Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07063.t1 | XP_003625977.1 | 80.8 | 266 | 49 | 2 | 1 | 265 | 1 | 265 | 1.30E-99 | 372.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07063.t1 | O64747 | 51.0 | 102 | 49 | 1 | 1 | 101 | 162 | 263 | 2.9e-20 | 100.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07063.t1 | G7KSU4 | 80.8 | 266 | 49 | 2 | 1 | 265 | 1 | 265 | 9.2e-100 | 372.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene07063.t1 | TF | WRKY |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07063.t1 | MTR_7g109600 | 96.241 | 266 | 8 | 2 | 1 | 265 | 1 | 265 | 0.0 | 519 |
MS.gene07063.t1 | MTR_7g109600 | 94.845 | 194 | 8 | 2 | 73 | 265 | 7 | 199 | 5.75e-132 | 371 |
MS.gene07063.t1 | MTR_2g032030 | 47.500 | 160 | 74 | 4 | 1 | 155 | 213 | 367 | 2.77e-36 | 134 |
MS.gene07063.t1 | MTR_2g032030 | 47.500 | 160 | 74 | 4 | 1 | 155 | 213 | 367 | 5.11e-36 | 134 |
MS.gene07063.t1 | MTR_8g087000 | 57.273 | 110 | 42 | 3 | 25 | 131 | 45 | 152 | 1.40e-35 | 127 |
MS.gene07063.t1 | MTR_7g079040 | 51.493 | 134 | 50 | 3 | 24 | 151 | 134 | 258 | 5.90e-35 | 128 |
MS.gene07063.t1 | MTR_8g087000 | 56.481 | 108 | 42 | 3 | 27 | 131 | 48 | 153 | 2.69e-34 | 124 |
MS.gene07063.t1 | MTR_8g028565 | 48.462 | 130 | 55 | 2 | 8 | 137 | 122 | 239 | 3.05e-34 | 126 |
MS.gene07063.t1 | MTR_2g016770 | 51.200 | 125 | 55 | 4 | 24 | 146 | 9 | 129 | 3.98e-33 | 120 |
MS.gene07063.t1 | MTR_2g016770 | 50.820 | 122 | 54 | 4 | 27 | 146 | 4 | 121 | 4.93e-32 | 117 |
MS.gene07063.t1 | MTR_2g083870 | 54.472 | 123 | 48 | 5 | 2 | 120 | 31 | 149 | 1.71e-31 | 117 |
MS.gene07063.t1 | MTR_1g099600 | 48.276 | 116 | 49 | 2 | 8 | 120 | 148 | 255 | 2.05e-30 | 115 |
MS.gene07063.t1 | MTR_5g016610 | 54.945 | 91 | 37 | 1 | 20 | 110 | 170 | 256 | 5.88e-28 | 108 |
MS.gene07063.t1 | MTR_8g098945 | 61.333 | 75 | 26 | 1 | 49 | 120 | 125 | 199 | 1.21e-27 | 107 |
MS.gene07063.t1 | MTR_4g094908 | 55.814 | 86 | 34 | 1 | 25 | 110 | 242 | 323 | 1.80e-26 | 105 |
MS.gene07063.t1 | MTR_1g009613 | 51.136 | 88 | 38 | 1 | 23 | 110 | 237 | 319 | 5.72e-26 | 104 |
MS.gene07063.t1 | MTR_4g127040 | 55.056 | 89 | 36 | 2 | 22 | 110 | 218 | 302 | 1.16e-25 | 103 |
MS.gene07063.t1 | MTR_2g024350 | 51.316 | 76 | 37 | 0 | 51 | 126 | 6 | 81 | 4.39e-23 | 94.4 |
MS.gene07063.t1 | MTR_1g070455 | 60.000 | 60 | 24 | 0 | 51 | 110 | 291 | 350 | 3.75e-22 | 94.4 |
MS.gene07063.t1 | MTR_2g024380 | 47.253 | 91 | 41 | 1 | 24 | 114 | 229 | 312 | 1.16e-21 | 94.0 |
MS.gene07063.t1 | MTR_3g108960 | 43.023 | 86 | 40 | 1 | 25 | 110 | 295 | 371 | 4.67e-20 | 89.0 |
MS.gene07063.t1 | MTR_0117s0040 | 55.000 | 60 | 27 | 0 | 51 | 110 | 72 | 131 | 5.46e-20 | 86.7 |
MS.gene07063.t1 | MTR_3g053330 | 39.200 | 125 | 61 | 4 | 3 | 124 | 213 | 325 | 6.31e-20 | 89.0 |
MS.gene07063.t1 | MTR_8g067635 | 42.991 | 107 | 56 | 1 | 7 | 113 | 308 | 409 | 1.72e-19 | 87.8 |
MS.gene07063.t1 | MTR_4g094588 | 60.317 | 63 | 24 | 1 | 54 | 116 | 179 | 240 | 1.98e-19 | 86.7 |
MS.gene07063.t1 | MTR_7g110720 | 50.649 | 77 | 35 | 1 | 51 | 124 | 214 | 290 | 2.30e-19 | 87.0 |
MS.gene07063.t1 | MTR_2g023930 | 46.429 | 84 | 39 | 1 | 30 | 113 | 288 | 365 | 2.85e-19 | 87.4 |
MS.gene07063.t1 | MTR_7g110720 | 50.649 | 77 | 35 | 1 | 51 | 124 | 187 | 263 | 2.88e-19 | 86.7 |
MS.gene07063.t1 | MTR_6g053200 | 48.571 | 70 | 36 | 0 | 46 | 115 | 323 | 392 | 4.35e-19 | 86.7 |
MS.gene07063.t1 | MTR_1g086790 | 52.000 | 75 | 34 | 2 | 54 | 128 | 159 | 231 | 5.30e-19 | 85.1 |
MS.gene07063.t1 | MTR_4g094412 | 55.556 | 63 | 28 | 0 | 53 | 115 | 243 | 305 | 5.97e-19 | 86.3 |
MS.gene07063.t1 | MTR_4g094412 | 55.556 | 63 | 28 | 0 | 53 | 115 | 234 | 296 | 6.00e-19 | 86.3 |
MS.gene07063.t1 | MTR_4g132430 | 55.556 | 63 | 28 | 0 | 53 | 115 | 127 | 189 | 7.89e-19 | 85.1 |
MS.gene07063.t1 | MTR_4g132430 | 55.556 | 63 | 28 | 0 | 53 | 115 | 261 | 323 | 1.23e-18 | 85.5 |
MS.gene07063.t1 | MTR_8g069935 | 40.187 | 107 | 59 | 1 | 7 | 113 | 290 | 391 | 1.28e-18 | 85.1 |
MS.gene07063.t1 | MTR_5g042920 | 54.412 | 68 | 30 | 1 | 54 | 121 | 321 | 387 | 1.30e-18 | 85.1 |
MS.gene07063.t1 | MTR_5g042920 | 47.826 | 69 | 32 | 3 | 54 | 120 | 152 | 218 | 1.21e-11 | 64.7 |
MS.gene07063.t1 | MTR_4g082580 | 46.067 | 89 | 46 | 2 | 51 | 139 | 276 | 362 | 1.69e-18 | 84.3 |
MS.gene07063.t1 | MTR_4g082580 | 38.372 | 86 | 45 | 3 | 42 | 125 | 139 | 218 | 1.21e-11 | 64.3 |
MS.gene07063.t1 | MTR_7g109800 | 40.777 | 103 | 56 | 3 | 54 | 152 | 146 | 247 | 2.53e-18 | 82.8 |
MS.gene07063.t1 | MTR_2g033820 | 50.000 | 74 | 35 | 2 | 54 | 127 | 204 | 275 | 2.71e-18 | 84.0 |
MS.gene07063.t1 | MTR_7g011820 | 40.594 | 101 | 57 | 2 | 54 | 152 | 411 | 510 | 3.35e-18 | 84.3 |
MS.gene07063.t1 | MTR_7g011820 | 51.667 | 60 | 27 | 2 | 54 | 113 | 229 | 286 | 5.32e-12 | 65.9 |
MS.gene07063.t1 | MTR_7g009730 | 55.932 | 59 | 26 | 0 | 53 | 111 | 219 | 277 | 4.00e-18 | 84.0 |
