.gene070375.t1 AT5G17260 72.956 159 43 0 1 159 1 159 9.73e-86 267
MS.gene070375.t1 AT1G65910 71.023 176 47 2 1 176 1 172 9.74e-86 271
MS.gene070375.t1 AT5G46590 57.229 166 69 2 1 164 1 166 4.80e-67 213
MS.gene070375.t1 AT4G17980 60.248 161 59 3 1 157 1 160 8.47e-67 211
MS.gene070375.t1 AT4G17980 60.248 161 59 3 1 157 1 160 1.19e-66 212
MS.gene070375.t1 AT3G10480 47.556 225 108 4 1 216 22 245 4.28e-65 213
MS.gene070375.t1 AT3G10490 56.571 175 70 2 5 173 26 200 6.81e-65 206
MS.gene070375.t1 AT3G10490 46.983 232 111 5 5 225 26 256 2.16e-64 211
MS.gene070375.t1 AT3G10480 47.556 225 107 5 1 216 22 244 7.48e-64 209
MS.gene070375.t1 AT5G46590 59.459 148 59 1 1 147 1 148 3.87e-63 202
MS.gene070375.t1 AT4G27410 57.595 158 64 2 1 158 9 163 6.91e-63 202
MS.gene070375.t1 AT3G10500 59.146 164 65 2 5 168 8 169 2.26e-62 208
MS.gene070375.t1 AT1G32510 55.758 165 66 1 1 158 1 165 5.39e-62 199
MS.gene070375.t1 AT5G04410 59.146 164 65 2 5 168 8 169 1.12e-61 207
MS.gene070375.t1 AT5G66300 54.268 164 72 2 5 167 11 172 1.21e-61 199
MS.gene070375.t1 AT3G15500 57.595 158 62 3 1 157 9 162 4.61e-60 196
MS.gene070375.t1 AT3G10480 48.744 199 68 2 1 165 22 220 1.91e-59 200
MS.gene070375.t1 AT4G27410 52.601 173 66 3 1 158 9 180 3.43e-59 193
MS.gene070375.t1 AT2G18060 53.216 171 73 4 1 167 1 168 6.46e-59 194
MS.gene070375.t1 AT2G18060 53.216 171 73 4 1 167 1 168 6.46e-59 194
MS.gene070375.t1 AT1G52890 56.329 158 64 3 1 157 9 162 1.00e-58 192
MS.gene070375.t1 AT1G71930 56.051 157 63 3 5 159 8 160 1.44e-58 192
MS.gene070375.t1 AT1G71930 56.051 157 63 3 5 159 8 160 1.44e-58 192
MS.gene070375.t1 AT4G10350 57.143 154 62 3 6 157 9 160 1.89e-58 192
MS.gene070375.t1 AT1G33280 49.711 173 82 2 6 177 8 176 5.73e-58 190
MS.gene070375.t1 AT3G04070 48.108 185 75 5 5 170 9 191 7.51e-58 191
MS.gene070375.t1 AT4G35580 57.595 158 56 2 5 157 8 159 1.67e-57 195
MS.gene070375.t1 AT4G35580 57.595 158 56 2 5 157 8 159 1.86e-57 195
MS.gene070375.t1 AT4G35580 57.595 158 56 2 5 157 8 159 1.93e-57 194
MS.gene070375.t1 AT1G62700 54.194 155 67 2 6 159 7 158 2.04e-57 191
MS.gene070375.t1 AT1G62700 54.194 155 67 2 6 159 7 158 2.04e-57 191
MS.gene070375.t1 AT1G69490 55.769 156 64 2 5 157 8 161 2.26e-57 187
MS.gene070375.t1 AT1G12260 52.258 155 70 2 6 159 7 158 2.69e-57 189
MS.gene070375.t1 AT4G36160 55.195 154 65 3 5 157 9 159 4.18e-57 190
MS.gene070375.t1 AT4G36160 55.195 154 65 3 5 157 9 159 4.18e-57 190
MS.gene070375.t1 AT4G36160 55.195 154 65 3 5 157 13 163 4.67e-57 190
MS.gene070375.t1 AT1G12260 52.258 155 70 2 6 159 7 158 5.45e-57 190
MS.gene070375.t1 AT1G33060 56.329 158 58 2 5 157 23 174 6.85e-57 196
MS.gene070375.t1 AT1G33060 56.329 158 58 2 5 157 23 174 7.11e-57 196
MS.gene070375.t1 AT5G39610 56.604 159 58 3 4 157 18 170 1.03e-56 186
MS.gene070375.t1 AT3G18400 56.209 153 63 2 6 158 5 153 1.06e-56 187
MS.gene070375.t1 AT5G07680 56.410 156 65 2 4 158 15 168 2.17e-56 187
MS.gene070375.t1 AT5G07680 56.410 156 65 2 4 158 1 154 2.28e-56 186
MS.gene070375.t1 AT5G61430 36.474 329 170 11 4 321 14 314 2.59e-56 187
MS.gene070375.t1 AT5G08790 56.329 158 62 3 4 157 5 159 3.12e-56 185
MS.gene070375.t1 AT1G76420 58.710 155 58 3 6 158 22 172 3.98e-56 186
MS.gene070375.t1 AT2G24430 57.962 157 58 4 5 158 15 166 4.75e-56 185
MS.gene070375.t1 AT2G24430 57.962 157 58 4 5 158 15 166 4.75e-56 185
MS.gene070375.t1 AT5G53950 59.627 161 60 3 6 163 17 175 6.60e-56 187
MS.gene070375.t1 AT2G46770 42.222 225 96 5 6 217 16 219 1.12e-55 186
MS.gene070375.t1 AT3G04070 44.279 201 75 5 5 170 9 207 2.72e-55 185
MS.gene070375.t1 AT5G62380 51.235 162 75 2 6 166 7 165 2.97e-55 184
MS.gene070375.t1 AT5G62380 51.235 162 75 2 6 166 7 165 2.97e-55 184
MS.gene070375.t1 AT1G56010 55.215 163 68 3 1 160 14 174 3.16e-55 183
MS.gene070375.t1 AT3G29035 57.516 153 62 2 4 155 22 172 5.21e-55 182
MS.gene070375.t1 AT1G34180 52.795 161 74 2 8 168 18 176 8.01e-55 186
MS.gene070375.t1 AT3G15170 48.718 195 86 4 6 197 20 203 2.06e-54 181
MS.gene070375.t1 AT1G01720 56.051 157 63 4 4 157 5 158 2.29e-54 180
MS.gene070375.t1 AT1G34190 47.568 185 89 2 8 185 18 201 2.69e-54 187
MS.gene070375.t1 AT3G12977 53.165 158 72 1 1 158 13 168 3.14e-54 179
MS.gene070375.t1 AT5G63790 54.375 160 66 3 2 157 46 202 4.00e-54 180
MS.gene070375.t1 AT1G79580 51.923 156 69 3 4 157 15 166 4.63e-54 182
