AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene070563

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene070563.t1 MTR_5g040420 92.269 401 19 3 1 399 1 391 0.0 738
MS.gene070563.t1 MTR_8g467490 63.636 429 92 16 1 399 1 395 2.85e-173 489
MS.gene070563.t1 MTR_6g011860 48.028 431 152 16 1 399 1 391 1.16e-116 345
MS.gene070563.t1 MTR_5g090970 52.066 242 90 6 6 234 10 238 1.61e-77 242
MS.gene070563.t1 MTR_2g068880 57.746 213 72 7 6 203 16 225 1.37e-75 237
MS.gene070563.t1 MTR_5g090970 51.653 242 90 7 6 234 10 237 2.62e-75 236
MS.gene070563.t1 MTR_2g068920 62.500 176 58 4 11 179 18 192 6.80e-73 229
MS.gene070563.t1 MTR_4g089135 51.685 178 71 2 14 176 15 192 7.20e-62 203
MS.gene070563.t1 MTR_2g080010 52.381 168 67 2 16 175 17 179 6.45e-60 198
MS.gene070563.t1 MTR_4g134460 54.938 162 62 3 12 173 52 202 1.77e-59 199
MS.gene070563.t1 MTR_7g085220 46.919 211 92 4 16 219 10 207 2.62e-59 196
MS.gene070563.t1 MTR_3g088110 40.304 263 131 7 16 269 9 254 7.22e-59 193
MS.gene070563.t1 MTR_2157s0010 42.672 232 117 5 16 234 10 238 8.45e-59 192
MS.gene070563.t1 MTR_2g093810 51.744 172 79 2 1 172 1 168 1.51e-58 194
MS.gene070563.t1 MTR_5g041940 53.988 163 65 3 16 176 5 159 7.35e-57 187
MS.gene070563.t1 MTR_2g079990 53.039 181 74 5 16 196 18 187 1.72e-55 187
MS.gene070563.t1 MTR_7g100990 53.125 160 71 2 16 175 13 168 1.90e-55 186
MS.gene070563.t1 MTR_8g094580 51.534 163 60 3 16 172 9 158 2.57e-55 184
MS.gene070563.t1 MTR_4g081870 54.037 161 64 3 16 174 11 163 2.97e-54 181
MS.gene070563.t1 MTR_4g036030 48.256 172 74 3 14 182 7 166 1.06e-53 182
MS.gene070563.t1 MTR_8g076110 36.364 264 142 5 10 263 2 249 1.58e-53 180
MS.gene070563.t1 MTR_8g059170 53.614 166 68 5 16 181 16 172 4.78e-53 179
MS.gene070563.t1 MTR_2g079990 48.259 201 81 4 16 196 18 215 5.76e-53 181
MS.gene070563.t1 MTR_3g096920 52.229 157 67 2 16 172 9 157 6.09e-53 178
MS.gene070563.t1 MTR_5g012080 39.583 240 111 6 14 234 7 231 1.70e-52 179
MS.gene070563.t1 MTR_5g021710 44.624 186 86 4 8 188 2 175 5.01e-52 177
MS.gene070563.t1 MTR_3g435150 50.273 183 79 4 8 189 10 181 9.17e-52 175
MS.gene070563.t1 MTR_4g108760 50.000 176 76 4 8 182 13 177 1.22e-51 177
MS.gene070563.t1 MTR_4g101680 47.337 169 74 3 14 179 7 163 3.02e-51 176
MS.gene070563.t1 MTR_2g064090 51.250 160 67 4 16 173 8 158 5.86e-51 174
MS.gene070563.t1 MTR_3g096920 58.140 129 51 1 16 144 9 134 1.27e-50 173
MS.gene070563.t1 MTR_4g075980 47.701 174 74 4 11 180 12 172 1.44e-49 169
MS.gene070563.t1 MTR_6g012670 52.795 161 64 3 16 174 22 172 1.63e-49 170
MS.gene070563.t1 MTR_2g078700 48.485 165 79 2 11 175 20 178 2.12e-49 171
MS.gene070563.t1 MTR_6g477900 42.857 189 95 4 16 202 8 185 5.79e-49 166
MS.gene070563.t1 MTR_6g032770 47.486 179 84 4 9 184 11 182 9.16e-49 170
MS.gene070563.t1 MTR_7g085260 46.703 182 85 4 5 182 8 181 2.50e-48 169
MS.gene070563.t1 MTR_4g035590 49.390 164 67 3 14 174 8 158 3.22e-48 167
MS.gene070563.t1 MTR_6g084430 45.562 169 80 3 10 178 1 157 7.17e-48 166
MS.gene070563.t1 MTR_3g109340 47.159 176 78 3 1 175 12 173 1.00e-47 166
MS.gene070563.t1 MTR_3g109340 48.000 175 79 3 1 175 12 174 1.09e-47 166
MS.gene070563.t1 MTR_3g064580 42.857 189 94 5 16 202 8 184 1.18e-47 172
MS.gene070563.t1 MTR_1g096430 42.703 185 90 4 10 191 3 174 1.95e-47 165
MS.gene070563.t1 MTR_7g005280 48.603 179 78 3 1 178 1 166 2.32e-47 162
MS.gene070563.t1 MTR_2g062730 41.799 189 94 4 13 196 9 186 9.40e-47 163
MS.gene070563.t1 MTR_5g076850 46.250 160 74 3 16 173 8 157 3.06e-46 168
MS.gene070563.t1 MTR_8g024480 45.614 171 75 4 14 174 15 177 3.32e-46 164
MS.gene070563.t1 MTR_5g014300 48.193 166 64 5 16 172 8 160 3.47e-46 162
MS.gene070563.t1 MTR_1g008740 44.886 176 82 4 1 173 1 164 1.03e-45 160
MS.gene070563.t1 MTR_1g008740 44.886 176 82 4 1 173 15 178 1.46e-45 160
MS.gene070563.t1 MTR_5g069030 48.148 162 72 4 17 176 28 179 3.33e-45 165
MS.gene070563.t1 MTR_3g070030 44.970 169 80 3 17 182 22 180 5.50e-45 159
MS.gene070563.t1 MTR_4g098630 47.059 170 79 4 16 182 8 169 9.31e-45 157
MS.gene070563.t1 MTR_7g011130 48.503 167 73 5 17 174 22 184 1.13e-44 158
MS.gene070563.t1 MTR_3g093050 41.546 207 100 6 17 219 25 214 2.36e-44 162
MS.gene070563.t1 MTR_3g116070 52.448 143 66 2 3 143 11 153 4.28e-44 157
MS.gene070563.t1 MTR_7g011120 46.584 161 79 3 17 174 11 167 4.69e-44 155
MS.gene070563.t1 MTR_3g093050 41.546 207 100 6 17 219 25 214 4.75e-44 162
MS.gene070563.t1 MTR_1g069805 37.615 218 116 5 16 231 12 211 7.27e-44 154
MS.gene070563.t1 MTR_3g096140 44.172 163 79 4 12 172 5 157 7.38e-44 154
MS.gene070563.t1 MTR_2g064470 44.509 173 85 3 10 182 7 168 1.07e-43 154
