AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene070626

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene070626.t1 MTR_7g011130 88.068 352 35 2 1 345 1 352 0.0 631
MS.gene070626.t1 MTR_7g011120 83.582 335 29 4 12 345 1 310 0.0 559
MS.gene070626.t1 MTR_3g070030 71.816 369 63 4 1 345 1 352 0.0 518
MS.gene070626.t1 MTR_3g070040 70.423 355 64 6 12 345 1 335 4.15e-172 481
MS.gene070626.t1 MTR_6g012670 52.336 321 120 6 14 330 15 306 2.12e-100 299
MS.gene070626.t1 MTR_4g108760 54.440 259 102 5 13 271 11 253 1.16e-83 258
MS.gene070626.t1 MTR_3g435150 49.329 298 124 7 5 292 2 282 3.51e-81 249
MS.gene070626.t1 MTR_2g078700 55.204 221 73 3 22 223 26 239 2.47e-74 234
MS.gene070626.t1 MTR_6g084430 60.541 185 58 4 19 203 5 174 2.84e-70 222
MS.gene070626.t1 MTR_6g032770 55.909 220 82 6 14 229 13 221 6.75e-70 223
MS.gene070626.t1 MTR_7g085260 57.416 209 74 6 11 213 9 208 3.01e-69 221
MS.gene070626.t1 MTR_3g109340 60.241 166 54 2 19 182 22 177 1.62e-65 211
MS.gene070626.t1 MTR_3g109340 60.241 166 53 2 19 182 22 176 2.96e-65 210
MS.gene070626.t1 MTR_1g008740 59.649 171 56 3 19 186 13 173 2.49e-63 205
MS.gene070626.t1 MTR_1g008740 59.649 171 56 3 19 186 27 187 3.53e-63 205
MS.gene070626.t1 MTR_3g116070 61.783 157 56 3 7 160 12 167 2.60e-60 197
MS.gene070626.t1 MTR_8g059170 51.497 167 74 2 16 182 11 170 3.86e-55 183
MS.gene070626.t1 MTR_5g012080 47.393 211 81 6 22 220 10 202 9.17e-55 183
MS.gene070626.t1 MTR_4g101680 54.938 162 53 3 22 177 10 157 2.49e-54 182
MS.gene070626.t1 MTR_8g024480 51.149 174 82 1 14 184 10 183 1.03e-53 182
MS.gene070626.t1 MTR_4g035590 56.707 164 54 3 22 181 11 161 1.04e-53 180
MS.gene070626.t1 MTR_4g036030 54.088 159 59 2 22 177 10 157 1.57e-53 179
MS.gene070626.t1 MTR_2g079990 48.503 167 77 1 16 182 13 170 7.85e-53 178
MS.gene070626.t1 MTR_2g064470 54.321 162 62 5 16 176 8 158 2.78e-52 175
MS.gene070626.t1 MTR_5g041940 48.824 170 78 2 17 184 1 163 4.38e-52 173
MS.gene070626.t1 MTR_8g094580 49.711 173 77 4 17 187 5 169 7.78e-52 173
MS.gene070626.t1 MTR_3g088110 47.929 169 77 3 16 182 4 163 1.18e-51 173
MS.gene070626.t1 MTR_2g062730 52.439 164 63 3 22 181 13 165 1.77e-51 174
MS.gene070626.t1 MTR_4g081870 48.810 168 77 2 18 183 8 168 2.05e-51 172
MS.gene070626.t1 MTR_2g080010 47.701 174 81 3 15 181 11 181 2.67e-51 174
MS.gene070626.t1 MTR_5g021710 53.459 159 60 3 22 177 11 158 2.86e-51 174
MS.gene070626.t1 MTR_2157s0010 41.250 240 123 5 12 236 1 237 3.64e-51 171
MS.gene070626.t1 MTR_5g069030 39.831 236 120 4 18 251 24 239 1.73e-50 178
MS.gene070626.t1 MTR_7g085220 46.629 178 81 2 12 180 1 173 3.18e-50 171
MS.gene070626.t1 MTR_3g093040 49.425 174 70 3 17 181 106 270 3.51e-50 170
MS.gene070626.t1 MTR_8g076110 45.455 187 88 3 22 205 9 184 7.53e-50 169
MS.gene070626.t1 MTR_7g100990 50.000 168 77 3 11 176 3 165 8.39e-50 169
MS.gene070626.t1 MTR_4g089135 47.126 174 76 3 21 178 17 190 8.56e-50 170
MS.gene070626.t1 MTR_2g079990 44.086 186 85 2 16 182 13 198 9.42e-50 171
MS.gene070626.t1 MTR_3g096920 47.126 174 79 3 16 186 4 167 2.40e-49 167
MS.gene070626.t1 MTR_1g069805 47.337 169 71 3 22 188 13 165 3.15e-49 166
MS.gene070626.t1 MTR_3g093050 52.866 157 63 2 22 176 25 172 4.56e-49 173
MS.gene070626.t1 MTR_1g096430 50.311 161 60 3 22 176 10 156 5.92e-49 167
MS.gene070626.t1 MTR_3g093050 52.866 157 63 2 22 176 25 172 8.31e-49 173
MS.gene070626.t1 MTR_8g467490 48.447 161 77 3 22 178 17 175 3.12e-48 167
MS.gene070626.t1 MTR_0036s0150 50.292 171 71 4 22 189 8 167 8.34e-48 169
MS.gene070626.t1 MTR_6g011860 37.984 258 146 6 22 269 18 271 1.51e-47 165
MS.gene070626.t1 MTR_8g063550 44.000 175 86 3 18 190 5 169 2.45e-47 163
MS.gene070626.t1 MTR_1g090723 41.026 234 118 5 12 242 1 217 5.72e-47 167
MS.gene070626.t1 MTR_1g090723 41.026 234 118 5 12 242 1 217 7.01e-47 168
MS.gene070626.t1 MTR_8g063550 44.000 175 86 3 18 190 5 169 1.00e-46 164
MS.gene070626.t1 MTR_3g096920 56.589 129 55 1 16 144 4 131 1.03e-46 161
MS.gene070626.t1 MTR_5g040420 47.826 161 77 3 22 178 17 174 1.08e-46 163
MS.gene070626.t1 MTR_1g090723 41.026 234 119 5 12 242 1 218 1.63e-46 167
MS.gene070626.t1 MTR_8g063550 44.000 175 86 3 18 190 5 169 1.83e-46 163
MS.gene070626.t1 MTR_7g005280 49.419 172 71 5 13 182 9 166 1.99e-46 158
MS.gene070626.t1 MTR_7g097090 39.676 247 123 7 22 266 13 235 3.24e-46 159
MS.gene070626.t1 MTR_2g064090 57.037 135 52 2 22 150 9 143 6.81e-46 160
MS.gene070626.t1 MTR_2g093810 42.500 200 100 3 19 216 14 200 7.07e-46 159
MS.gene070626.t1 MTR_6g477900 49.383 162 71 2 17 176 4 156 1.94e-45 155
MS.gene070626.t1 MTR_5g076850 41.096 219 108 3 17 223 4 213 2.45e-45 164
MS.gene070626.t1 MTR_3g096140 44.444 171 83 4 22 190 10 170 1.91e-44 154
MS.gene070626.t1 MTR_3g064580 48.148 162 74 2 17 176 4 157 3.47e-44 161
MS.gene070626.t1 MTR_8g093580 42.286 175 89 3 18 190 5 169 5.66e-44 158
