Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070625.t1 | XP_003621267.1 | 66.2 | 349 | 77 | 2 | 1 | 308 | 1 | 349 | 3.60E-114 | 421.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070625.t1 | Q9FLJ2 | 51.6 | 215 | 81 | 2 | 13 | 204 | 10 | 224 | 6.0e-49 | 196.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070625.t1 | G7L222 | 66.2 | 349 | 77 | 2 | 1 | 308 | 1 | 349 | 2.6e-114 | 421.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene070625.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070625.t1 | MTR_7g011130 | 76.791 | 349 | 40 | 2 | 1 | 308 | 1 | 349 | 0.0 | 521 |
MS.gene070625.t1 | MTR_7g011120 | 74.540 | 326 | 35 | 4 | 12 | 308 | 1 | 307 | 6.28e-167 | 466 |
MS.gene070625.t1 | MTR_3g070030 | 64.167 | 360 | 66 | 5 | 1 | 308 | 1 | 349 | 2.45e-154 | 436 |
MS.gene070625.t1 | MTR_3g070040 | 61.272 | 346 | 71 | 6 | 12 | 308 | 1 | 332 | 5.78e-137 | 391 |
MS.gene070625.t1 | MTR_6g012670 | 48.495 | 299 | 111 | 7 | 15 | 287 | 16 | 297 | 2.30e-80 | 246 |
MS.gene070625.t1 | MTR_4g108760 | 49.027 | 257 | 102 | 6 | 5 | 237 | 2 | 253 | 7.86e-68 | 216 |
MS.gene070625.t1 | MTR_3g435150 | 51.598 | 219 | 83 | 2 | 5 | 202 | 2 | 218 | 1.68e-65 | 208 |
MS.gene070625.t1 | MTR_6g084430 | 48.908 | 229 | 95 | 3 | 19 | 230 | 5 | 228 | 1.12e-60 | 196 |
MS.gene070625.t1 | MTR_6g032770 | 55.307 | 179 | 55 | 3 | 15 | 168 | 14 | 192 | 5.50e-60 | 196 |
MS.gene070625.t1 | MTR_2g078700 | 61.146 | 157 | 38 | 2 | 19 | 152 | 23 | 179 | 5.98e-60 | 196 |
MS.gene070625.t1 | MTR_7g085260 | 53.476 | 187 | 61 | 4 | 5 | 165 | 3 | 189 | 3.84e-57 | 189 |
MS.gene070625.t1 | MTR_3g109340 | 55.484 | 155 | 50 | 2 | 19 | 154 | 22 | 176 | 1.40e-53 | 179 |
MS.gene070625.t1 | MTR_3g109340 | 55.128 | 156 | 50 | 2 | 19 | 154 | 22 | 177 | 2.06e-53 | 178 |
MS.gene070625.t1 | MTR_1g008740 | 55.414 | 157 | 49 | 3 | 19 | 154 | 13 | 169 | 3.72e-53 | 177 |
MS.gene070625.t1 | MTR_1g008740 | 55.414 | 157 | 49 | 3 | 19 | 154 | 27 | 183 | 6.19e-53 | 177 |
MS.gene070625.t1 | MTR_3g116070 | 48.259 | 201 | 86 | 5 | 19 | 202 | 23 | 222 | 5.75e-51 | 172 |
MS.gene070625.t1 | MTR_1g069805 | 38.767 | 227 | 118 | 4 | 19 | 227 | 10 | 233 | 3.04e-46 | 157 |
MS.gene070625.t1 | MTR_4g036030 | 50.000 | 150 | 55 | 2 | 20 | 149 | 8 | 157 | 4.28e-45 | 156 |
MS.gene070625.t1 | MTR_4g101680 | 50.667 | 150 | 54 | 2 | 20 | 149 | 8 | 157 | 7.48e-45 | 156 |
MS.gene070625.t1 | MTR_5g012080 | 49.342 | 152 | 55 | 3 | 20 | 149 | 8 | 159 | 1.55e-43 | 152 |
MS.gene070625.t1 | MTR_2g064470 | 46.835 | 158 | 60 | 3 | 12 | 148 | 4 | 158 | 1.67e-43 | 151 |
MS.gene070625.t1 | MTR_4g035590 | 51.333 | 150 | 54 | 2 | 20 | 150 | 9 | 158 | 1.77e-43 | 152 |
MS.gene070625.t1 | MTR_2g062730 | 48.077 | 156 | 60 | 3 | 16 | 150 | 7 | 162 | 6.41e-43 | 150 |
MS.gene070625.t1 | MTR_5g021710 | 48.667 | 150 | 57 | 2 | 20 | 149 | 9 | 158 | 2.93e-42 | 149 |
MS.gene070625.t1 | MTR_8g024480 | 44.118 | 170 | 64 | 2 | 18 | 156 | 14 | 183 | 3.50e-41 | 148 |
MS.gene070625.t1 | MTR_8g076110 | 46.667 | 150 | 60 | 2 | 20 | 149 | 7 | 156 | 4.03e-41 | 145 |
MS.gene070625.t1 | MTR_8g059170 | 42.593 | 162 | 72 | 1 | 14 | 154 | 9 | 170 | 7.87e-41 | 145 |
MS.gene070625.t1 | MTR_3g093040 | 52.033 | 123 | 57 | 1 | 17 | 137 | 106 | 228 | 1.08e-40 | 144 |
MS.gene070625.t1 | MTR_7g097090 | 45.205 | 146 | 63 | 2 | 19 | 147 | 10 | 155 | 1.16e-40 | 143 |
MS.gene070625.t1 | MTR_2g079990 | 41.718 | 163 | 76 | 1 | 11 | 154 | 8 | 170 | 2.10e-40 | 144 |
MS.gene070625.t1 | MTR_3g093050 | 47.945 | 146 | 68 | 2 | 19 | 162 | 22 | 161 | 2.68e-40 | 148 |
MS.gene070625.t1 | MTR_3g093050 | 47.945 | 146 | 68 | 2 | 19 | 162 | 22 | 161 | 3.34e-40 | 148 |
MS.gene070625.t1 | MTR_3g096920 | 41.818 | 165 | 73 | 2 | 16 | 158 | 4 | 167 | 6.24e-40 | 141 |
MS.gene070625.t1 | MTR_8g094580 | 42.169 | 166 | 72 | 2 | 17 | 159 | 5 | 169 | 6.44e-40 | 141 |
MS.gene070625.t1 | MTR_5g069030 | 46.939 | 147 | 70 | 2 | 18 | 162 | 24 | 164 | 7.43e-40 | 147 |
MS.gene070625.t1 | MTR_2g064090 | 51.220 | 123 | 58 | 1 | 17 | 137 | 4 | 126 | 1.56e-39 | 142 |
MS.gene070625.t1 | MTR_4g081870 | 40.994 | 161 | 72 | 1 | 18 | 155 | 8 | 168 | 1.77e-39 | 140 |
MS.gene070625.t1 | MTR_2g064730 | 86.842 | 76 | 9 | 1 | 186 | 260 | 6 | 81 | 1.96e-39 | 134 |
MS.gene070625.t1 | MTR_1g096430 | 45.223 | 157 | 65 | 4 | 12 | 148 | 1 | 156 | 2.88e-39 | 141 |
MS.gene070625.t1 | MTR_2g079990 | 50.000 | 124 | 62 | 0 | 14 | 137 | 11 | 134 | 4.34e-39 | 141 |
MS.gene070625.t1 | MTR_3g088110 | 42.308 | 156 | 67 | 2 | 16 | 149 | 4 | 158 | 7.41e-39 | 139 |
MS.gene070625.t1 | MTR_6g477900 | 51.220 | 123 | 58 | 1 | 17 | 137 | 4 | 126 | 7.59e-39 | 137 |
MS.gene070625.t1 | MTR_7g005280 | 44.937 | 158 | 65 | 4 | 16 | 154 | 12 | 166 | 1.13e-38 | 137 |
MS.gene070625.t1 | MTR_3g096920 | 48.252 | 143 | 69 | 3 | 16 | 156 | 4 | 143 | 1.44e-38 | 139 |
