Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070638.t1 | AES77465.1 | 85.2 | 487 | 70 | 2 | 1 | 486 | 1 | 486 | 7.00E-229 | 803.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070638.t1 | Q93ZL5 | 41.9 | 387 | 162 | 9 | 116 | 486 | 118 | 457 | 1.9e-57 | 224.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070638.t1 | G7L202 | 85.2 | 487 | 70 | 2 | 1 | 486 | 1 | 486 | 5.0e-229 | 803.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene070638.t1 | TF | C2C2-Dof |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070638.t1 | MTR_7g010950 | 90.965 | 487 | 42 | 2 | 1 | 486 | 1 | 486 | 0.0 | 892 |
| MS.gene070638.t1 | MTR_6g012450 | 57.715 | 499 | 194 | 9 | 1 | 486 | 1 | 495 | 2.34e-178 | 509 |
| MS.gene070638.t1 | MTR_4g082060 | 43.548 | 496 | 235 | 13 | 1 | 484 | 1 | 463 | 6.28e-115 | 347 |
| MS.gene070638.t1 | MTR_3g435480 | 42.157 | 510 | 226 | 17 | 1 | 486 | 1 | 465 | 2.53e-95 | 296 |
| MS.gene070638.t1 | MTR_5g041530 | 36.546 | 498 | 179 | 15 | 4 | 484 | 2 | 379 | 7.79e-67 | 219 |
| MS.gene070638.t1 | MTR_5g041400 | 34.560 | 489 | 183 | 18 | 4 | 484 | 2 | 361 | 1.43e-64 | 213 |
| MS.gene070638.t1 | MTR_8g044220 | 34.000 | 500 | 239 | 21 | 5 | 485 | 11 | 438 | 1.44e-63 | 213 |
| MS.gene070638.t1 | MTR_5g041380 | 35.152 | 495 | 180 | 20 | 4 | 484 | 2 | 369 | 1.78e-60 | 202 |
| MS.gene070638.t1 | MTR_7g086780 | 35.664 | 429 | 201 | 14 | 78 | 485 | 47 | 421 | 2.85e-56 | 193 |
| MS.gene070638.t1 | MTR_6g027460 | 37.631 | 287 | 105 | 9 | 2 | 262 | 7 | 245 | 2.50e-44 | 160 |
| MS.gene070638.t1 | MTR_6g027450 | 49.007 | 151 | 65 | 2 | 95 | 233 | 48 | 198 | 1.33e-41 | 151 |
| MS.gene070638.t1 | MTR_5g041420 | 40.977 | 266 | 108 | 8 | 6 | 247 | 4 | 244 | 2.75e-40 | 147 |
| MS.gene070638.t1 | MTR_2g016030 | 83.333 | 60 | 10 | 0 | 130 | 189 | 41 | 100 | 2.73e-33 | 124 |
| MS.gene070638.t1 | MTR_8g079060 | 62.857 | 70 | 25 | 1 | 136 | 204 | 29 | 98 | 3.33e-25 | 103 |
| MS.gene070638.t1 | MTR_3g091820 | 66.667 | 60 | 20 | 0 | 133 | 192 | 40 | 99 | 1.10e-24 | 104 |
| MS.gene070638.t1 | MTR_4g022370 | 62.903 | 62 | 23 | 0 | 128 | 189 | 74 | 135 | 2.39e-24 | 104 |
| MS.gene070638.t1 | MTR_8g479350 | 75.472 | 53 | 13 | 0 | 138 | 190 | 70 | 122 | 3.39e-24 | 103 |
| MS.gene070638.t1 | MTR_8g027295 | 66.102 | 59 | 20 | 0 | 131 | 189 | 19 | 77 | 3.88e-24 | 102 |
| MS.gene070638.t1 | MTR_8g015840 | 64.516 | 62 | 22 | 0 | 136 | 197 | 20 | 81 | 4.69e-24 | 100 |
| MS.gene070638.t1 | MTR_4g109980 | 71.698 | 53 | 15 | 0 | 134 | 186 | 38 | 90 | 4.84e-24 | 102 |
| MS.gene070638.t1 | MTR_2g093220 | 56.098 | 82 | 28 | 1 | 108 | 189 | 20 | 93 | 5.70e-24 | 102 |
| MS.gene070638.t1 | MTR_2g096740 | 47.000 | 100 | 46 | 1 | 109 | 208 | 57 | 149 | 6.18e-24 | 102 |
| MS.gene070638.t1 | MTR_2g096740 | 47.000 | 100 | 46 | 1 | 109 | 208 | 42 | 134 | 6.97e-24 | 101 |
| MS.gene070638.t1 | MTR_2g059540 | 75.510 | 49 | 12 | 0 | 136 | 184 | 31 | 79 | 9.21e-24 | 99.4 |
| MS.gene070638.t1 | MTR_4g088580 | 47.222 | 108 | 41 | 3 | 93 | 189 | 6 | 108 | 1.25e-23 | 102 |
| MS.gene070638.t1 | MTR_8g068210 | 53.333 | 75 | 35 | 0 | 115 | 189 | 11 | 85 | 1.83e-23 | 101 |
| MS.gene070638.t1 | MTR_4g461080 | 66.154 | 65 | 21 | 1 | 125 | 188 | 17 | 81 | 3.11e-23 | 99.8 |
| MS.gene070638.t1 | MTR_1g056810 | 54.321 | 81 | 34 | 2 | 131 | 208 | 6 | 86 | 6.93e-23 | 99.0 |
| MS.gene070638.t1 | MTR_3g090430 | 68.421 | 57 | 17 | 1 | 134 | 189 | 48 | 104 | 7.10e-23 | 99.8 |
| MS.gene070638.t1 | MTR_1g077600 | 67.925 | 53 | 17 | 0 | 136 | 188 | 43 | 95 | 8.47e-23 | 98.2 |
| MS.gene070638.t1 | MTR_4g063780 | 57.353 | 68 | 29 | 0 | 129 | 196 | 68 | 135 | 1.01e-22 | 99.4 |
| MS.gene070638.t1 | MTR_1g077600 | 67.925 | 53 | 17 | 0 | 136 | 188 | 43 | 95 | 1.01e-22 | 98.6 |
| MS.gene070638.t1 | MTR_7g024670 | 74.510 | 51 | 13 | 0 | 138 | 188 | 79 | 129 | 1.30e-22 | 99.8 |
| MS.gene070638.t1 | MTR_2g013370 | 56.962 | 79 | 19 | 2 | 125 | 189 | 21 | 98 | 2.10e-22 | 97.1 |
| MS.gene070638.t1 | MTR_5g031440 | 65.455 | 55 | 19 | 0 | 132 | 186 | 39 | 93 | 6.55e-22 | 97.1 |
| MS.gene070638.t1 | MTR_4g089095 | 69.231 | 52 | 16 | 0 | 138 | 189 | 52 | 103 | 6.71e-22 | 96.3 |
| MS.gene070638.t1 | MTR_7g059400 | 59.677 | 62 | 25 | 0 | 128 | 189 | 68 | 129 | 8.89e-22 | 96.7 |
| MS.gene070638.t1 | MTR_4g089095 | 69.231 | 52 | 16 | 0 | 138 | 189 | 18 | 69 | 9.56e-22 | 95.1 |
| MS.gene070638.t1 | MTR_2g014060 | 72.000 | 50 | 14 | 0 | 138 | 187 | 27 | 76 | 1.11e-21 | 96.3 |
