Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070916.t1 | AES97501.2 | 74.8 | 282 | 41 | 5 | 1 | 280 | 1 | 254 | 6.70E-108 | 400.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070916.t1 | B8B3I4 | 40.3 | 258 | 116 | 5 | 6 | 226 | 18 | 274 | 2.5e-42 | 174.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070916.t1 | G7JZF6 | 74.8 | 282 | 41 | 5 | 1 | 280 | 1 | 254 | 4.8e-108 | 400.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene070916.t1 | TF | GARP-ARR-B |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070916.t1 | MTR_5g055260 | 74.823 | 282 | 41 | 5 | 1 | 280 | 1 | 254 | 4.07e-140 | 396 |
| MS.gene070916.t1 | MTR_4g021790 | 74.144 | 263 | 67 | 1 | 1 | 263 | 1 | 262 | 9.38e-139 | 393 |
| MS.gene070916.t1 | MTR_4g021855 | 63.576 | 302 | 100 | 2 | 1 | 293 | 1 | 301 | 6.87e-131 | 374 |
| MS.gene070916.t1 | MTR_4g021760 | 61.921 | 302 | 112 | 3 | 1 | 300 | 1 | 301 | 4.96e-127 | 365 |
| MS.gene070916.t1 | MTR_4g021845 | 70.642 | 218 | 63 | 1 | 1 | 218 | 1 | 217 | 8.88e-109 | 315 |
| MS.gene070916.t1 | MTR_1g032570 | 46.586 | 249 | 99 | 4 | 10 | 226 | 11 | 257 | 1.73e-65 | 217 |
| MS.gene070916.t1 | MTR_4g023980 | 64.493 | 138 | 48 | 1 | 55 | 192 | 35 | 171 | 5.89e-60 | 189 |
| MS.gene070916.t1 | MTR_2g034960 | 44.398 | 241 | 109 | 3 | 10 | 226 | 29 | 268 | 1.18e-58 | 198 |
| MS.gene070916.t1 | MTR_4g121020 | 44.672 | 244 | 106 | 5 | 10 | 226 | 31 | 272 | 1.14e-56 | 194 |
| MS.gene070916.t1 | MTR_4g121020 | 44.672 | 244 | 106 | 5 | 10 | 226 | 31 | 272 | 1.16e-56 | 194 |
| MS.gene070916.t1 | MTR_3g086100 | 40.408 | 245 | 117 | 5 | 10 | 226 | 13 | 256 | 2.11e-52 | 181 |
| MS.gene070916.t1 | MTR_8g105600 | 40.562 | 249 | 128 | 2 | 1 | 230 | 1 | 248 | 1.31e-50 | 176 |
| MS.gene070916.t1 | MTR_6g045327 | 43.529 | 255 | 111 | 7 | 1 | 237 | 1 | 240 | 3.15e-50 | 171 |
| MS.gene070916.t1 | MTR_3g106220 | 40.964 | 249 | 114 | 5 | 10 | 226 | 8 | 255 | 6.83e-50 | 175 |
| MS.gene070916.t1 | MTR_4g131600 | 40.426 | 235 | 116 | 4 | 10 | 221 | 20 | 253 | 2.99e-49 | 173 |
| MS.gene070916.t1 | MTR_8g079940 | 37.705 | 244 | 125 | 4 | 9 | 226 | 24 | 266 | 2.55e-48 | 169 |
| MS.gene070916.t1 | MTR_1g013170 | 38.956 | 249 | 121 | 5 | 7 | 226 | 2 | 248 | 4.50e-48 | 168 |
| MS.gene070916.t1 | MTR_2g450070 | 35.686 | 255 | 126 | 5 | 10 | 227 | 18 | 271 | 2.83e-45 | 163 |
| MS.gene070916.t1 | MTR_7g117705 | 36.290 | 248 | 127 | 5 | 7 | 225 | 2 | 247 | 3.64e-45 | 159 |
| MS.gene070916.t1 | MTR_2g450070 | 35.686 | 255 | 126 | 5 | 10 | 227 | 18 | 271 | 3.85e-45 | 163 |
| MS.gene070916.t1 | MTR_1g013180 | 38.431 | 255 | 126 | 6 | 1 | 226 | 147 | 399 | 1.15e-44 | 161 |
| MS.gene070916.t1 | MTR_4g131580 | 37.500 | 248 | 129 | 4 | 10 | 232 | 17 | 263 | 2.24e-44 | 160 |
| MS.gene070916.t1 | MTR_4g131570 | 38.367 | 245 | 122 | 5 | 10 | 226 | 17 | 260 | 3.92e-44 | 159 |
| MS.gene070916.t1 | MTR_8g093040 | 43.049 | 223 | 107 | 7 | 10 | 230 | 14 | 218 | 3.77e-42 | 147 |
| MS.gene070916.t1 | MTR_3g102590 | 36.364 | 220 | 112 | 4 | 10 | 226 | 8 | 202 | 2.66e-41 | 144 |
| MS.gene070916.t1 | MTR_1g032570 | 42.632 | 190 | 76 | 3 | 68 | 226 | 1 | 188 | 1.57e-39 | 146 |
| MS.gene070916.t1 | MTR_6g016850 | 43.478 | 161 | 89 | 2 | 1 | 160 | 1 | 160 | 3.58e-39 | 136 |
| MS.gene070916.t1 | MTR_3g102590 | 35.714 | 210 | 109 | 3 | 10 | 218 | 8 | 192 | 2.06e-38 | 135 |
| MS.gene070916.t1 | MTR_3g102600 | 35.780 | 218 | 103 | 3 | 10 | 226 | 8 | 189 | 2.23e-38 | 135 |
| MS.gene070916.t1 | MTR_3g102600 | 33.962 | 212 | 103 | 3 | 10 | 220 | 8 | 183 | 2.42e-34 | 124 |
| MS.gene070916.t1 | MTR_3g086100 | 38.172 | 186 | 87 | 4 | 68 | 226 | 1 | 185 | 9.06e-32 | 124 |
| MS.gene070916.t1 | MTR_3g102600 | 34.857 | 175 | 78 | 2 | 52 | 226 | 2 | 140 | 1.76e-29 | 111 |
| MS.gene070916.t1 | MTR_7g026400 | 35.849 | 212 | 99 | 7 | 45 | 231 | 19 | 218 | 1.29e-28 | 115 |