MS.gene070625.t1 | MTR_5g076850 | 51.220 | 123 | 58 | 1 | 17 | 137 | 4 | 126 | 5.03e-38 | 142 |
MS.gene070625.t1 | MTR_3g064580 | 50.407 | 123 | 59 | 1 | 17 | 137 | 4 | 126 | 7.93e-38 | 142 |
MS.gene070625.t1 | MTR_5g041940 | 40.123 | 162 | 74 | 1 | 17 | 155 | 1 | 162 | 1.08e-37 | 135 |
MS.gene070625.t1 | MTR_4g098630 | 37.198 | 207 | 105 | 5 | 14 | 195 | 1 | 207 | 2.11e-37 | 135 |
MS.gene070625.t1 | MTR_4g089135 | 46.667 | 135 | 70 | 1 | 19 | 151 | 15 | 149 | 1.56e-36 | 134 |
MS.gene070625.t1 | MTR_0036s0150 | 45.342 | 161 | 66 | 4 | 22 | 161 | 8 | 167 | 1.76e-36 | 137 |
MS.gene070625.t1 | MTR_2g080010 | 48.000 | 125 | 63 | 1 | 15 | 137 | 11 | 135 | 4.88e-36 | 133 |
MS.gene070625.t1 | MTR_1g090723 | 44.720 | 161 | 67 | 4 | 22 | 161 | 11 | 170 | 5.99e-36 | 136 |
MS.gene070625.t1 | MTR_1g090723 | 44.720 | 161 | 67 | 4 | 22 | 161 | 11 | 170 | 6.24e-36 | 136 |
MS.gene070625.t1 | MTR_5g014300 | 48.438 | 128 | 57 | 2 | 19 | 137 | 6 | 133 | 6.37e-36 | 132 |
MS.gene070625.t1 | MTR_1g090723 | 44.444 | 162 | 67 | 4 | 22 | 161 | 11 | 171 | 9.56e-36 | 136 |
MS.gene070625.t1 | MTR_2157s0010 | 40.854 | 164 | 66 | 2 | 19 | 151 | 8 | 171 | 2.33e-35 | 129 |
MS.gene070625.t1 | MTR_7g085220 | 40.237 | 169 | 69 | 3 | 12 | 148 | 1 | 169 | 2.94e-35 | 130 |
MS.gene070625.t1 | MTR_7g100990 | 42.405 | 158 | 66 | 2 | 16 | 148 | 8 | 165 | 4.01e-35 | 130 |
MS.gene070625.t1 | MTR_8g467490 | 47.244 | 127 | 64 | 2 | 13 | 137 | 9 | 134 | 4.04e-35 | 131 |
MS.gene070625.t1 | MTR_8g063550 | 37.640 | 178 | 87 | 4 | 12 | 168 | 1 | 175 | 7.36e-35 | 129 |
MS.gene070625.t1 | MTR_2g086880 | 47.500 | 120 | 61 | 2 | 19 | 137 | 19 | 137 | 1.45e-34 | 132 |
MS.gene070625.t1 | MTR_2g086880 | 46.094 | 128 | 65 | 3 | 19 | 143 | 19 | 145 | 1.66e-34 | 131 |
MS.gene070625.t1 | MTR_8g063550 | 37.640 | 178 | 87 | 4 | 12 | 168 | 1 | 175 | 1.98e-34 | 130 |
MS.gene070625.t1 | MTR_8g063550 | 37.640 | 178 | 87 | 4 | 12 | 168 | 1 | 175 | 2.06e-34 | 130 |
MS.gene070625.t1 | MTR_5g040420 | 33.333 | 225 | 118 | 4 | 13 | 206 | 9 | 232 | 3.29e-34 | 129 |
MS.gene070625.t1 | MTR_6g011860 | 31.679 | 262 | 138 | 5 | 11 | 231 | 6 | 267 | 4.39e-34 | 128 |
MS.gene070625.t1 | MTR_2g093810 | 48.760 | 121 | 60 | 1 | 19 | 137 | 14 | 134 | 1.17e-33 | 125 |
MS.gene070625.t1 | MTR_3g096140 | 37.931 | 174 | 85 | 4 | 16 | 168 | 5 | 176 | 2.37e-33 | 124 |
MS.gene070625.t1 | MTR_1g097300 | 40.994 | 161 | 73 | 3 | 22 | 161 | 22 | 181 | 7.36e-33 | 127 |
MS.gene070625.t1 | MTR_3g096140 | 37.931 | 174 | 85 | 4 | 16 | 168 | 5 | 176 | 1.06e-32 | 124 |
MS.gene070625.t1 | MTR_8g093580 | 36.517 | 178 | 89 | 4 | 12 | 168 | 1 | 175 | 1.10e-32 | 126 |
MS.gene070625.t1 | MTR_1g090720 | 49.580 | 119 | 58 | 1 | 21 | 137 | 44 | 162 | 8.64e-32 | 124 |
MS.gene070625.t1 | MTR_8g023840 | 52.033 | 123 | 53 | 5 | 20 | 137 | 12 | 133 | 5.45e-31 | 120 |
MS.gene070625.t1 | MTR_4g134460 | 45.763 | 118 | 63 | 1 | 21 | 137 | 56 | 173 | 1.49e-30 | 119 |
MS.gene070625.t1 | MTR_8g023860 | 49.593 | 123 | 56 | 5 | 20 | 137 | 13 | 134 | 1.25e-29 | 117 |
MS.gene070625.t1 | MTR_2g068920 | 42.069 | 145 | 75 | 4 | 1 | 137 | 1 | 144 | 3.75e-29 | 113 |
MS.gene070625.t1 | MTR_2g068880 | 30.094 | 319 | 168 | 9 | 1 | 280 | 1 | 303 | 5.03e-29 | 113 |
MS.gene070625.t1 | MTR_5g090970 | 35.593 | 177 | 106 | 3 | 15 | 188 | 15 | 186 | 1.60e-28 | 112 |
MS.gene070625.t1 | MTR_4g075980 | 40.714 | 140 | 76 | 3 | 1 | 137 | 1 | 136 | 4.19e-27 | 107 |
MS.gene070625.t1 | MTR_3g096140 | 37.013 | 154 | 75 | 3 | 36 | 168 | 3 | 155 | 9.20e-27 | 107 |
MS.gene070625.t1 | MTR_5g090970 | 35.593 | 177 | 105 | 4 | 15 | 188 | 15 | 185 | 9.64e-27 | 107 |
MS.gene070625.t1 | MTR_4g052620 | 42.063 | 126 | 65 | 4 | 19 | 137 | 5 | 129 | 6.50e-26 | 103 |
MS.gene070625.t1 | MTR_8g099750 | 37.838 | 148 | 85 | 4 | 18 | 161 | 13 | 157 | 1.23e-25 | 102 |
MS.gene070625.t1 | MTR_2g086690 | 40.000 | 125 | 68 | 3 | 20 | 137 | 5 | 129 | 1.96e-25 | 102 |
MS.gene070625.t1 | MTR_8g023900 | 41.935 | 124 | 66 | 4 | 19 | 137 | 12 | 134 | 9.14e-24 | 101 |
MS.gene070625.t1 | MTR_8g023900 | 31.646 | 237 | 118 | 11 | 21 | 224 | 195 | 420 | 1.95e-22 | 97.4 |
MS.gene070625.t1 | MTR_8g023930 | 42.742 | 124 | 65 | 5 | 19 | 137 | 24 | 146 | 2.08e-22 | 97.4 |
MS.gene070625.t1 | MTR_7g105170 | 39.683 | 126 | 69 | 4 | 19 | 137 | 4 | 129 | 4.26e-22 | 93.6 |
MS.gene070625.t1 | MTR_8g094580 | 42.241 | 116 | 43 | 2 | 67 | 159 | 1 | 115 | 5.09e-22 | 92.8 |
MS.gene070625.t1 | MTR_3g098810 | 37.903 | 124 | 71 | 2 | 18 | 137 | 13 | 134 | 1.19e-21 | 90.1 |
MS.gene070625.t1 | MTR_3g098810 | 32.298 | 161 | 78 | 3 | 18 | 149 | 13 | 171 | 1.54e-21 | 91.7 |
MS.gene070625.t1 | MTR_8g023880 | 42.029 | 138 | 58 | 7 | 19 | 137 | 7 | 141 | 7.04e-21 | 90.5 |
MS.gene070625.t1 | MTR_4g094302 | 28.402 | 169 | 86 | 3 | 19 | 160 | 11 | 171 | 4.70e-19 | 83.6 |