| MS.gene070638.t1 | MTR_2g014170 | 73.469 | 49 | 13 | 0 | 136 | 184 | 45 | 93 | 1.77e-21 | 95.1 |
| MS.gene070638.t1 | MTR_3g077750 | 52.874 | 87 | 40 | 1 | 126 | 211 | 50 | 136 | 2.13e-21 | 95.5 |
| MS.gene070638.t1 | MTR_3g118510 | 82.979 | 47 | 4 | 1 | 61 | 107 | 29 | 71 | 1.74e-13 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070638.t1 | AT5G39660 | 41.176 | 510 | 216 | 18 | 6 | 486 | 3 | 457 | 6.71e-93 | 290 |
| MS.gene070638.t1 | AT5G39660 | 41.176 | 510 | 216 | 18 | 6 | 486 | 3 | 457 | 6.71e-93 | 290 |
| MS.gene070638.t1 | AT5G39660 | 41.176 | 510 | 216 | 18 | 6 | 486 | 3 | 457 | 6.71e-93 | 290 |
| MS.gene070638.t1 | AT3G47500 | 42.771 | 498 | 218 | 23 | 1 | 484 | 2 | 446 | 1.94e-89 | 280 |
| MS.gene070638.t1 | AT5G62430 | 39.589 | 389 | 112 | 17 | 106 | 484 | 21 | 296 | 1.63e-60 | 201 |
| MS.gene070638.t1 | AT1G69570 | 33.069 | 505 | 209 | 20 | 1 | 485 | 1 | 396 | 6.52e-51 | 178 |
| MS.gene070638.t1 | AT1G26790 | 32.911 | 395 | 130 | 18 | 111 | 485 | 92 | 371 | 6.39e-39 | 145 |
| MS.gene070638.t1 | AT1G29160 | 85.000 | 60 | 9 | 0 | 130 | 189 | 56 | 115 | 4.22e-35 | 129 |
| MS.gene070638.t1 | AT2G34140 | 56.075 | 107 | 36 | 3 | 94 | 189 | 5 | 111 | 2.29e-33 | 124 |
| MS.gene070638.t1 | AT5G60850 | 57.333 | 75 | 32 | 0 | 119 | 193 | 34 | 108 | 2.51e-25 | 106 |
| MS.gene070638.t1 | AT1G51700 | 63.889 | 72 | 21 | 2 | 136 | 202 | 33 | 104 | 3.04e-25 | 103 |
| MS.gene070638.t1 | AT5G60200 | 66.129 | 62 | 21 | 0 | 132 | 193 | 51 | 112 | 5.35e-25 | 104 |
| MS.gene070638.t1 | AT3G55370 | 59.420 | 69 | 28 | 0 | 132 | 200 | 72 | 140 | 1.75e-24 | 104 |
| MS.gene070638.t1 | AT3G45610 | 42.453 | 106 | 60 | 1 | 101 | 205 | 5 | 110 | 1.79e-24 | 102 |
| MS.gene070638.t1 | AT3G55370 | 59.420 | 69 | 28 | 0 | 132 | 200 | 72 | 140 | 1.92e-24 | 104 |
| MS.gene070638.t1 | AT3G61850 | 65.079 | 63 | 22 | 0 | 131 | 193 | 57 | 119 | 2.37e-24 | 103 |
| MS.gene070638.t1 | AT3G61850 | 65.079 | 63 | 22 | 0 | 131 | 193 | 57 | 119 | 2.37e-24 | 103 |
| MS.gene070638.t1 | AT3G55370 | 59.420 | 69 | 28 | 0 | 132 | 200 | 117 | 185 | 2.40e-24 | 104 |
| MS.gene070638.t1 | AT3G61850 | 65.079 | 63 | 22 | 0 | 131 | 193 | 69 | 131 | 2.90e-24 | 103 |
| MS.gene070638.t1 | AT3G61850 | 65.079 | 63 | 22 | 0 | 131 | 193 | 57 | 119 | 4.14e-24 | 102 |
| MS.gene070638.t1 | AT3G61850 | 65.079 | 63 | 22 | 0 | 131 | 193 | 69 | 131 | 4.37e-24 | 103 |
| MS.gene070638.t1 | AT2G28810 | 63.934 | 61 | 22 | 0 | 127 | 187 | 68 | 128 | 6.33e-24 | 102 |
| MS.gene070638.t1 | AT3G50410 | 70.175 | 57 | 17 | 0 | 136 | 192 | 30 | 86 | 6.48e-24 | 100 |
| MS.gene070638.t1 | AT2G28510 | 73.214 | 56 | 15 | 0 | 138 | 193 | 50 | 105 | 8.44e-24 | 101 |
| MS.gene070638.t1 | AT2G37590 | 57.576 | 66 | 28 | 0 | 124 | 189 | 77 | 142 | 9.43e-24 | 102 |
| MS.gene070638.t1 | AT2G28810 | 63.934 | 61 | 22 | 0 | 127 | 187 | 85 | 145 | 9.60e-24 | 102 |
| MS.gene070638.t1 | AT3G21270 | 76.471 | 51 | 12 | 0 | 138 | 188 | 31 | 81 | 9.66e-24 | 99.4 |
| MS.gene070638.t1 | AT4G24060 | 68.421 | 57 | 18 | 0 | 133 | 189 | 50 | 106 | 1.21e-23 | 102 |
| MS.gene070638.t1 | AT5G66940 | 35.227 | 176 | 102 | 5 | 136 | 299 | 32 | 207 | 1.95e-23 | 99.0 |
| MS.gene070638.t1 | AT1G07640 | 74.510 | 51 | 13 | 0 | 138 | 188 | 23 | 73 | 2.76e-23 | 99.8 |
| MS.gene070638.t1 | AT1G07640 | 74.510 | 51 | 13 | 0 | 138 | 188 | 79 | 129 | 4.71e-23 | 100 |
| MS.gene070638.t1 | AT1G07640 | 74.510 | 51 | 13 | 0 | 138 | 188 | 87 | 137 | 5.72e-23 | 100 |
| MS.gene070638.t1 | AT5G65590 | 54.321 | 81 | 30 | 1 | 111 | 191 | 23 | 96 | 7.39e-23 | 99.4 |
| MS.gene070638.t1 | AT1G28310 | 72.222 | 54 | 15 | 0 | 136 | 189 | 27 | 80 | 9.19e-23 | 99.0 |
| MS.gene070638.t1 | AT1G28310 | 72.222 | 54 | 15 | 0 | 136 | 189 | 51 | 104 | 1.39e-22 | 99.0 |
| MS.gene070638.t1 | AT4G38000 | 64.407 | 59 | 20 | 1 | 135 | 192 | 40 | 98 | 1.96e-22 | 96.7 |
| MS.gene070638.t1 | AT1G47655 | 59.701 | 67 | 24 | 1 | 118 | 184 | 14 | 77 | 2.15e-22 | 95.5 |
| MS.gene070638.t1 | AT1G64620 | 67.308 | 52 | 17 | 0 | 133 | 184 | 46 | 97 | 2.17e-22 | 98.6 |
| MS.gene070638.t1 | AT1G21340 | 63.934 | 61 | 20 | 1 | 138 | 196 | 40 | 100 | 2.56e-22 | 96.7 |
| MS.gene070638.t1 | AT5G02460 | 61.290 | 62 | 24 | 0 | 128 | 189 | 87 | 148 | 3.58e-22 | 99.0 |
| MS.gene070638.t1 | AT3G52440 | 52.941 | 85 | 36 | 2 | 109 | 189 | 13 | 97 | 3.59e-22 | 96.3 |
| MS.gene070638.t1 | AT3G52440 | 66.667 | 57 | 18 | 1 | 134 | 189 | 22 | 78 | 4.83e-22 | 95.5 |