| MS.gene070916.t1 | MTR_0450s0040 | 31.878 | 229 | 139 | 5 | 14 | 231 | 8 | 230 | 4.05e-27 | 108 |
| MS.gene070916.t1 | MTR_4g121020 | 43.030 | 165 | 66 | 4 | 88 | 226 | 6 | 168 | 6.04e-27 | 110 |
| MS.gene070916.t1 | MTR_3g102600 | 32.544 | 169 | 78 | 2 | 52 | 220 | 2 | 134 | 2.86e-25 | 99.0 |
| MS.gene070916.t1 | MTR_7g098250 | 49.367 | 79 | 39 | 1 | 160 | 237 | 253 | 331 | 2.57e-16 | 79.7 |
| MS.gene070916.t1 | MTR_5g041350 | 60.345 | 58 | 22 | 1 | 165 | 221 | 11 | 68 | 7.53e-16 | 77.4 |
| MS.gene070916.t1 | MTR_2g086450 | 41.748 | 103 | 49 | 3 | 125 | 221 | 1 | 98 | 9.98e-16 | 77.4 |
| MS.gene070916.t1 | MTR_2g016220 | 37.190 | 121 | 69 | 3 | 154 | 268 | 69 | 188 | 2.02e-15 | 76.3 |
| MS.gene070916.t1 | MTR_4g064730 | 50.685 | 73 | 35 | 1 | 155 | 226 | 116 | 188 | 2.31e-15 | 75.9 |
| MS.gene070916.t1 | MTR_1g013160 | 30.000 | 150 | 75 | 4 | 71 | 192 | 1 | 148 | 2.51e-15 | 72.8 |
| MS.gene070916.t1 | MTR_2g016220 | 37.190 | 121 | 69 | 3 | 154 | 268 | 69 | 188 | 2.82e-15 | 75.9 |
| MS.gene070916.t1 | MTR_6g032990 | 56.061 | 66 | 26 | 2 | 165 | 229 | 38 | 101 | 2.83e-15 | 76.3 |
| MS.gene070916.t1 | MTR_7g089010 | 59.322 | 59 | 24 | 0 | 168 | 226 | 90 | 148 | 3.26e-15 | 75.1 |
| MS.gene070916.t1 | MTR_7g115530 | 51.429 | 70 | 33 | 1 | 169 | 237 | 218 | 287 | 4.35e-15 | 74.7 |
| MS.gene070916.t1 | MTR_7g115530 | 51.429 | 70 | 33 | 1 | 169 | 237 | 218 | 287 | 7.38e-15 | 74.3 |
| MS.gene070916.t1 | MTR_1g080330 | 45.977 | 87 | 44 | 2 | 165 | 250 | 171 | 255 | 8.53e-15 | 73.6 |
| MS.gene070916.t1 | MTR_7g115530 | 51.429 | 70 | 33 | 1 | 169 | 237 | 218 | 287 | 1.02e-14 | 74.7 |
| MS.gene070916.t1 | MTR_1g080330 | 48.193 | 83 | 40 | 2 | 169 | 250 | 175 | 255 | 1.75e-14 | 73.6 |
| MS.gene070916.t1 | MTR_2g016220 | 36.800 | 125 | 68 | 5 | 154 | 268 | 69 | 192 | 1.81e-14 | 73.6 |
| MS.gene070916.t1 | MTR_3g450310 | 49.351 | 77 | 32 | 2 | 159 | 228 | 3 | 79 | 2.78e-14 | 70.9 |
| MS.gene070916.t1 | MTR_7g115530 | 62.963 | 54 | 19 | 1 | 169 | 221 | 218 | 271 | 3.13e-14 | 72.8 |
| MS.gene070916.t1 | MTR_0223s0040 | 54.386 | 57 | 25 | 1 | 167 | 222 | 16 | 72 | 1.04e-13 | 70.5 |
| MS.gene070916.t1 | MTR_7g069660 | 55.357 | 56 | 24 | 1 | 167 | 221 | 69 | 124 | 1.09e-13 | 71.2 |
| MS.gene070916.t1 | MTR_4g081710 | 55.172 | 58 | 25 | 1 | 165 | 221 | 13 | 70 | 4.45e-13 | 69.3 |
| MS.gene070916.t1 | MTR_2g023580 | 54.386 | 57 | 25 | 1 | 167 | 222 | 53 | 109 | 5.01e-13 | 67.8 |
| MS.gene070916.t1 | MTR_7g115530 | 61.538 | 52 | 19 | 1 | 169 | 219 | 218 | 269 | 8.72e-13 | 67.8 |
| MS.gene070916.t1 | MTR_8g086410 | 53.571 | 56 | 25 | 1 | 167 | 221 | 109 | 164 | 9.00e-13 | 68.9 |
| MS.gene070916.t1 | MTR_8g086410 | 53.571 | 56 | 25 | 1 | 167 | 221 | 107 | 162 | 9.12e-13 | 68.9 |
| MS.gene070916.t1 | MTR_2g090675 | 41.250 | 80 | 47 | 0 | 146 | 225 | 138 | 217 | 9.77e-13 | 68.6 |
| MS.gene070916.t1 | MTR_7g088070 | 36.765 | 136 | 74 | 4 | 112 | 244 | 2 | 128 | 1.09e-12 | 67.4 |
| MS.gene070916.t1 | MTR_6g444980 | 51.515 | 66 | 31 | 1 | 157 | 221 | 23 | 88 | 1.23e-12 | 68.2 |
| MS.gene070916.t1 | MTR_6g444980 | 51.515 | 66 | 31 | 1 | 157 | 221 | 23 | 88 | 1.37e-12 | 67.8 |
| MS.gene070916.t1 | MTR_1g112370 | 52.632 | 57 | 26 | 1 | 167 | 222 | 20 | 76 | 1.52e-12 | 67.8 |
| MS.gene070916.t1 | MTR_1g090670 | 59.259 | 54 | 21 | 1 | 169 | 221 | 44 | 97 | 1.68e-12 | 67.0 |
| MS.gene070916.t1 | MTR_2g027800 | 36.585 | 123 | 69 | 4 | 169 | 282 | 39 | 161 | 1.93e-12 | 67.0 |
| MS.gene070916.t1 | MTR_8g086410 | 46.377 | 69 | 32 | 2 | 167 | 230 | 109 | 177 | 2.36e-12 | 67.4 |
| MS.gene070916.t1 | MTR_7g088070 | 38.211 | 123 | 64 | 4 | 112 | 231 | 2 | 115 | 2.40e-12 | 66.6 |
| MS.gene070916.t1 | MTR_4g098870 | 49.315 | 73 | 36 | 1 | 164 | 236 | 325 | 396 | 2.55e-12 | 67.8 |
| MS.gene070916.t1 | MTR_4g098870 | 49.315 | 73 | 36 | 1 | 164 | 236 | 305 | 376 | 2.60e-12 | 67.8 |
| MS.gene070916.t1 | MTR_4g098870 | 46.341 | 82 | 43 | 1 | 164 | 245 | 344 | 424 | 3.34e-12 | 67.4 |