MS.gene070625.t1 | MTR_4g094302 | 33.884 | 121 | 70 | 2 | 19 | 137 | 11 | 123 | 1.47e-18 | 81.3 |
MS.gene070625.t1 | MTR_7g070140 | 51.471 | 68 | 31 | 1 | 72 | 137 | 17 | 84 | 6.53e-17 | 76.3 |
MS.gene070625.t1 | MTR_7g083360 | 32.847 | 137 | 84 | 6 | 16 | 147 | 7 | 140 | 3.12e-16 | 75.1 |
MS.gene070625.t1 | MTR_8g093790 | 34.868 | 152 | 71 | 5 | 17 | 156 | 8 | 143 | 4.69e-16 | 75.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070625.t1 | AT5G61430 | 41.441 | 333 | 131 | 10 | 13 | 289 | 10 | 334 | 4.43e-66 | 211 |
MS.gene070625.t1 | AT5G07680 | 46.063 | 254 | 101 | 5 | 10 | 230 | 8 | 258 | 3.65e-65 | 208 |
MS.gene070625.t1 | AT5G07680 | 46.939 | 245 | 94 | 5 | 19 | 230 | 3 | 244 | 1.26e-64 | 206 |
MS.gene070625.t1 | AT5G39610 | 58.084 | 167 | 49 | 1 | 15 | 160 | 16 | 182 | 1.72e-61 | 197 |
MS.gene070625.t1 | AT3G29035 | 56.069 | 173 | 55 | 1 | 3 | 154 | 8 | 180 | 3.24e-61 | 197 |
MS.gene070625.t1 | AT3G18400 | 58.442 | 154 | 46 | 1 | 19 | 154 | 5 | 158 | 7.96e-59 | 191 |
MS.gene070625.t1 | AT5G18270 | 58.228 | 158 | 44 | 2 | 15 | 150 | 17 | 174 | 1.76e-58 | 191 |
MS.gene070625.t1 | AT5G18270 | 58.228 | 158 | 44 | 2 | 15 | 150 | 17 | 174 | 2.73e-58 | 190 |
MS.gene070625.t1 | AT3G04060 | 39.726 | 292 | 120 | 7 | 7 | 274 | 8 | 267 | 1.76e-56 | 186 |
MS.gene070625.t1 | AT5G53950 | 58.170 | 153 | 41 | 2 | 19 | 148 | 17 | 169 | 3.10e-56 | 186 |
MS.gene070625.t1 | AT2G24430 | 52.941 | 170 | 60 | 2 | 5 | 154 | 2 | 171 | 2.74e-54 | 179 |
MS.gene070625.t1 | AT2G24430 | 52.941 | 170 | 60 | 2 | 5 | 154 | 2 | 171 | 2.74e-54 | 179 |
MS.gene070625.t1 | AT1G76420 | 54.667 | 150 | 48 | 2 | 19 | 148 | 22 | 171 | 1.59e-53 | 178 |
MS.gene070625.t1 | AT3G15170 | 67.500 | 120 | 37 | 1 | 20 | 137 | 21 | 140 | 1.27e-51 | 172 |
MS.gene070625.t1 | AT3G12977 | 32.773 | 238 | 125 | 4 | 12 | 227 | 11 | 235 | 1.14e-45 | 156 |
MS.gene070625.t1 | AT1G12260 | 51.333 | 150 | 53 | 2 | 20 | 149 | 8 | 157 | 3.24e-45 | 157 |
MS.gene070625.t1 | AT1G12260 | 51.333 | 150 | 53 | 2 | 20 | 149 | 8 | 157 | 4.80e-45 | 157 |
MS.gene070625.t1 | AT5G66300 | 49.673 | 153 | 56 | 2 | 19 | 150 | 12 | 164 | 2.46e-44 | 153 |
MS.gene070625.t1 | AT1G62700 | 51.316 | 152 | 54 | 3 | 18 | 149 | 6 | 157 | 3.33e-44 | 155 |
MS.gene070625.t1 | AT1G62700 | 51.316 | 152 | 54 | 3 | 18 | 149 | 6 | 157 | 3.33e-44 | 155 |
MS.gene070625.t1 | AT1G56010 | 40.000 | 175 | 82 | 2 | 1 | 152 | 1 | 175 | 5.53e-44 | 153 |
MS.gene070625.t1 | AT2G18060 | 46.012 | 163 | 68 | 2 | 14 | 156 | 4 | 166 | 2.72e-43 | 152 |
MS.gene070625.t1 | AT2G18060 | 46.012 | 163 | 68 | 2 | 14 | 156 | 4 | 166 | 2.72e-43 | 152 |
MS.gene070625.t1 | AT5G62380 | 45.349 | 172 | 68 | 3 | 17 | 162 | 5 | 176 | 8.17e-43 | 150 |
MS.gene070625.t1 | AT5G62380 | 45.349 | 172 | 68 | 3 | 17 | 162 | 5 | 176 | 8.17e-43 | 150 |
MS.gene070625.t1 | AT4G10350 | 49.686 | 159 | 58 | 3 | 20 | 156 | 10 | 168 | 8.89e-43 | 150 |
MS.gene070625.t1 | AT1G33280 | 45.930 | 172 | 74 | 2 | 20 | 172 | 9 | 180 | 1.66e-42 | 149 |
MS.gene070625.t1 | AT2G46770 | 42.781 | 187 | 71 | 3 | 18 | 169 | 15 | 200 | 1.85e-42 | 150 |
MS.gene070625.t1 | AT1G71930 | 39.474 | 228 | 111 | 5 | 14 | 215 | 4 | 230 | 4.92e-42 | 148 |
MS.gene070625.t1 | AT1G71930 | 39.474 | 228 | 111 | 5 | 14 | 215 | 4 | 230 | 4.92e-42 | 148 |
MS.gene070625.t1 | AT1G33060 | 48.630 | 146 | 67 | 2 | 19 | 162 | 24 | 163 | 1.58e-41 | 152 |
MS.gene070625.t1 | AT1G33060 | 48.630 | 146 | 67 | 2 | 19 | 162 | 24 | 163 | 1.78e-41 | 152 |
MS.gene070625.t1 | AT4G35580 | 48.299 | 147 | 68 | 2 | 19 | 163 | 9 | 149 | 2.02e-41 | 150 |
MS.gene070625.t1 | AT4G35580 | 48.299 | 147 | 68 | 2 | 19 | 163 | 9 | 149 | 2.60e-41 | 150 |
MS.gene070625.t1 | AT4G35580 | 48.299 | 147 | 68 | 2 | 19 | 163 | 9 | 149 | 2.62e-41 | 150 |
MS.gene070625.t1 | AT4G36160 | 47.333 | 150 | 59 | 2 | 20 | 149 | 11 | 160 | 5.36e-41 | 146 |
MS.gene070625.t1 | AT4G36160 | 47.333 | 150 | 59 | 2 | 20 | 149 | 11 | 160 | 5.36e-41 | 146 |
MS.gene070625.t1 | AT4G36160 | 47.333 | 150 | 59 | 2 | 20 | 149 | 15 | 164 | 6.73e-41 | 146 |
MS.gene070625.t1 | AT5G61430 | 59.167 | 120 | 28 | 1 | 67 | 165 | 1 | 120 | 6.95e-41 | 143 |
MS.gene070625.t1 | AT1G79580 | 48.077 | 156 | 61 | 4 | 16 | 151 | 14 | 169 | 1.43e-40 | 145 |
MS.gene070625.t1 | AT1G79580 | 48.077 | 156 | 61 | 4 | 16 | 151 | 14 | 169 | 1.43e-40 | 145 |
MS.gene070625.t1 | AT1G79580 | 48.077 | 156 | 61 | 4 | 16 | 151 | 14 | 169 | 1.43e-40 | 145 |
MS.gene070625.t1 | AT1G79580 | 48.077 | 156 | 61 | 4 | 16 | 151 | 14 | 169 | 1.43e-40 | 145 |
MS.gene070625.t1 | AT1G79580 | 48.077 | 156 | 61 | 4 | 16 | 151 | 14 | 169 | 1.43e-40 | 145 |
MS.gene070625.t1 | AT4G27410 | 45.455 | 143 | 78 | 0 | 10 | 152 | 5 | 147 | 1.45e-40 | 143 |
MS.gene070625.t1 | AT3G61910 | 42.775 | 173 | 64 | 2 | 18 | 155 | 10 | 182 | 2.91e-40 | 143 |
MS.gene070625.t1 | AT3G15500 | 41.250 | 160 | 75 | 1 | 14 | 154 | 9 | 168 | 2.99e-40 | 143 |
