Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070606.t1 | PNX89523.1 | 40 | 95 | 56 | 1 | 7 | 101 | 2 | 95 | 6.20E-08 | 68.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070606.t1 | A0A2K3MFE8 | 40.0 | 95 | 56 | 1 | 7 | 101 | 2 | 95 | 4.5e-08 | 68.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene070606.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTAAAAAATAATAATTGA+TGG | - | 37908:23109-23128 | MS.gene070606:CDS | 10.0% |
| !! | ACTAAAAAATAATAATTGAT+GGG | - | 37908:23110-23129 | MS.gene070606:CDS | 10.0% |
| !! | TATTTAAGAAGAAAAAAAAA+CGG | + | 37908:22166-22185 | None:intergenic | 10.0% |
| !!! | TATATTATTATTTTAGTTGT+TGG | + | 37908:22797-22816 | None:intergenic | 10.0% |
| !!! | TTTTTATAAAAAAAATCGAT+AGG | - | 37908:23037-23056 | MS.gene070606:CDS | 10.0% |
| !! | AAAATAACTCACAATATTAA+CGG | + | 37908:23021-23040 | None:intergenic | 15.0% |
| !! | AAAATTTGCAATACATTTAT+AGG | - | 37908:22485-22504 | MS.gene070606:CDS | 15.0% |
| !! | AAATTTGCAATACATTTATA+GGG | - | 37908:22486-22505 | MS.gene070606:CDS | 15.0% |
| !! | ATAAGAAATTGCAAAAAATT+TGG | - | 37908:23527-23546 | MS.gene070606:intron | 15.0% |
| !! | GGTATTTAATTAGATTAAAT+CGG | - | 37908:22748-22767 | MS.gene070606:intron | 15.0% |
| !! | TAAGAAATTGCAAAAAATTT+GGG | - | 37908:23528-23547 | MS.gene070606:intron | 15.0% |
| !! | TGTTAAGATTAAATTTGTAT+AGG | - | 37908:22727-22746 | MS.gene070606:intron | 15.0% |
| !!! | GAATATATTAAGCAAATTTT+TGG | + | 37908:23182-23201 | None:intergenic | 15.0% |
| !!! | TTATAGATTTTCAATACTTT+TGG | - | 37908:23715-23734 | MS.gene070606:intron | 15.0% |
| !! | AAAAAAAAAAAGAGAAGAAC+CGG | - | 37908:23333-23352 | MS.gene070606:intron | 20.0% |
| !! | AATTTGCAATACATTTATAG+GGG | - | 37908:22487-22506 | MS.gene070606:CDS | 20.0% |
| !! | CTTTATACAGTTATTTATTG+TGG | - | 37908:24637-24656 | MS.gene070606:intron | 20.0% |
| !! | GGTTTATATAAGAAATTCAA+GGG | - | 37908:22570-22589 | MS.gene070606:CDS | 20.0% |
| !! | GTCTATTAAATTATGTTTGT+TGG | + | 37908:22874-22893 | None:intergenic | 20.0% |
| !! | GTTTATATAAGAAATTCAAG+GGG | - | 37908:22571-22590 | MS.gene070606:CDS | 20.0% |
| !! | TAATTATAACCATTGTTCTA+AGG | + | 37908:23587-23606 | None:intergenic | 20.0% |
| !! | TATATAAACCCCTATAAATT+GGG | + | 37908:22560-22579 | None:intergenic | 20.0% |
| !! | TATTGAAAATCTATAAGCAA+AGG | + | 37908:23711-23730 | None:intergenic | 20.0% |
| !! | TTAACGTTTAATACTTTACA+AGG | + | 37908:23069-23088 | None:intergenic | 20.0% |
| !! | TTATATAAACCCCTATAAAT+TGG | + | 37908:22561-22580 | None:intergenic | 20.0% |
| !!! | TATTAAACGTTAATTTTGTG+AGG | - | 37908:23076-23095 | MS.gene070606:CDS | 20.0% |
| !!! | TTTACCATAGTTTTAAAACT+CGG | - | 37908:22595-22614 | MS.gene070606:CDS | 20.0% |
| ! | AAAGAAATTGCCCAATTTAT+AGG | - | 37908:22547-22566 | MS.gene070606:CDS | 25.0% |
| ! | AAGAAATTGCCCAATTTATA+GGG | - | 37908:22548-22567 | MS.gene070606:CDS | 25.0% |
| ! | ACACAACAAAATACAAAGAA+TGG | + | 37908:22422-22441 | None:intergenic | 25.0% |