| MS.gene070916.t1 | MTR_4g098870 | 49.315 | 73 | 36 | 1 | 164 | 236 | 325 | 396 | 3.43e-12 | 67.4 |
| MS.gene070916.t1 | MTR_4g098870 | 46.341 | 82 | 43 | 1 | 164 | 245 | 305 | 385 | 3.49e-12 | 67.4 |
| MS.gene070916.t1 | MTR_7g093030 | 53.571 | 56 | 25 | 1 | 167 | 221 | 210 | 265 | 3.62e-12 | 66.2 |
| MS.gene070916.t1 | MTR_7g093030 | 53.571 | 56 | 25 | 1 | 167 | 221 | 210 | 265 | 4.02e-12 | 66.6 |
| MS.gene070916.t1 | MTR_4g078810 | 51.724 | 58 | 28 | 0 | 168 | 225 | 157 | 214 | 5.01e-12 | 66.6 |
| MS.gene070916.t1 | MTR_7g115530 | 60.784 | 51 | 19 | 1 | 169 | 218 | 218 | 268 | 5.19e-12 | 65.9 |
| MS.gene070916.t1 | MTR_2g027860 | 46.067 | 89 | 38 | 3 | 169 | 247 | 49 | 137 | 5.58e-12 | 65.9 |
| MS.gene070916.t1 | MTR_2g027800 | 57.407 | 54 | 22 | 1 | 169 | 221 | 39 | 92 | 5.79e-12 | 65.9 |
| MS.gene070916.t1 | MTR_1g053835 | 44.444 | 81 | 40 | 3 | 160 | 239 | 251 | 327 | 6.64e-12 | 66.2 |
| MS.gene070916.t1 | MTR_2g084230 | 50.877 | 57 | 27 | 1 | 167 | 222 | 95 | 151 | 7.21e-12 | 65.9 |
| MS.gene070916.t1 | MTR_2g084230 | 50.877 | 57 | 27 | 1 | 167 | 222 | 95 | 151 | 7.24e-12 | 65.5 |
| MS.gene070916.t1 | MTR_1g053800 | 57.895 | 57 | 23 | 1 | 169 | 224 | 177 | 233 | 1.01e-11 | 65.1 |
| MS.gene070916.t1 | MTR_5g014040 | 46.479 | 71 | 38 | 0 | 158 | 228 | 300 | 370 | 1.27e-11 | 65.5 |
| MS.gene070916.t1 | MTR_5g014040 | 29.921 | 127 | 83 | 4 | 10 | 134 | 14 | 136 | 6.08e-11 | 63.5 |
| MS.gene070916.t1 | MTR_5g027440 | 55.556 | 54 | 23 | 1 | 169 | 221 | 25 | 78 | 1.46e-11 | 64.3 |
| MS.gene070916.t1 | MTR_5g017980 | 50.820 | 61 | 30 | 0 | 166 | 226 | 190 | 250 | 3.90e-11 | 63.5 |
| MS.gene070916.t1 | MTR_5g017980 | 50.820 | 61 | 30 | 0 | 166 | 226 | 189 | 249 | 3.99e-11 | 63.5 |
| MS.gene070916.t1 | MTR_5g014040 | 29.921 | 127 | 83 | 4 | 10 | 134 | 14 | 136 | 5.43e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070916.t1 | AT3G16857 | 40.684 | 263 | 109 | 4 | 10 | 226 | 33 | 294 | 6.78e-56 | 192 |
| MS.gene070916.t1 | AT3G16857 | 40.684 | 263 | 109 | 4 | 10 | 226 | 33 | 294 | 7.53e-56 | 192 |
| MS.gene070916.t1 | AT2G01760 | 41.569 | 255 | 113 | 5 | 7 | 226 | 4 | 257 | 1.11e-53 | 180 |
| MS.gene070916.t1 | AT1G67710 | 39.623 | 265 | 128 | 6 | 11 | 244 | 8 | 271 | 3.75e-50 | 174 |
| MS.gene070916.t1 | AT2G01760 | 37.456 | 283 | 113 | 6 | 7 | 226 | 4 | 285 | 1.10e-47 | 165 |
| MS.gene070916.t1 | AT2G25180 | 39.419 | 241 | 121 | 4 | 10 | 226 | 13 | 252 | 1.49e-46 | 166 |
| MS.gene070916.t1 | AT4G31920 | 38.889 | 234 | 128 | 5 | 10 | 230 | 13 | 244 | 1.11e-43 | 157 |
| MS.gene070916.t1 | AT5G58080 | 39.024 | 246 | 124 | 5 | 10 | 232 | 14 | 256 | 3.69e-43 | 157 |
| MS.gene070916.t1 | AT3G16857 | 39.286 | 224 | 89 | 4 | 49 | 226 | 2 | 224 | 9.78e-42 | 153 |
| MS.gene070916.t1 | AT3G62670 | 35.714 | 224 | 120 | 7 | 27 | 227 | 52 | 274 | 8.33e-34 | 128 |
| MS.gene070916.t1 | AT2G01760 | 38.860 | 193 | 83 | 4 | 68 | 226 | 1 | 192 | 7.65e-32 | 121 |
| MS.gene070916.t1 | AT1G49190 | 32.114 | 246 | 129 | 7 | 10 | 221 | 30 | 271 | 1.36e-30 | 119 |
| MS.gene070916.t1 | AT5G49240 | 31.646 | 237 | 134 | 5 | 9 | 218 | 37 | 272 | 8.11e-30 | 115 |
| MS.gene070916.t1 | AT1G67710 | 37.681 | 207 | 98 | 5 | 68 | 244 | 1 | 206 | 1.41e-29 | 117 |
| MS.gene070916.t1 | AT5G07210 | 27.306 | 271 | 140 | 6 | 14 | 230 | 16 | 283 | 6.13e-23 | 99.4 |
| MS.gene070916.t1 | AT1G67710 | 36.898 | 187 | 87 | 5 | 88 | 244 | 12 | 197 | 5.74e-21 | 93.2 |
| MS.gene070916.t1 | AT5G07210 | 26.523 | 279 | 140 | 7 | 14 | 230 | 16 | 291 | 2.08e-20 | 92.0 |
| MS.gene070916.t1 | AT1G49190 | 35.714 | 126 | 79 | 2 | 10 | 134 | 30 | 154 | 6.62e-18 | 84.7 |
| MS.gene070916.t1 | AT2G27070 | 25.753 | 299 | 158 | 9 | 1 | 242 | 3 | 294 | 1.67e-16 | 80.5 |
| MS.gene070916.t1 | AT5G59570 | 50.685 | 73 | 33 | 1 | 157 | 226 | 126 | 198 | 2.38e-16 | 78.6 |