| MS.gene070638.t1 | AT4G00940 | 64.407 | 59 | 21 | 0 | 131 | 189 | 63 | 121 | 9.94e-22 | 95.9 |
| MS.gene070638.t1 | AT4G00940 | 64.407 | 59 | 21 | 0 | 131 | 189 | 63 | 121 | 9.94e-22 | 95.9 |
| MS.gene070638.t1 | AT4G00940 | 64.407 | 59 | 21 | 0 | 131 | 189 | 63 | 121 | 9.94e-22 | 95.9 |
| MS.gene070638.t1 | AT4G21050 | 58.209 | 67 | 28 | 0 | 123 | 189 | 11 | 77 | 2.71e-21 | 92.4 |
| MS.gene070638.t1 | AT2G46590 | 64.151 | 53 | 19 | 0 | 131 | 183 | 63 | 115 | 1.08e-20 | 94.0 |
| MS.gene070638.t1 | AT2G46590 | 64.151 | 53 | 19 | 0 | 131 | 183 | 75 | 127 | 1.19e-20 | 94.0 |
| MS.gene070638.t1 | AT5G62940 | 62.295 | 61 | 22 | 1 | 127 | 186 | 63 | 123 | 2.24e-20 | 93.2 |
| MS.gene070638.t1 | AT4G21040 | 62.264 | 53 | 20 | 0 | 138 | 190 | 27 | 79 | 2.08e-18 | 84.7 |
| MS.gene070638.t1 | AT4G21080 | 60.377 | 53 | 21 | 0 | 138 | 190 | 27 | 79 | 1.02e-17 | 83.2 |
| MS.gene070638.t1 | AT4G21030 | 40.217 | 92 | 50 | 3 | 121 | 209 | 8 | 97 | 2.01e-12 | 66.6 |
Find 113 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTCTATCCTGCAACTTAT+TGG | 0.149800 | 7.1:-84514331 | MS.gene070638:CDS |
| CCAACATGAATTTCTGAAAT+AGG | 0.172204 | 7.1:+84516803 | None:intergenic |
| TCCTCCAAGAAGACTCTTTC+AGG | 0.211135 | 7.1:-84514030 | MS.gene070638:CDS |
| ATTCTATCCTGCAACTTATT+GGG | 0.246220 | 7.1:-84514330 | MS.gene070638:CDS |
| GCAAGAACTGCCAGAGATAT+TGG | 0.302290 | 7.1:-84514871 | MS.gene070638:CDS |
| GAGAGTTTGTAGTAGAGTTA+TGG | 0.354581 | 7.1:+84514240 | None:intergenic |
| AATGCCTGAAAGAGTCTTCT+TGG | 0.358307 | 7.1:+84514026 | None:intergenic |
| GACTCTGCGATCAAACTGTT+TGG | 0.377035 | 7.1:-84516836 | MS.gene070638:CDS |
| CAATGTAACAACCTCCCTTT+CGG | 0.395854 | 7.1:+84515054 | None:intergenic |
| GTGCAAAATTACACAAGAAA+TGG | 0.400392 | 7.1:-84514629 | MS.gene070638:CDS |
| TCAGTTCTAGAGGCTGCATC+TGG | 0.404528 | 7.1:+84515100 | None:intergenic |
| TGCACCTTCCGTCGACTTTG+TGG | 0.406190 | 7.1:+84514517 | None:intergenic |
| AGCTCTTTCTGGACAACACT+TGG | 0.410378 | 7.1:-84514080 | MS.gene070638:CDS |
| CTCCCTTGAATGTTTACCTA+AGG | 0.416607 | 7.1:+84514214 | None:intergenic |
| CTTGAATGTTTACCTAAGGT+TGG | 0.421534 | 7.1:+84514218 | None:intergenic |
| AACGGTACAATCCTTACATT+TGG | 0.421611 | 7.1:-84514710 | MS.gene070638:CDS |
| CAACCTTAGGTAAACATTCA+AGG | 0.427611 | 7.1:-84514217 | MS.gene070638:CDS |
| TTCAAAGACCGAAGAAGAAC+AGG | 0.434370 | 7.1:-84515026 | MS.gene070638:CDS |
| TCGCTTCTGAGACAGTTATC+TGG | 0.434484 | 7.1:+84514771 | None:intergenic |
| TGTCTCGTCCTGTTCTTCTT+CGG | 0.435826 | 7.1:+84515018 | None:intergenic |
| TGTGGTTTCCTAAAACTTTG+AGG | 0.440466 | 7.1:-84514130 | MS.gene070638:CDS |
| CCTAGACAATGCCGCCGGAT+TGG | 0.441868 | 7.1:+84513947 | None:intergenic |
| GAGTTATGGTTTGCACCATT+CGG | 0.443392 | 7.1:+84514254 | None:intergenic |
| CACCTTGTGGTGGGAAGCTA+TGG | 0.449902 | 7.1:+84514456 | None:intergenic |
| TTCAGTCTTGCAAGCCAATC+CGG | 0.451150 | 7.1:-84513961 | MS.gene070638:CDS |
| GTACTGCCCCAATAAGTTGC+AGG | 0.454552 | 7.1:+84514323 | None:intergenic |
| CACCGGCAGTCCAATATCTC+TGG | 0.470878 | 7.1:+84514861 | None:intergenic |
| TCATGAATACAGAACACATT+GGG | 0.471330 | 7.1:-84515190 | MS.gene070638:intron |
| CTCGTTTGCATCGGATTCCA+TGG | 0.476868 | 7.1:+84514401 | None:intergenic |
| GCAGTTCTTGCAGAAATGAC+GGG | 0.478653 | 7.1:+84514883 | None:intergenic |
| GATTGTACCGTTGCATTTCA+AGG | 0.479174 | 7.1:+84514721 | None:intergenic |
| ATCCTCGTCTTGTTCTTCAC+TGG | 0.479956 | 7.1:+84514565 | None:intergenic |
| GGAAAATCCTGATGGACAAA+AGG | 0.486001 | 7.1:+84514358 | None:intergenic |
| TCGGATGAAAAGAATGAAGA+TGG | 0.489260 | 7.1:-84515157 | MS.gene070638:CDS |
| CAATAAGTTGCAGGATAGAA+TGG | 0.492021 | 7.1:+84514332 | None:intergenic |
| CCAATCCGGCGGCATTGTCT+AGG | 0.494145 | 7.1:-84513947 | MS.gene070638:CDS |
| GATGGACAAAAGGCCGGTGG+TGG | 0.498700 | 7.1:+84514368 | None:intergenic |
| ACTTTCCTCATGGAACTCCT+TGG | 0.498742 | 7.1:-84514430 | MS.gene070638:CDS |
| ACTACAAACTCTCCAACCTT+AGG | 0.501563 | 7.1:-84514230 | MS.gene070638:CDS |
| GGCAGTTCTTGCAGAAATGA+CGG | 0.505612 | 7.1:+84514882 | None:intergenic |
| TTTCTGCGACCGGCACCTAC+CGG | 0.513131 | 7.1:+84514821 | None:intergenic |
| ATCAGTGAGCTCGTTTGCAT+CGG | 0.516857 | 7.1:+84514392 | None:intergenic |
| CGTGGAATGTTCCATGCACT+TGG | 0.517020 | 7.1:+84514296 | None:intergenic |
| CCTATTTCAGAAATTCATGT+TGG | 0.517045 | 7.1:-84516803 | MS.gene070638:CDS |
| GTGAGTTGGATCCAAATGTA+AGG | 0.517691 | 7.1:+84514699 | None:intergenic |