| ! | ATAAATAACTGTATAAAGCG+TGG | + | 37908:24635-24654 | None:intergenic | 25.0% |
| ! | GGGTTTATATAAGAAATTCA+AGG | - | 37908:22569-22588 | MS.gene070606:CDS | 25.0% |
| ! | GTGTATGAGAAACAAAATTA+TGG | + | 37908:22397-22416 | None:intergenic | 25.0% |
| ! | TACAGTTATTTATTGTGGTT+TGG | - | 37908:24642-24661 | MS.gene070606:intron | 25.0% |
| ! | TATTAAGTGGAATGAAAAAC+CGG | - | 37908:24811-24830 | MS.gene070606:intron | 25.0% |
| ! | TTGTAGATTCCCTTAAAAAA+GGG | - | 37908:22323-22342 | MS.gene070606:CDS | 25.0% |
| !!! | TATTTTTACGAACGTTTCAA+AGG | - | 37908:23796-23815 | MS.gene070606:intron | 25.0% |
| !!! | TTAGGAAGTTGTTTCTTATT+GGG | - | 37908:23247-23266 | MS.gene070606:intron | 25.0% |
| AAACGTTCGTAAAAATACCA+TGG | + | 37908:23793-23812 | None:intergenic | 30.0% | |
| AAATTGCAAAAAATTTGGGC+CGG | - | 37908:23532-23551 | MS.gene070606:intron | 30.0% | |
| AACGTTCGTAAAAATACCAT+GGG | + | 37908:23792-23811 | None:intergenic | 30.0% | |
| AGAAATTGCCCAATTTATAG+GGG | - | 37908:22549-22568 | MS.gene070606:CDS | 30.0% | |
| AGTATCCAATCGATATTAAG+TGG | - | 37908:24798-24817 | MS.gene070606:intron | 30.0% | |
| CATCATTAATTGGATTTGAC+GGG | + | 37908:24287-24306 | None:intergenic | 30.0% | |
| CCTTCAAAAAAGAGAAAAAC+TGG | + | 37908:23610-23629 | None:intergenic | 30.0% | |
| GCATCATTAATTGGATTTGA+CGG | + | 37908:24288-24307 | None:intergenic | 30.0% | |
| GTTGTAGATTCCCTTAAAAA+AGG | - | 37908:22322-22341 | MS.gene070606:CDS | 30.0% | |
| TAGATTAAATCGGATTGAAC+CGG | - | 37908:22758-22777 | MS.gene070606:intron | 30.0% | |
| TCATTCCACTTAATATCGAT+TGG | + | 37908:24806-24825 | None:intergenic | 30.0% | |
| TGTTTGTATTCTGTAGCTTA+CGG | - | 37908:23759-23778 | MS.gene070606:intron | 30.0% | |
| TTACAAAAAATGCCACAGAT+GGG | + | 37908:23291-23310 | None:intergenic | 30.0% | |
| ! | CAGCAGCATTAATTTGAAAT+TGG | + | 37908:24167-24186 | None:intergenic | 30.0% |
| ! | TAATATCGATTGGATACTCA+CGG | + | 37908:24796-24815 | None:intergenic | 30.0% |
| ! | TTTCGATATTGGTGATAATG+AGG | - | 37908:24458-24477 | MS.gene070606:intron | 30.0% |
| !! | GTTAGGAAGTTGTTTCTTAT+TGG | - | 37908:23246-23265 | MS.gene070606:intron | 30.0% |
| !!! | AATCCCATAGTTTTGAAACT+CGG | + | 37908:23504-23523 | None:intergenic | 30.0% |
| !!! | ATTGCAAATTTTTTTTCGCC+CGG | + | 37908:22477-22496 | None:intergenic | 30.0% |
| !!! | CCAGTTTTTCTCTTTTTTGA+AGG | - | 37908:23607-23626 | MS.gene070606:intron | 30.0% |
| !!! | TTTTTTTTACCCTGCATATG+CGG | + | 37908:22370-22389 | None:intergenic | 30.0% |
| AAAACCGGATAAAGCTACAT+CGG | - | 37908:24826-24845 | MS.gene070606:intron | 35.0% | |
| AAAATCTATAAGCAAAGGCG+AGG | + | 37908:23706-23725 | None:intergenic | 35.0% | |
| AAAATGAACAAGCACTTCAG+TGG | - | 37908:23224-23243 | MS.gene070606:intron | 35.0% | |
| AAATAAATCAGCAGCAGCAA+CGG | + | 37908:24232-24251 | None:intergenic | 35.0% | |
| AAATCTATAAGCAAAGGCGA+GGG | + | 37908:23705-23724 | None:intergenic | 35.0% | |
| AATCGTAGGTTTAGACCTAA+TGG | + | 37908:23949-23968 | None:intergenic | 35.0% | |