MS.gene070625.t1 | AT1G52890 | 41.875 | 160 | 74 | 1 | 14 | 154 | 9 | 168 | 8.06e-40 | 142 |
MS.gene070625.t1 | AT1G32770 | 40.284 | 211 | 88 | 5 | 18 | 196 | 15 | 219 | 2.10e-39 | 142 |
MS.gene070625.t1 | AT5G08790 | 42.945 | 163 | 68 | 2 | 16 | 154 | 4 | 165 | 2.74e-39 | 139 |
MS.gene070625.t1 | AT1G77450 | 42.308 | 156 | 67 | 2 | 17 | 150 | 8 | 162 | 3.84e-39 | 138 |
MS.gene070625.t1 | AT5G46590 | 32.993 | 294 | 156 | 8 | 19 | 305 | 6 | 265 | 4.39e-39 | 139 |
MS.gene070625.t1 | AT2G27300 | 34.783 | 230 | 118 | 5 | 19 | 223 | 15 | 237 | 4.94e-39 | 140 |
MS.gene070625.t1 | AT3G17730 | 50.407 | 123 | 59 | 1 | 17 | 137 | 4 | 126 | 1.52e-38 | 137 |
MS.gene070625.t1 | AT1G01720 | 41.509 | 159 | 69 | 2 | 15 | 150 | 3 | 160 | 3.21e-38 | 137 |
MS.gene070625.t1 | AT5G63790 | 52.756 | 127 | 58 | 2 | 11 | 137 | 43 | 167 | 3.33e-38 | 137 |
MS.gene070625.t1 | AT5G63790 | 42.857 | 168 | 70 | 3 | 11 | 154 | 53 | 218 | 4.25e-38 | 137 |
MS.gene070625.t1 | AT5G04410 | 44.720 | 161 | 67 | 3 | 22 | 161 | 12 | 171 | 4.59e-38 | 142 |
MS.gene070625.t1 | AT3G10500 | 43.478 | 161 | 69 | 3 | 22 | 161 | 12 | 171 | 6.80e-38 | 141 |
MS.gene070625.t1 | AT1G65910 | 49.593 | 123 | 60 | 1 | 17 | 137 | 4 | 126 | 8.34e-38 | 142 |
MS.gene070625.t1 | AT3G03200 | 51.220 | 123 | 58 | 1 | 17 | 137 | 4 | 126 | 1.42e-37 | 139 |
MS.gene070625.t1 | AT1G54330 | 51.587 | 126 | 59 | 1 | 14 | 137 | 1 | 126 | 1.59e-37 | 135 |
MS.gene070625.t1 | AT4G28530 | 41.463 | 164 | 63 | 3 | 18 | 148 | 9 | 172 | 3.33e-37 | 136 |
MS.gene070625.t1 | AT1G26870 | 48.921 | 139 | 66 | 3 | 1 | 137 | 1 | 136 | 3.35e-37 | 137 |
MS.gene070625.t1 | AT1G69490 | 41.615 | 161 | 71 | 1 | 19 | 156 | 9 | 169 | 3.72e-37 | 134 |
MS.gene070625.t1 | AT3G49530 | 45.270 | 148 | 72 | 3 | 19 | 163 | 13 | 154 | 4.26e-37 | 137 |
MS.gene070625.t1 | AT1G61110 | 47.761 | 134 | 69 | 1 | 5 | 137 | 2 | 135 | 5.07e-37 | 135 |
MS.gene070625.t1 | AT2G33480 | 44.667 | 150 | 63 | 2 | 17 | 149 | 13 | 159 | 5.88e-37 | 133 |
MS.gene070625.t1 | AT5G24590 | 32.226 | 301 | 165 | 7 | 19 | 294 | 13 | 299 | 7.79e-37 | 137 |
MS.gene070625.t1 | AT5G46590 | 51.639 | 122 | 56 | 2 | 19 | 137 | 6 | 127 | 7.93e-37 | 133 |
MS.gene070625.t1 | AT5G17260 | 49.593 | 123 | 60 | 1 | 17 | 137 | 4 | 126 | 1.02e-36 | 137 |
MS.gene070625.t1 | AT5G13180 | 41.772 | 158 | 69 | 3 | 17 | 154 | 12 | 166 | 1.08e-36 | 132 |
MS.gene070625.t1 | AT2G33480 | 44.079 | 152 | 63 | 2 | 17 | 149 | 13 | 161 | 1.08e-36 | 132 |
MS.gene070625.t1 | AT3G49530 | 42.945 | 163 | 80 | 4 | 4 | 163 | 2 | 154 | 1.33e-36 | 136 |
MS.gene070625.t1 | AT3G10480 | 46.711 | 152 | 60 | 2 | 22 | 152 | 30 | 181 | 2.33e-36 | 135 |
MS.gene070625.t1 | AT3G10490 | 45.098 | 153 | 62 | 2 | 22 | 152 | 30 | 182 | 2.77e-36 | 130 |
MS.gene070625.t1 | AT3G10480 | 46.405 | 153 | 60 | 2 | 22 | 152 | 30 | 182 | 3.18e-36 | 135 |
MS.gene070625.t1 | AT4G27410 | 40.625 | 160 | 78 | 1 | 10 | 152 | 5 | 164 | 3.40e-36 | 132 |
MS.gene070625.t1 | AT3G04070 | 50.806 | 124 | 56 | 1 | 19 | 137 | 10 | 133 | 1.73e-35 | 131 |
MS.gene070625.t1 | AT3G04070 | 50.806 | 124 | 56 | 1 | 19 | 137 | 10 | 133 | 2.27e-35 | 131 |
MS.gene070625.t1 | AT3G10490 | 45.098 | 153 | 62 | 2 | 22 | 152 | 30 | 182 | 7.44e-35 | 131 |
MS.gene070625.t1 | AT4G17980 | 49.593 | 123 | 58 | 2 | 19 | 137 | 6 | 128 | 1.15e-34 | 127 |
MS.gene070625.t1 | AT4G17980 | 49.593 | 123 | 58 | 2 | 19 | 137 | 6 | 128 | 2.69e-34 | 127 |
MS.gene070625.t1 | AT5G39820 | 49.153 | 118 | 58 | 1 | 22 | 137 | 23 | 140 | 6.60e-34 | 127 |
MS.gene070625.t1 | AT3G15510 | 37.870 | 169 | 73 | 2 | 23 | 159 | 21 | 189 | 6.87e-34 | 127 |
MS.gene070625.t1 | AT2G43000 | 28.866 | 291 | 180 | 5 | 1 | 283 | 1 | 272 | 2.55e-33 | 124 |
MS.gene070625.t1 | AT5G22290 | 44.275 | 131 | 70 | 3 | 8 | 137 | 12 | 140 | 3.72e-33 | 125 |
MS.gene070625.t1 | AT3G44290 | 45.833 | 120 | 63 | 2 | 19 | 137 | 15 | 133 | 8.90e-33 | 121 |
MS.gene070625.t1 | AT1G32510 | 44.531 | 128 | 62 | 2 | 19 | 137 | 6 | 133 | 6.09e-32 | 120 |
MS.gene070625.t1 | AT3G44290 | 45.833 | 120 | 63 | 2 | 19 | 137 | 15 | 133 | 8.07e-32 | 121 |
MS.gene070625.t1 | AT2G02450 | 47.863 | 117 | 60 | 1 | 22 | 137 | 54 | 170 | 8.50e-32 | 122 |
MS.gene070625.t1 | AT2G02450 | 47.863 | 117 | 60 | 1 | 22 | 137 | 54 | 170 | 8.99e-32 | 122 |
MS.gene070625.t1 | AT3G10480 | 38.710 | 186 | 59 | 2 | 22 | 152 | 30 | 215 | 8.76e-31 | 121 |
MS.gene070625.t1 | AT5G09330 | 35.928 | 167 | 85 | 3 | 16 | 161 | 3 | 168 | 1.05e-30 | 120 |
MS.gene070625.t1 | AT5G09330 | 35.928 | 167 | 85 | 3 | 16 | 161 | 3 | 168 | 1.05e-30 | 120 |
MS.gene070625.t1 | AT5G09330 | 35.928 | 167 | 85 | 3 | 16 | 161 | 3 | 168 | 1.05e-30 | 120 |
MS.gene070625.t1 | AT5G09330 | 35.928 | 167 | 85 | 3 | 16 | 161 | 3 | 168 | 1.05e-30 | 120 |
MS.gene070625.t1 | AT5G09330 | 35.928 | 167 | 85 | 3 | 16 | 161 | 3 | 168 | 1.05e-30 | 120 |