MS.gene070563.t1 MTR_1g097300 45.963 161 75 3 15 173 20 170 1.08e-43 160
MS.gene070563.t1 MTR_3g096140 44.172 163 79 4 12 172 5 157 4.28e-43 154
MS.gene070563.t1 MTR_8g063550 44.099 161 78 4 14 172 6 156 5.27e-43 153
MS.gene070563.t1 MTR_8g063550 41.040 173 90 4 14 184 6 168 7.22e-43 155
MS.gene070563.t1 MTR_8g063550 44.099 161 78 4 14 172 6 156 7.40e-43 155
MS.gene070563.t1 MTR_3g093040 41.860 172 87 5 10 178 103 264 3.33e-42 150
MS.gene070563.t1 MTR_1g090723 45.399 163 76 5 16 175 10 162 6.95e-42 156
MS.gene070563.t1 MTR_7g097090 43.226 155 76 2 16 170 12 154 3.50e-41 147
MS.gene070563.t1 MTR_1g090723 44.785 163 76 5 16 175 10 161 3.71e-41 154
MS.gene070563.t1 MTR_1g090723 44.785 163 76 5 16 175 10 161 4.29e-41 153
MS.gene070563.t1 MTR_8g093580 42.236 161 81 3 14 172 6 156 5.56e-41 151
MS.gene070563.t1 MTR_1g090720 43.860 171 74 4 14 174 42 200 3.89e-40 149
MS.gene070563.t1 MTR_0036s0150 44.172 163 77 5 16 175 7 158 2.23e-39 148
MS.gene070563.t1 MTR_8g099750 51.587 126 59 1 16 141 16 139 5.38e-39 139
MS.gene070563.t1 MTR_2g086880 47.244 127 64 2 14 139 18 142 1.90e-36 139
MS.gene070563.t1 MTR_2g086880 47.244 127 64 2 14 139 18 142 2.28e-36 140
MS.gene070563.t1 MTR_3g098810 42.515 167 90 3 16 180 16 178 5.50e-36 132
MS.gene070563.t1 MTR_3g070040 41.975 162 85 4 18 179 12 164 7.85e-34 129
MS.gene070563.t1 MTR_3g098810 45.205 146 76 2 1 144 1 144 1.07e-33 124
MS.gene070563.t1 MTR_8g023840 45.865 133 68 3 17 146 14 145 1.98e-33 129
MS.gene070563.t1 MTR_4g052620 44.118 136 70 3 10 140 1 135 2.75e-33 125
MS.gene070563.t1 MTR_3g096140 41.379 145 73 4 30 172 2 136 3.86e-33 127
MS.gene070563.t1 MTR_2g086690 46.617 133 60 5 16 140 6 135 2.06e-32 122
MS.gene070563.t1 MTR_8g023860 46.269 134 67 4 10 140 9 140 6.40e-32 125
MS.gene070563.t1 MTR_8g094580 52.252 111 46 3 62 172 1 104 9.11e-32 120
MS.gene070563.t1 MTR_7g105170 35.976 164 95 5 16 173 6 165 2.38e-31 120
MS.gene070563.t1 MTR_8g023900 33.663 202 117 4 17 215 196 383 1.28e-29 119
MS.gene070563.t1 MTR_8g023900 36.196 163 88 5 15 173 12 162 1.48e-26 111
MS.gene070563.t1 MTR_4g094302 36.943 157 89 2 16 172 13 159 2.80e-29 112
MS.gene070563.t1 MTR_8g023930 33.333 201 116 5 14 210 23 209 1.40e-27 114
MS.gene070563.t1 MTR_4g094302 40.476 126 67 1 16 141 13 130 4.76e-27 105
MS.gene070563.t1 MTR_8g023880 32.258 186 88 8 17 184 10 175 1.09e-19 88.6
MS.gene070563.t1 MTR_7g070140 46.753 77 41 0 67 143 17 93 1.58e-19 84.7
MS.gene070563.t1 MTR_8g093790 32.934 167 82 5 16 182 12 148 2.84e-19 85.5
MS.gene070563.t1 MTR_7g083330 34.058 138 84 5 11 145 14 147 7.76e-18 81.6
MS.gene070563.t1 MTR_7g083360 32.374 139 87 5 12 147 7 141 1.15e-16 77.0
MS.gene070563.t1 MTR_7g083370 31.746 126 78 5 17 139 13 133 7.50e-16 74.3
MS.gene070563.t1 MTR_3g096400 30.247 162 97 6 16 171 9 160 1.71e-14 72.4
MS.gene070563.t1 MTR_1g087190 60.870 46 17 1 16 60 7 52 9.07e-14 65.9
MS.gene070563.t1 MTR_7g070150 41.026 78 35 1 107 184 3 69 4.39e-13 65.1
MS.gene070563.t1 MTR_7g116460 28.902 173 100 7 20 183 11 169 2.02e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene070563.t1 AT1G26870 55.963 327 121 8 2 313 3 321 9.23e-112 333
MS.gene070563.t1 AT5G39820 67.839 199 50 3 2 186 8 206 7.79e-98 295
MS.gene070563.t1 AT2G43000 63.218 174 53 3 6 179 10 172 3.48e-75 235
MS.gene070563.t1 AT3G12910 46.484 256 127 5 6 254 13 265 1.28e-66 214
MS.gene070563.t1 AT2G02450 55.625 160 60 3 13 172 50 198 9.29e-60 199
MS.gene070563.t1 AT2G02450 55.625 160 60 3 13 172 50 198 1.04e-59 199
MS.gene070563.t1 AT3G15510 52.761 163 72 2 18 176 21 182 3.76e-58 194
MS.gene070563.t1 AT3G04070 53.614 166 69 3 16 176 12 174 6.05e-58 192
MS.gene070563.t1 AT1G61110 53.179 173 73 3 16 181 18 189 8.05e-57 189
MS.gene070563.t1 AT1G01720 51.497 167 74 2 14 180 7 166 9.14e-56 185
MS.gene070563.t1 AT3G04070 48.901 182 69 3 16 176 12 190 1.70e-55 187
MS.gene070563.t1 AT1G69490 44.076 211 108 5 16 222 11 215 2.94e-55 183
MS.gene070563.t1 AT4G27410 49.189 185 74 5 16 196 16 184 1.41e-54 182
MS.gene070563.t1 AT1G77450 51.829 164 71 2 16 179 12 167 1.76e-54 181
MS.gene070563.t1 AT1G76420 40.467 257 128 6 2 249 15 255 2.93e-54 183
MS.gene070563.t1 AT5G07680 45.815 227 103 6 4 220 9 225 3.28e-54 182
MS.gene070563.t1 AT3G15500 53.939 165 66 4 16 180 16 170 6.45e-54 181
MS.gene070563.t1 AT1G52890 51.705 176 74 5 16 191 16 180 7.81e-54 181
MS.gene070563.t1 AT4G36160 48.315 178 77 3 14 188 10 175 1.07e-53 182
MS.gene070563.t1 AT4G36160 48.315 178 77 3 14 188 10 175 1.07e-53 182
MS.gene070563.t1 AT4G36160 48.315 178 77 3 14 188 14 179 1.12e-53 182
MS.gene070563.t1 AT1G52880 55.952 168 64 3 18 179 21 184 2.55e-53 180