MS.gene07063.t1 | MTR_8g027860 | 46.296 | 108 | 51 | 4 | 3 | 108 | 91 | 193 | 6.11e-18 | 82.4 |
MS.gene07063.t1 | MTR_2g088000 | 38.384 | 99 | 55 | 1 | 17 | 115 | 319 | 411 | 1.12e-17 | 82.8 |
MS.gene07063.t1 | MTR_4g122530 | 33.898 | 118 | 59 | 2 | 54 | 171 | 209 | 307 | 1.27e-17 | 82.0 |
MS.gene07063.t1 | MTR_8g067650 | 44.444 | 90 | 43 | 1 | 24 | 113 | 317 | 399 | 2.75e-17 | 81.6 |
MS.gene07063.t1 | MTR_7g062220 | 57.576 | 66 | 27 | 1 | 45 | 110 | 116 | 180 | 4.92e-17 | 79.7 |
MS.gene07063.t1 | MTR_3g009470 | 53.623 | 69 | 31 | 1 | 54 | 122 | 496 | 563 | 5.48e-17 | 80.9 |
MS.gene07063.t1 | MTR_3g009470 | 53.846 | 65 | 27 | 3 | 50 | 113 | 276 | 338 | 6.98e-14 | 71.6 |
MS.gene07063.t1 | MTR_4g049790 | 47.761 | 67 | 35 | 0 | 49 | 115 | 308 | 374 | 7.19e-17 | 80.5 |
MS.gene07063.t1 | MTR_5g091390 | 55.556 | 63 | 27 | 1 | 54 | 116 | 158 | 219 | 8.62e-17 | 79.0 |
MS.gene07063.t1 | MTR_7g079010 | 56.897 | 58 | 24 | 1 | 54 | 111 | 142 | 198 | 1.18e-16 | 77.0 |
MS.gene07063.t1 | MTR_4g107970 | 54.098 | 61 | 28 | 0 | 53 | 113 | 178 | 238 | 1.73e-16 | 79.3 |
MS.gene07063.t1 | MTR_4g107970 | 54.098 | 61 | 28 | 0 | 53 | 113 | 255 | 315 | 1.76e-16 | 79.3 |
MS.gene07063.t1 | MTR_4g007060 | 46.269 | 67 | 36 | 0 | 54 | 120 | 129 | 195 | 2.02e-16 | 77.4 |
MS.gene07063.t1 | MTR_4g049760 | 49.231 | 65 | 33 | 0 | 49 | 113 | 286 | 350 | 2.19e-16 | 79.0 |
MS.gene07063.t1 | MTR_5g094430 | 53.030 | 66 | 30 | 1 | 54 | 119 | 253 | 317 | 2.23e-16 | 78.6 |
MS.gene07063.t1 | MTR_5g094430 | 50.820 | 61 | 28 | 2 | 53 | 113 | 88 | 146 | 1.56e-12 | 67.4 |
MS.gene07063.t1 | MTR_3g056100 | 38.136 | 118 | 62 | 4 | 9 | 119 | 223 | 336 | 2.34e-16 | 78.6 |
MS.gene07063.t1 | MTR_3g056100 | 50.000 | 60 | 28 | 2 | 54 | 113 | 100 | 157 | 1.32e-11 | 64.7 |
MS.gene07063.t1 | MTR_5g094430 | 53.030 | 66 | 30 | 1 | 54 | 119 | 231 | 295 | 2.45e-16 | 78.2 |
MS.gene07063.t1 | MTR_5g094430 | 50.820 | 61 | 28 | 2 | 53 | 113 | 66 | 124 | 1.87e-12 | 67.0 |
MS.gene07063.t1 | MTR_1g015140 | 54.237 | 59 | 26 | 1 | 54 | 112 | 103 | 160 | 2.53e-16 | 74.7 |
MS.gene07063.t1 | MTR_4g007060 | 46.269 | 67 | 36 | 0 | 54 | 120 | 163 | 229 | 2.54e-16 | 77.4 |
MS.gene07063.t1 | MTR_3g056100 | 38.136 | 118 | 62 | 4 | 9 | 119 | 210 | 323 | 2.65e-16 | 78.6 |
MS.gene07063.t1 | MTR_3g056100 | 50.000 | 60 | 28 | 2 | 54 | 113 | 100 | 157 | 1.29e-11 | 64.7 |
MS.gene07063.t1 | MTR_3g056100 | 39.130 | 115 | 65 | 3 | 9 | 119 | 367 | 480 | 3.20e-16 | 78.6 |
MS.gene07063.t1 | MTR_3g056100 | 50.000 | 60 | 28 | 2 | 54 | 113 | 244 | 301 | 1.37e-11 | 64.7 |
MS.gene07063.t1 | MTR_5g094430 | 53.030 | 66 | 30 | 1 | 54 | 119 | 365 | 429 | 3.43e-16 | 78.2 |
MS.gene07063.t1 | MTR_5g094430 | 50.820 | 61 | 28 | 2 | 53 | 113 | 200 | 258 | 2.19e-12 | 67.0 |
MS.gene07063.t1 | MTR_3g056100 | 39.130 | 115 | 65 | 3 | 9 | 119 | 354 | 467 | 3.48e-16 | 78.2 |
MS.gene07063.t1 | MTR_3g056100 | 50.000 | 60 | 28 | 2 | 54 | 113 | 244 | 301 | 1.35e-11 | 64.7 |
MS.gene07063.t1 | MTR_7g117200 | 32.121 | 165 | 97 | 4 | 3 | 165 | 71 | 222 | 3.87e-16 | 77.0 |
MS.gene07063.t1 | MTR_5g097490 | 39.130 | 115 | 57 | 3 | 13 | 115 | 200 | 313 | 4.15e-16 | 77.4 |
MS.gene07063.t1 | MTR_2g045360 | 53.226 | 62 | 29 | 0 | 54 | 115 | 212 | 273 | 5.42e-16 | 77.4 |
MS.gene07063.t1 | MTR_3g104750 | 56.897 | 58 | 24 | 1 | 54 | 111 | 105 | 161 | 5.77e-16 | 73.9 |
MS.gene07063.t1 | MTR_7g071120 | 48.571 | 70 | 35 | 1 | 54 | 123 | 325 | 393 | 7.11e-16 | 77.4 |
MS.gene07063.t1 | MTR_7g071120 | 55.000 | 60 | 25 | 2 | 54 | 113 | 167 | 224 | 1.58e-13 | 70.5 |
MS.gene07063.t1 | MTR_7g028415 | 50.000 | 58 | 28 | 1 | 54 | 111 | 94 | 150 | 1.15e-15 | 73.2 |
MS.gene07063.t1 | MTR_7g028710 | 50.000 | 58 | 28 | 1 | 54 | 111 | 94 | 150 | 1.15e-15 | 73.2 |
MS.gene07063.t1 | MTR_2g105060 | 47.541 | 61 | 32 | 0 | 54 | 114 | 95 | 155 | 1.26e-15 | 74.7 |
MS.gene07063.t1 | MTR_2g105060 | 47.541 | 61 | 32 | 0 | 54 | 114 | 170 | 230 | 1.52e-15 | 75.5 |
MS.gene07063.t1 | MTR_5g043880 | 42.574 | 101 | 55 | 3 | 10 | 110 | 83 | 180 | 1.99e-15 | 74.7 |
MS.gene07063.t1 | MTR_4g130900 | 45.070 | 71 | 38 | 1 | 43 | 113 | 349 | 418 | 3.26e-15 | 75.5 |
MS.gene07063.t1 | MTR_7g100510 | 47.887 | 71 | 33 | 2 | 53 | 123 | 361 | 427 | 3.68e-15 | 75.1 |
MS.gene07063.t1 | MTR_7g100510 | 53.333 | 60 | 26 | 2 | 54 | 113 | 190 | 247 | 4.71e-13 | 68.9 |
MS.gene07063.t1 | MTR_4g047580 | 43.023 | 86 | 43 | 1 | 30 | 115 | 264 | 343 | 4.29e-15 | 75.1 |
MS.gene07063.t1 | MTR_3g106060 | 45.570 | 79 | 36 | 2 | 39 | 110 | 117 | 195 | 4.39e-15 | 73.9 |
MS.gene07063.t1 | MTR_8g099350 | 35.526 | 152 | 84 | 4 | 24 | 172 | 106 | 246 | 5.75e-15 | 73.9 |
MS.gene07063.t1 | MTR_1g077780 | 47.059 | 68 | 35 | 1 | 54 | 121 | 63 | 129 | 6.09e-15 | 70.5 |