MS.gene070625.t1 | AT5G64060 | 41.129 | 124 | 71 | 1 | 16 | 137 | 3 | 126 | 4.21e-30 | 117 |
MS.gene070625.t1 | AT1G52880 | 38.994 | 159 | 66 | 2 | 23 | 150 | 21 | 179 | 5.62e-29 | 113 |
MS.gene070625.t1 | AT1G34180 | 39.610 | 154 | 79 | 3 | 18 | 168 | 14 | 156 | 1.60e-28 | 114 |
MS.gene070625.t1 | AT1G34180 | 39.610 | 154 | 79 | 3 | 18 | 168 | 14 | 156 | 2.48e-28 | 114 |
MS.gene070625.t1 | AT1G34190 | 45.528 | 123 | 64 | 2 | 18 | 137 | 14 | 136 | 3.86e-28 | 114 |
MS.gene070625.t1 | AT2G17040 | 41.129 | 124 | 69 | 2 | 17 | 137 | 5 | 127 | 1.90e-27 | 108 |
MS.gene070625.t1 | AT4G28530 | 36.735 | 147 | 57 | 2 | 18 | 148 | 9 | 135 | 4.52e-27 | 108 |
MS.gene070625.t1 | AT1G32870 | 41.216 | 148 | 81 | 3 | 12 | 155 | 3 | 148 | 5.52e-27 | 110 |
MS.gene070625.t1 | AT1G32870 | 41.216 | 148 | 81 | 3 | 12 | 155 | 3 | 148 | 6.01e-27 | 110 |
MS.gene070625.t1 | AT1G34180 | 36.747 | 166 | 79 | 3 | 18 | 168 | 14 | 168 | 6.92e-27 | 110 |
MS.gene070625.t1 | AT3G12977 | 33.152 | 184 | 88 | 4 | 66 | 227 | 12 | 182 | 7.70e-27 | 105 |
MS.gene070625.t1 | AT1G32870 | 44.531 | 128 | 67 | 2 | 12 | 137 | 39 | 164 | 9.64e-27 | 110 |
MS.gene070625.t1 | AT1G34180 | 36.747 | 166 | 79 | 3 | 18 | 168 | 14 | 168 | 1.11e-26 | 110 |
MS.gene070625.t1 | AT3G12910 | 44.444 | 126 | 63 | 4 | 17 | 137 | 20 | 143 | 1.72e-26 | 106 |
MS.gene070625.t1 | AT5G04395 | 40.000 | 135 | 65 | 2 | 19 | 137 | 28 | 162 | 1.22e-24 | 98.6 |
MS.gene070625.t1 | AT4G10350 | 48.696 | 115 | 37 | 3 | 64 | 156 | 7 | 121 | 2.35e-24 | 100 |
MS.gene070625.t1 | AT1G56010 | 44.444 | 108 | 38 | 1 | 67 | 152 | 1 | 108 | 4.82e-24 | 99.0 |
MS.gene070625.t1 | AT4G01550 | 40.909 | 132 | 69 | 5 | 17 | 142 | 2 | 130 | 3.09e-22 | 96.7 |
MS.gene070625.t1 | AT5G22380 | 37.097 | 124 | 69 | 4 | 22 | 137 | 8 | 130 | 4.23e-21 | 90.5 |
MS.gene070625.t1 | AT2G33480 | 44.330 | 97 | 35 | 1 | 72 | 149 | 8 | 104 | 3.69e-20 | 87.0 |
MS.gene070625.t1 | AT3G44350 | 34.959 | 123 | 74 | 3 | 21 | 137 | 7 | 129 | 5.41e-20 | 85.5 |
MS.gene070625.t1 | AT3G44350 | 34.959 | 123 | 74 | 3 | 21 | 137 | 7 | 129 | 1.95e-19 | 85.9 |
MS.gene070625.t1 | AT4G01520 | 36.719 | 128 | 74 | 5 | 17 | 137 | 2 | 129 | 1.04e-18 | 85.1 |
MS.gene070625.t1 | AT5G64530 | 34.711 | 121 | 65 | 3 | 19 | 137 | 3 | 111 | 3.93e-18 | 80.5 |
MS.gene070625.t1 | AT1G02230 | 41.071 | 112 | 59 | 5 | 20 | 124 | 4 | 115 | 6.60e-18 | 83.6 |
MS.gene070625.t1 | AT4G01540 | 38.211 | 123 | 69 | 5 | 22 | 137 | 7 | 129 | 7.28e-18 | 83.6 |
MS.gene070625.t1 | AT4G01540 | 38.211 | 123 | 69 | 5 | 22 | 137 | 7 | 129 | 9.56e-18 | 83.6 |
MS.gene070625.t1 | AT3G04420 | 34.426 | 122 | 76 | 2 | 20 | 137 | 4 | 125 | 1.04e-17 | 82.0 |
MS.gene070625.t1 | AT4G01540 | 38.211 | 123 | 69 | 5 | 22 | 137 | 7 | 129 | 1.18e-17 | 83.6 |
MS.gene070625.t1 | AT4G01540 | 38.211 | 123 | 69 | 5 | 22 | 137 | 7 | 129 | 1.38e-17 | 83.2 |
MS.gene070625.t1 | AT3G04420 | 34.426 | 122 | 76 | 2 | 20 | 137 | 4 | 125 | 1.59e-17 | 82.0 |
MS.gene070625.t1 | AT5G64530 | 34.711 | 121 | 65 | 3 | 19 | 137 | 3 | 111 | 2.03e-17 | 79.0 |
MS.gene070625.t1 | AT1G02220 | 33.607 | 122 | 74 | 3 | 20 | 137 | 4 | 122 | 1.09e-15 | 77.4 |
MS.gene070625.t1 | AT5G14000 | 28.962 | 183 | 96 | 5 | 12 | 169 | 1 | 174 | 8.13e-15 | 72.4 |
MS.gene070625.t1 | AT1G02250 | 33.333 | 126 | 74 | 4 | 20 | 138 | 4 | 126 | 1.44e-14 | 73.9 |
MS.gene070625.t1 | AT3G56530 | 31.746 | 126 | 83 | 2 | 15 | 137 | 48 | 173 | 1.48e-14 | 73.6 |
MS.gene070625.t1 | AT5G14000 | 31.405 | 121 | 74 | 2 | 12 | 125 | 1 | 119 | 8.59e-14 | 68.2 |
MS.gene070625.t1 | AT1G01010 | 32.824 | 131 | 70 | 5 | 21 | 137 | 5 | 131 | 9.27e-14 | 71.6 |
MS.gene070625.t1 | AT3G10490 | 45.679 | 81 | 24 | 1 | 92 | 152 | 2 | 82 | 1.41e-13 | 70.9 |
MS.gene070625.t1 | AT3G10490 | 45.679 | 81 | 24 | 1 | 92 | 152 | 2 | 82 | 1.41e-13 | 70.9 |
MS.gene070625.t1 | AT2G18060 | 44.156 | 77 | 26 | 1 | 97 | 156 | 2 | 78 | 4.90e-13 | 68.6 |
MS.gene070625.t1 | AT3G04430 | 38.318 | 107 | 60 | 4 | 23 | 124 | 2 | 107 | 8.23e-13 | 66.6 |
Find 50 sgRNAs with CRISPR-Local
Find 117 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCAATTGTTGCTTCAGTTAA+AGG | 0.182371 | 7.1:+84365210 | None:intergenic |
TACAAGGGAAATTCATTAAC+TGG | 0.237255 | 7.1:-84366212 | MS.gene070625:CDS |
TTATTCAGAGATGGCTAAAA+TGG | 0.296774 | 7.1:-84366351 | MS.gene070625:intron |
GATATCTCATCTGTGGTATA+TGG | 0.312060 | 7.1:-84365096 | MS.gene070625:CDS |
TTTGGTTTCTCTGTTTGATT+TGG | 0.323737 | 7.1:+84365315 | None:intergenic |
TTCATCCTCTTCAAAACAAA+TGG | 0.371961 | 7.1:-84365241 | MS.gene070625:CDS |
CTGTTGGTCCTTTGACCAGT+TGG | 0.374709 | 7.1:+84366284 | None:intergenic |
CTCTCCCAAAAGAAAACTCT+TGG | 0.386693 | 7.1:+84365136 | None:intergenic |
GAGCTACTAATGCTGGCTAT+TGG | 0.389330 | 7.1:-84366262 | MS.gene070625:CDS |