| AATTAATGCTGCTGCTATTG+TGG | - | 37908:24173-24192 | MS.gene070606:intron | 35.0% | |
| AGGTAACTAATCGTCAATTG+AGG | - | 37908:24025-24044 | MS.gene070606:intron | 35.0% | |
| ATATCACCATCATCAGGAAT+GGG | + | 37908:24324-24343 | None:intergenic | 35.0% | |
| ATTAATGCTGCTGCTATTGT+GGG | - | 37908:24174-24193 | MS.gene070606:intron | 35.0% | |
| GATCATTATGAGCAACCATT+AGG | - | 37908:23931-23950 | MS.gene070606:intron | 35.0% | |
| GGAATCTACAACTACAACAT+TGG | + | 37908:22314-22333 | None:intergenic | 35.0% | |
| GTCAAATAGAGCATAGAGTT+TGG | - | 37908:23818-23837 | MS.gene070606:intron | 35.0% | |
| GTTACAAAAAATGCCACAGA+TGG | + | 37908:23292-23311 | None:intergenic | 35.0% | |
| TAAAACATGTGTCTCCAACT+GGG | + | 37908:24541-24560 | None:intergenic | 35.0% | |
| TTAAAACATGTGTCTCCAAC+TGG | + | 37908:24542-24561 | None:intergenic | 35.0% | |
| TTATCACCAATATCGAAAGC+AGG | + | 37908:24456-24475 | None:intergenic | 35.0% | |
| ! | AAGCTACATCGGTATTTTTC+AGG | - | 37908:24837-24856 | MS.gene070606:intron | 35.0% |
| ! | AGCATCGCATTTTGAATCAT+TGG | + | 37908:22012-22031 | None:intergenic | 35.0% |
| ! | AGCTACATCGGTATTTTTCA+GGG | - | 37908:24838-24857 | MS.gene070606:intron | 35.0% |
| ! | CAAAGTATCTAAATGTACGC+AGG | + | 37908:24089-24108 | None:intergenic | 35.0% |
| ! | TCTAGGTTTGGAGTATGTTA+CGG | - | 37908:23859-23878 | MS.gene070606:intron | 35.0% |
| ! | TTGTACCAGCAAAATTTGCT+CGG | - | 37908:24717-24736 | MS.gene070606:intron | 35.0% |
| !! | AATACCGATGTAGCTTTATC+CGG | + | 37908:24833-24852 | None:intergenic | 35.0% |
| !! | GAAGTTGTTTCTTATTGGGT+GGG | - | 37908:23251-23270 | MS.gene070606:intron | 35.0% |
| !! | GTATTTTGTTGTGTTGTGAG+TGG | - | 37908:22428-22447 | MS.gene070606:CDS | 35.0% |
| !! | TAATTTCTGGGATGATGATG+AGG | - | 37908:24428-24447 | MS.gene070606:intron | 35.0% |
| !!! | CATAGTTTTAAAACTCGGCT+CGG | - | 37908:22600-22619 | MS.gene070606:CDS | 35.0% |
| !!! | TTGCAAATTTTTTTTCGCCC+GGG | + | 37908:22476-22495 | None:intergenic | 35.0% |
| !!! | TTTTTTTACCCTGCATATGC+GGG | + | 37908:22369-22388 | None:intergenic | 35.0% |
| AAAACATGTGTCTCCAACTG+GGG | + | 37908:24540-24559 | None:intergenic | 40.0% | |
| AAACATCCCGTTATCGTCAT+AGG | + | 37908:23974-23993 | None:intergenic | 40.0% | |
| AATGCAACATCCACCAGATA+TGG | + | 37908:22081-22100 | None:intergenic | 40.0% | |
| ACTACCATATCACCATCATC+AGG | + | 37908:24330-24349 | None:intergenic | 40.0% | |
| AGAGAGAACAGATTTGTGGA+AGG | - | 37908:24881-24900 | MS.gene070606:intron | 40.0% | |
| ATTCACTCTTGACATGGATG+AGG | - | 37908:24005-24024 | MS.gene070606:intron | 40.0% | |
| CATATCACCATCATCAGGAA+TGG | + | 37908:24325-24344 | None:intergenic | 40.0% | |
| CGATTGACCTATGACGATAA+CGG | - | 37908:23964-23983 | MS.gene070606:intron | 40.0% | |
| CGGTCAAACTCGGTAAAAAT+CGG | + | 37908:23384-23403 | None:intergenic | 40.0% | |
| CGTTAGAGAGAACAGATTTG+TGG | - | 37908:24877-24896 | MS.gene070606:intron | 40.0% | |
| GAGCCGAGTTTCAAAACTAT+GGG | - | 37908:23498-23517 | MS.gene070606:intron | 40.0% | |