MS.gene07063.t1 | MTR_8g087000 | 57.895 | 57 | 22 | 1 | 73 | 129 | 35 | 89 | 6.63e-15 | 71.2 |
MS.gene07063.t1 | MTR_7g080020 | 46.053 | 76 | 35 | 2 | 54 | 124 | 494 | 568 | 6.78e-15 | 74.7 |
MS.gene07063.t1 | MTR_7g080020 | 53.333 | 60 | 26 | 2 | 54 | 113 | 281 | 338 | 6.53e-13 | 68.6 |
MS.gene07063.t1 | MTR_7g080000 | 40.659 | 91 | 48 | 2 | 54 | 139 | 433 | 522 | 7.29e-15 | 74.3 |
MS.gene07063.t1 | MTR_7g080000 | 48.387 | 62 | 30 | 2 | 54 | 115 | 235 | 294 | 9.20e-13 | 68.2 |
MS.gene07063.t1 | MTR_4g013260 | 48.387 | 62 | 31 | 1 | 54 | 115 | 337 | 397 | 9.02e-15 | 73.9 |
MS.gene07063.t1 | MTR_4g013260 | 53.333 | 60 | 27 | 1 | 54 | 113 | 185 | 243 | 1.09e-13 | 70.9 |
MS.gene07063.t1 | MTR_3g090860 | 53.226 | 62 | 27 | 1 | 49 | 108 | 129 | 190 | 1.25e-14 | 72.8 |
MS.gene07063.t1 | MTR_5g074400 | 49.254 | 67 | 33 | 1 | 54 | 120 | 421 | 486 | 1.98e-14 | 73.2 |
MS.gene07063.t1 | MTR_5g074400 | 53.333 | 60 | 26 | 2 | 54 | 113 | 244 | 301 | 1.25e-12 | 67.8 |
MS.gene07063.t1 | MTR_3g095040 | 50.000 | 60 | 29 | 1 | 54 | 113 | 119 | 177 | 2.33e-14 | 70.5 |
MS.gene07063.t1 | MTR_8g092010 | 47.619 | 63 | 32 | 1 | 51 | 113 | 106 | 167 | 2.42e-14 | 69.7 |
MS.gene07063.t1 | MTR_6g086555 | 46.250 | 80 | 35 | 3 | 35 | 113 | 194 | 266 | 3.23e-14 | 72.0 |
MS.gene07063.t1 | MTR_3g031220 | 47.761 | 67 | 34 | 1 | 54 | 120 | 366 | 431 | 5.38e-14 | 71.6 |
MS.gene07063.t1 | MTR_3g031220 | 51.613 | 62 | 28 | 2 | 54 | 115 | 199 | 258 | 2.83e-13 | 69.7 |
MS.gene07063.t1 | MTR_3g009470 | 53.846 | 65 | 27 | 3 | 50 | 113 | 276 | 338 | 6.66e-14 | 71.6 |
MS.gene07063.t1 | MTR_1g013760 | 47.368 | 57 | 30 | 0 | 54 | 110 | 141 | 197 | 1.31e-13 | 69.7 |
MS.gene07063.t1 | MTR_1g013790 | 46.667 | 60 | 32 | 0 | 54 | 113 | 102 | 161 | 1.84e-13 | 68.6 |
MS.gene07063.t1 | MTR_3g031220 | 51.613 | 62 | 28 | 2 | 54 | 115 | 199 | 258 | 2.42e-13 | 69.3 |
MS.gene07063.t1 | MTR_8g007270 | 54.386 | 57 | 25 | 1 | 54 | 110 | 155 | 210 | 2.75e-13 | 67.8 |
MS.gene07063.t1 | MTR_1g078260 | 50.000 | 64 | 30 | 2 | 48 | 110 | 242 | 304 | 8.04e-13 | 68.2 |
MS.gene07063.t1 | MTR_8g096730 | 44.828 | 58 | 31 | 1 | 54 | 111 | 71 | 127 | 1.08e-12 | 64.3 |
MS.gene07063.t1 | MTR_3g095080 | 45.588 | 68 | 36 | 1 | 54 | 121 | 145 | 211 | 7.22e-12 | 63.5 |
MS.gene07063.t1 | MTR_3g095080 | 45.588 | 68 | 36 | 1 | 54 | 121 | 169 | 235 | 1.07e-11 | 63.5 |
MS.gene07063.t1 | MTR_8g092140 | 45.588 | 68 | 36 | 1 | 54 | 121 | 161 | 227 | 1.23e-11 | 63.2 |
MS.gene07063.t1 | MTR_5g067680 | 47.458 | 59 | 29 | 1 | 52 | 108 | 201 | 259 | 8.31e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07063.t1 | AT2G34830 | 54.783 | 115 | 51 | 1 | 1 | 114 | 162 | 276 | 1.10e-35 | 132 |
MS.gene07063.t1 | AT2G34830 | 54.783 | 115 | 51 | 1 | 1 | 114 | 171 | 285 | 1.21e-35 | 132 |
MS.gene07063.t1 | AT4G01250 | 50.000 | 130 | 48 | 2 | 24 | 145 | 108 | 228 | 4.09e-35 | 128 |
MS.gene07063.t1 | AT1G29280 | 60.396 | 101 | 34 | 3 | 25 | 122 | 44 | 141 | 8.58e-34 | 123 |
MS.gene07063.t1 | AT3G58710 | 54.198 | 131 | 43 | 4 | 10 | 126 | 14 | 141 | 1.11e-33 | 123 |
MS.gene07063.t1 | AT1G30650 | 60.417 | 96 | 37 | 1 | 19 | 113 | 182 | 277 | 2.08e-33 | 126 |
MS.gene07063.t1 | AT3G58710 | 60.000 | 105 | 36 | 3 | 25 | 126 | 41 | 142 | 6.70e-33 | 121 |
MS.gene07063.t1 | AT5G52830 | 50.400 | 125 | 51 | 2 | 24 | 145 | 144 | 260 | 2.76e-31 | 119 |
MS.gene07063.t1 | AT4G23550 | 52.336 | 107 | 48 | 1 | 43 | 146 | 130 | 236 | 6.03e-28 | 109 |
MS.gene07063.t1 | AT2G23320 | 53.333 | 90 | 36 | 2 | 22 | 110 | 213 | 297 | 3.22e-27 | 107 |
MS.gene07063.t1 | AT5G45050 | 56.044 | 91 | 32 | 1 | 24 | 114 | 1131 | 1213 | 1.97e-26 | 108 |
MS.gene07063.t1 | AT5G45050 | 56.044 | 91 | 32 | 1 | 24 | 114 | 1159 | 1241 | 1.99e-26 | 108 |
MS.gene07063.t1 | AT5G45050 | 56.044 | 91 | 32 | 1 | 24 | 114 | 1020 | 1102 | 2.41e-26 | 108 |
MS.gene07063.t1 | AT4G24240 | 56.180 | 89 | 35 | 2 | 22 | 110 | 254 | 338 | 2.61e-26 | 105 |
MS.gene07063.t1 | AT2G30590 | 52.222 | 90 | 39 | 2 | 22 | 111 | 286 | 371 | 1.11e-25 | 104 |
MS.gene07063.t1 | AT4G31550 | 54.651 | 86 | 35 | 2 | 25 | 110 | 221 | 302 | 1.42e-24 | 100 |
MS.gene07063.t1 | AT5G28650 | 51.613 | 93 | 41 | 1 | 18 | 110 | 231 | 319 | 1.58e-24 | 100 |
MS.gene07063.t1 | AT2G24570 | 56.000 | 75 | 31 | 1 | 36 | 110 | 228 | 300 | 2.64e-24 | 99.8 |
MS.gene07063.t1 | AT4G31550 | 56.000 | 75 | 31 | 1 | 36 | 110 | 231 | 303 | 3.07e-24 | 99.8 |
MS.gene07063.t1 | AT3G04670 | 50.538 | 93 | 42 | 1 | 18 | 110 | 231 | 319 | 3.81e-24 | 99.4 |
MS.gene07063.t1 | AT5G45260 | 60.274 | 73 | 24 | 2 | 53 | 120 | 1208 | 1280 | 1.57e-22 | 97.4 |
MS.gene07063.t1 | AT4G04450 | 39.655 | 116 | 64 | 3 | 28 | 137 | 170 | 285 | 4.12e-20 | 89.4 |
MS.gene07063.t1 | AT4G04450 | 39.655 | 116 | 64 | 3 | 28 | 137 | 264 | 379 | 5.12e-20 | 89.4 |
MS.gene07063.t1 | AT1G29860 | 55.882 | 68 | 29 | 1 | 54 | 121 | 137 | 203 | 5.14e-20 | 87.4 |