CAATTGTTGCTTCAGTTAAA+GGG | 0.406411 | 7.1:+84365211 | None:intergenic |
GACATGCTTCAAAGGTGGTC+GGG | 0.419512 | 7.1:-84365069 | MS.gene070625:CDS |
TGTTGGTCCTTTGACCAGTT+GGG | 0.420869 | 7.1:+84366285 | None:intergenic |
TTTCTCTGTTTGATTTGGAT+TGG | 0.425619 | 7.1:+84365320 | None:intergenic |
AAAATGAATGGTTCAAAACT+TGG | 0.427761 | 7.1:-84365459 | MS.gene070625:CDS |
AATTCCCGACCATTGAGGTT+TGG | 0.437341 | 7.1:+84365178 | None:intergenic |
CCCGACCATTGAGGTTTGGT+TGG | 0.460124 | 7.1:+84365182 | None:intergenic |
AAATCAATACCTTGTCAAGA+AGG | 0.466786 | 7.1:-84367224 | MS.gene070625:CDS |
GAAATCTCAGAAGCTATCAT+TGG | 0.467463 | 7.1:+84365008 | None:intergenic |
GTCTTTGAGAAGCGTAATCA+TGG | 0.493003 | 7.1:-84365486 | MS.gene070625:CDS |
AATCATGGAAAGAAAATGAA+TGG | 0.519050 | 7.1:-84365471 | MS.gene070625:CDS |
TCTCCCAAAAGAAAACTCTT+GGG | 0.526665 | 7.1:+84365137 | None:intergenic |
CCAACCAAACCTCAATGGTC+GGG | 0.527531 | 7.1:-84365182 | MS.gene070625:CDS |
ACCAACAGAGCTACTAATGC+TGG | 0.528873 | 7.1:-84366269 | MS.gene070625:CDS |
TCCAACCAAACCTCAATGGT+CGG | 0.539903 | 7.1:-84365183 | MS.gene070625:CDS |
ATGGAAATGACATGCTTCAA+AGG | 0.541226 | 7.1:-84365077 | MS.gene070625:CDS |
GCCAGCATTAGTAGCTCTGT+TGG | 0.543274 | 7.1:+84366268 | None:intergenic |
ACATGCTTCAAAGGTGGTCG+GGG | 0.553685 | 7.1:-84365068 | MS.gene070625:CDS |
CAAAGACAAAGAGATTTACA+AGG | 0.555962 | 7.1:-84366228 | MS.gene070625:CDS |
ACAAGGGAAATTCATTAACT+GGG | 0.558226 | 7.1:-84366211 | MS.gene070625:CDS |
TGATTCCAACCAAACCTCAA+TGG | 0.559757 | 7.1:-84365187 | MS.gene070625:CDS |
TGACATGCTTCAAAGGTGGT+CGG | 0.565490 | 7.1:-84365070 | MS.gene070625:CDS |
GTATTCATGCATGACCCAGT+TGG | 0.566311 | 7.1:+84366136 | None:intergenic |
AATTCACCTGGCAAATCCCA+TGG | 0.572720 | 7.1:+84367142 | None:intergenic |
AGGTCTAACTCCTCTAGAGA+TGG | 0.574295 | 7.1:-84365435 | MS.gene070625:CDS |
CTTCTGTGCTATAGCTATTG+CGG | 0.577625 | 7.1:-84367188 | MS.gene070625:CDS |
TGATGAATTCCCGACCATTG+AGG | 0.581485 | 7.1:+84365173 | None:intergenic |
GAAAAGGTCAAATTTCCCGC+TGG | 0.582719 | 7.1:-84367280 | MS.gene070625:CDS |
GCTGCAAGTCGAGTAGAAGC+TGG | 0.589005 | 7.1:+84365030 | None:intergenic |
TGGAAAGAATCGATAACCAG+CGG | 0.593934 | 7.1:+84367264 | None:intergenic |
TGAATGGTTCAAAACTTGGA+AGG | 0.595179 | 7.1:-84365455 | MS.gene070625:CDS |
GGAAAGAATCGATAACCAGC+GGG | 0.598033 | 7.1:+84367265 | None:intergenic |
CTAAAATGGAAGAAACAGAA+TGG | 0.615381 | 7.1:-84366337 | MS.gene070625:CDS |
TGTGAACCATGGGATTTGCC+AGG | 0.615720 | 7.1:-84367148 | MS.gene070625:intron |
AATTGAACGTCCATCTCTAG+AGG | 0.623412 | 7.1:+84365425 | None:intergenic |
TGTCATCAACCTTCTTGACA+AGG | 0.634308 | 7.1:+84367215 | None:intergenic |
TATGAATAAGTGTGAACCAT+GGG | 0.641317 | 7.1:-84367158 | MS.gene070625:CDS |
AAAGACAAAGAGATTTACAA+GGG | 0.662925 | 7.1:-84366227 | MS.gene070625:CDS |
TGATGCTGATATCTCATCTG+TGG | 0.664657 | 7.1:-84365103 | MS.gene070625:CDS |
GAAATGACATGCTTCAAAGG+TGG | 0.674513 | 7.1:-84365074 | MS.gene070625:CDS |
ATATGAATAAGTGTGAACCA+TGG | 0.681966 | 7.1:-84367159 | MS.gene070625:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTATAAAATATAAATTTT+AGG | - | chr7.1:84366658-84366677 | MS.gene070625:intron | 0.0% |
!!! | ATTATAAAATATAAATTTTA+GGG | - | chr7.1:84366659-84366678 | MS.gene070625:intron | 0.0% |
!!! | TAAAAAAGTTACTTTTATTA+TGG | + | chr7.1:84366630-84366649 | None:intergenic | 10.0% |
!! | TAAATATTATATTAGTAGTC+TGG | - | chr7.1:84365252-84365271 | MS.gene070625:CDS | 15.0% |
!!! | ACTTATGTTATTTTTTAAAG+TGG | - | chr7.1:84365872-84365891 | MS.gene070625:intron | 15.0% |
!!! | AGTTTACTTTATTTAGAAAA+AGG | + | chr7.1:84366591-84366610 | None:intergenic | 15.0% |
!!! | GTGAATTTAATGTTTTTTAT+AGG | - | chr7.1:84365210-84365229 | MS.gene070625:CDS | 15.0% |
!!! | TTATGCTTTCTTATTTTTTT+TGG | - | chr7.1:84365961-84365980 | MS.gene070625:intron | 15.0% |
!!! | TTTTATAATTTGTTACTAAC+AGG | + | chr7.1:84366511-84366530 | None:intergenic | 15.0% |
!! | AAAAGAAGACTTAAATTATG+TGG | - | chr7.1:84365601-84365620 | MS.gene070625:intron | 20.0% |
!! | TAAAAAACATTAAATTCACC+TGG | + | chr7.1:84365209-84365228 | None:intergenic | 20.0% |
!! | TCAAAAAATGGAAATTGAAA+AGG | - | chr7.1:84365040-84365059 | MS.gene070625:CDS | 20.0% |
!!! | TTTAAAGTTGCTAAAAAAAG+AGG | - | chr7.1:84365348-84365367 | MS.gene070625:CDS | 20.0% |
! | AAAATGAATGGTTCAAAACT+TGG | - | chr7.1:84366877-84366896 | MS.gene070625:intron | 25.0% |
! | AAACACTATACAATGACATT+AGG | - | chr7.1:84365555-84365574 | MS.gene070625:intron | 25.0% |
! | AAAGACAAAGAGATTTACAA+GGG | - | chr7.1:84366109-84366128 | MS.gene070625:intron | 25.0% |
! | AAGAAAAAGAAGAAGAAAAG+TGG | - | chr7.1:84365679-84365698 | MS.gene070625:intron | 25.0% |
! | AATCATGGAAAGAAAATGAA+TGG | - | chr7.1:84366865-84366884 | MS.gene070625:intron | 25.0% |
! | AGATAACGACAATATATCTA+AGG | + | chr7.1:84365751-84365770 | None:intergenic | 25.0% |