MS.gene070626.t1 MTR_4g098630 40.455 220 112 6 15 229 2 207 7.13e-44 154
MS.gene070626.t1 MTR_5g014300 54.545 132 51 2 22 144 9 140 9.43e-44 154
MS.gene070626.t1 MTR_2g086880 54.098 122 55 1 22 142 21 142 1.14e-43 157
MS.gene070626.t1 MTR_3g096140 44.444 171 83 4 22 190 10 170 1.20e-43 154
MS.gene070626.t1 MTR_2g086880 54.098 122 55 1 22 142 21 142 1.28e-43 159
MS.gene070626.t1 MTR_2g068920 43.814 194 93 7 1 182 1 190 5.13e-43 150
MS.gene070626.t1 MTR_2g068880 35.621 306 157 10 22 314 25 303 5.25e-43 151
MS.gene070626.t1 MTR_5g090970 42.690 171 93 2 9 176 10 178 6.89e-43 151
MS.gene070626.t1 MTR_4g134460 45.513 156 73 2 22 176 57 201 2.09e-42 152
MS.gene070626.t1 MTR_5g090970 42.690 171 92 3 9 176 10 177 1.62e-41 147
MS.gene070626.t1 MTR_1g097300 44.444 171 81 4 22 189 22 181 2.81e-41 152
MS.gene070626.t1 MTR_8g023840 57.812 128 48 5 21 143 13 139 5.96e-39 142
MS.gene070626.t1 MTR_2g064730 86.842 76 9 1 220 294 6 81 2.05e-38 132
MS.gene070626.t1 MTR_1g090720 49.068 161 77 2 22 180 45 202 2.13e-38 142
MS.gene070626.t1 MTR_3g096140 42.675 157 78 4 36 190 3 149 8.37e-37 135
MS.gene070626.t1 MTR_8g023860 54.688 128 52 5 21 143 14 140 9.23e-37 137
MS.gene070626.t1 MTR_4g075980 50.000 130 62 1 22 148 18 147 1.21e-36 134
MS.gene070626.t1 MTR_8g099750 39.655 174 91 4 12 180 7 171 4.46e-34 125
MS.gene070626.t1 MTR_3g098810 38.235 170 96 3 12 177 7 171 1.55e-33 124
MS.gene070626.t1 MTR_8g094580 52.033 123 49 4 67 187 1 115 2.91e-33 123
MS.gene070626.t1 MTR_3g098810 43.066 137 72 2 12 144 7 141 9.36e-32 117
MS.gene070626.t1 MTR_8g023930 34.510 255 118 11 21 257 26 249 3.39e-31 123
MS.gene070626.t1 MTR_2g086690 46.512 129 62 4 22 143 7 135 3.59e-31 118
MS.gene070626.t1 MTR_8g023900 34.241 257 119 11 21 258 195 420 4.89e-31 122
MS.gene070626.t1 MTR_8g023900 47.656 128 61 4 21 143 14 140 2.49e-29 117
MS.gene070626.t1 MTR_4g052620 38.690 168 94 4 19 177 5 172 3.17e-30 116
MS.gene070626.t1 MTR_7g105170 38.012 171 93 6 22 184 7 172 1.98e-27 108
MS.gene070626.t1 MTR_4g094302 34.118 170 99 3 21 188 13 171 1.96e-26 104
MS.gene070626.t1 MTR_8g023880 46.099 141 54 7 22 143 10 147 8.96e-26 104
MS.gene070626.t1 MTR_4g094302 38.281 128 69 2 19 144 11 130 1.22e-24 98.6
MS.gene070626.t1 MTR_7g070140 50.000 88 39 2 72 154 17 104 5.75e-23 93.2
MS.gene070626.t1 MTR_8g093790 35.928 167 75 7 17 183 8 142 1.47e-18 82.8
MS.gene070626.t1 MTR_7g083360 31.818 154 92 6 12 155 3 153 1.58e-17 79.0
MS.gene070626.t1 MTR_3g096400 31.707 164 103 4 15 175 3 160 2.85e-17 79.7
MS.gene070626.t1 MTR_4g078875 28.713 202 107 7 19 197 48 235 9.73e-15 73.9
MS.gene070626.t1 MTR_4g088245 29.293 198 107 6 2 180 51 234 2.07e-13 70.5
MS.gene070626.t1 MTR_7g083330 33.333 129 80 5 17 142 16 141 2.49e-13 68.2
MS.gene070626.t1 MTR_8g069160 30.120 166 99 4 2 151 51 215 4.07e-12 65.9
MS.gene070626.t1 MTR_7g083370 31.579 133 85 4 21 150 12 141 7.42e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene070626.t1 AT5G61430 47.059 340 136 9 13 323 10 334 4.46e-87 266
MS.gene070626.t1 AT5G07680 53.933 267 95 7 10 264 8 258 2.18e-85 261
MS.gene070626.t1 AT5G07680 55.039 258 88 7 19 264 3 244 5.32e-84 257
MS.gene070626.t1 AT3G29035 52.941 238 95 2 3 230 8 238 7.16e-80 246
MS.gene070626.t1 AT5G39610 64.205 176 56 1 13 188 14 182 1.01e-74 232
MS.gene070626.t1 AT3G18400 42.991 321 161 7 22 339 8 309 1.37e-71 225
MS.gene070626.t1 AT5G18270 53.846 234 75 9 15 242 17 223 4.90e-70 222
MS.gene070626.t1 AT5G18270 53.846 234 75 9 15 242 17 223 6.99e-70 221
MS.gene070626.t1 AT3G04060 57.488 207 79 5 7 211 8 207 7.70e-70 221
MS.gene070626.t1 AT5G53950 67.516 157 42 2 22 176 20 169 7.73e-69 220
MS.gene070626.t1 AT2G24430 59.091 176 60 2 9 182 6 171 2.70e-66 212
MS.gene070626.t1 AT2G24430 59.091 176 60 2 9 182 6 171 2.70e-66 212
MS.gene070626.t1 AT3G15170 53.589 209 83 3 22 228 23 219 4.77e-65 208
MS.gene070626.t1 AT1G76420 61.146 157 49 2 22 176 25 171 5.75e-63 204
MS.gene070626.t1 AT5G61430 44.056 286 116 9 67 323 1 271 2.68e-61 197
MS.gene070626.t1 AT2G46770 49.733 187 87 2 14 193 11 197 8.24e-56 186
MS.gene070626.t1 AT1G56010 44.053 227 112 7 1 225 1 214 4.62e-55 183
MS.gene070626.t1 AT3G12977 39.167 240 121 5 22 261 21 235 5.95e-55 181
MS.gene070626.t1 AT3G61910 41.322 242 122 3 14 235 6 247 1.33e-54 182
MS.gene070626.t1 AT4G10350 57.055 163 58 3 22 181 12 165 1.97e-54 182
MS.gene070626.t1 AT1G12260 55.975 159 56 3 22 177 10 157 8.82e-54 180
MS.gene070626.t1 AT1G12260 55.975 159 56 3 22 177 10 157 1.06e-53 181
MS.gene070626.t1 AT4G27410 50.610 164 66 3 16 176 11 162 1.37e-53 178
MS.gene070626.t1 AT2G18060 46.269 201 93 4 15 212 5 193 3.90e-53 179
MS.gene070626.t1 AT2G18060 46.269 201 93 4 15 212 5 193 3.90e-53 179
MS.gene070626.t1 AT3G15500 47.305 167 79 1 16 182 11 168 5.43e-53 177