MS.gene07063.t1 | AT5G46350 | 54.321 | 81 | 32 | 2 | 54 | 130 | 184 | 263 | 5.18e-20 | 88.2 |
MS.gene07063.t1 | AT4G18170 | 48.485 | 99 | 48 | 2 | 20 | 116 | 137 | 234 | 7.93e-20 | 87.4 |
MS.gene07063.t1 | AT1G68150 | 48.000 | 75 | 39 | 0 | 53 | 127 | 235 | 309 | 1.48e-19 | 87.4 |
MS.gene07063.t1 | AT4G22070 | 46.429 | 84 | 39 | 1 | 30 | 113 | 280 | 357 | 1.63e-19 | 88.2 |
MS.gene07063.t1 | AT4G22070 | 46.429 | 84 | 39 | 1 | 30 | 113 | 280 | 357 | 1.63e-19 | 88.2 |
MS.gene07063.t1 | AT4G22070 | 46.429 | 84 | 39 | 1 | 30 | 113 | 280 | 357 | 1.63e-19 | 88.2 |
MS.gene07063.t1 | AT4G22070 | 46.429 | 84 | 39 | 1 | 30 | 113 | 280 | 357 | 1.63e-19 | 88.2 |
MS.gene07063.t1 | AT2G04880 | 54.930 | 71 | 31 | 1 | 53 | 123 | 283 | 352 | 2.40e-19 | 87.4 |
MS.gene07063.t1 | AT2G04880 | 48.387 | 62 | 30 | 2 | 54 | 115 | 112 | 171 | 3.60e-12 | 66.2 |
MS.gene07063.t1 | AT2G04880 | 53.425 | 73 | 33 | 1 | 51 | 123 | 305 | 376 | 2.73e-19 | 87.4 |
MS.gene07063.t1 | AT2G04880 | 48.387 | 62 | 30 | 2 | 54 | 115 | 112 | 171 | 3.67e-12 | 66.2 |
MS.gene07063.t1 | AT1G62300 | 57.377 | 61 | 26 | 0 | 53 | 113 | 312 | 372 | 4.13e-19 | 87.0 |
MS.gene07063.t1 | AT5G49520 | 60.000 | 60 | 23 | 1 | 54 | 113 | 222 | 280 | 6.24e-19 | 85.9 |
MS.gene07063.t1 | AT1G18860 | 48.276 | 87 | 39 | 2 | 27 | 113 | 219 | 299 | 6.71e-19 | 86.3 |
MS.gene07063.t1 | AT4G26640 | 34.228 | 149 | 76 | 3 | 12 | 151 | 176 | 311 | 1.72e-18 | 84.3 |
MS.gene07063.t1 | AT4G26640 | 44.595 | 74 | 39 | 2 | 51 | 124 | 33 | 104 | 5.03e-13 | 68.6 |
MS.gene07063.t1 | AT4G26640 | 34.228 | 149 | 76 | 3 | 12 | 151 | 176 | 311 | 1.72e-18 | 84.3 |
MS.gene07063.t1 | AT4G26640 | 44.595 | 74 | 39 | 2 | 51 | 124 | 33 | 104 | 5.03e-13 | 68.6 |
MS.gene07063.t1 | AT4G26640 | 34.228 | 149 | 76 | 3 | 12 | 151 | 176 | 311 | 1.72e-18 | 84.3 |
MS.gene07063.t1 | AT4G26640 | 44.595 | 74 | 39 | 2 | 51 | 124 | 33 | 104 | 5.03e-13 | 68.6 |
MS.gene07063.t1 | AT4G26640 | 34.228 | 149 | 76 | 3 | 12 | 151 | 176 | 311 | 1.72e-18 | 84.3 |
MS.gene07063.t1 | AT4G26640 | 44.595 | 74 | 39 | 2 | 51 | 124 | 33 | 104 | 5.03e-13 | 68.6 |
MS.gene07063.t1 | AT4G26640 | 34.228 | 149 | 76 | 3 | 12 | 151 | 280 | 415 | 2.74e-18 | 84.3 |
MS.gene07063.t1 | AT4G26640 | 44.595 | 74 | 39 | 2 | 51 | 124 | 137 | 208 | 7.33e-13 | 68.6 |
MS.gene07063.t1 | AT4G26640 | 34.228 | 149 | 76 | 3 | 12 | 151 | 312 | 447 | 3.00e-18 | 84.3 |
MS.gene07063.t1 | AT4G26640 | 44.595 | 74 | 39 | 2 | 51 | 124 | 169 | 240 | 9.32e-13 | 68.2 |
MS.gene07063.t1 | AT4G26640 | 34.228 | 149 | 76 | 3 | 12 | 151 | 352 | 487 | 3.28e-18 | 84.3 |
MS.gene07063.t1 | AT4G26640 | 44.595 | 74 | 39 | 2 | 51 | 124 | 209 | 280 | 9.31e-13 | 68.2 |
MS.gene07063.t1 | AT2G25000 | 50.000 | 70 | 35 | 0 | 54 | 123 | 104 | 173 | 7.81e-18 | 80.5 |
MS.gene07063.t1 | AT2G25000 | 50.000 | 70 | 35 | 0 | 54 | 123 | 104 | 173 | 7.81e-18 | 80.5 |
MS.gene07063.t1 | AT4G01720 | 45.122 | 82 | 39 | 1 | 32 | 113 | 224 | 299 | 1.13e-17 | 82.4 |
MS.gene07063.t1 | AT2G25000 | 50.000 | 70 | 35 | 0 | 54 | 123 | 126 | 195 | 1.37e-17 | 80.1 |
MS.gene07063.t1 | AT5G15130 | 49.333 | 75 | 35 | 1 | 53 | 124 | 227 | 301 | 1.40e-17 | 82.4 |
MS.gene07063.t1 | AT2G25000 | 50.000 | 70 | 35 | 0 | 54 | 123 | 147 | 216 | 1.62e-17 | 80.5 |
MS.gene07063.t1 | AT5G15130 | 49.333 | 75 | 35 | 1 | 53 | 124 | 185 | 259 | 2.01e-17 | 82.0 |
MS.gene07063.t1 | AT2G21900 | 33.019 | 106 | 68 | 2 | 11 | 116 | 69 | 171 | 2.01e-17 | 78.6 |
MS.gene07063.t1 | AT4G31800 | 53.226 | 62 | 29 | 0 | 54 | 115 | 112 | 173 | 2.03e-17 | 79.7 |
MS.gene07063.t1 | AT4G31800 | 53.226 | 62 | 29 | 0 | 54 | 115 | 177 | 238 | 2.33e-17 | 80.5 |
MS.gene07063.t1 | AT1G13960 | 54.386 | 57 | 25 | 1 | 54 | 110 | 257 | 312 | 2.67e-17 | 80.9 |
MS.gene07063.t1 | AT1G13960 | 53.333 | 60 | 26 | 2 | 54 | 113 | 77 | 134 | 3.94e-13 | 68.9 |
MS.gene07063.t1 | AT2G03340 | 51.515 | 66 | 31 | 1 | 54 | 119 | 416 | 480 | 2.75e-17 | 81.6 |
MS.gene07063.t1 | AT2G03340 | 45.333 | 75 | 38 | 3 | 37 | 110 | 233 | 305 | 1.38e-12 | 67.8 |
MS.gene07063.t1 | AT3G62340 | 55.556 | 63 | 27 | 1 | 54 | 116 | 119 | 180 | 2.75e-17 | 79.7 |
MS.gene07063.t1 | AT1G13960 | 54.386 | 57 | 25 | 1 | 54 | 110 | 410 | 465 | 4.67e-17 | 80.9 |
MS.gene07063.t1 | AT1G13960 | 53.333 | 60 | 26 | 2 | 54 | 113 | 230 | 287 | 5.22e-13 | 68.9 |
MS.gene07063.t1 | AT1G80840 | 42.000 | 100 | 47 | 3 | 27 | 119 | 117 | 212 | 8.64e-17 | 79.0 |
MS.gene07063.t1 | AT2G30250 | 54.545 | 66 | 29 | 1 | 54 | 119 | 329 | 393 | 1.44e-16 | 79.0 |
MS.gene07063.t1 | AT1G55600 | 48.438 | 64 | 32 | 1 | 52 | 115 | 306 | 368 | 1.64e-16 | 79.3 |
MS.gene07063.t1 | AT4G23810 | 48.276 | 87 | 40 | 2 | 24 | 108 | 132 | 215 | 1.83e-16 | 78.2 |
MS.gene07063.t1 | AT1G69310 | 44.565 | 92 | 47 | 4 | 19 | 110 | 116 | 203 | 2.84e-16 | 77.0 |