MS.gene070375.t1 AT1G79580 51.923 156 69 3 4 157 15 166 4.63e-54 182
MS.gene070375.t1 AT1G79580 51.923 156 69 3 4 157 15 166 4.63e-54 182
MS.gene070375.t1 AT1G79580 51.923 156 69 3 4 157 15 166 4.63e-54 182
MS.gene070375.t1 AT1G79580 51.923 156 69 3 4 157 15 166 4.63e-54 182
MS.gene070375.t1 AT5G63790 54.375 160 66 3 2 157 56 212 5.52e-54 180
MS.gene070375.t1 AT1G34180 52.795 161 74 2 8 168 18 176 7.25e-54 186
MS.gene070375.t1 AT3G15510 49.180 183 72 5 10 180 21 194 7.59e-54 181
MS.gene070375.t1 AT3G49530 42.857 238 107 7 5 227 12 235 1.17e-53 182
MS.gene070375.t1 AT1G32770 49.693 163 70 3 6 157 16 177 1.26e-53 180
MS.gene070375.t1 AT3G49530 42.857 238 107 7 5 227 12 235 1.71e-53 183
MS.gene070375.t1 AT5G24590 53.165 158 72 2 1 157 8 164 1.74e-53 182
MS.gene070375.t1 AT3G61910 49.405 168 66 3 6 157 11 175 2.35e-53 179
MS.gene070375.t1 AT5G64060 51.899 158 75 1 1 158 1 157 2.50e-53 179
MS.gene070375.t1 AT5G09330 35.110 319 169 5 1 289 1 311 3.05e-53 182
MS.gene070375.t1 AT5G09330 35.110 319 169 5 1 289 1 311 3.05e-53 182
MS.gene070375.t1 AT5G09330 35.110 319 169 5 1 289 1 311 3.05e-53 182
MS.gene070375.t1 AT5G09330 35.110 319 169 5 1 289 1 311 3.05e-53 182
MS.gene070375.t1 AT5G09330 35.110 319 169 5 1 289 1 311 3.05e-53 182
MS.gene070375.t1 AT2G33480 54.545 154 64 2 4 157 13 160 4.37e-53 176
MS.gene070375.t1 AT5G18270 55.844 154 64 3 6 157 21 172 8.93e-53 177
MS.gene070375.t1 AT1G77450 52.353 170 76 4 2 169 6 172 1.19e-52 174
MS.gene070375.t1 AT1G61110 52.023 173 64 6 6 163 16 184 1.92e-52 176
MS.gene070375.t1 AT2G33480 54.545 154 62 3 4 157 13 158 2.06e-52 174
MS.gene070375.t1 AT5G18270 55.195 154 65 3 6 157 21 172 3.24e-52 176
MS.gene070375.t1 AT5G39820 45.251 179 74 3 8 164 22 198 6.53e-52 175
MS.gene070375.t1 AT1G34180 49.133 173 74 3 8 168 18 188 1.30e-51 177
MS.gene070375.t1 AT1G26870 50.920 163 68 3 6 158 16 176 9.50e-51 174
MS.gene070375.t1 AT1G34180 49.133 173 74 3 8 168 18 188 9.97e-51 177
MS.gene070375.t1 AT2G02450 51.656 151 67 3 8 157 53 198 2.24e-49 170
MS.gene070375.t1 AT2G02450 51.656 151 67 3 8 157 53 198 3.15e-49 170
MS.gene070375.t1 AT3G04060 53.896 154 67 3 6 157 20 171 5.57e-49 167
MS.gene070375.t1 AT2G27300 52.564 156 65 3 1 156 9 155 8.07e-49 167
MS.gene070375.t1 AT2G43000 50.955 157 72 2 2 158 17 168 8.72e-49 165
MS.gene070375.t1 AT3G44290 50.318 157 69 3 2 158 10 157 6.47e-48 161
MS.gene070375.t1 AT5G13180 54.487 156 62 4 4 157 12 160 1.11e-47 162
MS.gene070375.t1 AT1G32870 53.659 164 72 3 6 168 10 170 2.15e-47 168
MS.gene070375.t1 AT1G32870 53.659 164 72 3 6 168 10 170 2.46e-47 167
MS.gene070375.t1 AT3G44290 50.318 157 69 3 2 158 10 157 3.98e-47 162
MS.gene070375.t1 AT1G32870 53.659 164 72 3 6 168 46 206 3.98e-47 168
MS.gene070375.t1 AT1G52880 51.875 160 64 4 10 158 21 178 1.70e-46 160
MS.gene070375.t1 AT4G28530 50.877 171 57 6 6 157 10 172 2.29e-46 161
MS.gene070375.t1 AT5G22290 48.052 154 72 3 1 154 16 161 3.57e-46 160
MS.gene070375.t1 AT2G17040 45.223 157 75 3 8 161 8 156 5.77e-44 153
MS.gene070375.t1 AT5G04395 45.098 153 70 2 2 140 24 176 1.26e-41 144
MS.gene070375.t1 AT3G12910 45.833 168 72 5 8 159 23 187 6.01e-41 145
MS.gene070375.t1 AT1G56010 61.000 100 37 1 63 160 8 107 3.63e-36 132
MS.gene070375.t1 AT4G01520 40.385 156 82 4 4 154 2 151 1.37e-34 129
MS.gene070375.t1 AT5G61430 33.333 270 143 11 63 321 8 251 4.34e-34 127
MS.gene070375.t1 AT4G10350 57.292 96 38 2 63 157 20 113 7.38e-34 127
MS.gene070375.t1 AT3G12977 58.947 95 39 0 63 157 20 114 3.31e-33 123
MS.gene070375.t1 AT4G01540 39.735 151 80 4 9 154 7 151 8.16e-32 124
MS.gene070375.t1 AT4G01540 39.735 151 80 4 9 154 7 151 8.19e-32 124
MS.gene070375.t1 AT4G01540 39.735 151 80 4 9 154 7 151 8.25e-32 123
MS.gene070375.t1 AT4G01540 39.735 151 80 4 9 154 7 151 1.23e-31 124
MS.gene070375.t1 AT2G33480 56.842 95 40 1 63 157 10 103 1.93e-31 118
MS.gene070375.t1 AT5G22380 35.961 203 115 7 9 196 8 210 6.57e-31 117
MS.gene070375.t1 AT4G01550 40.523 153 81 3 9 157 7 153 7.77e-31 122
MS.gene070375.t1 AT3G44350 38.854 157 92 4 6 158 5 161 3.29e-30 115
MS.gene070375.t1 AT4G28530 49.231 130 46 4 6 117 10 137 3.48e-29 114
MS.gene070375.t1 AT3G04420 34.518 197 113 6 4 190 1 191 3.75e-29 114
MS.gene070375.t1 AT1G02230 38.462 156 83 6 4 154 1 148 1.17e-28 114