MS.gene070563.t1 AT5G07680 46.977 215 96 5 16 220 5 211 2.79e-53 180
MS.gene070563.t1 AT5G63790 41.453 234 114 6 12 234 47 268 4.47e-53 179
MS.gene070563.t1 AT5G08790 49.419 172 66 4 12 175 4 162 4.55e-53 178
MS.gene070563.t1 AT5G61430 35.256 312 152 8 4 293 8 291 5.53e-53 179
MS.gene070563.t1 AT5G63790 41.453 234 114 6 12 234 57 278 6.03e-53 179
MS.gene070563.t1 AT5G39610 49.457 184 79 4 1 182 9 180 2.91e-52 176
MS.gene070563.t1 AT2G17040 50.289 173 69 4 12 180 4 163 3.84e-52 176
MS.gene070563.t1 AT2G18060 46.629 178 79 4 14 188 9 173 4.33e-52 178
MS.gene070563.t1 AT2G18060 46.629 178 79 4 14 188 9 173 4.33e-52 178
MS.gene070563.t1 AT1G12260 47.929 169 73 3 14 179 7 163 1.79e-51 176
MS.gene070563.t1 AT5G62380 48.795 166 70 3 14 176 7 160 1.86e-51 176
MS.gene070563.t1 AT5G62380 48.795 166 70 3 14 176 7 160 1.86e-51 176
MS.gene070563.t1 AT1G12260 47.929 169 73 3 14 179 7 163 2.39e-51 177
MS.gene070563.t1 AT4G10350 50.000 164 69 3 14 174 9 162 1.06e-50 174
MS.gene070563.t1 AT2G24430 47.368 171 81 2 8 178 10 171 2.18e-50 172
MS.gene070563.t1 AT2G24430 47.368 171 81 2 8 178 10 171 2.18e-50 172
MS.gene070563.t1 AT4G27410 45.050 202 74 6 16 196 16 201 2.51e-50 172
MS.gene070563.t1 AT3G18400 49.708 171 74 4 10 180 1 159 2.51e-50 172
MS.gene070563.t1 AT5G18270 49.412 170 74 4 7 174 15 174 5.50e-50 172
MS.gene070563.t1 AT3G17730 49.686 159 68 3 16 172 8 156 6.11e-50 169
MS.gene070563.t1 AT1G62700 40.625 224 111 5 14 234 7 211 6.19e-50 173
MS.gene070563.t1 AT1G62700 40.625 224 111 5 14 234 7 211 6.19e-50 173
MS.gene070563.t1 AT3G04060 48.851 174 76 4 1 172 9 171 6.60e-50 172
MS.gene070563.t1 AT5G18270 48.824 170 75 4 7 174 15 174 3.34e-49 170
MS.gene070563.t1 AT3G29035 57.554 139 55 2 3 141 15 149 6.03e-49 168
MS.gene070563.t1 AT1G33280 49.390 164 67 3 14 174 8 158 1.45e-48 167
MS.gene070563.t1 AT4G17980 47.170 159 76 2 16 172 8 160 1.99e-48 166
MS.gene070563.t1 AT4G17980 46.296 162 79 2 13 172 5 160 2.06e-48 166
MS.gene070563.t1 AT3G03200 46.067 178 84 5 16 190 8 176 2.57e-48 171
MS.gene070563.t1 AT5G66300 47.977 173 74 5 14 181 12 173 3.69e-48 166
MS.gene070563.t1 AT5G53950 47.953 171 83 1 12 182 15 179 3.80e-48 168
MS.gene070563.t1 AT1G65910 48.125 160 71 3 16 173 8 157 6.22e-48 172
MS.gene070563.t1 AT3G15170 47.929 169 81 3 11 178 16 178 1.62e-47 164
MS.gene070563.t1 AT1G71930 39.726 219 111 7 16 229 11 213 2.46e-47 164
MS.gene070563.t1 AT1G71930 39.726 219 111 7 16 229 11 213 2.46e-47 164
MS.gene070563.t1 AT5G17260 47.500 160 71 4 16 172 8 157 4.55e-47 167
MS.gene070563.t1 AT5G13180 48.750 160 70 2 16 175 16 163 7.58e-47 161
MS.gene070563.t1 AT2G46770 46.154 169 81 4 14 174 16 182 1.35e-46 164
MS.gene070563.t1 AT3G10500 46.951 164 75 4 14 175 9 162 1.75e-45 165
MS.gene070563.t1 AT1G54330 47.590 166 72 4 16 179 8 160 2.86e-45 158
MS.gene070563.t1 AT3G10490 46.012 163 77 3 14 174 27 180 4.46e-45 156
MS.gene070563.t1 AT3G61910 44.022 184 92 6 14 189 11 191 4.59e-45 159
MS.gene070563.t1 AT4G35580 48.734 158 69 4 17 172 12 159 5.94e-45 163
MS.gene070563.t1 AT4G35580 48.734 158 69 4 17 172 12 159 6.02e-45 163
MS.gene070563.t1 AT5G46590 55.469 128 54 2 16 141 8 134 6.54e-45 157
MS.gene070563.t1 AT1G79580 45.732 164 74 3 14 174 17 168 7.36e-45 159
MS.gene070563.t1 AT1G79580 45.732 164 74 3 14 174 17 168 7.36e-45 159
MS.gene070563.t1 AT1G79580 45.732 164 74 3 14 174 17 168 7.36e-45 159
MS.gene070563.t1 AT1G79580 45.732 164 74 3 14 174 17 168 7.36e-45 159
MS.gene070563.t1 AT1G79580 45.732 164 74 3 14 174 17 168 7.36e-45 159
MS.gene070563.t1 AT4G35580 48.125 160 71 4 17 174 12 161 7.38e-45 162
MS.gene070563.t1 AT5G46590 55.469 128 54 2 16 141 8 134 9.39e-45 157
MS.gene070563.t1 AT3G10480 46.061 165 74 4 14 174 27 180 1.00e-44 160
MS.gene070563.t1 AT3G10480 45.509 167 71 4 14 174 27 179 1.03e-44 160
MS.gene070563.t1 AT1G33060 43.860 171 84 3 12 180 22 182 1.62e-44 163
MS.gene070563.t1 AT1G33060 43.860 171 84 3 12 180 22 182 1.86e-44 163
MS.gene070563.t1 AT1G56010 48.750 160 70 5 16 172 21 171 1.99e-44 157
MS.gene070563.t1 AT3G12977 44.068 177 88 4 3 177 5 172 2.04e-44 155
MS.gene070563.t1 AT1G32770 44.379 169 81 4 14 174 16 179 5.52e-44 156
MS.gene070563.t1 AT1G34180 42.328 189 90 4 16 195 18 196 6.89e-44 158
MS.gene070563.t1 AT3G10490 45.833 168 70 4 14 174 27 180 7.41e-44 158
MS.gene070563.t1 AT5G04410 45.732 164 77 3 14 175 9 162 1.25e-43 160
MS.gene070563.t1 AT5G24590 45.402 174 83 4 4 174 2 166 1.78e-43 157
MS.gene070563.t1 AT1G34180 42.703 185 87 4 16 191 18 192 6.31e-43 158
MS.gene070563.t1 AT1G32510 42.442 172 85 3 16 180 8 172 8.02e-43 151