| GAGTTGTGCGCATCATTAAT+TGG | + | 37908:24297-24316 | None:intergenic | 40.0% | |
| GATTGACCTATGACGATAAC+GGG | - | 37908:23965-23984 | MS.gene070606:intron | 40.0% | |
| GTATGTTACGGAGAGATCAA+TGG | - | 37908:23871-23890 | MS.gene070606:intron | 40.0% | |
| GTTGCTCATAATGATCAAGC+AGG | + | 37908:23927-23946 | None:intergenic | 40.0% | |
| TATCGTCATAGGTCAATCGT+AGG | + | 37908:23963-23982 | None:intergenic | 40.0% | |
| TATGGATGTCGAAATGGATG+TGG | - | 37908:24488-24507 | MS.gene070606:intron | 40.0% | |
| TCAGAACGTGGCTAATTTCT+GGG | - | 37908:24416-24435 | MS.gene070606:intron | 40.0% | |
| TCATCCATGTCAAGAGTGAA+TGG | + | 37908:24006-24025 | None:intergenic | 40.0% | |
| TTCAGAACGTGGCTAATTTC+TGG | - | 37908:24415-24434 | MS.gene070606:intron | 40.0% | |
| TTTATTTCCAGCAGTTCCAC+CGG | - | 37908:24245-24264 | MS.gene070606:intron | 40.0% | |
| ! | AATTAGCCACGTTCTGAATC+TGG | + | 37908:24413-24432 | None:intergenic | 40.0% |
| ! | ACCAGATATGGAAGTGTATC+GGG | + | 37908:22069-22088 | None:intergenic | 40.0% |
| ! | AGAGCATAGAGTTTGGTTTC+AGG | - | 37908:23825-23844 | MS.gene070606:intron | 40.0% |
| ! | ATTAGCCACGTTCTGAATCT+GGG | + | 37908:24412-24431 | None:intergenic | 40.0% |
| ! | CACCAGATATGGAAGTGTAT+CGG | + | 37908:22070-22089 | None:intergenic | 40.0% |
| ! | CCATGATTTTTATGAAGCCC+GGG | - | 37908:22456-22475 | MS.gene070606:CDS | 40.0% |
| ! | CGATATTGGTGATAATGAGG+AGG | - | 37908:24461-24480 | MS.gene070606:intron | 40.0% |
| ! | CGATTTTTACCGAGTTTGAC+CGG | - | 37908:23382-23401 | MS.gene070606:intron | 40.0% |
| ! | GCCATGATTTTTATGAAGCC+CGG | - | 37908:22455-22474 | MS.gene070606:CDS | 40.0% |
| ! | TGATAATGAGGAGGCTGATA+TGG | - | 37908:24470-24489 | MS.gene070606:intron | 40.0% |
| ! | TTTGGTTTCAGGATACCAGA+GGG | - | 37908:23836-23855 | MS.gene070606:intron | 40.0% |
| !! | ATAACCATTGTTCTAAGGCC+CGG | + | 37908:23582-23601 | None:intergenic | 40.0% |
| !! | CATTCCTGATGATGGTGATA+TGG | - | 37908:24323-24342 | MS.gene070606:intron | 40.0% |
| !! | GATGACTCGGTTAGATAACT+CGG | - | 37908:22704-22723 | MS.gene070606:intron | 40.0% |
| !! | GCTACATCGGTATTTTTCAG+GGG | - | 37908:24839-24858 | MS.gene070606:intron | 40.0% |
| !! | GGAAGTTGTTTCTTATTGGG+TGG | - | 37908:23250-23269 | MS.gene070606:intron | 40.0% |
| !! | TGCATGCATTGATTCATCAG+TGG | - | 37908:22100-22119 | MS.gene070606:CDS | 40.0% |
| !! | TTTTGTTGTGTTGTGAGTGG+CGG | - | 37908:22431-22450 | MS.gene070606:CDS | 40.0% |
| !!! | CGAGCCGAGTTTTAAAACTA+TGG | + | 37908:22602-22621 | None:intergenic | 40.0% |
| AATGGATGTGGTAGATGCTG+AGG | - | 37908:24500-24519 | MS.gene070606:intron | 45.0% | |
| ACAAGTTCAACTCCCATCTG+TGG | - | 37908:23276-23295 | MS.gene070606:intron | 45.0% | |
| AGACGAAGACGAAGATGAGT+CGG | + | 37908:24115-24134 | None:intergenic | 45.0% | |
| AGTCATCCGATTCTGTCATG+CGG | + | 37908:22691-22710 | None:intergenic | 45.0% | |
| CATGACAGAATCGGATGACT+CGG | - | 37908:22691-22710 | MS.gene070606:intron | 45.0% | |