| TTCTATCCTGCAACTTATTG+GGG | 0.518618 | 7.1:-84514329 | MS.gene070638:CDS |
| AGCTTGTTCTTGAGATACAT+TGG | 0.519714 | 7.1:+84514490 | None:intergenic |
| TTGTCCTCGTTGTAGTAGCA+TGG | 0.523986 | 7.1:-84514948 | MS.gene070638:CDS |
| TGCCAGAGATATTGGACTGC+CGG | 0.524544 | 7.1:-84514863 | MS.gene070638:CDS |
| TACCGTTGCATTTCAAGGAA+GGG | 0.526711 | 7.1:+84514726 | None:intergenic |
| TCTAGAGGCTGCATCTGGAT+TGG | 0.530451 | 7.1:+84515105 | None:intergenic |
| TGAATCACATAAAGGTGAGT+TGG | 0.531921 | 7.1:+84514685 | None:intergenic |
| GATGCCACTGAATCACATAA+AGG | 0.533836 | 7.1:+84514677 | None:intergenic |
| GTACCGTTGCATTTCAAGGA+AGG | 0.535966 | 7.1:+84514725 | None:intergenic |
| TCTTGCAGAAATGACGGGGT+TGG | 0.542522 | 7.1:+84514888 | None:intergenic |
| ACCTACCGGTACGTTTCTCA+TGG | 0.545443 | 7.1:+84514835 | None:intergenic |
| GCTCTTTCTGGACAACACTT+GGG | 0.545826 | 7.1:-84514079 | MS.gene070638:CDS |
| GCCTGAAAGAGTCTTCTTGG+AGG | 0.545989 | 7.1:+84514029 | None:intergenic |
| TACGTTTCTCATGGTTCCAC+CGG | 0.546783 | 7.1:+84514844 | None:intergenic |
| TTTGCACCATTCGGTGATGA+TGG | 0.554189 | 7.1:+84514263 | None:intergenic |
| ATTCTTCTGTTGATTGTGCA+AGG | 0.563829 | 7.1:+84515131 | None:intergenic |
| CAAGGTGGCTACTTTCCTCA+TGG | 0.567490 | 7.1:-84514440 | MS.gene070638:CDS |
| CACCCTTCCTTGAAATGCAA+CGG | 0.569292 | 7.1:-84514728 | MS.gene070638:CDS |
| TTGTTCTTGAGATACATTGG+TGG | 0.575585 | 7.1:+84514493 | None:intergenic |
| GAACTCCTTGGCATTTACCA+TGG | 0.576696 | 7.1:-84514418 | MS.gene070638:CDS |
| CAAGAACAAGCTATGTGGAA+TGG | 0.577149 | 7.1:-84514479 | MS.gene070638:CDS |
| AGATTCTTCATCAGTTCTAG+AGG | 0.577988 | 7.1:+84515090 | None:intergenic |
| AACCTTAGGTAAACATTCAA+GGG | 0.580141 | 7.1:-84514216 | MS.gene070638:CDS |
| CTCACCTTTATGTGATTCAG+TGG | 0.580504 | 7.1:-84514681 | MS.gene070638:CDS |
| GCAGTACTATGCCAAGTGCA+TGG | 0.590323 | 7.1:-84514307 | MS.gene070638:CDS |
| AATGGCATGGAAAATCCTGA+TGG | 0.590674 | 7.1:+84514350 | None:intergenic |
| TGTTACTGTATCCACCGAAA+GGG | 0.590675 | 7.1:-84515068 | MS.gene070638:CDS |
| TATCTCAAGAACAAGCTATG+TGG | 0.592377 | 7.1:-84514484 | MS.gene070638:CDS |
| CAAGTGCATGGAACATTCCA+CGG | 0.594597 | 7.1:-84514295 | MS.gene070638:CDS |
| GGCCATAGCTTCCCACCACA+AGG | 0.598341 | 7.1:-84514458 | MS.gene070638:CDS |
| AGAAACGTACCGGTAGGTGC+CGG | 0.600214 | 7.1:-84514830 | MS.gene070638:CDS |
| AATCCTGATGGACAAAAGGC+CGG | 0.603585 | 7.1:+84514362 | None:intergenic |
| GGAAAGTAGCCACCTTGTGG+TGG | 0.603675 | 7.1:+84514446 | None:intergenic |
| CTGTTACTGTATCCACCGAA+AGG | 0.610263 | 7.1:-84515069 | MS.gene070638:CDS |
| ACCTTCCGTCGACTTTGTGG+AGG | 0.610776 | 7.1:+84514520 | None:intergenic |
| GGATTCCATGGTAAATGCCA+AGG | 0.611774 | 7.1:+84514413 | None:intergenic |
| CTAAAATCAAGCGAAGGAGA+TGG | 0.613491 | 7.1:-84514182 | MS.gene070638:CDS |
| TTAGCGAAGAAAAGAGCTTG+TGG | 0.614398 | 7.1:-84514148 | MS.gene070638:CDS |
| TGTAACAACCTCCCTTTCGG+TGG | 0.618442 | 7.1:+84515057 | None:intergenic |
| GAAAGTAGCCACCTTGTGGT+GGG | 0.619044 | 7.1:+84514447 | None:intergenic |
| GGATCAATCAAATAAATCGT+CGG | 0.621204 | 7.1:-84514546 | MS.gene070638:CDS |
| GATGATGGTTGTGCTTGCCG+TGG | 0.621977 | 7.1:+84514278 | None:intergenic |
| TTTGAGGATTGATGACTCTG+AGG | 0.623626 | 7.1:-84514114 | MS.gene070638:CDS |
| TCTTGTTCTTCACTGGTACG+AGG | 0.624534 | 7.1:+84514572 | None:intergenic |
| ATGCTACTACAACGAGGACA+AGG | 0.624918 | 7.1:+84514950 | None:intergenic |
| AGTTGCAGGATAGAATGGCA+TGG | 0.625575 | 7.1:+84514337 | None:intergenic |
| GAGCTCACTGATTCCACCAC+CGG | 0.627819 | 7.1:-84514381 | MS.gene070638:CDS |
| CAGTTCTTGCAGAAATGACG+GGG | 0.628674 | 7.1:+84514884 | None:intergenic |
| TCTTCTTGGAGGAACTGAGT+CGG | 0.628714 | 7.1:+84514040 | None:intergenic |
| TACTGTATCCACCGAAAGGG+AGG | 0.629102 | 7.1:-84515065 | MS.gene070638:CDS |
| TTCATGAATACAGAACACAT+TGG | 0.634327 | 7.1:-84515191 | MS.gene070638:intron |
| ACCTCCACAAAGTCGACGGA+AGG | 0.636006 | 7.1:-84514521 | MS.gene070638:CDS |
| ACAAGAACATGAGATTGAGA+AGG | 0.637128 | 7.1:-84516693 | MS.gene070638:intron |
| AACATGCTAAAATCAAGCGA+AGG | 0.639475 | 7.1:-84514188 | MS.gene070638:CDS |
| TGAGGAAAGTAGCCACCTTG+TGG | 0.648868 | 7.1:+84514443 | None:intergenic |
| AGCGACCTAGACAATGCCGC+CGG | 0.655136 | 7.1:+84513942 | None:intergenic |
| CAGAGATATTGGACTGCCGG+TGG | 0.661022 | 7.1:-84514860 | MS.gene070638:CDS |
| CTTAGGTAAACATTCAAGGG+AGG | 0.664142 | 7.1:-84514213 | MS.gene070638:CDS |
| GGTTACCTCCACAAAGTCGA+CGG | 0.667234 | 7.1:-84514525 | MS.gene070638:CDS |