MS.gene070563.t1 AT1G34190 45.679 162 76 3 16 175 18 169 4.66e-42 155
MS.gene070563.t1 AT3G49530 43.671 158 78 3 17 172 16 164 9.97e-42 152
MS.gene070563.t1 AT1G34180 39.801 201 90 4 16 195 18 208 1.11e-41 152
MS.gene070563.t1 AT3G49530 44.099 161 78 4 15 172 13 164 2.50e-41 152
MS.gene070563.t1 AT1G34180 40.102 197 87 4 16 191 18 204 7.77e-41 152
MS.gene070563.t1 AT2G33480 46.914 162 73 4 16 177 17 165 1.19e-40 145
MS.gene070563.t1 AT2G33480 44.944 178 82 5 1 177 1 163 1.37e-40 145
MS.gene070563.t1 AT5G09330 41.615 161 82 3 14 172 6 156 1.48e-40 150
MS.gene070563.t1 AT5G09330 41.615 161 82 3 14 172 6 156 1.48e-40 150
MS.gene070563.t1 AT5G09330 41.615 161 82 3 14 172 6 156 1.48e-40 150
MS.gene070563.t1 AT5G09330 41.615 161 82 3 14 172 6 156 1.48e-40 150
MS.gene070563.t1 AT5G09330 41.615 161 82 3 14 172 6 156 1.48e-40 150
MS.gene070563.t1 AT4G28530 39.888 178 79 3 16 177 12 177 7.08e-40 145
MS.gene070563.t1 AT5G64060 34.601 263 141 12 14 263 6 250 8.86e-39 142
MS.gene070563.t1 AT3G10480 38.889 198 73 5 14 174 27 213 1.11e-38 145
MS.gene070563.t1 AT5G22290 41.520 171 80 5 14 180 21 175 1.21e-38 142
MS.gene070563.t1 AT3G44290 46.825 126 64 2 15 139 15 138 1.17e-36 133
MS.gene070563.t1 AT2G27300 43.750 128 69 2 13 139 13 138 1.98e-36 135
MS.gene070563.t1 AT3G44290 46.825 126 64 2 15 139 15 138 3.15e-36 135
MS.gene070563.t1 AT2G43000 60.577 104 30 3 76 179 2 94 4.37e-34 125
MS.gene070563.t1 AT5G04395 41.026 156 77 3 16 157 30 184 5.53e-34 125
MS.gene070563.t1 AT5G61430 33.071 254 122 7 62 293 1 228 8.92e-34 127
MS.gene070563.t1 AT1G32870 42.169 166 80 5 14 175 10 163 9.60e-32 126
MS.gene070563.t1 AT1G32870 42.169 166 80 5 14 175 10 163 1.07e-31 126
MS.gene070563.t1 AT1G32870 42.169 166 80 5 14 175 46 199 1.91e-31 125
MS.gene070563.t1 AT5G22380 36.453 203 108 10 11 206 3 191 1.98e-31 120
MS.gene070563.t1 AT5G64530 37.278 169 88 3 16 178 5 161 4.32e-31 117
MS.gene070563.t1 AT4G10350 50.877 114 46 2 61 174 12 115 6.97e-31 120
MS.gene070563.t1 AT5G64530 44.882 127 58 2 16 142 5 119 4.34e-30 114
MS.gene070563.t1 AT3G44350 31.276 243 138 8 10 234 1 232 9.08e-30 115
MS.gene070563.t1 AT3G12977 47.826 115 51 3 63 177 14 119 2.28e-29 114
MS.gene070563.t1 AT1G56010 48.649 111 50 3 62 172 1 104 1.65e-28 112
MS.gene070563.t1 AT3G44350 39.130 138 74 4 10 140 1 135 6.17e-28 108
MS.gene070563.t1 AT4G01550 41.045 134 75 3 15 144 5 138 3.19e-27 112
MS.gene070563.t1 AT4G01520 38.462 143 81 5 17 154 7 147 1.02e-24 103
MS.gene070563.t1 AT4G01540 39.310 145 81 5 15 154 5 147 1.60e-24 104
MS.gene070563.t1 AT4G01540 39.310 145 81 5 15 154 5 147 2.52e-24 103
MS.gene070563.t1 AT4G01540 39.310 145 81 5 15 154 5 147 3.16e-24 104
MS.gene070563.t1 AT4G01540 39.310 145 81 5 15 154 5 147 3.29e-24 103
MS.gene070563.t1 AT2G18060 48.454 97 37 3 92 188 2 85 1.77e-21 94.0
MS.gene070563.t1 AT2G33480 42.342 111 54 3 67 177 8 108 2.20e-21 92.0
MS.gene070563.t1 AT4G28530 38.889 126 61 2 16 125 12 137 3.36e-21 93.6
MS.gene070563.t1 AT1G02230 39.098 133 73 4 17 144 6 135 6.23e-21 93.6
MS.gene070563.t1 AT1G02250 41.406 128 67 4 17 139 6 130 1.20e-20 92.8
MS.gene070563.t1 AT3G04420 39.370 127 71 3 17 139 6 130 1.64e-20 91.3
MS.gene070563.t1 AT3G04420 39.370 127 71 3 17 139 6 130 6.53e-20 90.5
MS.gene070563.t1 AT1G01010 36.364 165 76 9 17 169 6 153 2.91e-18 86.7
MS.gene070563.t1 AT1G02220 39.370 127 68 4 17 139 6 127 9.45e-17 81.6
MS.gene070563.t1 AT5G14000 33.071 127 79 3 17 141 18 140 1.27e-15 74.3
MS.gene070563.t1 AT5G14000 27.273 165 103 4 17 179 18 167 1.93e-15 75.1
MS.gene070563.t1 AT5G50820 36.842 133 68 6 16 143 19 140 2.26e-15 74.7
MS.gene070563.t1 AT3G56530 32.090 134 86 3 16 146 54 185 4.57e-14 73.2
MS.gene070563.t1 AT3G10490 37.634 93 39 3 87 174 2 80 5.97e-13 70.1
MS.gene070563.t1 AT3G10490 37.634 93 39 3 87 174 2 80 5.97e-13 70.1
MS.gene070563.t1 AT3G04430 33.835 133 74 5 20 140 6 136 7.01e-13 67.4
MS.gene070563.t1 AT5G22290 39.560 91 36 4 93 180 2 76 1.30e-11 64.7

Find 85 sgRNAs with CRISPR-Local

Find 127 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATGTTGTTTGAACAAAAT+TGG 0.184460 5.3:-28327987 None:intergenic
TAACATCTACATCAAAATTT+TGG 0.208775 5.3:-28328065 None:intergenic
AAGTTATCTTACCAGGATTT+AGG 0.220891 5.3:+28326420 MS.gene070563:CDS
GAAACAGTGCAAGGCCTAAT+AGG 0.247551 5.3:+28327023 MS.gene070563:CDS
TGAAACATCCATTGTAGATT+TGG 0.251668 5.3:-28328229 None:intergenic
TTTGTTGAACCTTTCTCTTT+AGG 0.261897 5.3:-28326478 None:intergenic
GGACTAATAATGGATTTATA+AGG 0.264927 5.3:-28328090 None:intergenic
GGGTAACTGGAGCTGGATTC+TGG 0.266844 5.3:+28327044 MS.gene070563:CDS
CCAATGCATTATTATCATAT+TGG 0.276292 5.3:-28328386 None:intergenic