MS.gene07063.t1 | AT1G69310 | 44.565 | 92 | 47 | 4 | 19 | 110 | 116 | 203 | 2.84e-16 | 77.0 |
MS.gene07063.t1 | AT1G69310 | 44.565 | 92 | 47 | 4 | 19 | 110 | 116 | 203 | 2.84e-16 | 77.0 |
MS.gene07063.t1 | AT2G38470 | 51.389 | 72 | 33 | 2 | 54 | 124 | 363 | 433 | 4.37e-16 | 78.2 |
MS.gene07063.t1 | AT2G38470 | 51.667 | 60 | 27 | 2 | 54 | 113 | 185 | 242 | 3.80e-12 | 66.2 |
MS.gene07063.t1 | AT3G01080 | 53.968 | 63 | 28 | 1 | 51 | 113 | 304 | 365 | 4.65e-16 | 77.8 |
MS.gene07063.t1 | AT3G01080 | 53.333 | 60 | 26 | 2 | 54 | 113 | 168 | 225 | 7.24e-13 | 68.2 |
MS.gene07063.t1 | AT3G01080 | 55.000 | 60 | 26 | 1 | 54 | 113 | 345 | 403 | 5.49e-16 | 77.4 |
MS.gene07063.t1 | AT3G01080 | 53.333 | 60 | 26 | 2 | 54 | 113 | 206 | 263 | 8.09e-13 | 68.2 |
MS.gene07063.t1 | AT4G30935 | 48.438 | 64 | 32 | 1 | 50 | 113 | 328 | 390 | 6.76e-16 | 77.4 |
MS.gene07063.t1 | AT2G46400 | 36.806 | 144 | 77 | 4 | 14 | 145 | 65 | 206 | 8.24e-16 | 75.9 |
MS.gene07063.t1 | AT5G13080 | 50.000 | 58 | 28 | 1 | 54 | 111 | 68 | 124 | 1.06e-15 | 72.8 |
MS.gene07063.t1 | AT4G11070 | 41.509 | 106 | 57 | 2 | 5 | 108 | 64 | 166 | 1.26e-15 | 75.1 |
MS.gene07063.t1 | AT4G11070 | 41.509 | 106 | 57 | 2 | 5 | 108 | 96 | 198 | 1.51e-15 | 75.5 |
MS.gene07063.t1 | AT5G56270 | 53.226 | 62 | 28 | 1 | 54 | 115 | 488 | 548 | 1.52e-15 | 76.6 |
MS.gene07063.t1 | AT5G56270 | 50.769 | 65 | 29 | 3 | 50 | 113 | 269 | 331 | 5.47e-12 | 65.9 |
MS.gene07063.t1 | AT5G26170 | 54.386 | 57 | 25 | 1 | 54 | 110 | 114 | 169 | 1.95e-15 | 72.8 |
MS.gene07063.t1 | AT2G46130 | 48.611 | 72 | 36 | 1 | 54 | 125 | 31 | 101 | 2.54e-15 | 70.5 |
MS.gene07063.t1 | AT2G47260 | 53.333 | 60 | 27 | 1 | 54 | 113 | 175 | 233 | 2.65e-15 | 75.1 |
MS.gene07063.t1 | AT5G43290 | 36.296 | 135 | 80 | 5 | 29 | 159 | 89 | 221 | 4.60e-15 | 73.6 |
MS.gene07063.t1 | AT1G64000 | 50.000 | 58 | 28 | 1 | 54 | 111 | 115 | 171 | 1.12e-14 | 71.2 |
MS.gene07063.t1 | AT5G41570 | 50.000 | 58 | 28 | 1 | 54 | 111 | 99 | 155 | 1.23e-14 | 70.5 |
MS.gene07063.t1 | AT4G26440 | 50.000 | 66 | 32 | 1 | 54 | 119 | 373 | 437 | 1.28e-14 | 73.6 |
MS.gene07063.t1 | AT4G26440 | 53.333 | 60 | 26 | 2 | 54 | 113 | 179 | 236 | 3.45e-12 | 66.6 |
MS.gene07063.t1 | AT5G24110 | 42.222 | 90 | 43 | 3 | 23 | 108 | 86 | 170 | 3.58e-14 | 71.2 |
MS.gene07063.t1 | AT3G01970 | 47.368 | 57 | 29 | 1 | 54 | 110 | 66 | 121 | 4.31e-14 | 68.2 |
MS.gene07063.t1 | AT2G37260 | 54.386 | 57 | 25 | 1 | 54 | 110 | 350 | 405 | 5.90e-14 | 71.6 |
MS.gene07063.t1 | AT2G37260 | 45.122 | 82 | 38 | 3 | 54 | 130 | 166 | 245 | 2.30e-11 | 63.9 |
MS.gene07063.t1 | AT2G37260 | 54.386 | 57 | 25 | 1 | 54 | 110 | 270 | 325 | 6.54e-14 | 70.9 |
MS.gene07063.t1 | AT2G37260 | 45.122 | 82 | 38 | 3 | 54 | 130 | 86 | 165 | 2.71e-11 | 63.5 |
MS.gene07063.t1 | AT2G37260 | 54.386 | 57 | 25 | 1 | 54 | 110 | 268 | 323 | 6.66e-14 | 70.9 |
MS.gene07063.t1 | AT2G37260 | 45.122 | 82 | 38 | 3 | 54 | 130 | 84 | 163 | 2.87e-11 | 63.2 |
MS.gene07063.t1 | AT2G44745 | 49.315 | 73 | 28 | 2 | 54 | 118 | 146 | 217 | 6.79e-14 | 69.3 |
MS.gene07063.t1 | AT5G64810 | 50.877 | 57 | 27 | 1 | 54 | 110 | 111 | 166 | 9.41e-14 | 68.6 |
MS.gene07063.t1 | AT5G07100 | 50.820 | 61 | 29 | 1 | 54 | 114 | 142 | 201 | 1.39e-13 | 68.6 |
MS.gene07063.t1 | AT5G07100 | 36.538 | 104 | 61 | 2 | 54 | 157 | 25 | 123 | 3.24e-13 | 67.4 |
MS.gene07063.t1 | AT5G07100 | 50.820 | 61 | 29 | 1 | 54 | 114 | 142 | 201 | 1.39e-13 | 68.6 |
MS.gene07063.t1 | AT5G07100 | 36.538 | 104 | 61 | 2 | 54 | 157 | 25 | 123 | 3.24e-13 | 67.4 |
MS.gene07063.t1 | AT5G07100 | 50.820 | 61 | 29 | 1 | 54 | 114 | 142 | 201 | 1.39e-13 | 68.6 |
MS.gene07063.t1 | AT5G07100 | 36.538 | 104 | 61 | 2 | 54 | 157 | 25 | 123 | 3.24e-13 | 67.4 |
MS.gene07063.t1 | AT5G07100 | 50.820 | 61 | 29 | 1 | 54 | 114 | 142 | 201 | 1.39e-13 | 68.6 |
MS.gene07063.t1 | AT5G07100 | 36.538 | 104 | 61 | 2 | 54 | 157 | 25 | 123 | 3.24e-13 | 67.4 |
MS.gene07063.t1 | AT5G07100 | 50.820 | 61 | 29 | 1 | 54 | 114 | 235 | 294 | 3.30e-13 | 68.6 |
MS.gene07063.t1 | AT5G07100 | 36.538 | 104 | 61 | 2 | 54 | 157 | 118 | 216 | 8.30e-13 | 67.4 |
MS.gene07063.t1 | AT1G69810 | 45.455 | 66 | 35 | 1 | 53 | 117 | 203 | 268 | 7.54e-13 | 68.2 |
MS.gene07063.t1 | AT3G01080 | 53.333 | 60 | 26 | 2 | 54 | 113 | 206 | 263 | 1.01e-12 | 67.4 |
MS.gene07063.t1 | AT1G69810 | 45.455 | 66 | 35 | 1 | 53 | 117 | 145 | 210 | 1.46e-12 | 67.0 |
MS.gene07063.t1 | AT2G40740 | 45.455 | 77 | 37 | 2 | 52 | 123 | 172 | 248 | 2.07e-12 | 66.2 |
MS.gene07063.t1 | AT2G40740 | 43.373 | 83 | 45 | 1 | 52 | 132 | 181 | 263 | 2.19e-12 | 66.2 |
MS.gene07063.t1 | AT4G39410 | 46.479 | 71 | 32 | 2 | 54 | 119 | 224 | 293 | 3.96e-12 | 65.5 |
MS.gene07063.t1 | AT4G12020 | 42.222 | 90 | 37 | 4 | 42 | 123 | 462 | 544 | 1.20e-11 | 65.1 |