| TGGAACCATGAGAAACGTAC+CGG | 0.670283 | 7.1:-84514840 | MS.gene070638:CDS |
| GCACAACCATCATCACCGAA+TGG | 0.672816 | 7.1:-84514269 | MS.gene070638:CDS |
| TACCAGTGAAGAACAAGACG+AGG | 0.687861 | 7.1:-84514567 | MS.gene070638:CDS |
| CCTGATGGACAAAAGGCCGG+TGG | 0.706000 | 7.1:+84514365 | None:intergenic |
| ACCATGAGAAACGTACCGGT+AGG | 0.711808 | 7.1:-84514836 | MS.gene070638:CDS |
| CATAGCTTCCCACCACAAGG+TGG | 0.714183 | 7.1:-84514455 | MS.gene070638:CDS |
| AGTCTTGCAAGCCAATCCGG+CGG | 0.717524 | 7.1:-84513958 | MS.gene070638:CDS |
| AAATGCCAAGGAGTTCCATG+AGG | 0.739950 | 7.1:+84514425 | None:intergenic |
| GTGTCCATGCTACTACAACG+AGG | 0.808267 | 7.1:+84514944 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAATTTTGATTTTTTTTTTT+TGG | - | chr7.1:84514114-84514133 | MS.gene070638:CDS | 10.0% |
| !! | TTGTATTTGAATTACTTATT+TGG | - | chr7.1:84514470-84514489 | MS.gene070638:CDS | 15.0% |
| !!! | AATAATTTTTTCACTTTTCA+AGG | - | chr7.1:84514294-84514313 | MS.gene070638:CDS | 15.0% |
| !!! | GGTGAAATTTTATTTTTTTA+TGG | - | chr7.1:84514432-84514451 | MS.gene070638:CDS | 15.0% |
| !! | ATTCTTCCATTTCAAATAAA+GGG | + | chr7.1:84514167-84514186 | None:intergenic | 20.0% |
| !! | GAAATGGAAGAATATTTAAT+GGG | - | chr7.1:84514174-84514193 | MS.gene070638:CDS | 20.0% |
| !! | TATTCTTCCATTTCAAATAA+AGG | + | chr7.1:84514168-84514187 | None:intergenic | 20.0% |
| !! | TGAAATGGAAGAATATTTAA+TGG | - | chr7.1:84514173-84514192 | MS.gene070638:CDS | 20.0% |
| !! | TTAAACTACATGCTATAATT+TGG | + | chr7.1:84514388-84514407 | None:intergenic | 20.0% |
| !! | TTTATTGCGAAAAAAACATT+TGG | + | chr7.1:84515348-84515367 | None:intergenic | 20.0% |
| !!! | AAATCATGTTAGTTTATGTT+GGG | + | chr7.1:84514751-84514770 | None:intergenic | 20.0% |
| !!! | TAAATCATGTTAGTTTATGT+TGG | + | chr7.1:84514752-84514771 | None:intergenic | 20.0% |
| !!! | TATAATCAAAAGTTTTGTGA+GGG | - | chr7.1:84514515-84514534 | MS.gene070638:CDS | 20.0% |
| !!! | TTATAATCAAAAGTTTTGTG+AGG | - | chr7.1:84514514-84514533 | MS.gene070638:CDS | 20.0% |
| !!! | TTTGAAGTTATATTTGACTT+TGG | - | chr7.1:84514411-84514430 | MS.gene070638:CDS | 20.0% |
| !!! | TTTGACTTTTGAGTTTTATA+TGG | - | chr7.1:84514796-84514815 | MS.gene070638:CDS | 20.0% |
| ! | AAAAATGAAATTCATCGAAG+TGG | + | chr7.1:84515051-84515070 | None:intergenic | 25.0% |
| ! | AACAAAAGAACAGACAAATT+AGG | + | chr7.1:84514912-84514931 | None:intergenic | 25.0% |
| ! | CAGAACATCAATTACAAATA+AGG | + | chr7.1:84514954-84514973 | None:intergenic | 25.0% |
| !! | AAAGCTATTGAAAGTGATTT+TGG | - | chr7.1:84514622-84514641 | MS.gene070638:CDS | 25.0% |
| !! | ATTTTGGATTGTTTTCAATC+TGG | - | chr7.1:84514331-84514350 | MS.gene070638:CDS | 25.0% |
| !! | TTATGACCCTTTATTTGAAA+TGG | - | chr7.1:84514158-84514177 | MS.gene070638:CDS | 25.0% |
| !! | TTTTGGATTGTTTTCAATCT+GGG | - | chr7.1:84514332-84514351 | MS.gene070638:CDS | 25.0% |
| !!! | AAAATTCATTTGACTTGCTT+TGG | - | chr7.1:84514222-84514241 | MS.gene070638:CDS | 25.0% |
| !!! | AACAGTCGAATTTTAAAAAC+AGG | - | chr7.1:84514837-84514856 | MS.gene070638:CDS | 25.0% |
| !!! | TTTAAAATTCGACTGTTTTC+TGG | + | chr7.1:84514834-84514853 | None:intergenic | 25.0% |
| AACCTTAGGTAAACATTCAA+GGG | - | chr7.1:84516555-84516574 | MS.gene070638:intron | 30.0% | |
| AGAAATCTGCTCAAGATATT+AGG | + | chr7.1:84514863-84514882 | None:intergenic | 30.0% | |
| AGATAAGAACCTCAAAAAAC+CGG | - | chr7.1:84515787-84515806 | MS.gene070638:intron | 30.0% | |
| ATTCTATCCTGCAACTTATT+GGG | - | chr7.1:84516441-84516460 | MS.gene070638:intron | 30.0% | |
| CACAAACTGATACAAAAACA+AGG | - | chr7.1:84515216-84515235 | MS.gene070638:intron | 30.0% | |
| CCTATTTCAGAAATTCATGT+TGG | - | chr7.1:84513968-84513987 | MS.gene070638:CDS | 30.0% | |
| GATTCTTAACACATCCAAAT+TGG | - | chr7.1:84515160-84515179 | MS.gene070638:CDS | 30.0% | |
| GCACAGAAAACATAGATTAA+TGG | + | chr7.1:84515022-84515041 | None:intergenic | 30.0% | |
| GGATCAATCAAATAAATCGT+CGG | - | chr7.1:84516225-84516244 | MS.gene070638:intron | 30.0% | |
| GTGCAAAATTACACAAGAAA+TGG | - | chr7.1:84516142-84516161 | MS.gene070638:intron | 30.0% | |
| TCAACAGATAAGATCCAATT+TGG | + | chr7.1:84515177-84515196 | None:intergenic | 30.0% | |
| TCATGAATACAGAACACATT+GGG | - | chr7.1:84515581-84515600 | MS.gene070638:intron | 30.0% | |
| TGGTAATATATTTCCAGTCT+CGG | - | chr7.1:84515117-84515136 | MS.gene070638:CDS | 30.0% | |
| TTAGTTTATGTTGGGAATCA+TGG | + | chr7.1:84514743-84514762 | None:intergenic | 30.0% | |