| MS.gene070916.t1 | AT5G59570 | 50.685 | 73 | 33 | 1 | 157 | 226 | 126 | 198 | 2.38e-16 | 78.6 |
| MS.gene070916.t1 | AT2G40970 | 52.239 | 67 | 32 | 0 | 160 | 226 | 96 | 162 | 7.73e-16 | 76.3 |
| MS.gene070916.t1 | AT5G05090 | 52.857 | 70 | 32 | 1 | 158 | 226 | 69 | 138 | 1.08e-15 | 75.9 |
| MS.gene070916.t1 | AT3G46640 | 50.685 | 73 | 33 | 1 | 157 | 226 | 129 | 201 | 1.11e-15 | 76.6 |
| MS.gene070916.t1 | AT3G04030 | 57.812 | 64 | 26 | 1 | 159 | 221 | 35 | 98 | 1.41e-15 | 77.0 |
| MS.gene070916.t1 | AT3G46640 | 50.685 | 73 | 33 | 1 | 157 | 226 | 129 | 201 | 1.46e-15 | 76.3 |
| MS.gene070916.t1 | AT3G46640 | 50.685 | 73 | 33 | 1 | 157 | 226 | 129 | 201 | 1.46e-15 | 76.3 |
| MS.gene070916.t1 | AT3G04030 | 57.812 | 64 | 26 | 1 | 159 | 221 | 35 | 98 | 1.53e-15 | 77.0 |
| MS.gene070916.t1 | AT2G01060 | 52.941 | 85 | 36 | 3 | 158 | 238 | 4 | 88 | 1.56e-15 | 75.9 |
| MS.gene070916.t1 | AT1G68210 | 25.092 | 271 | 143 | 8 | 8 | 221 | 7 | 274 | 1.84e-15 | 77.4 |
| MS.gene070916.t1 | AT3G10760 | 59.322 | 59 | 24 | 0 | 168 | 226 | 104 | 162 | 2.23e-15 | 75.9 |
| MS.gene070916.t1 | AT5G18240 | 57.812 | 64 | 26 | 1 | 159 | 221 | 35 | 98 | 3.91e-15 | 75.9 |
| MS.gene070916.t1 | AT5G18240 | 57.812 | 64 | 26 | 1 | 159 | 221 | 35 | 98 | 3.91e-15 | 75.9 |
| MS.gene070916.t1 | AT5G18240 | 57.812 | 64 | 26 | 1 | 159 | 221 | 35 | 98 | 4.13e-15 | 75.9 |
| MS.gene070916.t1 | AT5G18240 | 57.812 | 64 | 26 | 1 | 159 | 221 | 35 | 98 | 4.13e-15 | 75.9 |
| MS.gene070916.t1 | AT5G18240 | 57.812 | 64 | 26 | 1 | 159 | 221 | 35 | 98 | 4.21e-15 | 75.9 |
| MS.gene070916.t1 | AT3G04030 | 53.968 | 63 | 29 | 0 | 159 | 221 | 35 | 97 | 1.57e-14 | 73.9 |
| MS.gene070916.t1 | AT4G04605 | 45.455 | 77 | 40 | 2 | 167 | 241 | 12 | 88 | 2.37e-14 | 71.2 |
| MS.gene070916.t1 | AT4G13640 | 41.346 | 104 | 51 | 3 | 169 | 268 | 37 | 134 | 3.52e-14 | 72.0 |
| MS.gene070916.t1 | AT4G13640 | 41.346 | 104 | 51 | 3 | 169 | 268 | 37 | 134 | 3.92e-14 | 72.0 |
| MS.gene070916.t1 | AT5G06800 | 40.323 | 124 | 62 | 5 | 169 | 284 | 192 | 311 | 5.74e-14 | 72.0 |
| MS.gene070916.t1 | AT5G44190 | 56.897 | 58 | 25 | 0 | 168 | 225 | 146 | 203 | 7.96e-14 | 72.0 |
| MS.gene070916.t1 | AT5G44190 | 56.897 | 58 | 25 | 0 | 168 | 225 | 146 | 203 | 9.56e-14 | 71.2 |
| MS.gene070916.t1 | AT3G24120 | 39.583 | 96 | 50 | 2 | 169 | 256 | 41 | 136 | 1.34e-13 | 70.5 |
| MS.gene070916.t1 | AT3G24120 | 39.583 | 96 | 50 | 2 | 169 | 256 | 41 | 136 | 1.38e-13 | 70.5 |
| MS.gene070916.t1 | AT5G06800 | 39.535 | 129 | 61 | 5 | 169 | 284 | 192 | 316 | 1.56e-13 | 70.9 |
| MS.gene070916.t1 | AT2G20570 | 47.500 | 80 | 36 | 1 | 152 | 225 | 130 | 209 | 2.92e-13 | 70.5 |
| MS.gene070916.t1 | AT2G40260 | 57.895 | 57 | 23 | 1 | 167 | 222 | 80 | 136 | 3.26e-13 | 70.1 |
| MS.gene070916.t1 | AT1G69580 | 37.302 | 126 | 68 | 5 | 165 | 284 | 30 | 150 | 3.98e-13 | 69.3 |
| MS.gene070916.t1 | AT1G14600 | 60.377 | 53 | 20 | 1 | 170 | 221 | 24 | 76 | 4.55e-13 | 68.6 |
| MS.gene070916.t1 | AT5G29000 | 37.615 | 109 | 60 | 2 | 129 | 236 | 198 | 299 | 6.62e-13 | 68.6 |
| MS.gene070916.t1 | AT2G20570 | 58.182 | 55 | 23 | 0 | 171 | 225 | 171 | 225 | 8.21e-13 | 68.9 |
| MS.gene070916.t1 | AT5G29000 | 36.607 | 112 | 63 | 2 | 129 | 239 | 155 | 259 | 1.19e-12 | 68.2 |
| MS.gene070916.t1 | AT5G29000 | 36.607 | 112 | 63 | 2 | 129 | 239 | 155 | 259 | 1.19e-12 | 68.2 |
| MS.gene070916.t1 | AT1G69580 | 39.252 | 107 | 58 | 4 | 165 | 269 | 30 | 131 | 1.20e-12 | 68.2 |
| MS.gene070916.t1 | AT5G29000 | 36.607 | 112 | 63 | 2 | 129 | 239 | 198 | 302 | 1.23e-12 | 68.6 |
| MS.gene070916.t1 | AT1G79430 | 43.299 | 97 | 51 | 3 | 157 | 252 | 22 | 115 | 1.29e-12 | 68.2 |
| MS.gene070916.t1 | AT4G28610 | 47.297 | 74 | 37 | 2 | 169 | 241 | 225 | 297 | 1.36e-12 | 68.2 |
| MS.gene070916.t1 | AT5G06800 | 53.968 | 63 | 27 | 2 | 161 | 221 | 183 | 245 | 1.90e-12 | 67.0 |
| MS.gene070916.t1 | AT3G13040 | 37.607 | 117 | 63 | 5 | 168 | 281 | 240 | 349 | 2.21e-12 | 67.8 |