MS.gene070375.t1 AT3G04420 34.518 197 113 6 4 190 1 191 1.22e-28 114
MS.gene070375.t1 AT5G64530 41.667 132 61 4 4 133 1 118 1.42e-27 106
MS.gene070375.t1 AT5G64530 41.667 132 61 4 4 133 1 118 3.63e-27 106
MS.gene070375.t1 AT3G44350 36.538 156 95 4 6 157 5 160 3.03e-26 102
MS.gene070375.t1 AT3G10490 39.744 156 82 5 81 225 2 156 5.47e-26 107
MS.gene070375.t1 AT3G10490 39.744 156 82 5 81 225 2 156 5.47e-26 107
MS.gene070375.t1 AT1G02250 34.615 156 89 5 4 154 1 148 8.90e-26 106
MS.gene070375.t1 AT1G02220 35.714 154 88 4 4 155 1 145 1.25e-25 106
MS.gene070375.t1 AT1G01010 36.478 159 77 6 9 154 6 153 9.57e-23 99.0
MS.gene070375.t1 AT3G55210 35.366 164 87 6 5 155 10 167 1.32e-20 90.5
MS.gene070375.t1 AT2G43000 36.054 147 89 2 70 215 2 144 1.73e-20 88.6
MS.gene070375.t1 AT3G56530 31.169 154 100 3 4 155 50 199 4.36e-19 87.0
MS.gene070375.t1 AT2G18060 48.780 82 39 2 86 167 2 80 7.37e-19 85.5
MS.gene070375.t1 AT5G50820 31.818 176 101 6 4 173 15 177 1.95e-18 82.8
MS.gene070375.t1 AT3G04430 34.459 148 83 5 12 147 6 151 7.03e-17 78.6
MS.gene070375.t1 AT5G14000 30.201 149 94 3 4 150 13 153 6.95e-16 74.7
MS.gene070375.t1 AT5G14000 31.818 132 84 2 4 133 13 140 8.43e-15 72.8
MS.gene070375.t1 AT5G22290 50.000 68 27 2 87 154 2 62 3.15e-14 72.0

Find 74 sgRNAs with CRISPR-Local

Find 181 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGCATCACATGGAAATTT+TGG 0.149659 2.2:+26000810 None:intergenic
CTACCCCTCAAATTTATTTC+AGG 0.177248 2.2:-26000655 MS.gene070375:intron
CTATTTGTTCTTGACCCATT+TGG 0.270391 2.2:+26002339 None:intergenic
GAGAAATCTTCCATCATTAA+AGG 0.281728 2.2:+25999017 None:intergenic
GAGCAACAAGAGGTGGTTAT+TGG 0.284107 2.2:-26002317 MS.gene070375:CDS
ATTTCTTCCTAGCAAGGATA+TGG 0.291890 2.2:-26002397 MS.gene070375:CDS
TTTGGATACTTTCTATCTCT+TGG 0.302528 2.2:+26002357 None:intergenic
TGCTTCTCTCTCTTCTTTGA+AGG 0.328168 2.2:-26002145 MS.gene070375:intron
TGACTCTACCACCTGGATTC+AGG 0.329084 2.2:-26002665 MS.gene070375:CDS
AAGAGAAGTAATGCAAACTA+TGG 0.358125 2.2:-26000862 MS.gene070375:CDS
TAATGAAGAGGAACAAGTTA+AGG 0.412340 2.2:-26000958 MS.gene070375:CDS
CCCTCAAACACCTTTAATGA+TGG 0.418490 2.2:-25999027 MS.gene070375:CDS
AAGCAGTCATGAGATATATC+AGG 0.420403 2.2:+25998966 None:intergenic
AGAGATAGAAAGTATCCAAA+TGG 0.427350 2.2:-26002354 MS.gene070375:CDS
GATGGAAGATTTCTCACAAA+TGG 0.431653 2.2:-25999009 MS.gene070375:CDS
AATCCAGGTGGTAGAGTCAT+TGG 0.438768 2.2:+26002669 None:intergenic
GAAAATTCGACACAATGAAT+AGG 0.442423 2.2:+26001010 None:intergenic
GGTGGTTATTGGAAAGCAAC+TGG 0.443966 2.2:-26002306 MS.gene070375:CDS
CTCATGGGATTAGAACCAAT+TGG 0.456147 2.2:-26002206 MS.gene070375:CDS
TTCAGCTATTTCTTATCCAA+TGG 0.459398 2.2:-26000685 MS.gene070375:CDS
GTTACCTGAAATAAATTTGA+GGG 0.459661 2.2:+26000651 None:intergenic
CCATCATTAAAGGTGTTTGA+GGG 0.461445 2.2:+25999027 None:intergenic
TCTCTACAAATGTGAACCTT+GGG 0.462150 2.2:-26002550 MS.gene070375:CDS
ATATTCATGCATAACCCAAT+TGG 0.465898 2.2:+26002191 None:intergenic
AACTCTCAAAAGAGACAAGT+TGG 0.466190 2.2:-26002267 MS.gene070375:CDS
TCCATCATTAAAGGTGTTTG+AGG 0.468229 2.2:+25999026 None:intergenic
TCAGCTATTTCTTATCCAAT+GGG 0.470769 2.2:-26000684 MS.gene070375:CDS
ATATTATTACATGTCTCTGT+TGG 0.473572 2.2:+26000756 None:intergenic
TCATGGGATTAGAACCAATT+GGG 0.493990 2.2:-26002205 MS.gene070375:CDS
AAATACAGAGACTGTATGAA+TGG 0.500184 2.2:-25998933 MS.gene070375:CDS
ATCTCTACAAATGTGAACCT+TGG 0.501203 2.2:-26002551 MS.gene070375:CDS
GAGATAGAAAGTATCCAAAT+GGG 0.506144 2.2:-26002353 MS.gene070375:CDS
GATATAGAAATACCTATGTA+TGG 0.506641 2.2:-25999068 MS.gene070375:CDS
ATGTGATGCTTCTTCATCTG+AGG 0.512565 2.2:-26000799 MS.gene070375:CDS
GCAACAAGTTCTTCATCTGT+AGG 0.512741 2.2:+26002636 None:intergenic
TGTTACCTGAAATAAATTTG+AGG 0.513454 2.2:+26000650 None:intergenic
AACAGGAAGAACTATAGAGC+TGG 0.515756 2.2:-26002592 MS.gene070375:CDS
GAGGGGTAGCTTATTCCCAT+TGG 0.525888 2.2:+26000669 None:intergenic
CAACAAGTTCTTCATCTGTA+GGG 0.531691 2.2:+26002637 None:intergenic
GGATACAAAGAAGGAAATGA+TGG 0.533065 2.2:-26000937 MS.gene070375:CDS
CGTCTTATTGAATCACATCC+TGG 0.536625 2.2:-26002168 MS.gene070375:CDS
AAGATCATTTCTTCCTAGCA+AGG 0.548567 2.2:-26002403 MS.gene070375:CDS
ACAAGTTAAGGATACAAAGA+AGG 0.556054 2.2:-26000946 MS.gene070375:CDS
AAGACACTTGTTTATTACAA+AGG 0.562015 2.2:-26002237 MS.gene070375:CDS