MS.gene070626.t1 AT1G33280 49.741 193 74 5 22 203 11 191 1.21e-52 176
MS.gene070626.t1 AT1G52890 47.904 167 78 1 16 182 11 168 1.61e-52 176
MS.gene070626.t1 AT1G62700 55.346 159 57 3 22 177 10 157 1.72e-52 178
MS.gene070626.t1 AT1G62700 55.346 159 57 3 22 177 10 157 1.72e-52 178
MS.gene070626.t1 AT4G35580 47.895 190 83 4 22 206 12 190 9.92e-52 179
MS.gene070626.t1 AT4G35580 47.895 190 83 4 22 206 12 190 1.31e-51 179
MS.gene070626.t1 AT4G35580 47.895 190 83 4 22 206 12 190 1.45e-51 179
MS.gene070626.t1 AT5G08790 49.102 167 80 2 16 182 4 165 1.81e-51 172
MS.gene070626.t1 AT5G66300 53.125 160 62 3 22 178 15 164 2.06e-51 172
MS.gene070626.t1 AT1G32770 48.901 182 89 2 14 191 11 192 3.06e-51 174
MS.gene070626.t1 AT1G01720 46.154 169 85 2 14 182 2 164 3.42e-51 172
MS.gene070626.t1 AT1G77450 44.330 194 96 4 17 207 8 192 5.51e-51 170
MS.gene070626.t1 AT1G33060 52.866 157 63 2 22 176 27 174 5.73e-51 179
MS.gene070626.t1 AT1G33060 52.866 157 63 2 22 176 27 174 6.46e-51 179
MS.gene070626.t1 AT1G71930 51.266 158 63 3 22 176 12 158 6.73e-51 172
MS.gene070626.t1 AT1G71930 51.266 158 63 3 22 176 12 158 6.73e-51 172
MS.gene070626.t1 AT1G61110 50.943 159 74 2 22 176 19 177 1.54e-50 171
MS.gene070626.t1 AT5G63790 48.837 172 82 3 11 182 43 208 1.94e-50 171
MS.gene070626.t1 AT5G63790 48.837 172 82 3 11 182 53 218 2.27e-50 171
MS.gene070626.t1 AT3G15510 48.256 172 79 3 23 187 21 189 2.80e-50 172
MS.gene070626.t1 AT3G04070 47.917 192 87 4 13 196 4 190 3.23e-50 171
MS.gene070626.t1 AT5G39820 47.093 172 77 2 22 179 23 194 4.92e-50 170
MS.gene070626.t1 AT4G36160 52.201 159 62 3 22 177 13 160 5.18e-50 171
MS.gene070626.t1 AT4G36160 52.201 159 62 3 22 177 13 160 5.18e-50 171
MS.gene070626.t1 AT4G36160 52.201 159 62 3 22 177 17 164 5.99e-50 171
MS.gene070626.t1 AT5G62380 48.876 178 71 4 22 190 10 176 9.19e-50 170
MS.gene070626.t1 AT5G62380 48.876 178 71 4 22 190 10 176 9.19e-50 170
MS.gene070626.t1 AT4G27410 45.856 181 66 4 16 176 11 179 3.74e-49 167
MS.gene070626.t1 AT1G69490 48.485 165 76 2 22 184 12 169 1.33e-48 164
MS.gene070626.t1 AT2G27300 56.349 126 54 1 22 146 17 142 1.75e-48 166
MS.gene070626.t1 AT3G04070 46.667 195 83 4 22 196 13 206 3.00e-48 166
MS.gene070626.t1 AT3G10480 52.761 163 62 3 22 180 30 181 6.73e-48 167
MS.gene070626.t1 AT1G26870 46.111 180 92 2 1 178 1 177 7.44e-48 167
MS.gene070626.t1 AT5G04410 50.000 170 73 3 22 189 12 171 8.62e-48 169
MS.gene070626.t1 AT3G49530 49.686 159 68 3 21 176 15 164 2.19e-47 165
MS.gene070626.t1 AT3G10480 52.439 164 62 3 22 180 30 182 2.45e-47 166
MS.gene070626.t1 AT1G79580 50.299 167 67 4 16 178 14 168 3.01e-47 164
MS.gene070626.t1 AT1G79580 50.299 167 67 4 16 178 14 168 3.01e-47 164
MS.gene070626.t1 AT1G79580 50.299 167 67 4 16 178 14 168 3.01e-47 164
MS.gene070626.t1 AT1G79580 50.299 167 67 4 16 178 14 168 3.01e-47 164
MS.gene070626.t1 AT1G79580 50.299 167 67 4 16 178 14 168 3.01e-47 164
MS.gene070626.t1 AT3G10500 48.235 170 76 3 22 189 12 171 4.81e-47 167
MS.gene070626.t1 AT3G49530 49.686 159 68 3 21 176 15 164 8.84e-47 165
MS.gene070626.t1 AT3G10490 51.852 162 66 3 22 180 30 182 1.03e-46 159
MS.gene070626.t1 AT3G03200 50.920 163 68 3 17 176 4 157 1.05e-45 162
MS.gene070626.t1 AT3G10490 51.852 162 66 3 22 180 30 182 1.28e-45 161
MS.gene070626.t1 AT5G46590 57.480 127 51 2 21 144 8 134 2.09e-45 157
MS.gene070626.t1 AT5G24590 47.826 161 72 3 21 178 15 166 2.94e-45 160
MS.gene070626.t1 AT5G46590 57.937 126 50 2 22 144 9 134 3.91e-45 156
MS.gene070626.t1 AT1G65910 45.455 176 83 3 17 189 4 169 6.02e-45 163
MS.gene070626.t1 AT5G13180 45.665 173 79 4 12 182 7 166 6.35e-45 154
MS.gene070626.t1 AT3G17730 55.725 131 56 1 17 145 4 134 6.80e-45 154
MS.gene070626.t1 AT5G17260 49.693 163 70 3 17 176 4 157 1.34e-44 159
MS.gene070626.t1 AT2G33480 48.171 164 67 3 17 177 13 161 1.57e-44 154
MS.gene070626.t1 AT5G09330 42.614 176 89 3 16 189 3 168 1.79e-44 159
MS.gene070626.t1 AT5G09330 42.614 176 89 3 16 189 3 168 1.79e-44 159
MS.gene070626.t1 AT5G09330 42.614 176 89 3 16 189 3 168 1.79e-44 159
MS.gene070626.t1 AT5G09330 42.614 176 89 3 16 189 3 168 1.79e-44 159
MS.gene070626.t1 AT5G09330 42.614 176 89 3 16 189 3 168 1.79e-44 159
MS.gene070626.t1 AT1G52880 48.750 160 77 2 23 178 21 179 1.84e-44 155
MS.gene070626.t1 AT2G02450 43.478 184 89 3 22 204 54 223 3.08e-44 156
MS.gene070626.t1 AT4G28530 38.938 226 102 6 18 220 9 221 3.53e-44 155
MS.gene070626.t1 AT2G02450 43.478 184 89 3 22 204 54 223 4.14e-44 157
MS.gene070626.t1 AT2G43000 42.308 156 82 1 21 176 20 167 4.41e-44 153
MS.gene070626.t1 AT2G33480 48.447 161 69 3 17 177 13 159 6.85e-44 152
MS.gene070626.t1 AT5G64060 42.045 176 90 4 16 189 3 168 5.18e-43 152
MS.gene070626.t1 AT1G54330 48.765 162 69 2 17 176 4 153 6.34e-43 150
MS.gene070626.t1 AT5G22290 50.388 129 63 1 22 149 24 152 7.61e-43 151