! | TATATTGTCGTTATCTTTGA+TGG | - | chr7.1:84365755-84365774 | MS.gene070625:intron | 25.0% |
!! | TTTATAAGCTTTTCATCAGT+TGG | + | chr7.1:84365095-84365114 | None:intergenic | 25.0% |
!!! | ATAAATTTTAGGGAAACTAC+TGG | - | chr7.1:84366669-84366688 | MS.gene070625:intron | 25.0% |
!!! | CTTCATTTTTCATCTTAATG+TGG | + | chr7.1:84365534-84365553 | None:intergenic | 25.0% |
!!! | TTCAATTTCCATTTTTTGAC+TGG | + | chr7.1:84365039-84365058 | None:intergenic | 25.0% |
!!! | TTTTTTGGTTTATTCAGAGA+TGG | - | chr7.1:84365976-84365995 | MS.gene070625:intron | 25.0% |
AAATCAATACCTTGTCAAGA+AGG | - | chr7.1:84365112-84365131 | MS.gene070625:CDS | 30.0% | |
ACAAGGGAAATTCATTAACT+GGG | - | chr7.1:84366125-84366144 | MS.gene070625:intron | 30.0% | |
ACAGGTCTTTAGTAAATGTT+TGG | + | chr7.1:84366493-84366512 | None:intergenic | 30.0% | |
ACGTAATTCTATCAAACACA+TGG | + | chr7.1:84366386-84366405 | None:intergenic | 30.0% | |
ATATGAATAAGTGTGAACCA+TGG | - | chr7.1:84365177-84365196 | MS.gene070625:CDS | 30.0% | |
ATGATTTATACTCTGTCTAC+TGG | - | chr7.1:84366330-84366349 | MS.gene070625:CDS | 30.0% | |
ATGTGGTGTATATTTGATTC+AGG | + | chr7.1:84365517-84365536 | None:intergenic | 30.0% | |
CAAAGACAAAGAGATTTACA+AGG | - | chr7.1:84366108-84366127 | MS.gene070625:intron | 30.0% | |
CAATATTATCATTCCATGTG+TGG | + | chr7.1:84366281-84366300 | None:intergenic | 30.0% | |
CTAAAATGGAAGAAACAGAA+TGG | - | chr7.1:84365999-84366018 | MS.gene070625:intron | 30.0% | |
GAATGTTTCCAGTCAAAAAA+TGG | - | chr7.1:84365028-84365047 | MS.gene070625:CDS | 30.0% | |
TACAAGGGAAATTCATTAAC+TGG | - | chr7.1:84366124-84366143 | MS.gene070625:intron | 30.0% | |
TATGAATAAGTGTGAACCAT+GGG | - | chr7.1:84365178-84365197 | MS.gene070625:CDS | 30.0% | |
TTATTCAGAGATGGCTAAAA+TGG | - | chr7.1:84365985-84366004 | MS.gene070625:intron | 30.0% | |
TTCATCCTCTTCAAAACAAA+TGG | - | chr7.1:84367095-84367114 | MS.gene070625:intron | 30.0% | |
! | ATGTTGTCTTCTTGTGTTTT+TGG | + | chr7.1:84367042-84367061 | None:intergenic | 30.0% |
! | CAATTGTTGCTTCAGTTAAA+GGG | + | chr7.1:84367128-84367147 | None:intergenic | 30.0% |
! | TTTGGTTTCTCTGTTTGATT+TGG | + | chr7.1:84367024-84367043 | None:intergenic | 30.0% |
!! | TTTCTCTGTTTGATTTGGAT+TGG | + | chr7.1:84367019-84367038 | None:intergenic | 30.0% |
!!! | AAAACACTGGTTTTCTACAT+AGG | - | chr7.1:84366154-84366173 | MS.gene070625:CDS | 30.0% |
!!! | AACATCCATTTGTTTTGAAG+AGG | + | chr7.1:84367103-84367122 | None:intergenic | 30.0% |
!!! | AACCTTTTTTGTAGAGTGAA+TGG | - | chr7.1:84366815-84366834 | MS.gene070625:intron | 30.0% |
!!! | AATGGTACTTTTTTTGTGTG+AGG | - | chr7.1:84366017-84366036 | MS.gene070625:intron | 30.0% |
!!! | ACCTTTTTTGTAGAGTGAAT+GGG | - | chr7.1:84366816-84366835 | MS.gene070625:intron | 30.0% |
!!! | ATGGTACTTTTTTTGTGTGA+GGG | - | chr7.1:84366018-84366037 | MS.gene070625:intron | 30.0% |
AAAAATACCCAACTGGTCAA+AGG | - | chr7.1:84366044-84366063 | MS.gene070625:intron | 35.0% | |
AACTGGGATGAAAAAAACAC+TGG | - | chr7.1:84366141-84366160 | MS.gene070625:intron | 35.0% | |
ACCCATTCACTCTACAAAAA+AGG | + | chr7.1:84366820-84366839 | None:intergenic | 35.0% | |
ATGGAAATGACATGCTTCAA+AGG | - | chr7.1:84367259-84367278 | MS.gene070625:CDS | 35.0% | |
CCAGATCTAATCAATGACTT+TGG | + | chr7.1:84365470-84365489 | None:intergenic | 35.0% | |
CTTCTAGATCTACCAATGAA+GGG | + | chr7.1:84365662-84365681 | None:intergenic | 35.0% | |
GAAAGAAAAACACCCTTCAT+TGG | - | chr7.1:84365647-84365666 | MS.gene070625:intron | 35.0% | |
GATATCTCATCTGTGGTATA+TGG | - | chr7.1:84367240-84367259 | MS.gene070625:CDS | 35.0% | |
GGATTTGAAAAACTACGTGT+TGG | - | chr7.1:84365273-84365292 | MS.gene070625:CDS | 35.0% | |
GTAAATTTAACCACGTCTAG+TGG | + | chr7.1:84365854-84365873 | None:intergenic | 35.0% | |
TCTCCCAAAAGAAAACTCTT+GGG | + | chr7.1:84367202-84367221 | None:intergenic | 35.0% | |
TCTTCTAGATCTACCAATGA+AGG | + | chr7.1:84365663-84365682 | None:intergenic | 35.0% | |
TGAATGGTTCAAAACTTGGA+AGG | - | chr7.1:84366881-84366900 | MS.gene070625:intron | 35.0% | |
TTATCATTCCATGTGTGGAT+AGG | + | chr7.1:84366276-84366295 | None:intergenic | 35.0% | |
! | CCAAAGTCATTGATTAGATC+TGG | - | chr7.1:84365467-84365486 | MS.gene070625:CDS | 35.0% |
! | GCAATTGTTGCTTCAGTTAA+AGG | + | chr7.1:84367129-84367148 | None:intergenic | 35.0% |
! | TCTCCCAAGAGTTTTCTTTT+GGG | - | chr7.1:84367196-84367215 | MS.gene070625:CDS | 35.0% |
! | TTCTCCCAAGAGTTTTCTTT+TGG | - | chr7.1:84367195-84367214 | MS.gene070625:CDS | 35.0% |
AATTGAACGTCCATCTCTAG+AGG | + | chr7.1:84366914-84366933 | None:intergenic | 40.0% | |
AGGGACAAAAAATACCCAAC+TGG | - | chr7.1:84366037-84366056 | MS.gene070625:intron | 40.0% | |
ATAGGTTGTGCTCAGGAAAA+AGG | + | chr7.1:84366258-84366277 | None:intergenic | 40.0% | |
CTCTCCCAAAAGAAAACTCT+TGG | + | chr7.1:84367203-84367222 | None:intergenic | 40.0% | |