| MS.gene070916.t1 | AT3G13040 | 37.607 | 117 | 63 | 5 | 168 | 281 | 240 | 349 | 2.21e-12 | 67.8 |
| MS.gene070916.t1 | AT3G13040 | 37.607 | 117 | 63 | 5 | 168 | 281 | 240 | 349 | 2.21e-12 | 67.8 |
| MS.gene070916.t1 | AT2G20400 | 41.304 | 92 | 51 | 2 | 169 | 259 | 231 | 320 | 2.62e-12 | 67.4 |
| MS.gene070916.t1 | AT2G02060 | 50.000 | 62 | 30 | 1 | 170 | 230 | 30 | 91 | 2.85e-12 | 66.2 |
| MS.gene070916.t1 | AT2G02060 | 50.000 | 62 | 30 | 1 | 170 | 230 | 30 | 91 | 2.85e-12 | 66.2 |
| MS.gene070916.t1 | AT2G42660 | 53.704 | 54 | 24 | 1 | 170 | 222 | 51 | 104 | 3.13e-12 | 65.9 |
| MS.gene070916.t1 | AT2G20400 | 59.259 | 54 | 21 | 1 | 169 | 221 | 231 | 284 | 3.16e-12 | 67.0 |
| MS.gene070916.t1 | AT2G38300 | 50.877 | 57 | 27 | 1 | 167 | 222 | 52 | 108 | 3.31e-12 | 66.6 |
| MS.gene070916.t1 | AT3G12730 | 55.556 | 54 | 23 | 1 | 169 | 221 | 23 | 76 | 3.83e-12 | 65.5 |
| MS.gene070916.t1 | AT5G45580 | 50.769 | 65 | 31 | 1 | 158 | 221 | 12 | 76 | 4.27e-12 | 65.9 |
| MS.gene070916.t1 | AT5G24470 | 29.134 | 127 | 85 | 3 | 13 | 135 | 49 | 174 | 4.87e-12 | 67.0 |
| MS.gene070916.t1 | AT3G04450 | 52.542 | 59 | 27 | 1 | 165 | 222 | 234 | 292 | 5.02e-12 | 66.6 |
| MS.gene070916.t1 | AT3G04450 | 52.542 | 59 | 27 | 1 | 165 | 222 | 194 | 252 | 5.49e-12 | 66.2 |
| MS.gene070916.t1 | AT3G04450 | 52.542 | 59 | 27 | 1 | 165 | 222 | 194 | 252 | 5.49e-12 | 66.2 |
| MS.gene070916.t1 | AT3G04450 | 52.542 | 59 | 27 | 1 | 165 | 222 | 234 | 292 | 5.53e-12 | 65.9 |
| MS.gene070916.t1 | AT5G45580 | 57.407 | 54 | 22 | 1 | 169 | 221 | 7 | 60 | 7.12e-12 | 65.1 |
Find 64 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACAAAATTGGATGGAAAT+TGG | 0.274934 | 5.1:-43378420 | MS.gene070916:CDS |
| CATATGGGGCTTGCGAATAT+TGG | 0.282422 | 5.1:-43379142 | MS.gene070916:CDS |
| ACATGTTGCTAGTCATTTAC+AGG | 0.286115 | 5.1:-43378737 | MS.gene070916:intron |
| AATTCATCAGTTGATTATTT+CGG | 0.292540 | 5.1:-43378330 | MS.gene070916:CDS |
| GCAATAACGTTGAGACCATT+AGG | 0.294493 | 5.1:+43379632 | None:intergenic |
| AAGATGATGCACAACAAAAT+TGG | 0.295199 | 5.1:-43378431 | MS.gene070916:CDS |
| GAATTAATCACGACACAATC+TGG | 0.322128 | 5.1:+43378348 | None:intergenic |
| GAACGTCATCCTGTTGGTTC+CGG | 0.354086 | 5.1:+43378496 | None:intergenic |
| TTCTGATGCCTTGAACTTGT+TGG | 0.365455 | 5.1:-43379424 | MS.gene070916:CDS |
| GTTACAAAGTCTATCACATA+TGG | 0.379871 | 5.1:-43379158 | MS.gene070916:CDS |
| TCTTCAAAATATTGGAAGCT+TGG | 0.394226 | 5.1:-43379042 | MS.gene070916:CDS |
| AATTCATAGGCATCCATGTT+TGG | 0.395764 | 5.1:+43379357 | None:intergenic |
| CTTGAACTTGTTGGAAAGAA+AGG | 0.398808 | 5.1:-43379415 | MS.gene070916:CDS |
| ATCAGAAGCTGTATTGCATT+TGG | 0.403201 | 5.1:+43379440 | None:intergenic |
| CAAGTAACTAACCTTGATAA+TGG | 0.405402 | 5.1:+43379555 | None:intergenic |
| CTTTCTTTCCAACAAGTTCA+AGG | 0.409488 | 5.1:+43379416 | None:intergenic |
| CGGGAAAGAGAAGATGATAA+TGG | 0.414808 | 5.1:-43378999 | MS.gene070916:CDS |
| CCCGCGGATAACTTTCATCT+TGG | 0.418067 | 5.1:+43378457 | None:intergenic |
| ACATCTCCTCAATGGTGTTA+AGG | 0.419121 | 5.1:+43379588 | None:intergenic |
| CAATAACGTTGAGACCATTA+GGG | 0.421209 | 5.1:+43379633 | None:intergenic |
| CTCAAGCTCAGCGGATTGAC+CGG | 0.449486 | 5.1:-43378515 | MS.gene070916:CDS |
| GCGGATTGACCGGAACCAAC+AGG | 0.466931 | 5.1:-43378505 | MS.gene070916:CDS |
| ATTGGAAGCTTGGATGTTCA+AGG | 0.468841 | 5.1:-43379032 | MS.gene070916:CDS |
| ATGTTCAAGGTCATAGAAAA+CGG | 0.468876 | 5.1:-43379019 | MS.gene070916:CDS |
| TTACAAAGTCTATCACATAT+GGG | 0.475108 | 5.1:-43379157 | MS.gene070916:CDS |
| TGGCATCATGTTGTAAGAAA+AGG | 0.476984 | 5.1:-43379083 | MS.gene070916:CDS |
| GACAACCCGTCATTCCCTAA+TGG | 0.483413 | 5.1:-43379647 | MS.gene070916:CDS |
| TTGGACCAAGCCGTTGTATG+AGG | 0.493917 | 5.1:-43379123 | MS.gene070916:CDS |
| CTCAATGGTGTTAAGGAAAG+TGG | 0.494366 | 5.1:+43379595 | None:intergenic |