MS.gene070626.t1 AT4G17980 55.118 127 53 2 22 144 9 135 1.76e-42 148
MS.gene070626.t1 AT4G17980 55.118 127 53 2 22 144 9 135 3.32e-42 149
MS.gene070626.t1 AT3G44290 51.163 129 62 1 22 149 17 145 4.73e-42 146
MS.gene070626.t1 AT3G44290 51.163 129 62 1 22 149 17 145 5.32e-41 146
MS.gene070626.t1 AT3G10480 44.162 197 61 4 22 180 30 215 4.74e-40 148
MS.gene070626.t1 AT1G32510 49.296 142 63 2 22 154 9 150 1.69e-39 141
MS.gene070626.t1 AT1G34180 42.857 175 87 4 18 189 14 178 6.17e-39 144
MS.gene070626.t1 AT1G34190 42.857 175 87 4 18 189 14 178 1.78e-38 144
MS.gene070626.t1 AT1G34180 42.857 175 87 4 18 189 14 178 3.40e-38 143
MS.gene070626.t1 AT3G12977 38.660 194 94 5 68 261 14 182 2.10e-37 134
MS.gene070626.t1 AT3G12910 34.586 266 129 9 13 237 15 276 2.25e-37 136
MS.gene070626.t1 AT1G56010 47.500 160 70 6 67 225 1 147 3.73e-37 134
MS.gene070626.t1 AT1G34180 40.107 187 87 4 18 189 14 190 4.01e-37 139
MS.gene070626.t1 AT1G34180 40.107 187 87 4 18 189 14 190 1.93e-36 139
MS.gene070626.t1 AT2G17040 48.507 134 65 2 22 151 9 142 2.54e-36 132
MS.gene070626.t1 AT4G10350 57.895 114 36 3 68 178 11 115 5.86e-35 129
MS.gene070626.t1 AT1G32870 50.758 132 61 2 22 151 13 142 3.38e-34 132
MS.gene070626.t1 AT1G32870 50.758 132 61 2 22 151 13 142 3.42e-34 132
MS.gene070626.t1 AT1G32870 50.758 132 61 2 22 151 49 178 5.26e-34 132
MS.gene070626.t1 AT5G04395 45.775 142 61 2 22 147 31 172 7.86e-32 118
MS.gene070626.t1 AT4G01550 44.030 134 69 4 17 144 2 135 1.74e-28 115
MS.gene070626.t1 AT2G33480 49.541 109 40 2 72 177 8 104 1.90e-28 110
MS.gene070626.t1 AT3G04420 41.270 126 70 2 21 142 5 130 5.33e-26 105
MS.gene070626.t1 AT4G28530 46.296 108 42 1 18 109 9 116 6.55e-26 105
MS.gene070626.t1 AT5G22380 37.059 170 94 7 22 180 8 175 9.38e-26 103
MS.gene070626.t1 AT3G04420 41.270 126 70 2 21 142 5 130 1.07e-25 105
MS.gene070626.t1 AT3G44350 31.513 238 134 9 18 236 4 231 2.43e-25 102
MS.gene070626.t1 AT1G02230 45.736 129 60 6 21 142 5 130 4.54e-25 104
MS.gene070626.t1 AT3G44350 39.597 149 79 6 18 155 4 152 1.83e-24 98.2
MS.gene070626.t1 AT4G01520 37.086 151 80 6 17 160 2 144 5.28e-24 100
MS.gene070626.t1 AT4G01540 37.736 159 78 7 22 173 7 151 5.52e-24 101
MS.gene070626.t1 AT4G01540 37.736 159 78 7 22 173 7 151 5.66e-24 102
MS.gene070626.t1 AT4G01540 37.736 159 78 7 22 173 7 151 8.23e-24 102
MS.gene070626.t1 AT4G01540 37.736 159 78 7 22 173 7 151 9.19e-24 101
MS.gene070626.t1 AT2G18060 45.690 116 51 3 97 212 2 105 1.75e-23 98.6
MS.gene070626.t1 AT5G64530 33.918 171 93 5 21 184 5 162 1.34e-22 94.0
MS.gene070626.t1 AT3G10490 54.444 90 31 2 92 180 2 82 1.08e-21 94.7
MS.gene070626.t1 AT3G10490 54.444 90 31 2 92 180 2 82 1.08e-21 94.7
MS.gene070626.t1 AT1G01010 36.129 155 73 6 21 161 5 147 1.31e-21 95.5
MS.gene070626.t1 AT1G02220 38.095 126 71 3 21 142 5 127 3.01e-21 94.0
MS.gene070626.t1 AT5G64530 36.508 126 66 3 21 144 5 118 3.78e-21 89.0
MS.gene070626.t1 AT1G02250 40.310 129 67 4 21 142 5 130 3.83e-21 93.6
MS.gene070626.t1 AT2G43000 37.113 97 53 1 80 176 1 89 5.88e-18 81.3
MS.gene070626.t1 AT5G22290 59.615 52 21 0 98 149 2 53 9.47e-18 81.6
MS.gene070626.t1 AT5G14000 29.534 193 113 4 7 197 3 174 2.45e-16 77.0
MS.gene070626.t1 AT3G56530 31.343 134 89 2 15 145 48 181 6.48e-16 77.8
MS.gene070626.t1 AT5G50820 32.877 146 80 6 7 144 3 138 1.15e-15 75.1
MS.gene070626.t1 AT5G14000 30.667 150 99 3 7 153 3 150 1.01e-14 71.2
MS.gene070626.t1 AT3G04430 33.557 149 76 5 25 160 6 144 1.33e-14 72.0
MS.gene070626.t1 AT3G55210 29.861 144 87 3 19 148 11 154 6.51e-14 71.6
MS.gene070626.t1 AT4G28500 30.601 183 91 7 19 180 59 226 9.26e-13 68.6

Find 71 sgRNAs with CRISPR-Local

Find 156 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAATTGTTGCTTCAGTTAA+AGG 0.182371 7.1:+84384607 None:intergenic
TTATTCAGTGATGGCTAAAA+TGG 0.255694 7.1:-84385732 MS.gene070626:intron
ATCTCTATTGTCTCCATTGC+TGG 0.263629 7.1:-84384809 MS.gene070626:CDS
TACAAGGGAAATTCATTAAT+CGG 0.266589 7.1:-84385593 MS.gene070626:CDS
GCGTAATTGTGGAAAGAAAA+TGG 0.290534 7.1:-84384890 MS.gene070626:CDS
GATATCTCATCTGTGGTATA+TGG 0.312060 7.1:-84384493 MS.gene070626:CDS
TTTGGTTTCTCTGTTTGATT+TGG 0.323737 7.1:+84384712 None:intergenic
TTCATCCTCTTCAAAACAAA+TGG 0.371961 7.1:-84384638 MS.gene070626:CDS
ATCGGTTGTGCTCAGGAAAA+AGG 0.384221 7.1:+84385462 None:intergenic
CTCTCCCAAAAGAAAACTCT+TGG 0.386693 7.1:+84384533 None:intergenic
GAGCTACTAATGCTGGCTAT+TGG 0.387868 7.1:-84385643 MS.gene070626:CDS
GCCAGCATTAGTAGCTCTAT+TGG 0.388516 7.1:+84385649 None:intergenic
CAATTGTTGCTTCAGTTAAA+GGG 0.406411 7.1:+84384608 None:intergenic
AGAGATGCAATAGTATTTGA+TGG 0.410698 7.1:+84384826 None:intergenic
TATTGGTCCTTTGACCAGTT+GGG 0.417126 7.1:+84385666 None:intergenic
GACATGCTTCAAAGGTGGTC+GGG 0.419512 7.1:-84384466 MS.gene070626:CDS
ACAAGGGAAATTCATTAATC+GGG 0.420542 7.1:-84385592 MS.gene070626:CDS