GTGTAGTAATGGACTAATAA+TGG 0.280115 5.3:-28328100 None:intergenic
GATTGGTGAATTTCAATATT+GGG 0.291835 5.3:+28328460 MS.gene070563:CDS
GGATTGGTGAATTTCAATAT+TGG 0.293762 5.3:+28328459 MS.gene070563:CDS
ACATTCACATTAACATTATA+AGG 0.303980 5.3:-28328417 None:intergenic
ATTTAGATCTTCATTTGAAA+TGG 0.324824 5.3:-28328142 None:intergenic
CATGGAAGTCAAATTTGCTT+TGG 0.326417 5.3:+28328487 MS.gene070563:CDS
AAAGAGCTTTGTCTCACTCT+TGG 0.327372 5.3:+28327905 MS.gene070563:CDS
GACTAATAATGGATTTATAA+GGG 0.345533 5.3:-28328089 None:intergenic
AAGAGCTTTGTCTCACTCTT+GGG 0.354907 5.3:+28327906 MS.gene070563:CDS
GCAAGGCCTAATAGGGTAAC+TGG 0.368447 5.3:+28327031 MS.gene070563:CDS
GAACCTTCTGAGGAGTAGAT+AGG 0.383654 5.3:-28327088 None:intergenic
CAACTGATGAAGAGCTTGTT+GGG 0.385394 5.3:+28326450 MS.gene070563:CDS
TAACTAGAGGGAACATCAAT+AGG 0.388427 5.3:-28328525 None:intergenic
AAAAGACTAAGGATTTCTTT+AGG 0.389485 5.3:-28327123 None:intergenic
ATGGAAGTCAAATTTGCTTT+GGG 0.392121 5.3:+28328488 MS.gene070563:CDS
CATGTTGTTTGAACAAAATT+GGG 0.393384 5.3:-28327986 None:intergenic
CCAGCTCCAGTTACCCTATT+AGG 0.395888 5.3:-28327037 None:intergenic
TCTTCCTTTGTAAAAGACTA+AGG 0.405196 5.3:-28327134 None:intergenic
TGATAATAATGCATTGGTTA+AGG 0.409165 5.3:+28328392 MS.gene070563:CDS
CCAACTGATGAAGAGCTTGT+TGG 0.413211 5.3:+28326449 MS.gene070563:CDS
TAGAGGTTCTTGTTTCAGAT+AGG 0.422193 5.3:-28327936 None:intergenic
TTTAGATCTTCATTTGAAAT+GGG 0.430962 5.3:-28328141 None:intergenic
AAGTACTTCTTTGGTAAAAG+TGG 0.441858 5.3:-28327220 None:intergenic
ACAACTACAAATTTCATGAA+TGG 0.443610 5.3:+28328318 MS.gene070563:CDS
AGTGACTACTCATTACCATT+TGG 0.444946 5.3:+28328360 MS.gene070563:CDS
CTTGATGAAGTTATCTTACC+AGG 0.449714 5.3:+28326413 MS.gene070563:CDS
AAACAGTGCAAGGCCTAATA+GGG 0.452535 5.3:+28327024 MS.gene070563:CDS
GCTGGATTCTGGAAAGCTAC+AGG 0.462218 5.3:+28327055 MS.gene070563:CDS
TTTCTTTAGGCCAATGCACT+TGG 0.465693 5.3:-28327110 None:intergenic
CCTAATAGGGTAACTGGAGC+TGG 0.468839 5.3:+28327037 MS.gene070563:CDS
ACTGGATGATGCATGAGTTC+AGG 0.474694 5.3:+28327179 MS.gene070563:CDS
GTCTTACTTGGAAGATCCCA+TGG 0.475315 5.3:-28326551 None:intergenic
TTATCATATTGGTTACCAAA+TGG 0.477245 5.3:-28328375 None:intergenic
TAAAGTTTACTCACATTAGC+AGG 0.478939 5.3:-28327256 None:intergenic
ATTGGTGAATTTCAATATTG+GGG 0.479761 5.3:+28328461 MS.gene070563:CDS
TACAAAGGAAGAGCTGCTAA+AGG 0.482478 5.3:+28327145 MS.gene070563:CDS
TGTGTAGAGTTTGCAAGTAC+AGG 0.488055 5.3:+28326956 MS.gene070563:intron
TTTACTCACATTAGCAGGAA+TGG 0.489171 5.3:-28327251 None:intergenic
ACTACAAATTTCATGAATGG+TGG 0.505591 5.3:+28328321 MS.gene070563:CDS
ATATCTATAAATATGATCCA+TGG 0.506117 5.3:+28326534 MS.gene070563:CDS
AGAGGTTCTTGTTTCAGATA+GGG 0.509009 5.3:-28327935 None:intergenic
GATATGGAAGAAAGAAATGA+TGG 0.515202 5.3:+28326383 None:intergenic
GTTGGATGAAACCTAAATCC+TGG 0.518377 5.3:-28326431 None:intergenic
CTACAAATTTCATGAATGGT+GGG 0.522679 5.3:+28328322 MS.gene070563:CDS
AATGCACTTGGAACCTTCTG+AGG 0.523326 5.3:-28327098 None:intergenic
CTAAAGGAATCAAAACTGAC+TGG 0.527746 5.3:+28327161 MS.gene070563:CDS
ATTCAAGAAAACAAATTCTA+CGG 0.534890 5.3:+28327879 MS.gene070563:CDS
TGAAATGGGCAAGTGATGAA+AGG 0.539070 5.3:-28328127 None:intergenic
ATTGACAAAGAATACATCCT+TGG 0.542699 5.3:+28328011 MS.gene070563:CDS
CCAATATGATAATAATGCAT+TGG 0.542771 5.3:+28328386 MS.gene070563:CDS
ATTTCAATATTGGGGATGCA+TGG 0.554967 5.3:+28328469 MS.gene070563:CDS
TCAGAAGGTTCCAAGTGCAT+TGG 0.555187 5.3:+28327100 MS.gene070563:CDS
GTTAAAGTCACCAAGCATTG+AGG 0.557277 5.3:-28328277 None:intergenic
TGTTATTTCCAAATCTACAA+TGG 0.557635 5.3:+28328221 MS.gene070563:CDS
CCAACAAGCTCTTCATCAGT+TGG 0.559889 5.3:-28326449 None:intergenic
AAAAGTGGATCTATGAGAGA+AGG 0.561952 5.3:-28327205 None:intergenic
CATTGTTGTTAGTGTAGAAG+TGG 0.564435 5.3:-28328038 None:intergenic
ATGTCATCATCCTCAATGCT+TGG 0.574915 5.3:+28328267 MS.gene070563:CDS
CAAGTACAGGAGAGAAAGAG+TGG 0.578025 5.3:+28326969 MS.gene070563:CDS
TATCTATAAATATGATCCAT+GGG 0.583366 5.3:+28326535 MS.gene070563:CDS
ACTAATAATGGATTTATAAG+GGG 0.586489 5.3:-28328088 None:intergenic
AAACCTATCTACTCCTCAGA+AGG 0.590506 5.3:+28327085 MS.gene070563:CDS
TTAGTGTTAGATGATTCAAG+TGG 0.596611 5.3:-28328192 None:intergenic
CTGGATTCTGGAAAGCTACA+GGG 0.596618 5.3:+28327056 MS.gene070563:CDS
GTTGTTAGTGTAGAAGTGGT+TGG 0.597687 5.3:-28328034 None:intergenic
CTTGGTTGTTGAATAACTAG+AGG 0.600536 5.3:-28328538 None:intergenic
TCGTATTGATGAACAAGGAT+TGG 0.621831 5.3:+28328443 MS.gene070563:CDS
TACAAATTAAGTGTAACACT+TGG 0.625059 5.3:-28328556 None:intergenic
TTGGTTGTTGAATAACTAGA+GGG 0.629756 5.3:-28328537 None:intergenic