| TTCATGAATACAGAACACAT+TGG | - | chr7.1:84515580-84515599 | MS.gene070638:intron | 30.0% | |
| TTCTAATTCTAGCATCAACA+AGG | + | chr7.1:84514604-84514623 | None:intergenic | 30.0% | |
| ! | TCATCAATCCTCAAAGTTTT+AGG | + | chr7.1:84516652-84516671 | None:intergenic | 30.0% |
| !! | AGGGAAGTTTTTGAGAAAAT+TGG | - | chr7.1:84514534-84514553 | MS.gene070638:CDS | 30.0% |
| !! | CCAACATGAATTTCTGAAAT+AGG | + | chr7.1:84513971-84513990 | None:intergenic | 30.0% |
| !! | GGAGTTTCAATGTTTGATTT+TGG | - | chr7.1:84514315-84514334 | MS.gene070638:CDS | 30.0% |
| !! | TCATTTTTACTCAATTCCCT+TGG | - | chr7.1:84515063-84515082 | MS.gene070638:CDS | 30.0% |
| !!! | GGATCAAACTTTTTTAGGAA+CGG | - | chr7.1:84515138-84515157 | MS.gene070638:CDS | 30.0% |
| AAAAAAGTTTGATCCGAGAC+TGG | + | chr7.1:84515133-84515152 | None:intergenic | 35.0% | |
| AACATGCTAAAATCAAGCGA+AGG | - | chr7.1:84516583-84516602 | MS.gene070638:intron | 35.0% | |
| AACGGTACAATCCTTACATT+TGG | - | chr7.1:84516061-84516080 | MS.gene070638:intron | 35.0% | |
| AAGCAGAAAAAAGCTCTTTC+TGG | - | chr7.1:84516680-84516699 | MS.gene070638:intron | 35.0% | |
| ACAAGAACATGAGATTGAGA+AGG | - | chr7.1:84514078-84514097 | MS.gene070638:CDS | 35.0% | |
| ACAAGTATGCTAGTGTTAGA+TGG | - | chr7.1:84515097-84515116 | MS.gene070638:CDS | 35.0% | |
| CAACCTTAGGTAAACATTCA+AGG | - | chr7.1:84516554-84516573 | MS.gene070638:intron | 35.0% | |
| CAATAAGTTGCAGGATAGAA+TGG | + | chr7.1:84516442-84516461 | None:intergenic | 35.0% | |
| CACATTGGGAGAAAAATTGT+CGG | - | chr7.1:84515595-84515614 | MS.gene070638:intron | 35.0% | |
| CATGAATGCATACTAAGCTT+TGG | - | chr7.1:84515555-84515574 | MS.gene070638:intron | 35.0% | |
| CATTAGCAGTAGACTCAATA+TGG | + | chr7.1:84515258-84515277 | None:intergenic | 35.0% | |
| CATTCTATCCTGCAACTTAT+TGG | - | chr7.1:84516440-84516459 | MS.gene070638:intron | 35.0% | |
| CTTCAACAAAATCACAGTCA+CGG | - | chr7.1:84514692-84514711 | MS.gene070638:CDS | 35.0% | |
| CTTGAATGTTTACCTAAGGT+TGG | + | chr7.1:84516556-84516575 | None:intergenic | 35.0% | |
| GAGAGTTTGTAGTAGAGTTA+TGG | + | chr7.1:84516534-84516553 | None:intergenic | 35.0% | |
| TATCTCAAGAACAAGCTATG+TGG | - | chr7.1:84516287-84516306 | MS.gene070638:intron | 35.0% | |
| TATCTGTTGATGTTTCCGAA+CGG | - | chr7.1:84515187-84515206 | MS.gene070638:intron | 35.0% | |
| TCGGATGAAAAGAATGAAGA+TGG | - | chr7.1:84515614-84515633 | MS.gene070638:intron | 35.0% | |
| TGAATCACATAAAGGTGAGT+TGG | + | chr7.1:84516089-84516108 | None:intergenic | 35.0% | |
| TGTGGTTTCCTAAAACTTTG+AGG | - | chr7.1:84516641-84516660 | MS.gene070638:intron | 35.0% | |
| TTCTATCCTGCAACTTATTG+GGG | - | chr7.1:84516442-84516461 | MS.gene070638:intron | 35.0% | |
| TTGTTCTTGAGATACATTGG+TGG | + | chr7.1:84516281-84516300 | None:intergenic | 35.0% | |
| ! | AGATTCTTCATCAGTTCTAG+AGG | + | chr7.1:84515684-84515703 | None:intergenic | 35.0% |
| ! | AGCTTGTTCTTGAGATACAT+TGG | + | chr7.1:84516284-84516303 | None:intergenic | 35.0% |
| ! | ATTCGACTGTTTTCTGGATT+TGG | + | chr7.1:84514828-84514847 | None:intergenic | 35.0% |
| ! | ATTCTTCTGTTGATTGTGCA+AGG | + | chr7.1:84515643-84515662 | None:intergenic | 35.0% |
| ! | CTATTTTGTCCGGTTTTTTG+AGG | + | chr7.1:84515799-84515818 | None:intergenic | 35.0% |
| ! | TTTTCTCGTCACACTTTGAA+GGG | + | chr7.1:84516771-84516790 | None:intergenic | 35.0% |
| ! | TTTTTCTCGTCACACTTTGA+AGG | + | chr7.1:84516772-84516791 | None:intergenic | 35.0% |
| !!! | GTCTCGGATCAAACTTTTTT+AGG | - | chr7.1:84515133-84515152 | MS.gene070638:CDS | 35.0% |
| AATGCCTGAAAGAGTCTTCT+TGG | + | chr7.1:84516748-84516767 | None:intergenic | 40.0% | |
| AATGGCATGGAAAATCCTGA+TGG | + | chr7.1:84516424-84516443 | None:intergenic | 40.0% | |
| ACTACAAACTCTCCAACCTT+AGG | - | chr7.1:84516541-84516560 | MS.gene070638:intron | 40.0% | |
| CAAGAACAAGCTATGTGGAA+TGG | - | chr7.1:84516292-84516311 | MS.gene070638:intron | 40.0% | |
| CAATGTAACAACCTCCCTTT+CGG | + | chr7.1:84515720-84515739 | None:intergenic | 40.0% | |
| CAGTTTGTGTAGAATCCGTT+CGG | + | chr7.1:84515205-84515224 | None:intergenic | 40.0% | |
| CTAAAATCAAGCGAAGGAGA+TGG | - | chr7.1:84516589-84516608 | MS.gene070638:intron | 40.0% | |
| CTCACCTTTATGTGATTCAG+TGG | - | chr7.1:84516090-84516109 | MS.gene070638:intron | 40.0% | |
| CTCCCTTGAATGTTTACCTA+AGG | + | chr7.1:84516560-84516579 | None:intergenic | 40.0% | |
| CTTAGGTAAACATTCAAGGG+AGG | - | chr7.1:84516558-84516577 | MS.gene070638:intron | 40.0% | |