TTTCTCTGTTTGATTTGGAT+TGG 0.425619 7.1:+84384717 None:intergenic
ATTAGAGAAATCAGAAATAG+TGG 0.434895 7.1:+84384756 None:intergenic
AATTCCCGACCATTGAGGTT+TGG 0.437341 7.1:+84384575 None:intergenic
CTATTGGTCCTTTGACCAGT+TGG 0.441493 7.1:+84385665 None:intergenic
AAAATGGATGGTTCAAAACT+TGG 0.449715 7.1:-84384874 MS.gene070626:CDS
GAAAAGGTCAAATTTGATGC+TGG 0.459107 7.1:-84386546 MS.gene070626:CDS
CCCGACCATTGAGGTTTGGT+TGG 0.460124 7.1:+84384579 None:intergenic
AAATCAATACCTTGTCAAGA+AGG 0.466786 7.1:-84386490 MS.gene070626:CDS
GCTGGCTATTGGAAAGCAAC+AGG 0.467708 7.1:-84385632 MS.gene070626:CDS
TATGAATAAGTTTGAACCAT+GGG 0.479736 7.1:-84386424 MS.gene070626:CDS
GAAATCTCCGAAGCTATCAT+TGG 0.481537 7.1:+84384405 None:intergenic
ACCAATAGAGCTACTAATGC+TGG 0.495849 7.1:-84385650 MS.gene070626:CDS
TTGATTTATAAGCTCTTCAT+CGG 0.497039 7.1:+84386506 None:intergenic
TATTCAGTGATGGCTAAAAT+GGG 0.501147 7.1:-84385731 MS.gene070626:intron
CTTGCAGCCAATGATAGCTT+CGG 0.510026 7.1:-84384412 MS.gene070626:CDS
GATGGCTAAAATGGGAGAAA+CGG 0.521245 7.1:-84385723 MS.gene070626:CDS
TCTCCCAAAAGAAAACTCTT+GGG 0.526665 7.1:+84384534 None:intergenic
CCAACCAAACCTCAATGGTC+GGG 0.527531 7.1:-84384579 MS.gene070626:CDS
TTTATAAGCTCTTCATCGGT+CGG 0.536559 7.1:+84386510 None:intergenic
AGGGACAGAAAATACCCAAC+TGG 0.538414 7.1:-84385680 MS.gene070626:CDS
TCCAACCAAACCTCAATGGT+CGG 0.539903 7.1:-84384580 MS.gene070626:CDS
ATGGAAATGACATGCTTCAA+AGG 0.541226 7.1:-84384474 MS.gene070626:CDS
CAACCGATCCACACATGGAA+TGG 0.549333 7.1:-84385447 MS.gene070626:intron
TGTGTGGATCGGTTGTGCTC+AGG 0.549723 7.1:+84385455 None:intergenic
GTCTTTGAGAAGCGTAATTG+TGG 0.550437 7.1:-84384901 MS.gene070626:CDS
ACATGCTTCAAAGGTGGTCG+GGG 0.553685 7.1:-84384465 MS.gene070626:CDS
AATTCACCTGGTAAATCCCA+TGG 0.558848 7.1:+84386408 None:intergenic
TGATTCCAACCAAACCTCAA+TGG 0.559757 7.1:-84384584 MS.gene070626:CDS
TTACCATTCCATGTGTGGAT+CGG 0.563735 7.1:+84385444 None:intergenic
TGACATGCTTCAAAGGTGGT+CGG 0.565490 7.1:-84384467 MS.gene070626:CDS
GTATTCATGCATGACCCAGT+TGG 0.566311 7.1:+84385517 None:intergenic
CAAAGACAAAGAGATTTACA+AGG 0.568333 7.1:-84385609 MS.gene070626:CDS
CAATATTACCATTCCATGTG+TGG 0.569497 7.1:+84385439 None:intergenic
TTTGAACCATGGGATTTACC+AGG 0.572917 7.1:-84386414 MS.gene070626:intron
AATTGTGGAAAGAAAATGGA+TGG 0.577198 7.1:-84384886 MS.gene070626:CDS
TGATGAATTCCCGACCATTG+AGG 0.581485 7.1:+84384570 None:intergenic
AGAGTGAGTTACCCTCCAAT+CGG 0.585613 7.1:+84385495 None:intergenic
GGTCATGCATGAATACCGAT+TGG 0.588791 7.1:-84385510 MS.gene070626:CDS
GCTGCAAGTCGAGTAGAAGC+TGG 0.589005 7.1:+84384427 None:intergenic
ATTTGATGGTCCTTCTCTAG+AGG 0.592265 7.1:+84384840 None:intergenic
CATGCATGAATACCGATTGG+AGG 0.592763 7.1:-84385507 MS.gene070626:CDS
TGGATGGTTCAAAACTTGGA+AGG 0.595179 7.1:-84384870 MS.gene070626:CDS
GAAAATACCCAACTGGTCAA+AGG 0.598845 7.1:-84385673 MS.gene070626:CDS
CTAAAATGGGAGAAACGGAA+TGG 0.600206 7.1:-84385718 MS.gene070626:CDS
AGGTCTAACTCCTCTAGAGA+AGG 0.604208 7.1:-84384850 MS.gene070626:CDS
ATATGAATAAGTTTGAACCA+TGG 0.611857 7.1:-84386425 MS.gene070626:CDS
ATGCATGAATACCGATTGGA+GGG 0.621001 7.1:-84385506 MS.gene070626:CDS
TATGGAGAATAATCCAGCAA+TGG 0.622304 7.1:+84384796 None:intergenic
GAGCACAACCGATCCACACA+TGG 0.630980 7.1:-84385452 MS.gene070626:CDS
TGTCATCAACCTTCTTGACA+AGG 0.634308 7.1:+84386481 None:intergenic
AAAGACAAAGAGATTTACAA+GGG 0.662925 7.1:-84385608 MS.gene070626:CDS
TGATGCTGATATCTCATCTG+TGG 0.664657 7.1:-84384500 MS.gene070626:CDS
GAAATGACATGCTTCAAAGG+TGG 0.674513 7.1:-84384471 MS.gene070626:CDS
TACATAGGAAGAGCTCCAAG+AGG 0.736988 7.1:-84385548 MS.gene070626:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAATTGATTTTTTGATAA+AGG + chr7.1:84385869-84385888 None:intergenic 10.0%
!! AAAAAGAAAGAAAAACAATT+TGG - chr7.1:84384921-84384940 MS.gene070626:CDS 15.0%
!! GTTACACATTAATATTAAAT+GGG + chr7.1:84386037-84386056 None:intergenic 15.0%
!!! AATAATTCTTTTCAAAATCA+CGG + chr7.1:84385689-84385708 None:intergenic 15.0%
!!! AATTATGCTTTCTTATTTTT+TGG - chr7.1:84385234-84385253 MS.gene070626:intron 15.0%
!!! AGTTTACTTTATTTAGAAAA+AGG + chr7.1:84385815-84385834 None:intergenic 15.0%
!!! GTGAATTTAATGTTTTTTAT+AGG - chr7.1:84384598-84384617 MS.gene070626:CDS 15.0%
!! GGTTACACATTAATATTAAA+TGG + chr7.1:84386038-84386057 None:intergenic 20.0%
!! TAAAAAACATTAAATTCACC+TGG + chr7.1:84384597-84384616 None:intergenic 20.0%
!! TCAAAAAATGGAAAATGAAA+AGG - chr7.1:84384428-84384447 MS.gene070626:CDS 20.0%
!!! AAAATTTGCTCAAATTACAA+GGG - chr7.1:84384791-84384810 MS.gene070626:CDS 20.0%
!!! ATAAATTTTAGAGAAACTAC+TGG - chr7.1:84385893-84385912 MS.gene070626:intron 20.0%
!!! TTCATTTTCCATTTTTTGAT+TGG + chr7.1:84384427-84384446 None:intergenic 20.0%
! AAAGACAAAGAGATTTACAA+GGG - chr7.1:84385382-84385401 MS.gene070626:intron 25.0%