GTAGGGTGGAACCTGAATCC+AGG 0.574340 2.2:+26002654 None:intergenic
TGTGAACCTTGGGATTTACC+AGG 0.580071 2.2:-26002540 MS.gene070375:intron
TCTTCATCTGAGGTCACTCA+AGG 0.581348 2.2:-26000789 MS.gene070375:CDS
TTCCTCTCAAGATCATTCTG+TGG 0.587376 2.2:-25998883 MS.gene070375:CDS
TACCACTCCATATCCTTGCT+AGG 0.589851 2.2:+26002390 None:intergenic
TACAAAGGTAGAGCACCTCA+TGG 0.591677 2.2:-26002222 MS.gene070375:CDS
AATGTACCTGGTAAATCCCA+AGG 0.593393 2.2:+26002534 None:intergenic
TTATAGAAGCCACCATACAT+AGG 0.598247 2.2:+25999056 None:intergenic
TAATAATCATTCTATGGCAT+AGG 0.598308 2.2:+25998855 None:intergenic
GTCTTAGAAGAACAAGTGCA+AGG 0.598803 2.2:-26000915 MS.gene070375:CDS
AGCCACAGAATGATCTTGAG+AGG 0.603596 2.2:+25998881 None:intergenic
TCTTAGAAGAACAAGTGCAA+GGG 0.610254 2.2:-26000914 MS.gene070375:CDS
ACAAATAGAGCAACAAGAGG+TGG 0.614366 2.2:-26002324 MS.gene070375:CDS
AAAGAAGAGAGAGAAGCACC+AGG 0.628486 2.2:+26002150 None:intergenic
ACAAAGGTAGAGCACCTCAT+GGG 0.636035 2.2:-26002221 MS.gene070375:CDS
TTACCTGAAATAAATTTGAG+GGG 0.638445 2.2:+26000652 None:intergenic
GCTCCAATGACTCTACCACC+TGG 0.641849 2.2:-26002672 MS.gene070375:CDS
TTCCTAGCAAGGATATGGAG+TGG 0.642089 2.2:-26002392 MS.gene070375:CDS
ATAGAAATACCTATGTATGG+TGG 0.647987 2.2:-25999065 MS.gene070375:CDS
CTTAGAAGAACAAGTGCAAG+GGG 0.650573 2.2:-26000913 MS.gene070375:CDS
CAAGTTCTTCATCTGTAGGG+TGG 0.653084 2.2:+26002640 None:intergenic
TGTGCATGAAAATCCTCTGT+GGG 0.661578 2.2:+26000732 None:intergenic
CAAGGGGAAGACTCAAGTGG+TGG 0.675596 2.2:-26000897 MS.gene070375:CDS
AGAACAAATAGAGCAACAAG+AGG 0.677656 2.2:-26002327 MS.gene070375:CDS
GTGCAAGGGGAAGACTCAAG+TGG 0.679628 2.2:-26000900 MS.gene070375:CDS
TCAGATGAAGAAGCATCACA+TGG 0.689871 2.2:+26000801 None:intergenic
TTGTGCATGAAAATCCTCTG+TGG 0.696517 2.2:+26000731 None:intergenic
CAATTGGTTCTAATCCCATG+AGG 0.731060 2.2:+26002207 None:intergenic
GGGTGGAACCTGAATCCAGG+TGG 0.737177 2.2:+26002657 None:intergenic
ATGTAATAATATACCCACAG+AGG 0.747259 2.2:-26000745 MS.gene070375:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTAAACAATATGATAT+TGG + chr2.2:26000390-26000409 None:intergenic 10.0%
!! ATTTGATTAAAATACATAAT+AGG + chr2.2:26001311-26001330 None:intergenic 10.0%
!! TATAAAGAAAAAGAAAATAA+AGG + chr2.2:26000196-26000215 None:intergenic 10.0%
!! TTTGATTAAAATACATAATA+GGG + chr2.2:26001310-26001329 None:intergenic 10.0%
!!! ATGTATTTTAATCAAATTTA+GGG - chr2.2:26001314-26001333 MS.gene070375:intron 10.0%
!!! TAATTTTACATGTAAATTTT+TGG - chr2.2:26001508-26001527 MS.gene070375:intron 10.0%
!!! TATGTATTTTAATCAAATTT+AGG - chr2.2:26001313-26001332 MS.gene070375:intron 10.0%
!!! TGAAAAAATTCAATTTTTTA+AGG + chr2.2:25999953-25999972 None:intergenic 10.0%
!! ATTGTTATGAAAAAAATTTC+AGG - chr2.2:26000505-26000524 MS.gene070375:intron 15.0%
!! CTTAAAAATCATATAAAGAA+TGG - chr2.2:26000971-26000990 MS.gene070375:CDS 15.0%
!! TACATAATTCAACATAAATT+TGG - chr2.2:26002238-26002257 MS.gene070375:CDS 15.0%
!!! AAATTGAATTTTTTCATAGA+TGG - chr2.2:25999957-25999976 MS.gene070375:intron 15.0%
!!! AAATTTTTGGATTTTATCAA+TGG - chr2.2:26001521-26001540 MS.gene070375:intron 15.0%
!!! ATGTTAGTTTTTTTTACTTA+AGG - chr2.2:25999827-25999846 MS.gene070375:intron 15.0%
!!! ATTTATTTTTGTATCCTTTT+AGG + chr2.2:25999986-26000005 None:intergenic 15.0%
!!! TTTATTTTTGTATCCTTTTA+GGG + chr2.2:25999985-26000004 None:intergenic 15.0%
!! AATATTGTATGTAACATTTG+AGG + chr2.2:26001353-26001372 None:intergenic 20.0%
!! CAAATAACTAAATAGAACTA+GGG - chr2.2:25999619-25999638 MS.gene070375:intron 20.0%
!! GTAATATTATGAAACATTTG+TGG - chr2.2:25999657-25999676 MS.gene070375:intron 20.0%
!! TAAAAATATTGAAATGCCAA+AGG - chr2.2:26001430-26001449 MS.gene070375:intron 20.0%
!! TACTACCATTCATATATATA+TGG + chr2.2:25999094-25999113 None:intergenic 20.0%
!! TACTTAGAAAGAAAAATAAC+AGG - chr2.2:25998932-25998951 MS.gene070375:CDS 20.0%
!! TCAAATAACTAAATAGAACT+AGG - chr2.2:25999618-25999637 MS.gene070375:intron 20.0%
!!! AACAGTTTATTTTGGTTTTT+AGG - chr2.2:25999696-25999715 MS.gene070375:intron 20.0%
!!! ACTATATCTTTTGCTAAAAT+TGG + chr2.2:26001871-26001890 None:intergenic 20.0%
!!! CATTTTTTTTTTAATGATGC+AGG - chr2.2:26002451-26002470 MS.gene070375:intron 20.0%
!!! GTTTTGATGAAAATAGAATT+TGG - chr2.2:25999876-25999895 MS.gene070375:intron 20.0%
!!! TAACAATACTTAGCTTTTAA+TGG + chr2.2:26000492-26000511 None:intergenic 20.0%