| GATGCCACTGAATCACATAA+AGG | + | chr7.1:84516097-84516116 | None:intergenic | 40.0% | |
| GATTGTACCGTTGCATTTCA+AGG | + | chr7.1:84516053-84516072 | None:intergenic | 40.0% | |
| GTGTGACGAGAAAAATCACT+CGG | - | chr7.1:84516777-84516796 | MS.gene070638:CDS | 40.0% | |
| TACCGTTGCATTTCAAGGAA+GGG | + | chr7.1:84516048-84516067 | None:intergenic | 40.0% | |
| TGGTGACTTTCATGAAATCG+TGG | + | chr7.1:84514723-84514742 | None:intergenic | 40.0% | |
| TGTTACTGTATCCACCGAAA+GGG | - | chr7.1:84515703-84515722 | MS.gene070638:intron | 40.0% | |
| TTAGCGAAGAAAAGAGCTTG+TGG | - | chr7.1:84516623-84516642 | MS.gene070638:intron | 40.0% | |
| TTCAAAGACCGAAGAAGAAC+AGG | - | chr7.1:84515745-84515764 | MS.gene070638:intron | 40.0% | |
| TTTGTTGAAGCTCGAAAGTG+TGG | + | chr7.1:84514682-84514701 | None:intergenic | 40.0% | |
| ! | GAGTTATGGTTTGCACCATT+CGG | + | chr7.1:84516520-84516539 | None:intergenic | 40.0% |
| ! | GGAAAATCCTGATGGACAAA+AGG | + | chr7.1:84516416-84516435 | None:intergenic | 40.0% |
| ! | GGACAAGGAACTATTTTGTC+CGG | + | chr7.1:84515809-84515828 | None:intergenic | 40.0% |
| ! | GTGAGTTGGATCCAAATGTA+AGG | + | chr7.1:84516075-84516094 | None:intergenic | 40.0% |
| ! | TACTCAATTCCCTTGGTTTG+AGG | - | chr7.1:84515070-84515089 | MS.gene070638:CDS | 40.0% |
| ! | TTTGAGGATTGATGACTCTG+AGG | - | chr7.1:84516657-84516676 | MS.gene070638:intron | 40.0% |
| AAATGCCAAGGAGTTCCATG+AGG | + | chr7.1:84516349-84516368 | None:intergenic | 45.0% | |
| ACTTTCCTCATGGAACTCCT+TGG | - | chr7.1:84516341-84516360 | MS.gene070638:intron | 45.0% | |
| AGCTCTTTCTGGACAACACT+TGG | - | chr7.1:84516691-84516710 | MS.gene070638:intron | 45.0% | |
| AGTTGCAGGATAGAATGGCA+TGG | + | chr7.1:84516437-84516456 | None:intergenic | 45.0% | |
| ATCAGTGAGCTCGTTTGCAT+CGG | + | chr7.1:84516382-84516401 | None:intergenic | 45.0% | |
| ATGCTACTACAACGAGGACA+AGG | + | chr7.1:84515824-84515843 | None:intergenic | 45.0% | |
| CAAGTGCATGGAACATTCCA+CGG | - | chr7.1:84516476-84516495 | MS.gene070638:intron | 45.0% | |
| CACCCTTCCTTGAAATGCAA+CGG | - | chr7.1:84516043-84516062 | MS.gene070638:intron | 45.0% | |
| CAGTTCTTGCAGAAATGACG+GGG | + | chr7.1:84515890-84515909 | None:intergenic | 45.0% | |
| CTGTTACTGTATCCACCGAA+AGG | - | chr7.1:84515702-84515721 | MS.gene070638:intron | 45.0% | |
| GAACTCCTTGGCATTTACCA+TGG | - | chr7.1:84516353-84516372 | MS.gene070638:intron | 45.0% | |
| GAACTGAGAGCTACAAGAGT+TGG | + | chr7.1:84514570-84514589 | None:intergenic | 45.0% | |
| GACTCTGCGATCAAACTGTT+TGG | - | chr7.1:84513935-84513954 | MS.gene070638:CDS | 45.0% | |
| GCAAGAACTGCCAGAGATAT+TGG | - | chr7.1:84515900-84515919 | MS.gene070638:intron | 45.0% | |
| GCAGTTCTTGCAGAAATGAC+GGG | + | chr7.1:84515891-84515910 | None:intergenic | 45.0% | |
| GCTCTTTCTGGACAACACTT+GGG | - | chr7.1:84516692-84516711 | MS.gene070638:intron | 45.0% | |
| GGATTCCATGGTAAATGCCA+AGG | + | chr7.1:84516361-84516380 | None:intergenic | 45.0% | |
| GGCAGTTCTTGCAGAAATGA+CGG | + | chr7.1:84515892-84515911 | None:intergenic | 45.0% | |
| GTACCGTTGCATTTCAAGGA+AGG | + | chr7.1:84516049-84516068 | None:intergenic | 45.0% | |
| GTCTACTGCTAATGCTCTCA+TGG | - | chr7.1:84515264-84515283 | MS.gene070638:intron | 45.0% | |
| TACCAGTGAAGAACAAGACG+AGG | - | chr7.1:84516204-84516223 | MS.gene070638:intron | 45.0% | |
| TACGTTTCTCATGGTTCCAC+CGG | + | chr7.1:84515930-84515949 | None:intergenic | 45.0% | |
| TCCTCCAAGAAGACTCTTTC+AGG | - | chr7.1:84516741-84516760 | MS.gene070638:CDS | 45.0% | |
| TCTTCTTGGAGGAACTGAGT+CGG | + | chr7.1:84516734-84516753 | None:intergenic | 45.0% | |
| TCTTGTTCTTCACTGGTACG+AGG | + | chr7.1:84516202-84516221 | None:intergenic | 45.0% | |
| TGGAACCATGAGAAACGTAC+CGG | - | chr7.1:84515931-84515950 | MS.gene070638:intron | 45.0% | |
| TGTCTCGTCCTGTTCTTCTT+CGG | + | chr7.1:84515756-84515775 | None:intergenic | 45.0% | |
| TTCAGTCTTGCAAGCCAATC+CGG | - | chr7.1:84516810-84516829 | MS.gene070638:CDS | 45.0% | |
| TTGTCCTCGTTGTAGTAGCA+TGG | - | chr7.1:84515823-84515842 | MS.gene070638:intron | 45.0% | |
| ! | AATCCTGATGGACAAAAGGC+CGG | + | chr7.1:84516412-84516431 | None:intergenic | 45.0% |
| ! | ATCCTCGTCTTGTTCTTCAC+TGG | + | chr7.1:84516209-84516228 | None:intergenic | 45.0% |
| ! | CTTGTTGTGCCTCAAACCAA+GGG | + | chr7.1:84515082-84515101 | None:intergenic | 45.0% |
| ! | TTTGCACCATTCGGTGATGA+TGG | + | chr7.1:84516511-84516530 | None:intergenic | 45.0% |