| CATGGTGAAATGCAGCAACA+TGG | - | 37908:24575-24594 | MS.gene070606:intron | 45.0% | |
| CCCGGGCTTCATAAAAATCA+TGG | + | 37908:22459-22478 | None:intergenic | 45.0% | |
| CGAGCCGAGTTTCAAAACTA+TGG | - | 37908:23497-23516 | MS.gene070606:intron | 45.0% | |
| CGATACACTTCCATATCTGG+TGG | - | 37908:22068-22087 | MS.gene070606:CDS | 45.0% | |
| CGATGTTGAATACCCTCCTT+TGG | + | 37908:21948-21967 | None:intergenic | 45.0% | |
| CTCGGTAAAAATCGGTGACT+CGG | + | 37908:23376-23395 | None:intergenic | 45.0% | |
| GAACAAGCACTTCAGTGGTT+AGG | - | 37908:23229-23248 | MS.gene070606:intron | 45.0% | |
| GAGGAACCTGCTTTCGATAT+TGG | - | 37908:24447-24466 | MS.gene070606:intron | 45.0% | |
| GCTTCCATTCACTCTTGACA+TGG | - | 37908:23999-24018 | MS.gene070606:intron | 45.0% | |
| GGAACTATGACCATAGCTCA+AGG | - | 37908:24046-24065 | MS.gene070606:intron | 45.0% | |
| GGCTGATATGGATGTCGAAA+TGG | - | 37908:24482-24501 | MS.gene070606:intron | 45.0% | |
| GTTGAACCGCATGACAGAAT+CGG | - | 37908:22682-22701 | MS.gene070606:intron | 45.0% | |
| TCCCGATACACTTCCATATC+TGG | - | 37908:22065-22084 | MS.gene070606:CDS | 45.0% | |
| TCCCTTAAAAAAGGGCAACC+CGG | - | 37908:22331-22350 | MS.gene070606:CDS | 45.0% | |
| TCGTCTTCGTCATCTGATGA+TGG | - | 37908:24141-24160 | MS.gene070606:intron | 45.0% | |
| TGACATGCAACCTTGAGCTA+TGG | + | 37908:24059-24078 | None:intergenic | 45.0% | |
| TGAGTCGATGGTTGAACCAT+CGG | - | 37908:22652-22671 | MS.gene070606:intron | 45.0% | |
| TGTTACGGAGAGATCAATGG+CGG | - | 37908:23874-23893 | MS.gene070606:intron | 45.0% | |
| TGTTGGAGTAATCGAGTCAC+CGG | + | 37908:22780-22799 | None:intergenic | 45.0% | |
| TTATTTCCAGCAGTTCCACC+GGG | - | 37908:24246-24265 | MS.gene070606:intron | 45.0% | |
| ! | AAATTTGCTCGGCGAGCATT+TGG | - | 37908:24728-24747 | MS.gene070606:intron | 45.0% |
| ! | AACCGGTTCAACCCATAACT+CGG | - | 37908:23350-23369 | MS.gene070606:intron | 45.0% |
| ! | AATTTGCTCGGCGAGCATTT+GGG | - | 37908:24729-24748 | MS.gene070606:intron | 45.0% |
| ! | ACAGATTTGTGGAAGGCACA+AGG | - | 37908:24888-24907 | MS.gene070606:intron | 45.0% |
| ! | CAGATTTGTGGAAGGCACAA+GGG | - | 37908:24889-24908 | MS.gene070606:intron | 45.0% |
| ! | GAAGATTAGAGCACCATACC+TGG | + | 37908:21984-22003 | None:intergenic | 45.0% |
| ! | GGATTTTGTTCTTCCACCAC+TGG | + | 37908:24369-24388 | None:intergenic | 45.0% |
| ! | GTTTGGTTTCAGGATACCAG+AGG | - | 37908:23835-23854 | MS.gene070606:intron | 45.0% |
| ! | TAGAGCACCATACCTGGTTT+GGG | + | 37908:21978-21997 | None:intergenic | 45.0% |
| ! | TATCGATTGGATACTCACGG+TGG | + | 37908:24793-24812 | None:intergenic | 45.0% |
| ! | TTAGAGCACCATACCTGGTT+TGG | + | 37908:21979-21998 | None:intergenic | 45.0% |
| ! | TTTAACGCTTGCTGCGTACA+TGG | - | 37908:24557-24576 | MS.gene070606:intron | 45.0% |
| !! | AAGGAGGGTATTCAACATCG+CGG | - | 37908:21948-21967 | MS.gene070606:CDS | 45.0% |
| !! | GTTGCTGTTGGTGGTGATAA+TGG | - | 37908:24204-24223 | MS.gene070606:intron | 45.0% |
| !!! | ACATCGGTATTTTTCAGGGG+CGG | - | 37908:24842-24861 | MS.gene070606:intron | 45.0% |