!!! TAATCTTCTCTTTTTTAAGA+AGG - chr2.2:25999559-25999578 MS.gene070375:intron 20.0%
!!! TTTTTAAGAAGGAATATGTT+AGG - chr2.2:25999570-25999589 MS.gene070375:intron 20.0%
! AAAAAATAGATGACTTCCTT+TGG + chr2.2:26001449-26001468 None:intergenic 25.0%
! AAACATTTGTGGCATAATAA+AGG - chr2.2:25999668-25999687 MS.gene070375:intron 25.0%
! AAACTCAAAAATATGCTATG+TGG + chr2.2:26001548-26001567 None:intergenic 25.0%
! AAAGTGATGTACTTGATTTA+AGG + chr2.2:26001998-26002017 None:intergenic 25.0%
! AACATTAACTCCTAATTAGA+AGG + chr2.2:25999812-25999831 None:intergenic 25.0%
! AACTCAAAAATATGCTATGT+GGG + chr2.2:26001547-26001566 None:intergenic 25.0%
! AAGACACTTGTTTATTACAA+AGG - chr2.2:25999304-25999323 MS.gene070375:intron 25.0%
! AAGTGATGTACTTGATTTAA+GGG + chr2.2:26001997-26002016 None:intergenic 25.0%
! ACATATGAAAAAGCAAAAGT+GGG - chr2.2:26001169-26001188 MS.gene070375:intron 25.0%
! ACATTAACTCCTAATTAGAA+GGG + chr2.2:25999811-25999830 None:intergenic 25.0%
! AGCAATATATGCATTTGATT+GGG - chr2.2:26001941-26001960 MS.gene070375:intron 25.0%
! AGTCACCATATATATATGAA+TGG - chr2.2:25999086-25999105 MS.gene070375:intron 25.0%
! AGTCAGTCAAAAGAAATTAT+AGG + chr2.2:26001688-26001707 None:intergenic 25.0%
! ATATTATTACATGTCTCTGT+TGG + chr2.2:26000788-26000807 None:intergenic 25.0%
! ATGAATCTATTAGATTGGTA+GGG - chr2.2:26001145-26001164 MS.gene070375:intron 25.0%
! ATTAAAATACATAATAGGGC+TGG + chr2.2:26001306-26001325 None:intergenic 25.0%
! ATTATTGTAAGAAATGTACC+TGG + chr2.2:25999022-25999041 None:intergenic 25.0%
! CATTATTATATTGATCTGCT+TGG - chr2.2:26001205-26001224 MS.gene070375:intron 25.0%
! GATATAGAAATACCTATGTA+TGG - chr2.2:26002473-26002492 MS.gene070375:intron 25.0%
! GTCAGTCAAAAGAAATTATA+GGG + chr2.2:26001687-26001706 None:intergenic 25.0%
! GTTACCTGAAATAAATTTGA+GGG + chr2.2:26000893-26000912 None:intergenic 25.0%
! TAATAGTAATACTACGTACA+CGG + chr2.2:26000299-26000318 None:intergenic 25.0%
! TCAAAAGAAATTATAGGGAA+TGG + chr2.2:26001682-26001701 None:intergenic 25.0%
! TCCAACAAAAAATAATGAAG+AGG - chr2.2:26000571-26000590 MS.gene070375:intron 25.0%
! TGTTACCTGAAATAAATTTG+AGG + chr2.2:26000894-26000913 None:intergenic 25.0%
! TTACCTGAAATAAATTTGAG+GGG + chr2.2:26000892-26000911 None:intergenic 25.0%
!! GACTAGTGATATACAAATTT+TGG + chr2.2:26000046-26000065 None:intergenic 25.0%
!! GTAATTTTCGTCGATAAATT+TGG - chr2.2:26002323-26002342 MS.gene070375:CDS 25.0%
!! TGAACTATTTTCTTCTTCAT+AGG + chr2.2:26000840-26000859 None:intergenic 25.0%
!! TGAGCTTTATAAAAAGATTG+AGG + chr2.2:26001615-26001634 None:intergenic 25.0%
!!! AGGAAGTCATCTATTTTTTA+TGG - chr2.2:26001450-26001469 MS.gene070375:intron 25.0%
!!! TAATGGTACATTTTTTTGTG+TGG + chr2.2:26000475-26000494 None:intergenic 25.0%
!!! TCCTCTTCATTATTTTTTGT+TGG + chr2.2:26000575-26000594 None:intergenic 25.0%
!!! TGCAACTATTGTGTTTTAAA+TGG - chr2.2:25999435-25999454 MS.gene070375:intron 25.0%
AAAGATGTATCTTAGTGGTT+TGG + chr2.2:26001804-26001823 None:intergenic 30.0%
AAATACAGAGACTGTATGAA+TGG - chr2.2:26002608-26002627 MS.gene070375:CDS 30.0%
AAGAGAAGTAATGCAAACTA+TGG - chr2.2:26000679-26000698 MS.gene070375:CDS 30.0%
AAGCAAATGTATAGCAAGAT+TGG + chr2.2:26000336-26000355 None:intergenic 30.0%
AAGCTAAAGATGTATCTTAG+TGG + chr2.2:26001809-26001828 None:intergenic 30.0%
ACAAGTTAAGGATACAAAGA+AGG - chr2.2:26000595-26000614 MS.gene070375:intron 30.0%
AGCAAGATTGGAAAAAGAAA+AGG + chr2.2:26000324-26000343 None:intergenic 30.0%
ATAGAAATACCTATGTATGG+TGG - chr2.2:26002476-26002495 MS.gene070375:intron 30.0%
ATATTCATGCATAACCCAAT+TGG + chr2.2:25999353-25999372 None:intergenic 30.0%
ATGTAATAATATACCCACAG+AGG - chr2.2:26000796-26000815 MS.gene070375:CDS 30.0%
ATTGGAACTAAAGTTACTCT+TGG + chr2.2:26002096-26002115 None:intergenic 30.0%
ATTTCTATTGTAGAGGCTTT+AGG + chr2.2:26002040-26002059 None:intergenic 30.0%
ATTTGTGGCATAATAAAGGA+GGG - chr2.2:25999672-25999691 MS.gene070375:intron 30.0%
CATATGAAAAAGCAAAAGTG+GGG - chr2.2:26001170-26001189 MS.gene070375:intron 30.0%
CATGAATCTATTAGATTGGT+AGG - chr2.2:26001144-26001163 MS.gene070375:intron 30.0%
CATTAACTCCTAATTAGAAG+GGG + chr2.2:25999810-25999829 None:intergenic 30.0%
GAAAATTCGACACAATGAAT+AGG + chr2.2:26000534-26000553 None:intergenic 30.0%
GACATATGAAAAAGCAAAAG+TGG - chr2.2:26001168-26001187 MS.gene070375:intron 30.0%
GAGAAATCTTCCATCATTAA+AGG + chr2.2:26002527-26002546 None:intergenic 30.0%