! AACAGATCTTAGTAATTGTT+TGG + chr7.1:84385766-84385785 None:intergenic 25.0%
! AAGAAACGAGAATATATCTA+AGG + chr7.1:84385022-84385041 None:intergenic 25.0%
! ACGTAATTATATCAAACACA+TGG + chr7.1:84385659-84385678 None:intergenic 25.0%
! ACTGTACAAAATCAATGATA+TGG - chr7.1:84384724-84384743 MS.gene070626:CDS 25.0%
! ATATGAATAAGTTTGAACCA+TGG - chr7.1:84384565-84384584 MS.gene070626:CDS 25.0%
! ATGATTTCTACTTTGACTAT+AGG - chr7.1:84385603-84385622 MS.gene070626:CDS 25.0%
! ATTAGAGAAATCAGAAATAG+TGG + chr7.1:84386237-84386256 None:intergenic 25.0%
! GATAAAGGTTACATTTATCA+TGG + chr7.1:84385854-84385873 None:intergenic 25.0%
! GTATGTTTCCAATCAAAAAA+TGG - chr7.1:84384416-84384435 MS.gene070626:CDS 25.0%
! TACAAGGGAAATTCATTAAT+CGG - chr7.1:84385397-84385416 MS.gene070626:intron 25.0%
! TATGAATAAGTTTGAACCAT+GGG - chr7.1:84384566-84384585 MS.gene070626:CDS 25.0%
! TCATAAAAACATACCAAAGA+AGG - chr7.1:84384866-84384885 MS.gene070626:CDS 25.0%
! TTGATTTATAAGCTCTTCAT+CGG + chr7.1:84384487-84384506 None:intergenic 25.0%
!! AAATTTGCTCAAATTACAAG+GGG - chr7.1:84384792-84384811 MS.gene070626:CDS 25.0%
!! CAAAATTTGCTCAAATTACA+AGG - chr7.1:84384790-84384809 MS.gene070626:CDS 25.0%
!! CTTGTAATTTGAGCAAATTT+TGG + chr7.1:84384792-84384811 None:intergenic 25.0%
!!! GTTTGATTTTCACTATTGTA+TGG + chr7.1:84386215-84386234 None:intergenic 25.0%
!!! TTTTTTGGTTTATTCAGTGA+TGG - chr7.1:84385249-84385268 MS.gene070626:intron 25.0%
AAAATGGATGGTTCAAAACT+TGG - chr7.1:84386116-84386135 MS.gene070626:intron 30.0%
AAATCAATACCTTGTCAAGA+AGG - chr7.1:84384500-84384519 MS.gene070626:CDS 30.0%
AATTGTGGAAAGAAAATGGA+TGG - chr7.1:84386104-84386123 MS.gene070626:intron 30.0%
ACAAAATCAATGATATGGCA+GGG - chr7.1:84384729-84384748 MS.gene070626:CDS 30.0%
ACAAGGGAAATTCATTAATC+GGG - chr7.1:84385398-84385417 MS.gene070626:intron 30.0%
AGAGATGCAATAGTATTTGA+TGG + chr7.1:84386167-84386186 None:intergenic 30.0%
ATTCTCGTTTCTTACTTTGA+TGG - chr7.1:84385029-84385048 MS.gene070626:intron 30.0%
CAAAGACAAAGAGATTTACA+AGG - chr7.1:84385381-84385400 MS.gene070626:intron 30.0%
CACATAATTTAAGCCTTCTT+TGG + chr7.1:84384882-84384901 None:intergenic 30.0%
CCTATAATATAGACCATTTC+CGG - chr7.1:84384673-84384692 MS.gene070626:CDS 30.0%
CGGAAATGGTCTATATTATA+GGG + chr7.1:84384675-84384694 None:intergenic 30.0%
CTATAATATAGACCATTTCC+GGG - chr7.1:84384674-84384693 MS.gene070626:CDS 30.0%
GAAAGAAAAACAATTTGGAG+TGG - chr7.1:84384926-84384945 MS.gene070626:intron 30.0%
GAAATGGTCTATATTATAGG+GGG + chr7.1:84384673-84384692 None:intergenic 30.0%
GGAAATGGTCTATATTATAG+GGG + chr7.1:84384674-84384693 None:intergenic 30.0%
GTTGAAAGACATACATACAT+TGG + chr7.1:84385202-84385221 None:intergenic 30.0%
TACAAAATCAATGATATGGC+AGG - chr7.1:84384728-84384747 MS.gene070626:CDS 30.0%
TATTCAGTGATGGCTAAAAT+GGG - chr7.1:84385259-84385278 MS.gene070626:intron 30.0%
TTATTCAGTGATGGCTAAAA+TGG - chr7.1:84385258-84385277 MS.gene070626:intron 30.0%
TTCATCCTCTTCAAAACAAA+TGG - chr7.1:84386352-84386371 MS.gene070626:intron 30.0%
! AATTTGCTCAAATTACAAGG+GGG - chr7.1:84384793-84384812 MS.gene070626:CDS 30.0%
! ATGTTGTCTTCTTGTGTTTT+TGG + chr7.1:84386299-84386318 None:intergenic 30.0%
! CAATTGTTGCTTCAGTTAAA+GGG + chr7.1:84386385-84386404 None:intergenic 30.0%
! CTTTTCTCCTTACAAATGAA+GGG + chr7.1:84384982-84385001 None:intergenic 30.0%
! TCTTTTCTCCTTACAAATGA+AGG + chr7.1:84384983-84385002 None:intergenic 30.0%
! TTTGGTTTCTCTGTTTGATT+TGG + chr7.1:84386281-84386300 None:intergenic 30.0%
!! GTTTAGGTTTAATTTTGTCC+CGG + chr7.1:84384957-84384976 None:intergenic 30.0%
!! TTTCTCTGTTTGATTTGGAT+TGG + chr7.1:84386276-84386295 None:intergenic 30.0%
!!! AAAACACTGGTTTTCTACAT+AGG - chr7.1:84385427-84385446 MS.gene070626:intron 30.0%
!!! AACATCCATTTGTTTTGAAG+AGG + chr7.1:84386360-84386379 None:intergenic 30.0%
!!! AACCTTTTTTGTAGAGTGAA+TGG - chr7.1:84386054-84386073 MS.gene070626:intron 30.0%
!!! AATGGTATTTTTTCTGTGTG+AGG - chr7.1:84385290-84385309 MS.gene070626:intron 30.0%
!!! ACCTTTTTTGTAGAGTGAAT+GGG - chr7.1:84386055-84386074 MS.gene070626:intron 30.0%
!!! ATGGTATTTTTTCTGTGTGA+GGG - chr7.1:84385291-84385310 MS.gene070626:intron 30.0%
AAAATCAATGATATGGCAGG+GGG - chr7.1:84384731-84384750 MS.gene070626:CDS 35.0%
AACACATTATGATGTGTCAG+TGG + chr7.1:84385083-84385102 None:intergenic 35.0%
AAGAGGTGAAAAATCCAACT+GGG - chr7.1:84385459-84385478 MS.gene070626:CDS 35.0%
AATCGGGATGAAAAAAACAC+TGG - chr7.1:84385414-84385433 MS.gene070626:intron 35.0%
ACCCATTCACTCTACAAAAA+AGG + chr7.1:84386059-84386078 None:intergenic 35.0%
ATGGAAATGACATGCTTCAA+AGG - chr7.1:84386516-84386535 MS.gene070626:CDS 35.0%
CAAAATCAATGATATGGCAG+GGG - chr7.1:84384730-84384749 MS.gene070626:CDS 35.0%
CAATATTACCATTCCATGTG+TGG + chr7.1:84385554-84385573 None:intergenic 35.0%
CCGGAAATGGTCTATATTAT+AGG + chr7.1:84384676-84384695 None:intergenic 35.0%
CTGACACATCATAATGTGTT+AGG - chr7.1:84385083-84385102 MS.gene070626:intron 35.0%