| !!! | ACCGGGTTGCCCTTTTTTAA+GGG | + | 37908:22335-22354 | None:intergenic | 45.0% |
| !!! | TTTTGAAACTCGGCTCGAAC+CGG | + | 37908:23494-23513 | None:intergenic | 45.0% |
| !!! | TTATAATTATATTTTTGTTA+GGG | - | 37908:22962-22981 | MS.gene070606:CDS | 5.0% |
| !!! | TTTATAATTATATTTTTGTT+AGG | - | 37908:22961-22980 | MS.gene070606:CDS | 5.0% |
| AAAAAATTTGGGCCGGAGCC+CGG | - | 37908:23539-23558 | MS.gene070606:intron | 50.0% | |
| ACTCACGGTGGAACTCATCT+CGG | + | 37908:24781-24800 | None:intergenic | 50.0% | |
| AGTAGCCCAGATTCAGAACG+TGG | - | 37908:24404-24423 | MS.gene070606:intron | 50.0% | |
| CTCATCTCGGATCGTGATGA+AGG | + | 37908:24768-24787 | None:intergenic | 50.0% | |
| GAGTCGATGGTTGAACCATC+GGG | - | 37908:22653-22672 | MS.gene070606:intron | 50.0% | |
| GATACCAGAGGGTCTAGGTT+TGG | - | 37908:23847-23866 | MS.gene070606:intron | 50.0% | |
| GTAGATGCTGAGGATGCACA+TGG | - | 37908:24510-24529 | MS.gene070606:intron | 50.0% | |
| GTTCGAGCATACCTTCGGAT+CGG | + | 37908:23431-23450 | None:intergenic | 50.0% | |
| GTTCTTCCACCACTGGTACT+GGG | + | 37908:24362-24381 | None:intergenic | 50.0% | |
| TACTCCAAACCTAGACCCTC+TGG | + | 37908:23854-23873 | None:intergenic | 50.0% | |
| TCACCATCATCAGGAATGGG+AGG | + | 37908:24321-24340 | None:intergenic | 50.0% | |
| TCTCCTCCCATTCCTGATGA+TGG | - | 37908:24315-24334 | MS.gene070606:intron | 50.0% | |
| TCTCGGATCGTGATGAAGGT+TGG | + | 37908:24764-24783 | None:intergenic | 50.0% | |
| TGGTTGAACCATCGGGTCAT+TGG | - | 37908:22660-22679 | MS.gene070606:intron | 50.0% | |
| TGTTCTTCCACCACTGGTAC+TGG | + | 37908:24363-24382 | None:intergenic | 50.0% | |
| TTCAGGATACCAGAGGGTCT+AGG | - | 37908:23842-23861 | MS.gene070606:intron | 50.0% | |
| !! | GACTGGTTCGAGCATACCTT+CGG | + | 37908:23436-23455 | None:intergenic | 50.0% |
| !!! | CACCGGGTTGCCCTTTTTTA+AGG | + | 37908:22336-22355 | None:intergenic | 50.0% |
| !!! | GGTATTTTTCAGGGGCGGTT+GGG | - | 37908:24847-24866 | MS.gene070606:intron | 50.0% |
| !!! | GTATTTTTCAGGGGCGGTTG+GGG | - | 37908:24848-24867 | MS.gene070606:intron | 50.0% |
| AAAAATTTGGGCCGGAGCCC+GGG | - | 37908:23540-23559 | MS.gene070606:intron | 55.0% | |
| ACTAGAGCTCCCGCATATGC+AGG | - | 37908:22357-22376 | MS.gene070606:CDS | 55.0% | |
| CGGTCAACCCAAACCAGGTA+TGG | - | 37908:21968-21987 | MS.gene070606:CDS | 55.0% | |
| CGGTTCAACCAATGACCCGA+TGG | + | 37908:22671-22690 | None:intergenic | 55.0% | |
| CTAGAGCTCCCGCATATGCA+GGG | - | 37908:22358-22377 | MS.gene070606:CDS | 55.0% | |
| CTGAATCTGGGCTACTGCAG+CGG | + | 37908:24400-24419 | None:intergenic | 55.0% | |
| GCACTGAGTCACTGAGTCGA+TGG | - | 37908:22640-22659 | MS.gene070606:intron | 55.0% | |
| GCTGCTGCTATTGTGGGTTC+TGG | - | 37908:24180-24199 | MS.gene070606:intron | 55.0% | |
| GGCGGTGGTTGCTTCTATTC+AGG | - | 37908:23892-23911 | MS.gene070606:intron | 55.0% | |
| GTTCCACCGGGTTTCGAAGT+AGG | - | 37908:24258-24277 | MS.gene070606:intron | 55.0% | |