GAGCAATATATGCATTTGAT+TGG - chr2.2:26001940-26001959 MS.gene070375:intron 30.0%
GAGTAAAGAGATCTTTACTT+TGG + chr2.2:26001729-26001748 None:intergenic 30.0%
GATCTTAAAGTGATGAAAGT+TGG - chr2.2:26001575-26001594 MS.gene070375:intron 30.0%
GCAAGATTGGAAAAAGAAAA+GGG + chr2.2:26000323-26000342 None:intergenic 30.0%
GCAATATATGCATTTGATTG+GGG - chr2.2:26001942-26001961 MS.gene070375:intron 30.0%
GTGTCATGAATCTATTAGAT+TGG - chr2.2:26001140-26001159 MS.gene070375:intron 30.0%
TAATGAAGAGGAACAAGTTA+AGG - chr2.2:26000583-26000602 MS.gene070375:intron 30.0%
TGAATCTATTAGATTGGTAG+GGG - chr2.2:26001146-26001165 MS.gene070375:intron 30.0%
TTAAAGCAAGCACTAAACAA+CGG + chr2.2:26000022-26000041 None:intergenic 30.0%
TTGGAACTAAAGTTACTCTT+GGG + chr2.2:26002095-26002114 None:intergenic 30.0%
TTTGGATACTTTCTATCTCT+TGG + chr2.2:25999187-25999206 None:intergenic 30.0%
! AACTTTAGTTCCAATTAGCT+AGG - chr2.2:26002101-26002120 MS.gene070375:intron 30.0%
! TGTATATCACTAGTCTATAC+AGG - chr2.2:26000051-26000070 MS.gene070375:intron 30.0%
!! AAGAATGGATTGTGATTGTT+TGG - chr2.2:26000986-26001005 MS.gene070375:CDS 30.0%
!! AGAGATAGAAAGTATCCAAA+TGG - chr2.2:25999187-25999206 MS.gene070375:intron 30.0%
!! GAGATAGAAAGTATCCAAAT+GGG - chr2.2:25999188-25999207 MS.gene070375:intron 30.0%
!! TAGGGTTATTTCTATTGTAG+AGG + chr2.2:26002047-26002066 None:intergenic 30.0%
!! TCAGCTATTTCTTATCCAAT+GGG - chr2.2:26000857-26000876 MS.gene070375:CDS 30.0%
!! TTCAGCTATTTCTTATCCAA+TGG - chr2.2:26000856-26000875 MS.gene070375:CDS 30.0%
!!! ACTAGGGTTTTGAAGAAAAT+AGG - chr2.2:25999635-25999654 MS.gene070375:intron 30.0%
AACTCTCAAAAGAGACAAGT+TGG - chr2.2:25999274-25999293 MS.gene070375:intron 35.0%
AAGATCATTTCTTCCTAGCA+AGG - chr2.2:25999138-25999157 MS.gene070375:intron 35.0%
AAGCAGTCATGAGATATATC+AGG + chr2.2:26002578-26002597 None:intergenic 35.0%
AGAACAAATAGAGCAACAAG+AGG - chr2.2:25999214-25999233 MS.gene070375:intron 35.0%
ATAACTCATGCCTAGCTAAT+TGG + chr2.2:26002114-26002133 None:intergenic 35.0%
ATCTCTACAAATGTGAACCT+TGG - chr2.2:25998990-25999009 MS.gene070375:CDS 35.0%
ATGGTGAAGAAAAGCCAAAT+TGG + chr2.2:26001663-26001682 None:intergenic 35.0%
ATTTCTTCCTAGCAAGGATA+TGG - chr2.2:25999144-25999163 MS.gene070375:intron 35.0%
CAACAAGTTCTTCATCTGTA+GGG + chr2.2:25998907-25998926 None:intergenic 35.0%
CATTTGTGGCATAATAAAGG+AGG - chr2.2:25999671-25999690 MS.gene070375:intron 35.0%
CTACCCCTCAAATTTATTTC+AGG - chr2.2:26000886-26000905 MS.gene070375:CDS 35.0%
CTATTTGTTCTTGACCCATT+TGG + chr2.2:25999205-25999224 None:intergenic 35.0%
GAACATATAGTGACTAGTGT+AGG + chr2.2:26000174-26000193 None:intergenic 35.0%
GAGCATAAATGCTACAAACA+TGG + chr2.2:26001253-26001272 None:intergenic 35.0%
GATGGAAGATTTCTCACAAA+TGG - chr2.2:26002532-26002551 MS.gene070375:intron 35.0%
GGATACAAAGAAGGAAATGA+TGG - chr2.2:26000604-26000623 MS.gene070375:intron 35.0%
GTATACAAACAGTAGAGGAA+TGG - chr2.2:25999724-25999743 MS.gene070375:intron 35.0%
TCATGGGATTAGAACCAATT+GGG - chr2.2:25999336-25999355 MS.gene070375:intron 35.0%
TCTCTACAAATGTGAACCTT+GGG - chr2.2:25998991-25999010 MS.gene070375:CDS 35.0%
TCTTAGAAGAACAAGTGCAA+GGG - chr2.2:26000627-26000646 MS.gene070375:intron 35.0%
TGCTACAAACATGGAGAAAA+AGG + chr2.2:26001244-26001263 None:intergenic 35.0%
TTATAGAAGCCACCATACAT+AGG + chr2.2:26002488-26002507 None:intergenic 35.0%
TTCATAGATGGAACCCTAAA+AGG - chr2.2:25999969-25999988 MS.gene070375:intron 35.0%
TTGCTGTATACAAACAGTAG+AGG - chr2.2:25999719-25999738 MS.gene070375:intron 35.0%
! AGGAGGGAAACAGTTTATTT+TGG - chr2.2:25999688-25999707 MS.gene070375:intron 35.0%
!! CCATCATTAAAGGTGTTTGA+GGG + chr2.2:26002517-26002536 None:intergenic 35.0%
!! GAAGCATCACATGGAAATTT+TGG + chr2.2:26000734-26000753 None:intergenic 35.0%
!! GCTCACTTCTAAAATTCACT+TGG - chr2.2:26001630-26001649 MS.gene070375:intron 35.0%
!! GTTTTGAACCTTGTTCTACA+AGG - chr2.2:26000139-26000158 MS.gene070375:intron 35.0%
!! TCCATCATTAAAGGTGTTTG+AGG + chr2.2:26002518-26002537 None:intergenic 35.0%
!! TTTACTCCCATTTTTCCTCA+CGG - chr2.2:26001742-26001761 MS.gene070375:intron 35.0%
AACAGGAAGAACTATAGAGC+TGG - chr2.2:25998949-25998968 MS.gene070375:CDS 40.0%
AACGAACCGTGAGGAAAAAT+GGG + chr2.2:26001751-26001770 None:intergenic 40.0%
AATGTACCTGGTAAATCCCA+AGG + chr2.2:25999010-25999029 None:intergenic 40.0%