AGTGTAGAAGTGGTTGGCCA+AGG 0.630212 5.3:-28328028 None:intergenic
CTTTAACAAGAAATGTGATG+AGG 0.649442 5.3:+28328293 MS.gene070563:CDS
GAAAATACAGAAACAGTGCA+AGG 0.653407 5.3:+28327014 MS.gene070563:CDS
TAAAGAGAAAGGTTCAACAA+AGG 0.656075 5.3:+28326480 MS.gene070563:CDS
GTGCCTCGTATTGATGAACA+AGG 0.678457 5.3:+28328438 MS.gene070563:CDS
TTGATGAGCTCAATAGACAG+AGG 0.712731 5.3:-28326503 None:intergenic
AATCCTTGTTCATCAATACG+AGG 0.748452 5.3:-28328441 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTATATATAAGTATTTATA+TGG - chr5.3:28326650-28326669 None:intergenic 10.0%
!!! CATAAATATTTTAAATGAAA+TGG + chr5.3:28327532-28327551 MS.gene070563:intron 10.0%
!! AAAAATATACTTAGAATTAG+AGG - chr5.3:28327401-28327420 None:intergenic 15.0%
!! AAAATATACTTAGAATTAGA+GGG - chr5.3:28327400-28327419 None:intergenic 15.0%
!!! AACATTTTTAATGATTTTAG+CGG + chr5.3:28327654-28327673 MS.gene070563:intron 15.0%
!!! ATTATCAATAGAGATATTTT+AGG - chr5.3:28327471-28327490 None:intergenic 15.0%
!! ACATTCACATTAACATTATA+AGG - chr5.3:28328420-28328439 None:intergenic 20.0%
!! ATATCTATAAATATGATCCA+TGG + chr5.3:28326534-28326553 MS.gene070563:CDS 20.0%
!! ATTCAAGAAAACAAATTCTA+CGG + chr5.3:28327879-28327898 MS.gene070563:CDS 20.0%
!! ATTTAGATCTTCATTTGAAA+TGG - chr5.3:28328145-28328164 None:intergenic 20.0%
!! TATCTATAAATATGATCCAT+GGG + chr5.3:28326535-28326554 MS.gene070563:CDS 20.0%
!!! AAGAAGATTGATAATAGTTA+AGG + chr5.3:28326719-28326738 MS.gene070563:intron 20.0%
!!! ACTAATAATGGATTTATAAG+GGG - chr5.3:28328091-28328110 None:intergenic 20.0%
!!! CTCTAATTTTCTTTAATTGT+TGG + chr5.3:28327808-28327827 MS.gene070563:intron 20.0%
!!! GACTAATAATGGATTTATAA+GGG - chr5.3:28328092-28328111 None:intergenic 20.0%
!!! TAACATCTACATCAAAATTT+TGG - chr5.3:28328068-28328087 None:intergenic 20.0%
!!! TTTAGATCTTCATTTGAAAT+GGG - chr5.3:28328144-28328163 None:intergenic 20.0%
! AAAAGACTAAGGATTTCTTT+AGG - chr5.3:28327126-28327145 None:intergenic 25.0%
! ACAACTACAAATTTCATGAA+TGG + chr5.3:28328318-28328337 MS.gene070563:CDS 25.0%
! AGACACTTAAATATCTTTGT+TGG + chr5.3:28326575-28326594 MS.gene070563:intron 25.0%
! ATGCTATAAGCACTTAATTA+AGG - chr5.3:28326618-28326637 None:intergenic 25.0%
! ATTGGTGAATTTCAATATTG+GGG + chr5.3:28328461-28328480 MS.gene070563:CDS 25.0%
! CCAATATGATAATAATGCAT+TGG + chr5.3:28328386-28328405 MS.gene070563:CDS 25.0%
! CCAATGCATTATTATCATAT+TGG - chr5.3:28328389-28328408 None:intergenic 25.0%
! GAAAAGTTTATCTACAACAA+AGG - chr5.3:28327789-28327808 None:intergenic 25.0%
! GATTGGTGAATTTCAATATT+GGG + chr5.3:28328460-28328479 MS.gene070563:CDS 25.0%
! TGCTATAAGCACTTAATTAA+GGG - chr5.3:28326617-28326636 None:intergenic 25.0%
! TTCTATTACAAAAGTCAAAC+TGG + chr5.3:28326674-28326693 MS.gene070563:intron 25.0%
!! ACATGTTGTTTGAACAAAAT+TGG - chr5.3:28327990-28328009 None:intergenic 25.0%
!! CATGTTGTTTGAACAAAATT+GGG - chr5.3:28327989-28328008 None:intergenic 25.0%
!! TTATCATATTGGTTACCAAA+TGG - chr5.3:28328378-28328397 None:intergenic 25.0%
!!! AAATCCTTAGTCTTTTACAA+AGG + chr5.3:28327130-28327149 MS.gene070563:CDS 25.0%
!!! GGACTAATAATGGATTTATA+AGG - chr5.3:28328093-28328112 None:intergenic 25.0%
!!! TGATAATAATGCATTGGTTA+AGG + chr5.3:28328392-28328411 MS.gene070563:CDS 25.0%
!!! TGTTATTTCCAAATCTACAA+TGG + chr5.3:28328221-28328240 MS.gene070563:CDS 25.0%
!!! TTTATTTCTATAAGTTCTCC+AGG - chr5.3:28326840-28326859 None:intergenic 25.0%
AAGTACTTCTTTGGTAAAAG+TGG - chr5.3:28327223-28327242 None:intergenic 30.0%
AAGTTATCTTACCAGGATTT+AGG + chr5.3:28326420-28326439 MS.gene070563:CDS 30.0%
ACACTGTTTAGCATAGTTTA+TGG - chr5.3:28326904-28326923 None:intergenic 30.0%
ACTACAAATTTCATGAATGG+TGG + chr5.3:28328321-28328340 MS.gene070563:CDS 30.0%
ATTGACAAAGAATACATCCT+TGG + chr5.3:28328011-28328030 MS.gene070563:CDS 30.0%
CATTACGATCCTTGATATTA+TGG + chr5.3:28327322-28327341 MS.gene070563:intron 30.0%
CATTGTCAACATATCATAGT+TGG + chr5.3:28327592-28327611 MS.gene070563:intron 30.0%
CTACAAATTTCATGAATGGT+GGG + chr5.3:28328322-28328341 MS.gene070563:CDS 30.0%
CTTTAACAAGAAATGTGATG+AGG + chr5.3:28328293-28328312 MS.gene070563:CDS 30.0%
TAAAGAGAAAGGTTCAACAA+AGG + chr5.3:28326480-28326499 MS.gene070563:CDS 30.0%
TAAAGTTTACTCACATTAGC+AGG - chr5.3:28327259-28327278 None:intergenic 30.0%
TCTTCCTTTGTAAAAGACTA+AGG - chr5.3:28327137-28327156 None:intergenic 30.0%
TGAAACATCCATTGTAGATT+TGG - chr5.3:28328232-28328251 None:intergenic 30.0%
TTAGCATAGTTTATGGAAAG+TGG - chr5.3:28326897-28326916 None:intergenic 30.0%
TTAGTGTTAGATGATTCAAG+TGG - chr5.3:28328195-28328214 None:intergenic 30.0%
TTGGTTGTTGAATAACTAGA+GGG - chr5.3:28328540-28328559 None:intergenic 30.0%
TTGTGTTTGTAAATAGACAG+AGG + chr5.3:28327763-28327782 MS.gene070563:intron 30.0%