CTGGTACTTTGAGCAAATTT+CGG + chr7.1:84384761-84384780 None:intergenic 35.0%
GAAAAGGTCAAATTTGATGC+TGG - chr7.1:84384444-84384463 MS.gene070626:CDS 35.0%
GATATCTCATCTGTGGTATA+TGG - chr7.1:84386497-84386516 MS.gene070626:CDS 35.0%
GCGTAATTGTGGAAAGAAAA+TGG - chr7.1:84386100-84386119 MS.gene070626:intron 35.0%
TAAACCACCCTTCATTTGTA+AGG - chr7.1:84384972-84384991 MS.gene070626:intron 35.0%
TATGGAGAATAATCCAGCAA+TGG + chr7.1:84386197-84386216 None:intergenic 35.0%
TCTCCCAAAAGAAAACTCTT+GGG + chr7.1:84386459-84386478 None:intergenic 35.0%
TTACAAATGAAGGGTGGTTT+AGG + chr7.1:84384973-84384992 None:intergenic 35.0%
TTTATAAGCTCTTCATCGGT+CGG + chr7.1:84384483-84384502 None:intergenic 35.0%
TTTGTAAGGAGAAAAGAGAG+TGG - chr7.1:84384986-84385005 MS.gene070626:intron 35.0%
! AAATTTGCTCAAAGTACCAG+GGG - chr7.1:84384761-84384780 MS.gene070626:CDS 35.0%
! GAAATTTGCTCAAAGTACCA+GGG - chr7.1:84384760-84384779 MS.gene070626:CDS 35.0%
! GCAATTGTTGCTTCAGTTAA+AGG + chr7.1:84386386-84386405 None:intergenic 35.0%
! TCTCCCAAGAGTTTTCTTTT+GGG - chr7.1:84386453-84386472 MS.gene070626:CDS 35.0%
! TTCTCCCAAGAGTTTTCTTT+TGG - chr7.1:84386452-84386471 MS.gene070626:CDS 35.0%
AATTCACCTGGTAAATCCCA+TGG + chr7.1:84384585-84384604 None:intergenic 40.0%
ACCAATAGAGCTACTAATGC+TGG - chr7.1:84385340-84385359 MS.gene070626:intron 40.0%
ATCTCTATTGTCTCCATTGC+TGG - chr7.1:84386181-84386200 MS.gene070626:intron 40.0%
CAACATGACACTAATAGACG+TGG - chr7.1:84385115-84385134 MS.gene070626:intron 40.0%
CAAGAGGTGAAAAATCCAAC+TGG - chr7.1:84385458-84385477 MS.gene070626:CDS 40.0%
CACGTCTATTAGTGTCATGT+TGG + chr7.1:84385117-84385136 None:intergenic 40.0%
CTAAAATGGGAGAAACGGAA+TGG - chr7.1:84385272-84385291 MS.gene070626:intron 40.0%
CTCTCCCAAAAGAAAACTCT+TGG + chr7.1:84386460-84386479 None:intergenic 40.0%
GAAAATACCCAACTGGTCAA+AGG - chr7.1:84385317-84385336 MS.gene070626:intron 40.0%
GAAATCTCCGAAGCTATCAT+TGG + chr7.1:84386588-84386607 None:intergenic 40.0%
GAAATGACATGCTTCAAAGG+TGG - chr7.1:84386519-84386538 MS.gene070626:CDS 40.0%
GATGGCTAAAATGGGAGAAA+CGG - chr7.1:84385267-84385286 MS.gene070626:intron 40.0%
TATTGGTCCTTTGACCAGTT+GGG + chr7.1:84385327-84385346 None:intergenic 40.0%
TGATGCTGATATCTCATCTG+TGG - chr7.1:84386490-84386509 MS.gene070626:CDS 40.0%
TGATTCCAACCAAACCTCAA+TGG - chr7.1:84386406-84386425 MS.gene070626:intron 40.0%
TGGATGGTTCAAAACTTGGA+AGG - chr7.1:84386120-84386139 MS.gene070626:intron 40.0%
TGTCATCAACCTTCTTGACA+AGG + chr7.1:84384512-84384531 None:intergenic 40.0%
TTACCATTCCATGTGTGGAT+CGG + chr7.1:84385549-84385568 None:intergenic 40.0%
TTCTCCTTACAAATGAAGGG+TGG + chr7.1:84384979-84384998 None:intergenic 40.0%
TTGTACAGTCAGATGACCTA+GGG + chr7.1:84384713-84384732 None:intergenic 40.0%
TTTGAACCATGGGATTTACC+AGG - chr7.1:84384576-84384595 MS.gene070626:CDS 40.0%
TTTGTACAGTCAGATGACCT+AGG + chr7.1:84384714-84384733 None:intergenic 40.0%
! AATTTGCTCAAAGTACCAGG+GGG - chr7.1:84384762-84384781 MS.gene070626:CDS 40.0%
! ACAATTTGGAGTGGTGATTC+CGG - chr7.1:84384935-84384954 MS.gene070626:intron 40.0%
! ATGCATGAATACCGATTGGA+GGG - chr7.1:84385484-84385503 MS.gene070626:CDS 40.0%
! ATTTGATGGTCCTTCTCTAG+AGG + chr7.1:84386153-84386172 None:intergenic 40.0%
! CAGTTGGATTTTTCACCTCT+TGG + chr7.1:84385460-84385479 None:intergenic 40.0%
! CGAAATTTGCTCAAAGTACC+AGG - chr7.1:84384759-84384778 MS.gene070626:CDS 40.0%
! GTCTTTGAGAAGCGTAATTG+TGG - chr7.1:84386089-84386108 MS.gene070626:intron 40.0%
!!! GGTATTTTGAAACCCGGAAA+TGG + chr7.1:84384689-84384708 None:intergenic 40.0%
AATTCCCGACCATTGAGGTT+TGG + chr7.1:84386418-84386437 None:intergenic 45.0%
AGAGTGAGTTACCCTCCAAT+CGG + chr7.1:84385498-84385517 None:intergenic 45.0%
AGGGACAGAAAATACCCAAC+TGG - chr7.1:84385310-84385329 MS.gene070626:intron 45.0%
ATCGGTTGTGCTCAGGAAAA+AGG + chr7.1:84385531-84385550 None:intergenic 45.0%
CTATTGGTCCTTTGACCAGT+TGG + chr7.1:84385328-84385347 None:intergenic 45.0%
CTTGCAGCCAATGATAGCTT+CGG - chr7.1:84386578-84386597 MS.gene070626:CDS 45.0%
GGTCATGCATGAATACCGAT+TGG - chr7.1:84385480-84385499 MS.gene070626:CDS 45.0%
GTATTCATGCATGACCCAGT+TGG + chr7.1:84385476-84385495 None:intergenic 45.0%
TACATAGGAAGAGCTCCAAG+AGG - chr7.1:84385442-84385461 MS.gene070626:intron 45.0%
TCCAACCAAACCTCAATGGT+CGG - chr7.1:84386410-84386429 MS.gene070626:intron 45.0%
TGACATGCTTCAAAGGTGGT+CGG - chr7.1:84386523-84386542 MS.gene070626:CDS 45.0%
TGATGAATTCCCGACCATTG+AGG + chr7.1:84386423-84386442 None:intergenic 45.0%
TGTACAGTCAGATGACCTAG+GGG + chr7.1:84384712-84384731 None:intergenic 45.0%
! AGGTCTAACTCCTCTAGAGA+AGG - chr7.1:84386140-84386159 MS.gene070626:intron 45.0%
! CAATTTGGAGTGGTGATTCC+GGG - chr7.1:84384936-84384955 MS.gene070626:intron 45.0%
! CATGCATGAATACCGATTGG+AGG - chr7.1:84385483-84385502 MS.gene070626:CDS 45.0%