ACAAATAGAGCAACAAGAGG+TGG - chr2.2:25999217-25999236 MS.gene070375:intron 40.0%
ATGTGATGCTTCTTCATCTG+AGG - chr2.2:26000742-26000761 MS.gene070375:CDS 40.0%
ATGTGCATCCTTGTAGAACA+AGG + chr2.2:26000150-26000169 None:intergenic 40.0%
CAAGTGGCAAAAGAAGAGTA+GGG + chr2.2:26002065-26002084 None:intergenic 40.0%
CCCTCAAACACCTTTAATGA+TGG - chr2.2:26002514-26002533 MS.gene070375:intron 40.0%
CTCATGGGATTAGAACCAAT+TGG - chr2.2:25999335-25999354 MS.gene070375:intron 40.0%
CTTAGAAGAACAAGTGCAAG+GGG - chr2.2:26000628-26000647 MS.gene070375:intron 40.0%
GCAACAAGTTCTTCATCTGT+AGG + chr2.2:25998908-25998927 None:intergenic 40.0%
GTCTTAGAAGAACAAGTGCA+AGG - chr2.2:26000626-26000645 MS.gene070375:intron 40.0%
TAACGAACCGTGAGGAAAAA+TGG + chr2.2:26001752-26001771 None:intergenic 40.0%
TGCTTCTCTCTCTTCTTTGA+AGG - chr2.2:25999396-25999415 MS.gene070375:intron 40.0%
TGTGCATGAAAATCCTCTGT+GGG + chr2.2:26000812-26000831 None:intergenic 40.0%
TGTGTTGTCCCCTTCTAATT+AGG - chr2.2:25999799-25999818 MS.gene070375:intron 40.0%
TTCCTCTCAAGATCATTCTG+TGG - chr2.2:26002658-26002677 MS.gene070375:CDS 40.0%
TTGTGCATGAAAATCCTCTG+TGG + chr2.2:26000813-26000832 None:intergenic 40.0%
! ATTTTTCCTCACGGTTCGTT+AGG - chr2.2:26001751-26001770 MS.gene070375:intron 40.0%
! CGTCTTATTGAATCACATCC+TGG - chr2.2:25999373-25999392 MS.gene070375:intron 40.0%
!! CAATTGGTTCTAATCCCATG+AGG + chr2.2:25999337-25999356 None:intergenic 40.0%
!! TCAGATGAAGAAGCATCACA+TGG + chr2.2:26000743-26000762 None:intergenic 40.0%
AATCCAGGTGGTAGAGTCAT+TGG + chr2.2:25998875-25998894 None:intergenic 45.0%
ACTCTTGGGAATAGTGCAAG+TGG + chr2.2:26002081-26002100 None:intergenic 45.0%
AGCCACAGAATGATCTTGAG+AGG + chr2.2:26002663-26002682 None:intergenic 45.0%
CAAGTTCTTCATCTGTAGGG+TGG + chr2.2:25998904-25998923 None:intergenic 45.0%
GAGCAACAAGAGGTGGTTAT+TGG - chr2.2:25999224-25999243 MS.gene070375:intron 45.0%
GCAAGTGGCAAAAGAAGAGT+AGG + chr2.2:26002066-26002085 None:intergenic 45.0%
GGTGGTTATTGGAAAGCAAC+TGG - chr2.2:25999235-25999254 MS.gene070375:intron 45.0%
TACCACTCCATATCCTTGCT+AGG + chr2.2:25999154-25999173 None:intergenic 45.0%
TGGAAATGCAGAGTAGGCAA+AGG + chr2.2:26001286-26001305 None:intergenic 45.0%
TGTGAACCTTGGGATTTACC+AGG - chr2.2:25999001-25999020 MS.gene070375:CDS 45.0%
TTCCTAGCAAGGATATGGAG+TGG - chr2.2:25999149-25999168 MS.gene070375:intron 45.0%
TTGAAACCTAACGAACCGTG+AGG + chr2.2:26001760-26001779 None:intergenic 45.0%
! ACAAAGGTAGAGCACCTCAT+GGG - chr2.2:25999320-25999339 MS.gene070375:intron 45.0%
! CACTTGGACTGACTCCAATT+TGG - chr2.2:26001646-26001665 MS.gene070375:intron 45.0%
! TACAAAGGTAGAGCACCTCA+TGG - chr2.2:25999319-25999338 MS.gene070375:intron 45.0%
! TCTTCATCTGAGGTCACTCA+AGG - chr2.2:26000752-26000771 MS.gene070375:CDS 45.0%
!! AAAGAAGAGAGAGAAGCACC+AGG + chr2.2:25999394-25999413 None:intergenic 45.0%
GAGGGGTAGCTTATTCCCAT+TGG + chr2.2:26000875-26000894 None:intergenic 50.0%
TAGGGCTGGAAATGCAGAGT+AGG + chr2.2:26001292-26001311 None:intergenic 50.0%
TGACTCTACCACCTGGATTC+AGG - chr2.2:25998876-25998895 MS.gene070375:CDS 50.0%
CAAGGGGAAGACTCAAGTGG+TGG - chr2.2:26000644-26000663 MS.gene070375:intron 55.0%
GCTCCAATGACTCTACCACC+TGG - chr2.2:25998869-25998888 MS.gene070375:CDS 55.0%
GTAGGGTGGAACCTGAATCC+AGG + chr2.2:25998890-25998909 None:intergenic 55.0%
GTGCAAGGGGAAGACTCAAG+TGG - chr2.2:26000641-26000660 MS.gene070375:intron 55.0%
GGGTGGAACCTGAATCCAGG+TGG + chr2.2:25998887-25998906 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 25998866 26002697 25998866 ID=MS.gene070375
chr2.2 mRNA 25998866 26002697 25998866 ID=MS.gene070375.t1;Parent=MS.gene070375
chr2.2 exon 26002541 26002697 26002541 ID=MS.gene070375.t1.exon1;Parent=MS.gene070375.t1
chr2.2 CDS 26002541 26002697 26002541 ID=cds.MS.gene070375.t1;Parent=MS.gene070375.t1
chr2.2 exon 26002146 26002426 26002146 ID=MS.gene070375.t1.exon2;Parent=MS.gene070375.t1
chr2.2 CDS 26002146 26002426 26002146 ID=cds.MS.gene070375.t1;Parent=MS.gene070375.t1
chr2.2 exon 26000656 26001036 26000656 ID=MS.gene070375.t1.exon3;Parent=MS.gene070375.t1
chr2.2 CDS 26000656 26001036 26000656 ID=cds.MS.gene070375.t1;Parent=MS.gene070375.t1
chr2.2 exon 25998866 25999090 25998866 ID=MS.gene070375.t1.exon4;Parent=MS.gene070375.t1
chr2.2 CDS 25998866 25999090 25998866 ID=cds.MS.gene070375.t1;Parent=MS.gene070375.t1
Gene Sequence