| !! | ACTTGTTGTGCCTCAAACCA+AGG | + | chr7.1:84515083-84515102 | None:intergenic | 45.0% |
| !! | TCGCTTCTGAGACAGTTATC+TGG | + | chr7.1:84516003-84516022 | None:intergenic | 45.0% |
| !!! | GCTCTTGTTTTTTCTGCGAC+CGG | + | chr7.1:84515963-84515982 | None:intergenic | 45.0% |
| ACCTACCGGTACGTTTCTCA+TGG | + | chr7.1:84515939-84515958 | None:intergenic | 50.0% | |
| CGTGGAATGTTCCATGCACT+TGG | + | chr7.1:84516478-84516497 | None:intergenic | 50.0% | |
| CTCGTTTGCATCGGATTCCA+TGG | + | chr7.1:84516373-84516392 | None:intergenic | 50.0% | |
| GAAAGTAGCCACCTTGTGGT+GGG | + | chr7.1:84516327-84516346 | None:intergenic | 50.0% | |
| GCACAACCATCATCACCGAA+TGG | - | chr7.1:84516502-84516521 | MS.gene070638:intron | 50.0% | |
| GCAGTACTATGCCAAGTGCA+TGG | - | chr7.1:84516464-84516483 | MS.gene070638:intron | 50.0% | |
| GCCTGAAAGAGTCTTCTTGG+AGG | + | chr7.1:84516745-84516764 | None:intergenic | 50.0% | |
| GGTTACCTCCACAAAGTCGA+CGG | - | chr7.1:84516246-84516265 | MS.gene070638:intron | 50.0% | |
| GTACTGCCCCAATAAGTTGC+AGG | + | chr7.1:84516451-84516470 | None:intergenic | 50.0% | |
| GTGTCCATGCTACTACAACG+AGG | + | chr7.1:84515830-84515849 | None:intergenic | 50.0% | |
| TACTGTATCCACCGAAAGGG+AGG | - | chr7.1:84515706-84515725 | MS.gene070638:intron | 50.0% | |
| TCTAGAGGCTGCATCTGGAT+TGG | + | chr7.1:84515669-84515688 | None:intergenic | 50.0% | |
| TGAGGAAAGTAGCCACCTTG+TGG | + | chr7.1:84516331-84516350 | None:intergenic | 50.0% | |
| TGCCAGAGATATTGGACTGC+CGG | - | chr7.1:84515908-84515927 | MS.gene070638:intron | 50.0% | |
| TGTAACAACCTCCCTTTCGG+TGG | + | chr7.1:84515717-84515736 | None:intergenic | 50.0% | |
| ! | ACCATGAGAAACGTACCGGT+AGG | - | chr7.1:84515935-84515954 | MS.gene070638:intron | 50.0% |
| ! | CAAGGTGGCTACTTTCCTCA+TGG | - | chr7.1:84516331-84516350 | MS.gene070638:intron | 50.0% |
| ! | TCTTGCAGAAATGACGGGGT+TGG | + | chr7.1:84515886-84515905 | None:intergenic | 50.0% |
| !! | TCAGTTCTAGAGGCTGCATC+TGG | + | chr7.1:84515674-84515693 | None:intergenic | 50.0% |
| ACCTCCACAAAGTCGACGGA+AGG | - | chr7.1:84516250-84516269 | MS.gene070638:intron | 55.0% | |
| AGTCTTGCAAGCCAATCCGG+CGG | - | chr7.1:84516813-84516832 | MS.gene070638:CDS | 55.0% | |
| CACCGGCAGTCCAATATCTC+TGG | + | chr7.1:84515913-84515932 | None:intergenic | 55.0% | |
| CAGAGATATTGGACTGCCGG+TGG | - | chr7.1:84515911-84515930 | MS.gene070638:intron | 55.0% | |
| CATAGCTTCCCACCACAAGG+TGG | - | chr7.1:84516316-84516335 | MS.gene070638:intron | 55.0% | |
| GGAAAGTAGCCACCTTGTGG+TGG | + | chr7.1:84516328-84516347 | None:intergenic | 55.0% | |
| ! | AGAAACGTACCGGTAGGTGC+CGG | - | chr7.1:84515941-84515960 | MS.gene070638:intron | 55.0% |
| ! | CACCTTGTGGTGGGAAGCTA+TGG | + | chr7.1:84516318-84516337 | None:intergenic | 55.0% |
| ! | GATGATGGTTGTGCTTGCCG+TGG | + | chr7.1:84516496-84516515 | None:intergenic | 55.0% |
| !! | ACCTTCCGTCGACTTTGTGG+AGG | + | chr7.1:84516254-84516273 | None:intergenic | 55.0% |
| !! | GAGCTCACTGATTCCACCAC+CGG | - | chr7.1:84516390-84516409 | MS.gene070638:intron | 55.0% |
| !! | TGCACCTTCCGTCGACTTTG+TGG | + | chr7.1:84516257-84516276 | None:intergenic | 55.0% |
| AGCGACCTAGACAATGCCGC+CGG | + | chr7.1:84516832-84516851 | None:intergenic | 60.0% | |
| CCAATCCGGCGGCATTGTCT+AGG | - | chr7.1:84516824-84516843 | MS.gene070638:CDS | 60.0% | |
| CCTAGACAATGCCGCCGGAT+TGG | + | chr7.1:84516827-84516846 | None:intergenic | 60.0% | |
| GATGGACAAAAGGCCGGTGG+TGG | + | chr7.1:84516406-84516425 | None:intergenic | 60.0% | |
| GGCCATAGCTTCCCACCACA+AGG | - | chr7.1:84516313-84516332 | MS.gene070638:intron | 60.0% | |
| TTTCTGCGACCGGCACCTAC+CGG | + | chr7.1:84515953-84515972 | None:intergenic | 60.0% | |
| ! | CCACCGGCCTTTTGTCCATC+AGG | - | chr7.1:84516406-84516425 | MS.gene070638:intron | 60.0% |
| ! | CCTGATGGACAAAAGGCCGG+TGG | + | chr7.1:84516409-84516428 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 84513920 | 84516873 | 84513920 | ID=MS.gene070638 |
| chr7.1 | mRNA | 84513920 | 84516873 | 84513920 | ID=MS.gene070638.t1;Parent=MS.gene070638 |
| chr7.1 | exon | 84516694 | 84516873 | 84516694 | ID=MS.gene070638.t1.exon1;Parent=MS.gene070638.t1 |
| chr7.1 | CDS | 84516694 | 84516873 | 84516694 | ID=cds.MS.gene070638.t1;Parent=MS.gene070638.t1 |
| chr7.1 | exon | 84513920 | 84515200 | 84513920 | ID=MS.gene070638.t1.exon2;Parent=MS.gene070638.t1 |
| chr7.1 | CDS | 84513920 | 84515200 | 84513920 | ID=cds.MS.gene070638.t1;Parent=MS.gene070638.t1 |
| Gene Sequence |
| Protein sequence |