TTTAAGTGTCTTGTCTTACT+TGG - chr5.3:28326566-28326585 None:intergenic 30.0%
TTTGTTGAACCTTTCTCTTT+AGG - chr5.3:28326481-28326500 None:intergenic 30.0%
! ATGGAAGTCAAATTTGCTTT+GGG + chr5.3:28328488-28328507 MS.gene070563:CDS 30.0%
! GGATTGGTGAATTTCAATAT+TGG + chr5.3:28328459-28328478 MS.gene070563:CDS 30.0%
! TTGGGTGATTTCTTGATTTT+TGG - chr5.3:28327971-28327990 None:intergenic 30.0%
! TTTCTGTATTTTCTGTCTCT+TGG - chr5.3:28327007-28327026 None:intergenic 30.0%
! TTTTAACATGCAGGAATCAT+GGG + chr5.3:28327843-28327862 MS.gene070563:intron 30.0%
!! GTGTAGTAATGGACTAATAA+TGG - chr5.3:28328103-28328122 None:intergenic 30.0%
!! GTTGTTTTCATAAGTTATCC+TGG + chr5.3:28326819-28326838 MS.gene070563:intron 30.0%
!! TAACTTGTCTTTTAACATGC+AGG + chr5.3:28327834-28327853 MS.gene070563:intron 30.0%
!! TGAAAGGTTTTGTGTAGTAA+TGG - chr5.3:28328114-28328133 None:intergenic 30.0%
!!! ACTTTTACCAAAGAAGTACT+TGG + chr5.3:28327222-28327241 MS.gene070563:CDS 30.0%
!!! ATTTTTGGTTAGCATGTTAG+AGG - chr5.3:28327956-28327975 None:intergenic 30.0%
AAAAGTGGATCTATGAGAGA+AGG - chr5.3:28327208-28327227 None:intergenic 35.0%
AATCCTTGTTCATCAATACG+AGG - chr5.3:28328444-28328463 None:intergenic 35.0%
AGTGACTACTCATTACCATT+TGG + chr5.3:28328360-28328379 MS.gene070563:CDS 35.0%
ATGAAATGGTTGCAATGAGA+TGG + chr5.3:28327546-28327565 MS.gene070563:intron 35.0%
ATTTCAATATTGGGGATGCA+TGG + chr5.3:28328469-28328488 MS.gene070563:CDS 35.0%
CTAAAGGAATCAAAACTGAC+TGG + chr5.3:28327161-28327180 MS.gene070563:CDS 35.0%
CTTGATGAAGTTATCTTACC+AGG + chr5.3:28326413-28326432 MS.gene070563:CDS 35.0%
CTTGGTTGTTGAATAACTAG+AGG - chr5.3:28328541-28328560 None:intergenic 35.0%
GAAAATACAGAAACAGTGCA+AGG + chr5.3:28327014-28327033 MS.gene070563:CDS 35.0%
GACCGATACAAAATTCTGTA+CGG + chr5.3:28327689-28327708 MS.gene070563:intron 35.0%
TAACTAGAGGGAACATCAAT+AGG - chr5.3:28328528-28328547 None:intergenic 35.0%
TGCGATTCTCCATAATATCA+AGG - chr5.3:28327334-28327353 None:intergenic 35.0%
TTTACTCACATTAGCAGGAA+TGG - chr5.3:28327254-28327273 None:intergenic 35.0%
! AGAGGTTCTTGTTTCAGATA+GGG - chr5.3:28327938-28327957 None:intergenic 35.0%
! CACCGTACAGAATTTTGTAT+CGG - chr5.3:28327694-28327713 None:intergenic 35.0%
! CATGGAAGTCAAATTTGCTT+TGG + chr5.3:28328487-28328506 MS.gene070563:CDS 35.0%
! CATTGTTGTTAGTGTAGAAG+TGG - chr5.3:28328041-28328060 None:intergenic 35.0%
! CTTTTAACATGCAGGAATCA+TGG + chr5.3:28327842-28327861 MS.gene070563:intron 35.0%
! GTTTTCTCCAAGTACTTCTT+TGG - chr5.3:28327232-28327251 None:intergenic 35.0%
! TAGAGGTTCTTGTTTCAGAT+AGG - chr5.3:28327939-28327958 None:intergenic 35.0%
! TCGTATTGATGAACAAGGAT+TGG + chr5.3:28328443-28328462 MS.gene070563:CDS 35.0%
! TGGGTTTTACCTAAAGAGAA+AGG + chr5.3:28326469-28326488 MS.gene070563:CDS 35.0%
!! AAGTCAAACTGGTTCGATAT+AGG + chr5.3:28326685-28326704 MS.gene070563:intron 35.0%
AAACAGTGCAAGGCCTAATA+GGG + chr5.3:28327024-28327043 MS.gene070563:CDS 40.0%
AAACCTATCTACTCCTCAGA+AGG + chr5.3:28327085-28327104 MS.gene070563:CDS 40.0%
AAATGGTTGCAATGAGATGG+AGG + chr5.3:28327549-28327568 MS.gene070563:intron 40.0%
AATGGTTGCAATGAGATGGA+GGG + chr5.3:28327550-28327569 MS.gene070563:intron 40.0%
ATGTCATCATCCTCAATGCT+TGG + chr5.3:28328267-28328286 MS.gene070563:CDS 40.0%
GTTGGATGAAACCTAAATCC+TGG - chr5.3:28326434-28326453 None:intergenic 40.0%
GTTGTTAGTGTAGAAGTGGT+TGG - chr5.3:28328037-28328056 None:intergenic 40.0%
TACAAAGGAAGAGCTGCTAA+AGG + chr5.3:28327145-28327164 MS.gene070563:CDS 40.0%
TGAAATGGGCAAGTGATGAA+AGG - chr5.3:28328130-28328149 None:intergenic 40.0%
TGTGTAGAGTTTGCAAGTAC+AGG + chr5.3:28326956-28326975 MS.gene070563:intron 40.0%
TTGATGAGCTCAATAGACAG+AGG - chr5.3:28326506-28326525 None:intergenic 40.0%
TTTCTTTAGGCCAATGCACT+TGG - chr5.3:28327113-28327132 None:intergenic 40.0%
! AAAGAGCTTTGTCTCACTCT+TGG + chr5.3:28327905-28327924 MS.gene070563:CDS 40.0%
! AAGAGCTTTGTCTCACTCTT+GGG + chr5.3:28327906-28327925 MS.gene070563:CDS 40.0%
! AGTTAAGGTGCTAACCTAGT+TGG + chr5.3:28326734-28326753 MS.gene070563:intron 40.0%
! CAACTGATGAAGAGCTTGTT+GGG + chr5.3:28326450-28326469 MS.gene070563:CDS 40.0%
! GTTAAAGTCACCAAGCATTG+AGG - chr5.3:28328280-28328299 None:intergenic 40.0%
! GTTAAGGTGCTAACCTAGTT+GGG + chr5.3:28326735-28326754 MS.gene070563:intron 40.0%
AACTCGTGCGATGTCAACAT+AGG + chr5.3:28327363-28327382 MS.gene070563:intron 45.0%
AATGCACTTGGAACCTTCTG+AGG - chr5.3:28327101-28327120 None:intergenic 45.0%
ACTGGATGATGCATGAGTTC+AGG + chr5.3:28327179-28327198 MS.gene070563:CDS 45.0%
CAAGTACAGGAGAGAAAGAG+TGG + chr5.3:28326969-28326988 MS.gene070563:CDS 45.0%
CCAACAAGCTCTTCATCAGT+TGG - chr5.3:28326452-28326471 None:intergenic 45.0%