| TACGGAGAGATCAATGGCGG+TGG | - | 37908:23877-23896 | MS.gene070606:intron | 55.0% | |
| TGCACATGGCAATCCCCAGT+TGG | - | 37908:24524-24543 | MS.gene070606:intron | 55.0% | |
| TGTTCCTGACCCAGTACCAG+TGG | - | 37908:24350-24369 | MS.gene070606:intron | 55.0% | |
| ! | GCTCGCCGAGCAAATTTTGC+TGG | + | 37908:24725-24744 | None:intergenic | 55.0% |
| ! | GGCCGAGTTATGGGTTGAAC+CGG | + | 37908:23355-23374 | None:intergenic | 55.0% |
| !! | GGTTCTGGTGTTGCTGTTGG+TGG | - | 37908:24195-24214 | MS.gene070606:intron | 55.0% |
| !! | GTGGGTTCTGGTGTTGCTGT+TGG | - | 37908:24192-24211 | MS.gene070606:intron | 55.0% |
| !!! | CGGTATTTTTCAGGGGCGGT+TGG | - | 37908:24846-24865 | MS.gene070606:intron | 55.0% |
| AACTGTCCTGCACGTGAGGC+AGG | - | 37908:24940-24959 | MS.gene070606:CDS | 60.0% | |
| ACCCAACTGTCCTGCACGTG+AGG | - | 37908:24936-24955 | MS.gene070606:CDS | 60.0% | |
| AGCTTACGGCTCGTGTCCCA+TGG | - | 37908:23773-23792 | MS.gene070606:intron | 60.0% | |
| CAACTGCATGGCCGATCCGA+AGG | - | 37908:23417-23436 | MS.gene070606:intron | 60.0% | |
| CATCGCGGTCAACCCAAACC+AGG | - | 37908:21963-21982 | MS.gene070606:CDS | 60.0% | |
| CCACCGGGTTTCGAAGTAGG+AGG | - | 37908:24261-24280 | MS.gene070606:intron | 60.0% | |
| CCTCCTACTTCGAAACCCGG+TGG | + | 37908:24264-24283 | None:intergenic | 60.0% | |
| CGGCGAGAACCGGTCAAACT+CGG | + | 37908:23394-23413 | None:intergenic | 60.0% | |
| CTCGCCGGGCCTTAGAACAA+TGG | - | 37908:23575-23594 | MS.gene070606:intron | 60.0% | |
| CTTCGGATCGGCCATGCAGT+TGG | + | 37908:23419-23438 | None:intergenic | 60.0% | |
| GATCGGCCATGCAGTTGGCT+CGG | + | 37908:23414-23433 | None:intergenic | 60.0% | |
| GCACGTGAGGCAGGTCGTTA+TGG | - | 37908:24949-24968 | MS.gene070606:CDS | 60.0% | |
| GCCTCACGTGCAGGACAGTT+GGG | + | 37908:24940-24959 | None:intergenic | 60.0% | |
| GCTACTGCAGCGGCAGTTTG+TGG | + | 37908:24390-24409 | None:intergenic | 60.0% | |
| GCTCGAACCAGTCTACCCAC+CGG | - | 37908:23443-23462 | MS.gene070606:intron | 60.0% | |
| GGGCCTCCTACTTCGAAACC+CGG | + | 37908:24267-24286 | None:intergenic | 60.0% | |
| TAACGACCTGCCTCACGTGC+AGG | + | 37908:24949-24968 | None:intergenic | 60.0% | |
| TCCTGACCCAGTACCAGTGG+TGG | - | 37908:24353-24372 | MS.gene070606:intron | 60.0% | |
| TCGAAACCCGGTGGAACTGC+TGG | + | 37908:24255-24274 | None:intergenic | 60.0% | |
| TGCCTCACGTGCAGGACAGT+TGG | + | 37908:24941-24960 | None:intergenic | 60.0% | |
| TTCTCGCCGAGCCAACTGCA+TGG | - | 37908:23405-23424 | MS.gene070606:intron | 60.0% | |
| ! | ATGCGGGAGCTCTAGTGCAC+CGG | + | 37908:22353-22372 | None:intergenic | 60.0% |
| ! | CGGTGACTCGGCCGAGTTAT+GGG | + | 37908:23364-23383 | None:intergenic | 60.0% |
| ! | TCCACCACTGGTACTGGGTC+AGG | + | 37908:24357-24376 | None:intergenic | 60.0% |
| ! | TCGGTGACTCGGCCGAGTTA+TGG | + | 37908:23365-23384 | None:intergenic | 60.0% |
| !! | ACTCGGCTCGGTCATCGACT+CGG | - | 37908:22612-22631 | MS.gene070606:CDS | 60.0% |
| ! | GAAACTCGGCTCGAACCGGC+CGG | + | 37908:23490-23509 | None:intergenic | 65.0% |