! GAGCTACTAATGCTGGCTAT+TGG - chr7.1:84385347-84385366 MS.gene070626:intron 45.0%
! GCCAGCATTAGTAGCTCTAT+TGG + chr7.1:84385344-84385363 None:intergenic 45.0%
!!! GCAAATTTTGGTTTACCCCC+TGG + chr7.1:84384780-84384799 None:intergenic 45.0%
!!! TAGGGGGGTATTTTGAAACC+CGG + chr7.1:84384695-84384714 None:intergenic 45.0%
!!! TTGTTTTTATATAATATTAT+AGG - chr7.1:84384631-84384650 MS.gene070626:CDS 5.0%
ACATGCTTCAAAGGTGGTCG+GGG - chr7.1:84386525-84386544 MS.gene070626:CDS 50.0%
ACGTTGTTCGTCGTCCTCTT+TGG + chr7.1:84384828-84384847 None:intergenic 50.0%
CAACCGATCCACACATGGAA+TGG - chr7.1:84385543-84385562 MS.gene070626:CDS 50.0%
CCAACCAAACCTCAATGGTC+GGG - chr7.1:84386411-84386430 MS.gene070626:intron 50.0%
GACATGCTTCAAAGGTGGTC+GGG - chr7.1:84386524-84386543 MS.gene070626:CDS 50.0%
GCTGGCTATTGGAAAGCAAC+AGG - chr7.1:84385358-84385377 MS.gene070626:intron 50.0%
GGGGGTAAACTGAACCAAAG+AGG - chr7.1:84384811-84384830 MS.gene070626:CDS 50.0%
GGGTTTCAAAATACCCCCCT+AGG - chr7.1:84384694-84384713 MS.gene070626:CDS 50.0%
GTACAGTCAGATGACCTAGG+GGG + chr7.1:84384711-84384730 None:intergenic 50.0%
TACAGTCAGATGACCTAGGG+GGG + chr7.1:84384710-84384729 None:intergenic 50.0%
GAGCACAACCGATCCACACA+TGG - chr7.1:84385538-84385557 MS.gene070626:CDS 55.0%
GCTGCAAGTCGAGTAGAAGC+TGG + chr7.1:84386566-84386585 None:intergenic 55.0%
TGTGTGGATCGGTTGTGCTC+AGG + chr7.1:84385538-84385557 None:intergenic 55.0%
! CCCGACCATTGAGGTTTGGT+TGG + chr7.1:84386414-84386433 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 84384402 84386610 84384402 ID=MS.gene070626
chr7.1 mRNA 84384402 84386610 84384402 ID=MS.gene070626.t1;Parent=MS.gene070626
chr7.1 exon 84386415 84386610 84386415 ID=MS.gene070626.t1.exon1;Parent=MS.gene070626.t1
chr7.1 CDS 84386415 84386610 84386415 ID=cds.MS.gene070626.t1;Parent=MS.gene070626.t1
chr7.1 exon 84385448 84385746 84385448 ID=MS.gene070626.t1.exon2;Parent=MS.gene070626.t1
chr7.1 CDS 84385448 84385746 84385448 ID=cds.MS.gene070626.t1;Parent=MS.gene070626.t1
chr7.1 exon 84384402 84384944 84384402 ID=MS.gene070626.t1.exon3;Parent=MS.gene070626.t1
chr7.1 CDS 84384402 84384944 84384402 ID=cds.MS.gene070626.t1;Parent=MS.gene070626.t1
Gene Sequence

>MS.gene070626

ATGGGATCAAATGAGTATGTTTCCAATCAAAAAATGGAAAATGAAAAGGTCAAATTTGATGCTGGTTTTCGATTCTTTCCGACCGATGAAGAGCTTATAAATCAATACCTTGTCAAGAAGGTTGATGACAATAGCTTCTGTGCTATAGCTATTGCTGAAGTTGATATGAATAAGTTTGAACCATGGGATTTACCAGGTGAATTTAATGTTTTTTATAGGCAAATATTAGTTGTTTTTATATAATATTATAGGATTAATAGTGTTTTTACCCCCTATAATATAGACCATTTCCGGGTTTCAAAATACCCCCCTAGGTCATCTGACTGTACAAAATCAATGATATGGCAGGGGGTAAACCGAAATTTGCTCAAAGTACCAGGGGGTAAACCAAAATTTGCTCAAATTACAAGGGGGTAAACTGAACCAAAGAGGACGACGAACAACGTCGTACTAAGACGACGAAATCATAAAAACATACCAAAGAAGGCTTAAATTATGTGAAGTCACTTATTTATCTAAAAAAAGAAAGAAAAACAATTTGGAGTGGTGATTCCGGGACAAAATTAAACCTAAACCACCCTTCATTTGTAAGGAGAAAAGAGAGTGGTTTAATTACACCTTAGATATATTCTCGTTTCTTACTTTGATGGTTATATGTTTTCTCTTAATTACTATGTACCACTGACACATCATAATGTGTTAGGTATATGCACCAACATGACACTAATAGACGTGGTTAAATTTAATTATTTTATTTTTTAAAGTGATTATGAGTGTCAATTTTGTCAGTGTCATGTCCAATGTATGTATGTCTTTCAACGTTTCATAACTTAATTATGCTTTCTTATTTTTTGGTTTATTCAGTGATGGCTAAAATGGGAGAAACGGAATGGTATTTTTTCTGTGTGAGGGACAGAAAATACCCAACTGGTCAAAGGACCAATAGAGCTACTAATGCTGGCTATTGGAAAGCAACAGGCAAAGACAAAGAGATTTACAAGGGAAATTCATTAATCGGGATGAAAAAAACACTGGTTTTCTACATAGGAAGAGCTCCAAGAGGTGAAAAATCCAACTGGGTCATGCATGAATACCGATTGGAGGGTAACTCACTCTCTAAGCACAACCTTTTTCCTGAGCACAACCGATCCACACATGGAATGGTAATATTGCTATATTTTTTATTACTTTGTTTTTGTCAATGATTTCTACTTTGACTATAGGTGAAAATTTATTAGTGTATGTTCACATCGACCATGTGTTTGATATAATTACGTTATATTACCGTGATTTTGAAAAGAATTATTTTTTTTAAATTTTAACAAAGTTAGCATTTTATCATTGTCAAACTTATCGTCGATCCAAACAATTACTAAGATCTGTTTGTAACAAATTATAAAAATTTAATTTCCTTTTTCTAAATAAAGTAAACTATTTTATGTTTGATCACCATGATAAATGTAACCTTTATCAAAAAATCAATTATAAAATATAAATTTTAGAGAAACTACTGGAAACAACTTTTTGTTTGAAACATATATAATATTCTTTCAAATAGTATTTTATTTAAAAACACTTTAATAAATGAATGAATACTAAATAATGATAGTGTTTTTTAAATAATGTCTTTTTCCCATTTAATATTAATGTGTAACCTTTTTTGTAGAGTGAATGGGTTGTCACTAGAGTCTTTGAGAAGCGTAATTGTGGAAAGAAAATGGATGGTTCAAAACTTGGAAGGTCTAACTCCTCTAGAGAAGGACCATCAAATACTATTGCATCTCTATTGTCTCCATTGCTGGATTATTCTCCATACAATAGTGAAAATCAAACCACTATTTCTGATTTCTCTAATGTGTTGAATTCATTCACCAATCCAAATCAAACAGAGAAACCAAAAACACAAGAAGACAACATTGTTCATAACAATGAAACTAGTATCATGAACATTTCATCCTCTTCAAAACAAATGGATGTTTACCCTTTAACTGAAGCAACAATTGCTGATTCCAACCAAACCTCAATGGTCGGGAATTCATCAAACTTTTTCTTCTCCCAAGAGTTTTCTTTTGGGAGAGACTTTGATGCTGATGCTGATATCTCATCTGTGGTATATGGAAATGACATGCTTCAAAGGTGGTCGGGGAATCAAGATTTGTCACCAGCTTCTACTCGACTTGCAGCCAATGATAGCTTCGGAGATTTCTGA
Protein sequence

>MS.gene070626.t1

MGSNEYVSNQKMENEKVKFDAGFRFFPTDEELINQYLVKKVDDNSFCAIAIAEVDMNKFEPWDLPVMAKMGETEWYFFCVRDRKYPTGQRTNRATNAGYWKATGKDKEIYKGNSLIGMKKTLVFYIGRAPRGEKSNWVMHEYRLEGNSLSKHNLFPEHNRSTHGMSEWVVTRVFEKRNCGKKMDGSKLGRSNSSREGPSNTIASLLSPLLDYSPYNSENQTTISDFSNVLNSFTNPNQTEKPKTQEDNIVHNNETSIMNISSSSKQMDVYPLTEATIADSNQTSMVGNSSNFFFSQEFSFGRDFDADADISSVVYGNDMLQRWSGNQDLSPASTRLAANDSFGDF