CCAACTGATGAAGAGCTTGT+TGG + chr5.3:28326449-28326468 MS.gene070563:CDS 45.0%
GAAACAGTGCAAGGCCTAAT+AGG + chr5.3:28327023-28327042 MS.gene070563:CDS 45.0%
GTCTTACTTGGAAGATCCCA+TGG - chr5.3:28326554-28326573 None:intergenic 45.0%
TCAGAAGGTTCCAAGTGCAT+TGG + chr5.3:28327100-28327119 MS.gene070563:CDS 45.0%
! CTGGATTCTGGAAAGCTACA+GGG + chr5.3:28327056-28327075 MS.gene070563:CDS 45.0%
! GAACCTTCTGAGGAGTAGAT+AGG - chr5.3:28327091-28327110 None:intergenic 45.0%
! GTGCCTCGTATTGATGAACA+AGG + chr5.3:28328438-28328457 MS.gene070563:CDS 45.0%
!!! TTTTTTTTTTTAAAAAACTT+AGG + chr5.3:28327730-28327749 MS.gene070563:intron 5.0%
AACGTGCGAACATCCCAACT+AGG - chr5.3:28326751-28326770 None:intergenic 50.0%
CCAGCTCCAGTTACCCTATT+AGG - chr5.3:28327040-28327059 None:intergenic 50.0%
CCTAATAGGGTAACTGGAGC+TGG + chr5.3:28327037-28327056 MS.gene070563:CDS 50.0%
GCAAGGCCTAATAGGGTAAC+TGG + chr5.3:28327031-28327050 MS.gene070563:CDS 50.0%
! AGTGTAGAAGTGGTTGGCCA+AGG - chr5.3:28328031-28328050 None:intergenic 50.0%
! GCTGGATTCTGGAAAGCTAC+AGG + chr5.3:28327055-28327074 MS.gene070563:CDS 50.0%
GGGTAACTGGAGCTGGATTC+TGG + chr5.3:28327044-28327063 MS.gene070563:CDS 55.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 28326386 28328572 28326386 ID=MS.gene070563
chr5.3 mRNA 28326386 28328572 28326386 ID=MS.gene070563.t1;Parent=MS.gene070563
chr5.3 exon 28326386 28326566 28326386 ID=MS.gene070563.t1.exon1;Parent=MS.gene070563.t1
chr5.3 CDS 28326386 28326566 28326386 ID=cds.MS.gene070563.t1;Parent=MS.gene070563.t1
chr5.3 exon 28326963 28327264 28326963 ID=MS.gene070563.t1.exon2;Parent=MS.gene070563.t1
chr5.3 CDS 28326963 28327264 28326963 ID=cds.MS.gene070563.t1;Parent=MS.gene070563.t1
chr5.3 exon 28327856 28328572 28327856 ID=MS.gene070563.t1.exon3;Parent=MS.gene070563.t1
chr5.3 CDS 28327856 28328572 28327856 ID=cds.MS.gene070563.t1;Parent=MS.gene070563.t1
Gene Sequence

>MS.gene070563

ATGGAAGAAAGAAATGATGGTGAAAAACTTGATGAAGTTATCTTACCAGGATTTAGGTTTCATCCAACTGATGAAGAGCTTGTTGGGTTTTACCTAAAGAGAAAGGTTCAACAAAGGCCTCTGTCTATTGAGCTCATCAAGCAGCTTGATATCTATAAATATGATCCATGGGATCTTCCAAGTAAGACAAGACACTTAAATATCTTTGTTGGTTCTTCACATATATAACCCTTAATTAAGTGCTTATAGCATACACGCTTACCATATAAATACTTATATATAAGATATTTCTATTACAAAAGTCAAACTGGTTCGATATAGGCTTGCATACTAAAGAAGATTGATAATAGTTAAGGTGCTAACCTAGTTGGGATGTTCGCACGTTACATTGATGTTTTGCATGTCTAACTTTTATCAACAAAAGAAGTCATAAGTTGTTTTCATAAGTTATCCTGGAGAACTTATAGAAATAAACGAAAAAAAGTTTAAGACTTGTCATAAGCAATTTCCACTTTCCATAAACTATGCTAAACAGTGTCACAAGTACTAATATGTTTGTATGATTGTATGTGTGTAGAGTTTGCAAGTACAGGAGAGAAAGAGTGGTATTTCTACTGTCCAAGAGACAGAAAATACAGAAACAGTGCAAGGCCTAATAGGGTAACTGGAGCTGGATTCTGGAAAGCTACAGGGACAGATAAACCTATCTACTCCTCAGAAGGTTCCAAGTGCATTGGCCTAAAGAAATCCTTAGTCTTTTACAAAGGAAGAGCTGCTAAAGGAATCAAAACTGACTGGATGATGCATGAGTTCAGGCTACCTTCTCTCATAGATCCACTTTTACCAAAGAAGTACTTGGAGAAAACCATTCCTGCTAATGTGAGTAAACTTTATCATTATCTTAGCAAATTTAAGTTATCATTTTCAATGCAATCACATTACGATCCTTGATATTATGGAGAATCGCAGTCAAATGTAACTCGTGCGATGTCAACATAGGTTGCATGAACTCCCTCTAATTCTAAGTATATTTTTATGAAAATGATTAGTCTATGTTGAAATATGTAGTTAAAAATTGTATGCCTAAAATATCTCTATTGATAATAAATGTTGTATTTGTATTCTAAAGTGAGAAATAATTTGAGACATAAATATTTTAAATGAAATGGTTGCAATGAGATGGAGGGAGTATCAAAAACTTGTTGACATTGTCAACATATCATAGTTGGTCATATGTATGACTTTAAAAATAGTTATGAATAAAGTCAAACATTTTTAATGATTTTAGCGGTTATAATTGATTGACCGATACAAAATTCTGTACGGTGTGATGTATATGAATTTTTTTTTTTTTTAAAAAACTTAGGTTTTAATTGTTTGTGTTTGTAAATAGACAGAGGCCTTTGTTGTAGATAAACTTTTCTCTAATTTTCTTTAATTGTTGGTTTTAACTTGTCTTTTAACATGCAGGAATCATGGGCTATCTGTAGAATATTCAAGAAAACAAATTCTACGGCTCAAAGAGCTTTGTCTCACTCTTGGGTTTCTTCCCTATCTGAAACAAGAACCTCTAACATGCTAACCAAAAATCAAGAAATCACCCAATTTTGTTCAAACAACATGTCATTGACAAAGAATACATCCTTGGCCAACCACTTCTACACTAACAACAATGATAGCCAAAATTTTGATGTAGATGTTACCCCTTATAAATCCATTATTAGTCCATTACTACACAAAACCTTTCATCACTTGCCCATTTCAAATGAAGATCTAAATACAAACTTGATATTCTCATCATCATCTCCACTTGAATCATCTAACACTAATAATAATGTTATTTCCAAATCTACAATGGATGTTTCATCAATGTTGTTGAATATGTCATCATCCTCAATGCTTGGTGACTTTAACAAGAAATGTGATGAGGTTACAACTACAAATTTCATGAATGGTGGGTTGCAAGAGCAATTTAGTGACTACTCATTACCATTTGGTAACCAATATGATAATAATGCATTGGTTAAGGTACCTTATAATGTTAATGTGAATGTGCCTCGTATTGATGAACAAGGATTGGTGAATTTCAATATTGGGGATGCATGGAAGTCAAATTTGCTTTGGGATACTTCATTTTGTCCTATTGATGTTCCCTCTAGTTATTCAACAACCAAGTGTTACACTTAA
Protein sequence

>MS.gene070563.t1

MEERNDGEKLDEVILPGFRFHPTDEELVGFYLKRKVQQRPLSIELIKQLDIYKYDPWDLPKFASTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDKPIYSSEGSKCIGLKKSLVFYKGRAAKGIKTDWMMHEFRLPSLIDPLLPKKYLEKTIPANESWAICRIFKKTNSTAQRALSHSWVSSLSETRTSNMLTKNQEITQFCSNNMSLTKNTSLANHFYTNNNDSQNFDVDVTPYKSIISPLLHKTFHHLPISNEDLNTNLIFSSSSPLESSNTNNNVISKSTMDVSSMLLNMSSSSMLGDFNKKCDEVTTTNFMNGGLQEQFSDYSLPFGNQYDNNALVKVPYNVNVNVPRIDEQGLVNFNIGDAWKSNLLWDTSFCPIDVPSSYSTTKCYT