| ! | TGCGGGAGCTCTAGTGCACC+GGG | + | 37908:22352-22371 | None:intergenic | 65.0% |
| !! | CCAGTCTACCCACCGGTTCC+CGG | - | 37908:23450-23469 | MS.gene070606:intron | 65.0% |
| !! | CTCGGTCATCGACTCGGCAG+AGG | - | 37908:22618-22637 | MS.gene070606:CDS | 65.0% |
| !! | GCAGTTGGCTCGGCGAGAAC+CGG | + | 37908:23404-23423 | None:intergenic | 65.0% |
| CCGGGAACCGGTGGGTAGAC+TGG | + | 37908:23453-23472 | None:intergenic | 70.0% | |
| CCGGTTGGACCGGTCGAACC+GGG | + | 37908:23471-23490 | None:intergenic | 70.0% | |
| CGGTCGAACCGGGAACCGGT+GGG | + | 37908:23461-23480 | None:intergenic | 70.0% | |
| CTCGAACCGGCCGGTTGGAC+CGG | + | 37908:23481-23500 | None:intergenic | 70.0% | |
| GCCGGTTGGACCGGTCGAAC+CGG | + | 37908:23472-23491 | None:intergenic | 70.0% | |
| GGACCGGTCGAACCGGGAAC+CGG | + | 37908:23465-23484 | None:intergenic | 70.0% | |
| GTTCGACCGGTCCAACCGGC+CGG | - | 37908:23472-23491 | MS.gene070606:intron | 70.0% | |
| ! | CCCGGTTCGACCGGTCCAAC+CGG | - | 37908:23468-23487 | MS.gene070606:intron | 70.0% |
| !! | CCACCGGTTCCCGGTTCGAC+CGG | - | 37908:23459-23478 | MS.gene070606:intron | 70.0% |
| !! | GTTCTAAGGCCCGGCGAGCC+CGG | + | 37908:23573-23592 | None:intergenic | 70.0% |
| !! | TTCTAAGGCCCGGCGAGCCC+GGG | + | 37908:23572-23591 | None:intergenic | 70.0% |
| CCGGTCGAACCGGGAACCGG+TGG | + | 37908:23462-23481 | None:intergenic | 75.0% | |
| ! | CTCGGCTCGAACCGGCCGGT+TGG | + | 37908:23486-23505 | None:intergenic | 75.0% |
| ! | CCGGAGCCCGGGCGAGTGCC+CGG | - | 37908:23551-23570 | MS.gene070606:intron | 85.0% |
| ! | CCGGGCACTCGCCCGGGCTC+CGG | + | 37908:23554-23573 | None:intergenic | 85.0% |
| ! | CGGAGCCCGGGCGAGTGCCC+GGG | - | 37908:23552-23571 | MS.gene070606:intron | 85.0% |
| ! | GCGAGCCCGGGCACTCGCCC+GGG | + | 37908:23560-23579 | None:intergenic | 85.0% |
| ! | GGCGAGCCCGGGCACTCGCC+CGG | + | 37908:23561-23580 | None:intergenic | 85.0% |
| ! | GGCGAGTGCCCGGGCTCGCC+GGG | - | 37908:23561-23580 | MS.gene070606:intron | 85.0% |
| ! | GGGCGAGTGCCCGGGCTCGC+CGG | - | 37908:23560-23579 | MS.gene070606:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 37908 | gene | 21937 | 24976 | 21937 | ID=MS.gene070606 |
| 37908 | mRNA | 21937 | 24976 | 21937 | ID=MS.gene070606.t1;Parent=MS.gene070606 |
| 37908 | exon | 24929 | 24976 | 24929 | ID=MS.gene070606.t1.exon1;Parent=MS.gene070606.t1 |
| 37908 | CDS | 24929 | 24976 | 24929 | ID=cds.MS.gene070606.t1;Parent=MS.gene070606.t1 |
| 37908 | exon | 22823 | 23138 | 22823 | ID=MS.gene070606.t1.exon2;Parent=MS.gene070606.t1 |
| 37908 | CDS | 22823 | 23138 | 22823 | ID=cds.MS.gene070606.t1;Parent=MS.gene070606.t1 |
| 37908 | exon | 22317 | 22657 | 22317 | ID=MS.gene070606.t1.exon3;Parent=MS.gene070606.t1 |
| 37908 | CDS | 22317 | 22657 | 22317 | ID=cds.MS.gene070606.t1;Parent=MS.gene070606.t1 |
| 37908 | exon | 21937 | 22197 | 21937 | ID=MS.gene070606.t1.exon4;Parent=MS.gene070606.t1 |
| 37908 | CDS | 21937 | 22197 | 21937 | ID=cds.MS.gene070606.t1;Parent=MS.gene070606.t1 |
| Gene Sequence |
| Protein sequence |