MS.gene07063.t1 | AT4G12020 | 42.222 | 90 | 37 | 4 | 42 | 123 | 462 | 544 | 1.20e-11 | 65.1 |
MS.gene07063.t1 | AT4G12020 | 42.222 | 90 | 37 | 4 | 42 | 123 | 462 | 544 | 1.43e-11 | 65.1 |
MS.gene07063.t1 | AT4G12020 | 42.222 | 90 | 37 | 4 | 42 | 123 | 462 | 544 | 1.45e-11 | 65.1 |
MS.gene07063.t1 | AT4G12020 | 42.222 | 90 | 37 | 4 | 42 | 123 | 462 | 544 | 1.49e-11 | 65.1 |
MS.gene07063.t1 | AT4G12020 | 42.222 | 90 | 37 | 4 | 42 | 123 | 462 | 544 | 1.53e-11 | 64.7 |
MS.gene07063.t1 | AT4G12020 | 42.222 | 90 | 37 | 4 | 42 | 123 | 462 | 544 | 1.53e-11 | 64.7 |
MS.gene07063.t1 | AT1G69310 | 41.304 | 92 | 46 | 5 | 19 | 110 | 116 | 199 | 1.62e-11 | 63.5 |
MS.gene07063.t1 | AT4G12020 | 42.222 | 90 | 37 | 4 | 42 | 123 | 395 | 477 | 1.63e-11 | 64.7 |
MS.gene07063.t1 | AT4G12020 | 42.222 | 90 | 37 | 4 | 42 | 123 | 462 | 544 | 1.68e-11 | 64.7 |
MS.gene07063.t1 | AT4G12020 | 42.222 | 90 | 37 | 4 | 42 | 123 | 462 | 544 | 1.70e-11 | 64.7 |
MS.gene07063.t1 | AT4G12020 | 42.222 | 90 | 37 | 4 | 42 | 123 | 462 | 544 | 1.79e-11 | 64.7 |
MS.gene07063.t1 | AT3G56400 | 30.137 | 146 | 95 | 3 | 54 | 192 | 121 | 266 | 2.80e-11 | 62.8 |
MS.gene07063.t1 | AT2G40750 | 31.624 | 117 | 70 | 4 | 54 | 166 | 153 | 263 | 7.36e-11 | 62.0 |
MS.gene07063.t1 | AT2G46130 | 43.056 | 72 | 36 | 1 | 54 | 125 | 31 | 97 | 8.85e-11 | 58.2 |
Find 48 sgRNAs with CRISPR-Local
Find 99 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTCTATCTGTTTCTGTTCT+TGG | 0.057409 | 7.2:-5795724 | None:intergenic |
ATCTTTGGTTGTTTCGGTTT+CGG | 0.251832 | 7.2:-5795675 | None:intergenic |
CAAAATAGATCTTCTCTTAG+AGG | 0.264483 | 7.2:+5795901 | MS.gene07063:CDS |
TTCTTAGATACTTGAGATTC+TGG | 0.282785 | 7.2:-5794378 | None:intergenic |
AGATGTTTCTGACTCAAGTT+TGG | 0.285896 | 7.2:-5794343 | None:intergenic |
TTACTTTGAAAGGATCTTCT+TGG | 0.303191 | 7.2:-5795856 | None:intergenic |
GAGGAGAGGGCTGTGGGATC+TGG | 0.309355 | 7.2:-5795617 | None:intergenic |
AGATCCTTTCAAAGTAAATA+TGG | 0.318455 | 7.2:+5795862 | MS.gene07063:CDS |
TGGGAGATCTTTGGTTGTTT+CGG | 0.331416 | 7.2:-5795681 | None:intergenic |
AGAAGTAACTGGGAGATCTT+TGG | 0.334573 | 7.2:-5795690 | None:intergenic |
AAGAATGCACACCTTGGATA+TGG | 0.343407 | 7.2:-5794665 | None:intergenic |
GTTTCGGTTTCGGATTCTTT+TGG | 0.357685 | 7.2:-5795665 | None:intergenic |
GGTGGAGGAGGAGAGGGCTG+TGG | 0.362115 | 7.2:-5795624 | None:intergenic |
AGATCTCCCAGTTACTTCTA+AGG | 0.363955 | 7.2:+5795694 | MS.gene07063:CDS |
GATGTTTCTGACTCAAGTTT+GGG | 0.377930 | 7.2:-5794342 | None:intergenic |
AGCTAAATTTGTGGTGGAGG+AGG | 0.406354 | 7.2:-5795636 | None:intergenic |
GGATATGGAGAGCCTTTGAT+TGG | 0.415352 | 7.2:-5794650 | None:intergenic |
ATCAATCAAGAAGGGGCAAC+AGG | 0.418051 | 7.2:-5796067 | None:intergenic |
TTGTGCATGTCTCAGGAAAA+TGG | 0.421017 | 7.2:+5794523 | MS.gene07063:intron |
CAGGAAAATGGTTGAGAAAA+CGG | 0.425854 | 7.2:+5794535 | MS.gene07063:intron |
AAATCTACAGGGGATATTAT+AGG | 0.447185 | 7.2:+5795495 | MS.gene07063:intron |
GTGGAGGAGGAGAGGGCTGT+GGG | 0.474492 | 7.2:-5795623 | None:intergenic |
AACACTTGAATCAATCAAGA+AGG | 0.485790 | 7.2:-5796076 | None:intergenic |
AATCTCAAGTATCTAAGAAA+CGG | 0.515113 | 7.2:+5794382 | MS.gene07063:CDS |
TTGAGCTAAATTTGTGGTGG+AGG | 0.521910 | 7.2:-5795639 | None:intergenic |
GTTAGCAAGGTGAAGAATGA+AGG | 0.526261 | 7.2:+5794584 | MS.gene07063:CDS |
TGGTCGTTGAGCTAAATTTG+TGG | 0.534592 | 7.2:-5795645 | None:intergenic |
ACGGTTGTGACTGTGAGGAT+TGG | 0.535468 | 7.2:+5794554 | MS.gene07063:CDS |
TTATAGGTGCAGCACATGCA+AGG | 0.538816 | 7.2:+5795511 | MS.gene07063:CDS |
ATTTGTGGTGGAGGAGGAGA+GGG | 0.545438 | 7.2:-5795630 | None:intergenic |
ACACTTGAATCAATCAAGAA+GGG | 0.556191 | 7.2:-5796075 | None:intergenic |
GATTGGAGAGAATGTTAGCA+AGG | 0.558707 | 7.2:+5794571 | MS.gene07063:CDS |
TTTCTTCCTTAGAAGTAACT+GGG | 0.572607 | 7.2:-5795700 | None:intergenic |
AGAACAGAAACAGATAGAAG+AGG | 0.574832 | 7.2:+5795727 | MS.gene07063:CDS |
AGAGGGCTGTGGGATCTGGA+TGG | 0.593338 | 7.2:-5795613 | None:intergenic |
ATGGTTATGTGTTGAAGTAT+AGG | 0.596238 | 7.2:-5795594 | None:intergenic |
AATTTGTGGTGGAGGAGGAG+AGG | 0.601207 | 7.2:-5795631 | None:intergenic |
TATAGGTGCAGCACATGCAA+GGG | 0.614000 | 7.2:+5795512 | MS.gene07063:CDS |
ATGTTTCTGACTCAAGTTTG+GGG | 0.614751 | 7.2:-5794341 | None:intergenic |
TCAAAGGCTCTCCATATCCA+AGG | 0.621296 | 7.2:+5794654 | MS.gene07063:CDS |
ATGTCCTCTGAGCAGTGTGT+TGG | 0.622572 | 7.2:-5795824 | None:intergenic |
TCGTTGAGCTAAATTTGTGG+TGG | 0.624880 | 7.2:-5795642 | None:intergenic |
TGCAAAATAGATGAAGACAT+AGG | 0.628453 | 7.2:-5796010 | None:intergenic |
CACTTGAATCAATCAAGAAG+GGG | 0.629385 | 7.2:-5796074 | None:intergenic |
TGTTTCTGACTCAAGTTTGG+GGG | 0.636435 | 7.2:-5794340 | None:intergenic |
TTTAACTGTGCATAGCAGAG+TGG | 0.661783 | 7.2:-5795929 | None:intergenic |
ATCTCCAACACACTGCTCAG+AGG | 0.702439 | 7.2:+5795820 | MS.gene07063:CDS |