| GCCTCGTTTGTCATGGTCAC+CGG | 0.494740 | 5.1:-43378952 | MS.gene070916:CDS |
| AGGGAATGACGGGTTGTCAA+TGG | 0.500611 | 5.1:+43379652 | None:intergenic |
| TGTTCAAGGTCATAGAAAAC+GGG | 0.501689 | 5.1:-43379018 | MS.gene070916:CDS |
| AGCATGTTGAACAAATTCAT+AGG | 0.506691 | 5.1:+43379344 | None:intergenic |
| ACACAATCTGGGAACAAGTT+GGG | 0.508030 | 5.1:+43378360 | None:intergenic |
| TTATGGGCTGTCAATCAACT+AGG | 0.526348 | 5.1:-43378912 | MS.gene070916:CDS |
| TTGAATTGTTCCTCATACAA+CGG | 0.530062 | 5.1:+43379113 | None:intergenic |
| AGGAAAGAACCATACTATCA+AGG | 0.531753 | 5.1:+43378889 | None:intergenic |
| CACTTTCCTTAACACCATTG+AGG | 0.536078 | 5.1:-43379594 | MS.gene070916:CDS |
| TGTAATCGATGCCATTATCA+AGG | 0.541272 | 5.1:-43379566 | MS.gene070916:intron |
| TGACGGGTTGTCAATGGAAA+GGG | 0.552528 | 5.1:+43379658 | None:intergenic |
| TGAGACCATTAGGGAATGAC+GGG | 0.552778 | 5.1:+43379642 | None:intergenic |
| GACACAATCTGGGAACAAGT+TGG | 0.557153 | 5.1:+43378359 | None:intergenic |
| TGATGCACAACAAAATTGGA+TGG | 0.559172 | 5.1:-43378427 | MS.gene070916:CDS |
| TCGATTACACATCTCCTCAA+TGG | 0.564409 | 5.1:+43379580 | None:intergenic |
| AATTAATCACGACACAATCT+GGG | 0.566059 | 5.1:+43378349 | None:intergenic |
| TTTGTAACAGAACTTAATGT+GGG | 0.567790 | 5.1:+43379173 | None:intergenic |
| CATCTTGAACGTCATCCTGT+TGG | 0.572615 | 5.1:+43378490 | None:intergenic |
| GATGTTCATGGTTTGAGTGT+AGG | 0.572619 | 5.1:-43378760 | MS.gene070916:CDS |
| TTGAGACCATTAGGGAATGA+CGG | 0.573205 | 5.1:+43379641 | None:intergenic |
| CGAAGAAGCCTCGTTTGTCA+TGG | 0.575576 | 5.1:-43378959 | MS.gene070916:CDS |
| AACAGGAATATTGAGTTGTA+CGG | 0.581006 | 5.1:+43379320 | None:intergenic |
| CTTTGTAACAGAACTTAATG+TGG | 0.582713 | 5.1:+43379172 | None:intergenic |
| ATGACGGGTTGTCAATGGAA+AGG | 0.593960 | 5.1:+43379657 | None:intergenic |
| TTGTTCCTCATACAACGGCT+TGG | 0.596667 | 5.1:+43379118 | None:intergenic |
| AGGATGACGTTCAAGATGAG+TGG | 0.604590 | 5.1:-43378485 | MS.gene070916:CDS |
| ATCAGTTGATTATTTCGGCT+AGG | 0.608424 | 5.1:-43378325 | None:intergenic |
| CCAAGATGAAAGTTATCCGC+GGG | 0.608633 | 5.1:-43378457 | MS.gene070916:CDS |
| AGGAACAATTCAAGATGATG+TGG | 0.609752 | 5.1:-43379103 | MS.gene070916:CDS |
| TGTGCATCATCTTGTACCCG+CGG | 0.630231 | 5.1:+43378441 | None:intergenic |
| TGATGTTCATATGCCAAACA+TGG | 0.637365 | 5.1:-43379370 | MS.gene070916:CDS |
| TACAAAGTCTATCACATATG+GGG | 0.656295 | 5.1:-43379156 | MS.gene070916:CDS |
| ACCAAGATGAAAGTTATCCG+CGG | 0.659940 | 5.1:-43378458 | MS.gene070916:CDS |
| TCCGGTGACCATGACAAACG+AGG | 0.694527 | 5.1:+43378951 | None:intergenic |
| GTGATGACTCTCAAGCTCAG+CGG | 0.726092 | 5.1:-43378524 | MS.gene070916:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATTTAAATTTAAATTTA+TGG | - | chr5.1:43379335-43379354 | MS.gene070916:CDS | 0.0% |
| !! | AATAAAAATCTTCAAAATAT+TGG | - | chr5.1:43378938-43378957 | MS.gene070916:CDS | 10.0% |
| !!! | TTAAAATTGTAATTTTCATG+TGG | - | chr5.1:43379364-43379383 | MS.gene070916:CDS | 15.0% |
| !! | AAGAAAAACTTACTAATAAC+AGG | + | chr5.1:43378688-43378707 | None:intergenic | 20.0% |
| !! | AATTCATCAGTTGATTATTT+CGG | - | chr5.1:43379658-43379677 | MS.gene070916:CDS | 20.0% |
| !! | ACAAAGCAAAGAAAATAATT+AGG | + | chr5.1:43379122-43379141 | None:intergenic | 20.0% |
| !! | TAAAATGATTCTCAAAAAGA+TGG | - | chr5.1:43379206-43379225 | MS.gene070916:intron | 20.0% |
| !! | TGTTTGTATTATTTAACAAC+TGG | - | chr5.1:43379139-43379158 | MS.gene070916:CDS | 20.0% |
| !!! | ATCTTTTTGAGAATCATTTT+AGG | + | chr5.1:43379207-43379226 | None:intergenic | 20.0% |
| ! | AAAAAAGTTGCGAATATTGT+CGG | + | chr5.1:43379599-43379618 | None:intergenic | 25.0% |
| ! | AACACTAGAATTGATGAATA+AGG | + | chr5.1:43378469-43378488 | None:intergenic | 25.0% |
| ! | TTAAAATCACACAAAACATG+TGG | + | chr5.1:43379318-43379337 | None:intergenic | 25.0% |
| ! | TTACAAAGTCTATCACATAT+GGG | - | chr5.1:43378831-43378850 | MS.gene070916:intron | 25.0% |