CTGACACATCATAATGTGTC+AGG | - | chr7.1:84365809-84365828 | MS.gene070625:intron | 40.0% | |
CTTCTGTGCTATAGCTATTG+CGG | - | chr7.1:84365148-84365167 | MS.gene070625:CDS | 40.0% | |
GAAATGACATGCTTCAAAGG+TGG | - | chr7.1:84367262-84367281 | MS.gene070625:CDS | 40.0% | |
GACACATTATGATGTGTCAG+TGG | + | chr7.1:84365809-84365828 | None:intergenic | 40.0% | |
GAGCGATGAAAAATCCAACT+GGG | - | chr7.1:84366186-84366205 | MS.gene070625:CDS | 40.0% | |
TGATGCTGATATCTCATCTG+TGG | - | chr7.1:84367233-84367252 | MS.gene070625:CDS | 40.0% | |
TGATTCCAACCAAACCTCAA+TGG | - | chr7.1:84367149-84367168 | MS.gene070625:CDS | 40.0% | |
TGGAAAGAATCGATAACCAG+CGG | + | chr7.1:84365075-84365094 | None:intergenic | 40.0% | |
TGTCATCAACCTTCTTGACA+AGG | + | chr7.1:84365124-84365143 | None:intergenic | 40.0% | |
! | AAGAAAAGTGGTGACGAGTA+GGG | - | chr7.1:84365691-84365710 | MS.gene070625:intron | 40.0% |
! | ATGCATGAATACCGATTGGA+GGG | - | chr7.1:84366211-84366230 | MS.gene070625:CDS | 40.0% |
! | CAGTTGGATTTTTCATCGCT+CGG | + | chr7.1:84366187-84366206 | None:intergenic | 40.0% |
! | GTCTTTGAGAAGCGTAATCA+TGG | - | chr7.1:84366850-84366869 | MS.gene070625:intron | 40.0% |
AATTCACCTGGCAAATCCCA+TGG | + | chr7.1:84365197-84365216 | None:intergenic | 45.0% | |
AATTCCCGACCATTGAGGTT+TGG | + | chr7.1:84367161-84367180 | None:intergenic | 45.0% | |
ACCAACAGAGCTACTAATGC+TGG | - | chr7.1:84366067-84366086 | MS.gene070625:intron | 45.0% | |
AGAGTGAGTTACCCTCCAAT+CGG | + | chr7.1:84366225-84366244 | None:intergenic | 45.0% | |
CGAGCGATGAAAAATCCAAC+TGG | - | chr7.1:84366185-84366204 | MS.gene070625:CDS | 45.0% | |
GAAAAGGTCAAATTTCCCGC+TGG | - | chr7.1:84365056-84365075 | MS.gene070625:CDS | 45.0% | |
GGAAAGAATCGATAACCAGC+GGG | + | chr7.1:84365074-84365093 | None:intergenic | 45.0% | |
GGTCATGCATGAATACCGAT+TGG | - | chr7.1:84366207-84366226 | MS.gene070625:CDS | 45.0% | |
GTATTCATGCATGACCCAGT+TGG | + | chr7.1:84366203-84366222 | None:intergenic | 45.0% | |
TCCAACCAAACCTCAATGGT+CGG | - | chr7.1:84367153-84367172 | MS.gene070625:CDS | 45.0% | |
TGACATGCTTCAAAGGTGGT+CGG | - | chr7.1:84367266-84367285 | MS.gene070625:CDS | 45.0% | |
TGATGAATTCCCGACCATTG+AGG | + | chr7.1:84367166-84367185 | None:intergenic | 45.0% | |
TGTTGGTCCTTTGACCAGTT+GGG | + | chr7.1:84366054-84366073 | None:intergenic | 45.0% | |
! | AGGTCTAACTCCTCTAGAGA+TGG | - | chr7.1:84366901-84366920 | MS.gene070625:intron | 45.0% |
! | CATGCATGAATACCGATTGG+AGG | - | chr7.1:84366210-84366229 | MS.gene070625:CDS | 45.0% |
! | GAAGAAAAGTGGTGACGAGT+AGG | - | chr7.1:84365690-84365709 | MS.gene070625:intron | 45.0% |
! | GAGCTACTAATGCTGGCTAT+TGG | - | chr7.1:84366074-84366093 | MS.gene070625:intron | 45.0% |
ACATGCTTCAAAGGTGGTCG+GGG | - | chr7.1:84367268-84367287 | MS.gene070625:CDS | 50.0% | |
CAACATGACACCACTAGACG+TGG | - | chr7.1:84365841-84365860 | MS.gene070625:intron | 50.0% | |
CCAACCAAACCTCAATGGTC+GGG | - | chr7.1:84367154-84367173 | MS.gene070625:CDS | 50.0% | |
CTGTTGGTCCTTTGACCAGT+TGG | + | chr7.1:84366055-84366074 | None:intergenic | 50.0% | |
GACATGCTTCAAAGGTGGTC+GGG | - | chr7.1:84367267-84367286 | MS.gene070625:CDS | 50.0% | |
GAGCACAACCTATCCACACA+TGG | - | chr7.1:84366265-84366284 | MS.gene070625:CDS | 50.0% | |
TGTGAACCATGGGATTTGCC+AGG | - | chr7.1:84365188-84365207 | MS.gene070625:CDS | 50.0% | |
TGTGTGGATAGGTTGTGCTC+AGG | + | chr7.1:84366265-84366284 | None:intergenic | 50.0% | |
TTGGCGAGGAGAAAAGTGAG+TGG | - | chr7.1:84365715-84365734 | MS.gene070625:intron | 50.0% | |
! | AAGTGGTGACGAGTAGGGTT+TGG | - | chr7.1:84365696-84365715 | MS.gene070625:intron | 50.0% |
! | GCCAGCATTAGTAGCTCTGT+TGG | + | chr7.1:84366071-84366090 | None:intergenic | 50.0% |
!! | CACGTCTAGTGGTGTCATGT+TGG | + | chr7.1:84365843-84365862 | None:intergenic | 50.0% |
GCTGCAAGTCGAGTAGAAGC+TGG | + | chr7.1:84367309-84367328 | None:intergenic | 55.0% | |
! | CCCGACCATTGAGGTTTGGT+TGG | + | chr7.1:84367157-84367176 | None:intergenic | 55.0% |
GTGACGAGTAGGGTTTGGCG+AGG | - | chr7.1:84365701-84365720 | MS.gene070625:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 84365014 | 84367344 | 84365014 | ID=MS.gene070625 |
chr7.1 | mRNA | 84365014 | 84367344 | 84365014 | ID=MS.gene070625.t1;Parent=MS.gene070625 |
chr7.1 | exon | 84367149 | 84367344 | 84367149 | ID=MS.gene070625.t1.exon1;Parent=MS.gene070625.t1 |
chr7.1 | CDS | 84367149 | 84367344 | 84367149 | ID=cds.MS.gene070625.t1;Parent=MS.gene070625.t1 |
chr7.1 | exon | 84366151 | 84366365 | 84366151 | ID=MS.gene070625.t1.exon2;Parent=MS.gene070625.t1 |
chr7.1 | CDS | 84366151 | 84366365 | 84366151 | ID=cds.MS.gene070625.t1;Parent=MS.gene070625.t1 |
chr7.1 | exon | 84365014 | 84365529 | 84365014 | ID=MS.gene070625.t1.exon3;Parent=MS.gene070625.t1 |
chr7.1 | CDS | 84365014 | 84365529 | 84365014 | ID=cds.MS.gene070625.t1;Parent=MS.gene070625.t1 |
Gene Sequence |
Protein sequence |