AGAAAACGGTTGTGACTGTG+AGG | 0.708929 | 7.2:+5794549 | MS.gene07063:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TCATTTTCTCAAATTAATAT+TGG | + | chr7.2:5795393-5795412 | MS.gene07063:intron | 15.0% |
!! | AATATCATAAAAACTTGAGT+TGG | - | chr7.2:5795337-5795356 | None:intergenic | 20.0% |
!! | CATTAATTGAATCACATATA+TGG | + | chr7.2:5794721-5794740 | MS.gene07063:intron | 20.0% |
!!! | TTTTCCATATTTACTTTGAA+AGG | - | chr7.2:5795869-5795888 | None:intergenic | 20.0% |
! | AACATTAAACAAACTGCAAT+AGG | - | chr7.2:5795470-5795489 | None:intergenic | 25.0% |
! | AAGATCTTAAAACATCTCTA+AGG | - | chr7.2:5795279-5795298 | None:intergenic | 25.0% |
! | AATCTCAAGTATCTAAGAAA+CGG | + | chr7.2:5794382-5794401 | MS.gene07063:CDS | 25.0% |
! | AGATCCTTTCAAAGTAAATA+TGG | + | chr7.2:5795862-5795881 | MS.gene07063:CDS | 25.0% |
! | ATATTCTGACAGAATCAATA+GGG | + | chr7.2:5795017-5795036 | MS.gene07063:intron | 25.0% |
! | ATGATGATTATCATATCTAG+TGG | - | chr7.2:5794692-5794711 | None:intergenic | 25.0% |
! | TATATTCTGACAGAATCAAT+AGG | + | chr7.2:5795016-5795035 | MS.gene07063:intron | 25.0% |
! | TGTAACTAAAAAGAGATATG+AGG | - | chr7.2:5794982-5795001 | None:intergenic | 25.0% |
!! | TATTGCAGTTTGTTTAATGT+TGG | + | chr7.2:5795469-5795488 | MS.gene07063:intron | 25.0% |
!! | TTTTTGAATATAACCACATG+TGG | - | chr7.2:5795371-5795390 | None:intergenic | 25.0% |
AAATCTACAGGGGATATTAT+AGG | + | chr7.2:5795495-5795514 | MS.gene07063:intron | 30.0% | |
AATGTTGGTACAAATCTACA+GGG | + | chr7.2:5795484-5795503 | MS.gene07063:intron | 30.0% | |
ACACAATACTAATACAAGCT+TGG | + | chr7.2:5795154-5795173 | MS.gene07063:intron | 30.0% | |
ATGGTTATGTGTTGAAGTAT+AGG | - | chr7.2:5795597-5795616 | None:intergenic | 30.0% | |
ATTGTCCTTATATCAAGACA+TGG | - | chr7.2:5795240-5795259 | None:intergenic | 30.0% | |
CAAAATAGATCTTCTCTTAG+AGG | + | chr7.2:5795901-5795920 | MS.gene07063:CDS | 30.0% | |
CTTCAGATTAAATGAATGTC+CGG | - | chr7.2:5794866-5794885 | None:intergenic | 30.0% | |
GGACAATTACTCATAGAAAT+TGG | + | chr7.2:5795253-5795272 | MS.gene07063:intron | 30.0% | |
GTCACATTAAGAAACTTCTT+TGG | - | chr7.2:5795100-5795119 | None:intergenic | 30.0% | |
TAATGTTGGTACAAATCTAC+AGG | + | chr7.2:5795483-5795502 | MS.gene07063:intron | 30.0% | |
TATGGACAAAAACCAATCAA+AGG | + | chr7.2:5794638-5794657 | MS.gene07063:CDS | 30.0% | |
TATTCTGACAGAATCAATAG+GGG | + | chr7.2:5795018-5795037 | MS.gene07063:intron | 30.0% | |
TGCAAAATAGATGAAGACAT+AGG | - | chr7.2:5796013-5796032 | None:intergenic | 30.0% | |
TTAAGCCATGTCTTGATATA+AGG | + | chr7.2:5795232-5795251 | MS.gene07063:intron | 30.0% | |
TTCTTAGATACTTGAGATTC+TGG | - | chr7.2:5794381-5794400 | None:intergenic | 30.0% | |
TTTCTTCCTTAGAAGTAACT+GGG | - | chr7.2:5795703-5795722 | None:intergenic | 30.0% | |
! | GAACATAGAGTTCTGATATT+TGG | + | chr7.2:5794418-5794437 | MS.gene07063:intron | 30.0% |
! | GAAGATCTATTTTGTCAATG+TGG | - | chr7.2:5795895-5795914 | None:intergenic | 30.0% |
! | TAGAGTTCTGATATTTGGTT+TGG | + | chr7.2:5794423-5794442 | MS.gene07063:intron | 30.0% |
! | TTACTTTGAAAGGATCTTCT+TGG | - | chr7.2:5795859-5795878 | None:intergenic | 30.0% |
! | TTTTCTTCCTTAGAAGTAAC+TGG | - | chr7.2:5795704-5795723 | None:intergenic | 30.0% |
! | TTTTGTATAAGAACCACATG+TGG | + | chr7.2:5795355-5795374 | MS.gene07063:intron | 30.0% |
!!! | TGATTTTTTCGATGAACTTG+AGG | + | chr7.2:5795982-5796001 | MS.gene07063:CDS | 30.0% |
AGAACAGAAACAGATAGAAG+AGG | + | chr7.2:5795727-5795746 | MS.gene07063:CDS | 35.0% | |
ATATATGTTGTGCATGTCTC+AGG | + | chr7.2:5794516-5794535 | MS.gene07063:intron | 35.0% | |
ATGTTGGTACAAATCTACAG+GGG | + | chr7.2:5795485-5795504 | MS.gene07063:intron | 35.0% | |
CAGGAAAATGGTTGAGAAAA+CGG | + | chr7.2:5794535-5794554 | MS.gene07063:intron | 35.0% | |
GTCAATATTAGTATCGTGTC+CGG | + | chr7.2:5795427-5795446 | MS.gene07063:intron | 35.0% | |
TTGAATGTCACTACATGTGT+TGG | + | chr7.2:5794810-5794829 | MS.gene07063:intron | 35.0% | |
! | AAGGACTTCCTTCAGATTTT+TGG | + | chr7.2:5794603-5794622 | MS.gene07063:CDS | 35.0% |
! | AGATGTTTCTGACTCAAGTT+TGG | - | chr7.2:5794346-5794365 | None:intergenic | 35.0% |
! | ATCTTTGGTTGTTTCGGTTT+CGG | - | chr7.2:5795678-5795697 | None:intergenic | 35.0% |
! | ATGTTTCTGACTCAAGTTTG+GGG | - | chr7.2:5794344-5794363 | None:intergenic | 35.0% |
! | CATCTATTTTGCACTTTACG+AGG | + | chr7.2:5796020-5796039 | MS.gene07063:CDS | 35.0% |
! | GATGTTTCTGACTCAAGTTT+GGG | - | chr7.2:5794345-5794364 | None:intergenic | 35.0% |
!! | CTTCTATCTGTTTCTGTTCT+TGG | - | chr7.2:5795727-5795746 | None:intergenic | 35.0% |
!!! | GCTTCTCTCTACTTGTTTTT+TGG | - | chr7.2:5795546-5795565 | None:intergenic | 35.0% |
!!! | GGAGCATTTTTTCTGATGAA+AGG | + | chr7.2:5796041-5796060 | MS.gene07063:CDS | 35.0% |
!!! | TTCCTTCAGATTTTTGGTCT+TGG | + | chr7.2:5794609-5794628 | MS.gene07063:CDS | 35.0% |