| ! | TTTGTAACAGAACTTAATGT+GGG | + | chr5.1:43378818-43378837 | None:intergenic | 25.0% |
| AAGATGATGCACAACAAAAT+TGG | - | chr5.1:43379557-43379576 | MS.gene070916:intron | 30.0% | |
| AATTAATCACGACACAATCT+GGG | + | chr5.1:43379642-43379661 | None:intergenic | 30.0% | |
| AGCATGTTGAACAAATTCAT+AGG | + | chr5.1:43378647-43378666 | None:intergenic | 30.0% | |
| ATGTTCAAGGTCATAGAAAA+CGG | - | chr5.1:43378969-43378988 | MS.gene070916:CDS | 30.0% | |
| CAACAAAATTGGATGGAAAT+TGG | - | chr5.1:43379568-43379587 | MS.gene070916:CDS | 30.0% | |
| CAAGTAACTAACCTTGATAA+TGG | + | chr5.1:43378436-43378455 | None:intergenic | 30.0% | |
| CGATTGATGAGAAAAAATGT+GGG | - | chr5.1:43379422-43379441 | MS.gene070916:CDS | 30.0% | |
| CTTTGTAACAGAACTTAATG+TGG | + | chr5.1:43378819-43378838 | None:intergenic | 30.0% | |
| GTTACAAAGTCTATCACATA+TGG | - | chr5.1:43378830-43378849 | MS.gene070916:intron | 30.0% | |
| TACAAAGTCTATCACATATG+GGG | - | chr5.1:43378832-43378851 | MS.gene070916:intron | 30.0% | |
| TCGATTGATGAGAAAAAATG+TGG | - | chr5.1:43379421-43379440 | MS.gene070916:CDS | 30.0% | |
| TCTTCAAAATATTGGAAGCT+TGG | - | chr5.1:43378946-43378965 | MS.gene070916:CDS | 30.0% | |
| TTGAATTGTTCCTCATACAA+CGG | + | chr5.1:43378878-43378897 | None:intergenic | 30.0% | |
| ! | AACAGGAATATTGAGTTGTA+CGG | + | chr5.1:43378671-43378690 | None:intergenic | 30.0% |
| ! | AACTGCATCAACGATTTTTA+TGG | - | chr5.1:43379059-43379078 | MS.gene070916:CDS | 30.0% |
| ! | ACTGCATCAACGATTTTTAT+GGG | - | chr5.1:43379060-43379079 | MS.gene070916:CDS | 30.0% |
| ! | CATTATCAAGGTTAGTTACT+TGG | - | chr5.1:43378434-43378453 | MS.gene070916:CDS | 30.0% |
| !! | TTCTCTCACTTATTTTTCAG+AGG | - | chr5.1:43379176-43379195 | MS.gene070916:CDS | 30.0% |
| AAAAATCGTTGATGCAGTTC+CGG | + | chr5.1:43379058-43379077 | None:intergenic | 35.0% | |
| AATTCATAGGCATCCATGTT+TGG | + | chr5.1:43378634-43378653 | None:intergenic | 35.0% | |
| ACATGTTGCTAGTCATTTAC+AGG | - | chr5.1:43379251-43379270 | MS.gene070916:intron | 35.0% | |
| AGGAAAGAACCATACTATCA+AGG | + | chr5.1:43379102-43379121 | None:intergenic | 35.0% | |
| AGGAACAATTCAAGATGATG+TGG | - | chr5.1:43378885-43378904 | MS.gene070916:intron | 35.0% | |
| ATCAGAAGCTGTATTGCATT+TGG | + | chr5.1:43378551-43378570 | None:intergenic | 35.0% | |
| ATTCAGTAGACATCACTACA+AGG | + | chr5.1:43378793-43378812 | None:intergenic | 35.0% | |
| CAATAACGTTGAGACCATTA+GGG | + | chr5.1:43378358-43378377 | None:intergenic | 35.0% | |
| CTCAAAAAGATGGATGTTCA+TGG | - | chr5.1:43379216-43379235 | MS.gene070916:intron | 35.0% | |
| CTTTCTTTCCAACAAGTTCA+AGG | + | chr5.1:43378575-43378594 | None:intergenic | 35.0% | |
| GAATTAATCACGACACAATC+TGG | + | chr5.1:43379643-43379662 | None:intergenic | 35.0% | |
| TGATGCACAACAAAATTGGA+TGG | - | chr5.1:43379561-43379580 | MS.gene070916:intron | 35.0% | |
| TGATGTTCATATGCCAAACA+TGG | - | chr5.1:43378618-43378637 | MS.gene070916:intron | 35.0% | |
| TGGCATCATGTTGTAAGAAA+AGG | - | chr5.1:43378905-43378924 | MS.gene070916:CDS | 35.0% | |
| TGTAATCGATGCCATTATCA+AGG | - | chr5.1:43378422-43378441 | MS.gene070916:CDS | 35.0% | |
| TGTTCAAGGTCATAGAAAAC+GGG | - | chr5.1:43378970-43378989 | MS.gene070916:CDS | 35.0% | |
| !! | CTTGAACTTGTTGGAAAGAA+AGG | - | chr5.1:43378573-43378592 | MS.gene070916:CDS | 35.0% |
| ACACAATCTGGGAACAAGTT+GGG | + | chr5.1:43379631-43379650 | None:intergenic | 40.0% | |
| ACCAAGATGAAAGTTATCCG+CGG | - | chr5.1:43379530-43379549 | MS.gene070916:intron | 40.0% | |
| ATTGGAAGCTTGGATGTTCA+AGG | - | chr5.1:43378956-43378975 | MS.gene070916:CDS | 40.0% | |
| CACTTTCCTTAACACCATTG+AGG | - | chr5.1:43378394-43378413 | MS.gene070916:CDS | 40.0% | |
| CGGGAAAGAGAAGATGATAA+TGG | - | chr5.1:43378989-43379008 | MS.gene070916:CDS | 40.0% | |
| GATGTTCATGGTTTGAGTGT+AGG | - | chr5.1:43379228-43379247 | MS.gene070916:intron | 40.0% | |