>MS.gene070375

ATGGCTCCAATGACTCTACCACCTGGATTCAGGTTCCACCCTACAGATGAAGAACTTGTTGCTTACTACTTAGAAAGAAAAATAACAGGAAGAACTATAGAGCTGGATATCATTGCAGAAGTTGATCTCTACAAATGTGAACCTTGGGATTTACCAGGTACATTTCTTACAATAATTTATAATCATCTCATGCATTCATATTTTTAATTTTATATAATTCAGTCACCATATATATATGAATGGTAGTAATTTTATTTGAATTTATTTGCAGAAAGATCATTTCTTCCTAGCAAGGATATGGAGTGGTATTTTTATAGTCCAAGAGATAGAAAGTATCCAAATGGGTCAAGAACAAATAGAGCAACAAGAGGTGGTTATTGGAAAGCAACTGGAAAAGATAGAGCAGTGAACTCTCAAAAGAGACAAGTTGGAATGAAGAAGACACTTGTTTATTACAAAGGTAGAGCACCTCATGGGATTAGAACCAATTGGGTTATGCATGAATATCGTCTTATTGAATCACATCCTGGTGCTTCTCTCTCTTCTTTGAAGGTACATATTAAGATTTATGCAACTATTGTGTTTTAAATGGCAAATATTAGTAATTAGTTGTTAGTAATATTCGCGAAAGAGTTTAAAATTTGAAATTCGCATGAACTTATTTTTCTCATTAATATTATCTTGTTCATCTATTAATCTTCTCTTTTTTAAGAAGGAATATGTTAGGCTTTATTTTGTATAAATATCATTTATCAAATAACTAAATAGAACTAGGGTTTTGAAGAAAATAGGTAATATTATGAAACATTTGTGGCATAATAAAGGAGGGAAACAGTTTATTTTGGTTTTTAGGTTGCTGTATACAAACAGTAGAGGAATGGTTCTTTTTTCTTTCTTTATCTATCTTTAAAATTTTTATGTATAACAATTGAATGTGTTGTCCCCTTCTAATTAGGAGTTAATGTTAGTTTTTTTTACTTAAGGAGTTTTGTTAGTTTTGAGAATGTCTCGTTTTGATGAAAATAGAATTTGGTATTTGAGTTTAAGTATCTATTCTCTTAATTTTATACATCATTTTTTGCTGCCTTAAAAAATTGAATTTTTTCATAGATGGAACCCTAAAAGGATACAAAAATAAATTCATGAGACAAAACCGTTGTTTAGTGCTTGCTTTAATCCAAAATTTGTATATCACTAGTCTATACAGGATTCTTTTGAGATTGATCAGCTTATGTTGTTATCATTATCTCACATAATCAAACTCATCTCTACTGTTTTGAACCTTGTTCTACAAGGATGCACATGCCTACACTAGTCACTATATGTTCCTTTATTTTCTTTTTCTTTATATGATTTGCAAACTTTAATTTTCTTTTCTCATCTTTAGAAAAATAGCTTATGATCAAAATGTTGTGATGAAAAATTCAGATCCGTGTACGTAGTATTACTATTAACCCTTTTCTTTTTCCAATCTTGCTATACATTTGCTTTATATTTTCTTACTTTTTTCTTGCATTGCATCCAATATCATATTGTTTAATTTTAATACACTCTCAATGTAAAAAGTGTTAAGATGTCAACAAATTACAATCATTAATGTTTTTGACCACACAAAAAAATGTACCATTAAAAGCTAAGTATTGTTATGAAAAAAATTTCAGGATTCCTATTCATTGTGTCGAATTTTCAAGAAGACAATTCAAATTCCAACAAAAAATAATGAAGAGGAACAAGTTAAGGATACAAAGAAGGAAATGATGGTCTTAGAAGAACAAGTGCAAGGGGAAGACTCAAGTGGTGGCACAGAGATTTCAAGAGAAGTAATGCAAACTATGGATGAAAAAATTCTTAATCAAGATGAACATCCAAAATTTCCATGTGATGCTTCTTCATCTGAGGTCACTCAAGGAACATGTACACCAACAGAGACATGTAATAATATACCCACAGAGGATTTTCATGCACAATTTGCCTATGAAGAAGAAAATAGTTCAGCTATTTCTTATCCAATGGGAATAAGCTACCCCTCAAATTTATTTCAGGTAACATTTTTTATACTGTTACTGAATTAGTTTATTAACATTATTTAACTTGAATCAAAACATCTTAAAAATCATATAAAGAATGGATTGTGATTGTTTGGTAGCATAAAAATTACATTAGATGTATACAAATTAAATTATTTAAATACTTCAATTATTTTATAAAAAAATACTTCAATTTCATAAACTTCATGATTGTTTGATTTTGTATTGTAGTAATATTAACGTAGATGTGTCATGAATCTATTAGATTGGTAGGGGACATATGAAAAAGCAAAAGTGGGGTCATAGAATGATCATTATTATATTGATCTGCTTGGTATATTAACTTTTCCTTTTTCTCCATGTTTGTAGCATTTATGCTCATGATGACTTCCTTTGCCTACTCTGCATTTCCAGCCCTATTATGTATTTTAATCAAATTTAGGGCTTCATTATCACACCTCAAATGTTACATACAATATTAGAATTTAAATCACTTCTAGTTCTTACTTCACACATTTGCATCAACTTGAACATTTATAAAAATATTGAAATGCCAAAGGAAGTCATCTATTTTTTATGGCAAAATTTAACATATTTTAATAGTATATGTCTTAGTAATTTTACATGTAAATTTTTGGATTTTATCAATGGCCCACATAGCATATTTTTGAGTTTCTCTTTTGATCTTAAAGTGATGAAAGTTGGAAGTATGATGAAGTCCTCAATCTTTTTATAAAGCTCACTTCTAAAATTCACTTGGACTGACTCCAATTTGGCTTTTCTTCACCATTCCCTATAATTTCTTTTGACTGACTATATACTCAAAACGTTTTCCAAAGTAAAGATCTCTTTACTCCCATTTTTCCTCACGGTTCGTTAGGTTTCAAAGACTAAAGCATATACACATACCAAACCACTAAGATACATCTTTAGCTTTAATCACATTCTTTTTTATCAATAATGTTTTGATCATTTCCAATTTTAGCAAAAGATATAGTGATGTTACAACTATTTCAACTATCTTTACAATATTTATTGAATTCATGCGAGCAATATATGCATTTGATTGGGGACTTCAATAAGTTCAAATTTTCTCTTACACCCTTAAATCAAGTACATCACTTTTTAATCTTTTCAATTTAAACCTAAAGCCTCTACAATAGAAATAACCCTACTCTTCTTTTGCCACTTGCACTATTCCCAAGAGTAACTTTAGTTCCAATTAGCTAGGCATGAGTTATACATGCATATGTCTTCATAGTTCATATATTTCAATAAGAACATTATTATTTTGAAGAAAATCAATAAGAACATTATAATTTATTTTTAAAGAGCTAGCAAAAAATACATAATTCAACATAAATTTGGTGACGAGATAATTAGTATTTATATAATTAAAATATTAAAGAAAAGCTTGCATTTAGTCTTATGTAATTTTCGTCGATAAATTTGGTGACGAGATAATTAAACATAAATTTAATTTTTATGCACTAATATTTTGACATTGATTTTATTTTTTCTAGTAATATACATCATTGATATTTAATAATTAATATAGCATTTTTTTTTTAATGATGCAGGATATAGAAATACCTATGTATGGTGGCTTCTATAATCAATTCCCTCAAACACCTTTAATGATGGAAGATTTCTCACAAATGGAGACAAAATCAATAATGAAGCCTGATATATCTCATGACTGCTTTTTGTATGACAAATACAGAGACTGTATGAATGGAACACTTGAAGAAATTATCTCTTTATGTTCCTCTCAAGATCATTCTGTGGCTTTTCCTATGCCATAG
Protein sequence

>MS.gene070375.t1

MAPMTLPPGFRFHPTDEELVAYYLERKITGRTIELDIIAEVDLYKCEPWDLPERSFLPSKDMEWYFYSPRDRKYPNGSRTNRATRGGYWKATGKDRAVNSQKRQVGMKKTLVYYKGRAPHGIRTNWVMHEYRLIESHPGASLSSLKDSYSLCRIFKKTIQIPTKNNEEEQVKDTKKEMMVLEEQVQGEDSSGGTEISREVMQTMDEKILNQDEHPKFPCDASSSEVTQGTCTPTETCNNIPTEDFHAQFAYEEENSSAISYPMGISYPSNLFQDIEIPMYGGFYNQFPQTPLMMEDFSQMETKSIMKPDISHDCFLYDKYRDCMNGTLEEIISLCSSQDHSVAFPMP