!!! | TTTTGGTCTTGGAGGAAATA+TGG | + | chr7.2:5794620-5794639 | MS.gene07063:CDS | 35.0% |
AAGAATGCACACCTTGGATA+TGG | - | chr7.2:5794668-5794687 | None:intergenic | 40.0% | |
AATGTCACTACATGTGTTGG+TGG | + | chr7.2:5794813-5794832 | MS.gene07063:intron | 40.0% | |
AGAAGTAACTGGGAGATCTT+TGG | - | chr7.2:5795693-5795712 | None:intergenic | 40.0% | |
AGATCTCCCAGTTACTTCTA+AGG | + | chr7.2:5795694-5795713 | MS.gene07063:CDS | 40.0% | |
CTCCAAGACCAAAAATCTGA+AGG | - | chr7.2:5794614-5794633 | None:intergenic | 40.0% | |
GATTGGAGAGAATGTTAGCA+AGG | + | chr7.2:5794571-5794590 | MS.gene07063:CDS | 40.0% | |
GTTAGCAAGGTGAAGAATGA+AGG | + | chr7.2:5794584-5794603 | MS.gene07063:CDS | 40.0% | |
TCGTTGAGCTAAATTTGTGG+TGG | - | chr7.2:5795645-5795664 | None:intergenic | 40.0% | |
TGGGAGATCTTTGGTTGTTT+CGG | - | chr7.2:5795684-5795703 | None:intergenic | 40.0% | |
TGGTCGTTGAGCTAAATTTG+TGG | - | chr7.2:5795648-5795667 | None:intergenic | 40.0% | |
TTGAGCTAAATTTGTGGTGG+AGG | - | chr7.2:5795642-5795661 | None:intergenic | 40.0% | |
TTGTGCATGTCTCAGGAAAA+TGG | + | chr7.2:5794523-5794542 | MS.gene07063:intron | 40.0% | |
TTTAACTGTGCATAGCAGAG+TGG | - | chr7.2:5795932-5795951 | None:intergenic | 40.0% | |
! | GTTTCGGTTTCGGATTCTTT+TGG | - | chr7.2:5795668-5795687 | None:intergenic | 40.0% |
! | TGTTTCTGACTCAAGTTTGG+GGG | - | chr7.2:5794343-5794362 | None:intergenic | 40.0% |
!!! | CTTCAGATTTTTGGTCTTGG+AGG | + | chr7.2:5794612-5794631 | MS.gene07063:CDS | 40.0% |
AGAAAACGGTTGTGACTGTG+AGG | + | chr7.2:5794549-5794568 | MS.gene07063:CDS | 45.0% | |
AGTGGAAAGAATGCACACCT+TGG | - | chr7.2:5794674-5794693 | None:intergenic | 45.0% | |
CTTTGGATTCTCTTGCCACT+TGG | - | chr7.2:5795083-5795102 | None:intergenic | 45.0% | |
GGATATGGAGAGCCTTTGAT+TGG | - | chr7.2:5794653-5794672 | None:intergenic | 45.0% | |
GTTAGTGTCAGTGTCGTCTT+CGG | - | chr7.2:5794750-5794769 | None:intergenic | 45.0% | |
TATAGGTGCAGCACATGCAA+GGG | + | chr7.2:5795512-5795531 | MS.gene07063:CDS | 45.0% | |
TCAAAGGCTCTCCATATCCA+AGG | + | chr7.2:5794654-5794673 | MS.gene07063:CDS | 45.0% | |
TTATAGGTGCAGCACATGCA+AGG | + | chr7.2:5795511-5795530 | MS.gene07063:CDS | 45.0% | |
! | AGCTAAATTTGTGGTGGAGG+AGG | - | chr7.2:5795639-5795658 | None:intergenic | 45.0% |
!! | GGAAGTGCTAACACAAACAC+CGG | - | chr7.2:5795449-5795468 | None:intergenic | 45.0% |
!! | TGTTGGTGGTATGTCAGTGA+CGG | + | chr7.2:5794827-5794846 | MS.gene07063:intron | 45.0% |
!!! | TTTTTAAATTTTATAGTTTT+TGG | + | chr7.2:5794457-5794476 | MS.gene07063:intron | 5.0% |
AACGAGAGTCACTGAACCTG+TGG | + | chr7.2:5795056-5795075 | MS.gene07063:intron | 50.0% | |
ACAGGTTCAGTGACTCTCGT+TGG | - | chr7.2:5795057-5795076 | None:intergenic | 50.0% | |
ACGGTTGTGACTGTGAGGAT+TGG | + | chr7.2:5794554-5794573 | MS.gene07063:CDS | 50.0% | |
ATCTCCAACACACTGCTCAG+AGG | + | chr7.2:5795820-5795839 | MS.gene07063:CDS | 50.0% | |
ATGTCCTCTGAGCAGTGTGT+TGG | - | chr7.2:5795827-5795846 | None:intergenic | 50.0% | |
TGGTATGTCAGTGACGGTGT+CGG | + | chr7.2:5794833-5794852 | MS.gene07063:intron | 50.0% | |
TTCTGACTCAAGTTTGGGGG+AGG | - | chr7.2:5794340-5794359 | None:intergenic | 50.0% | |
! | AATTTGTGGTGGAGGAGGAG+AGG | - | chr7.2:5795634-5795653 | None:intergenic | 50.0% |
! | ATTTGTGGTGGAGGAGGAGA+GGG | - | chr7.2:5795633-5795652 | None:intergenic | 50.0% |
CACTGAACCTGTGGTCCAAG+TGG | + | chr7.2:5795065-5795084 | MS.gene07063:intron | 55.0% | |
! | TCTCTTGCCACTTGGACCAC+AGG | - | chr7.2:5795075-5795094 | None:intergenic | 55.0% |
!! | ATGTCAGTGACGGTGTCGGT+CGG | + | chr7.2:5794837-5794856 | MS.gene07063:intron | 55.0% |
AGAGGGCTGTGGGATCTGGA+TGG | - | chr7.2:5795616-5795635 | None:intergenic | 60.0% | |
GAGGAGAGGGCTGTGGGATC+TGG | - | chr7.2:5795620-5795639 | None:intergenic | 65.0% | |
GTGGAGGAGGAGAGGGCTGT+GGG | - | chr7.2:5795626-5795645 | None:intergenic | 65.0% | |
!! | TGACGGTGTCGGTCGGACAC+CGG | + | chr7.2:5794844-5794863 | MS.gene07063:intron | 65.0% |
GGTGGAGGAGGAGAGGGCTG+TGG | - | chr7.2:5795627-5795646 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 5794324 | 5796084 | 5794324 | ID=MS.gene07063 |
chr7.2 | mRNA | 5794324 | 5796084 | 5794324 | ID=MS.gene07063.t1;Parent=MS.gene07063 |
chr7.2 | exon | 5794324 | 5794403 | 5794324 | ID=MS.gene07063.t1.exon1;Parent=MS.gene07063.t1 |
chr7.2 | CDS | 5794324 | 5794403 | 5794324 | ID=cds.MS.gene07063.t1;Parent=MS.gene07063.t1 |
chr7.2 | exon | 5794538 | 5794675 | 5794538 | ID=MS.gene07063.t1.exon2;Parent=MS.gene07063.t1 |
chr7.2 | CDS | 5794538 | 5794675 | 5794538 | ID=cds.MS.gene07063.t1;Parent=MS.gene07063.t1 |
chr7.2 | exon | 5795505 | 5796084 | 5795505 | ID=MS.gene07063.t1.exon3;Parent=MS.gene07063.t1 |
chr7.2 | CDS | 5795505 | 5796084 | 5795505 | ID=cds.MS.gene07063.t1;Parent=MS.gene07063.t1 |
Gene Sequence |
Protein sequence |