| GCAATAACGTTGAGACCATT+AGG | + | chr5.1:43378359-43378378 | None:intergenic | 40.0% | |
| TCGATTACACATCTCCTCAA+TGG | + | chr5.1:43378411-43378430 | None:intergenic | 40.0% | |
| TTCTGATGCCTTGAACTTGT+TGG | - | chr5.1:43378564-43378583 | MS.gene070916:CDS | 40.0% | |
| TTGAGACCATTAGGGAATGA+CGG | + | chr5.1:43378350-43378369 | None:intergenic | 40.0% | |
| ! | ACATCTCCTCAATGGTGTTA+AGG | + | chr5.1:43378403-43378422 | None:intergenic | 40.0% |
| ! | CTCAATGGTGTTAAGGAAAG+TGG | + | chr5.1:43378396-43378415 | None:intergenic | 40.0% |
| ! | TCAACTAGGCCTTGATAGTA+TGG | - | chr5.1:43379090-43379109 | MS.gene070916:CDS | 40.0% |
| ! | TTATGGGCTGTCAATCAACT+AGG | - | chr5.1:43379076-43379095 | MS.gene070916:CDS | 40.0% |
| AGGATGACGTTCAAGATGAG+TGG | - | chr5.1:43379503-43379522 | MS.gene070916:intron | 45.0% | |
| CATATGGGGCTTGCGAATAT+TGG | - | chr5.1:43378846-43378865 | MS.gene070916:intron | 45.0% | |
| CATCTTGAACGTCATCCTGT+TGG | + | chr5.1:43379501-43379520 | None:intergenic | 45.0% | |
| CCAAGATGAAAGTTATCCGC+GGG | - | chr5.1:43379531-43379550 | MS.gene070916:intron | 45.0% | |
| GACACAATCTGGGAACAAGT+TGG | + | chr5.1:43379632-43379651 | None:intergenic | 45.0% | |
| TGAGACCATTAGGGAATGAC+GGG | + | chr5.1:43378349-43378368 | None:intergenic | 45.0% | |
| TTGTTCCTCATACAACGGCT+TGG | + | chr5.1:43378873-43378892 | None:intergenic | 45.0% | |
| !! | ATGACGGGTTGTCAATGGAA+AGG | + | chr5.1:43378334-43378353 | None:intergenic | 45.0% |
| !! | TGACGGGTTGTCAATGGAAA+GGG | + | chr5.1:43378333-43378352 | None:intergenic | 45.0% |
| CCCGCGGATAACTTTCATCT+TGG | + | chr5.1:43379534-43379553 | None:intergenic | 50.0% | |
| CGAAGAAGCCTCGTTTGTCA+TGG | - | chr5.1:43379029-43379048 | MS.gene070916:CDS | 50.0% | |
| GACAACCCGTCATTCCCTAA+TGG | - | chr5.1:43378341-43378360 | MS.gene070916:CDS | 50.0% | |
| GTGATGACTCTCAAGCTCAG+CGG | - | chr5.1:43379464-43379483 | MS.gene070916:intron | 50.0% | |
| TGTGCATCATCTTGTACCCG+CGG | + | chr5.1:43379550-43379569 | None:intergenic | 50.0% | |
| TTGGACCAAGCCGTTGTATG+AGG | - | chr5.1:43378865-43378884 | MS.gene070916:intron | 50.0% | |
| !! | AGGGAATGACGGGTTGTCAA+TGG | + | chr5.1:43378339-43378358 | None:intergenic | 50.0% |
| !! | GAACGTCATCCTGTTGGTTC+CGG | + | chr5.1:43379495-43379514 | None:intergenic | 50.0% |
| GCCTCGTTTGTCATGGTCAC+CGG | - | chr5.1:43379036-43379055 | MS.gene070916:CDS | 55.0% | |
| TCCGGTGACCATGACAAACG+AGG | + | chr5.1:43379040-43379059 | None:intergenic | 55.0% | |
| !! | CTCAAGCTCAGCGGATTGAC+CGG | - | chr5.1:43379473-43379492 | MS.gene070916:intron | 55.0% |
| ! | GCGGATTGACCGGAACCAAC+AGG | - | chr5.1:43379483-43379502 | MS.gene070916:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 43378326 | 43379684 | 43378326 | ID=MS.gene070916 |
| chr5.1 | mRNA | 43378326 | 43379684 | 43378326 | ID=MS.gene070916.t1;Parent=MS.gene070916 |
| chr5.1 | exon | 43379567 | 43379684 | 43379567 | ID=MS.gene070916.t1.exon1;Parent=MS.gene070916.t1 |
| chr5.1 | CDS | 43379567 | 43379684 | 43379567 | ID=cds.MS.gene070916.t1;Parent=MS.gene070916.t1 |
| chr5.1 | exon | 43379316 | 43379465 | 43379316 | ID=MS.gene070916.t1.exon2;Parent=MS.gene070916.t1 |
| chr5.1 | CDS | 43379316 | 43379465 | 43379316 | ID=cds.MS.gene070916.t1;Parent=MS.gene070916.t1 |
| chr5.1 | exon | 43378904 | 43379212 | 43378904 | ID=MS.gene070916.t1.exon3;Parent=MS.gene070916.t1 |
| chr5.1 | CDS | 43378904 | 43379212 | 43378904 | ID=cds.MS.gene070916.t1;Parent=MS.gene070916.t1 |
| chr5.1 | exon | 43378738 | 43378814 | 43378738 | ID=MS.gene070916.t1.exon4;Parent=MS.gene070916.t1 |
| chr5.1 | CDS | 43378738 | 43378814 | 43378738 | ID=cds.MS.gene070916.t1;Parent=MS.gene070916.t1 |
| chr5.1 | exon | 43378326 | 43378613 | 43378326 | ID=MS.gene070916.t1.exon5;Parent=MS.gene070916.t1 |
| chr5.1 | CDS | 43378326 | 43378613 | 43378326 | ID=cds.MS.gene070916.t1;Parent=MS.gene070916.t1 |
| Gene Sequence |
| Protein sequence |
