Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07095.t1 | XP_024632961.1 | 84.8 | 800 | 94 | 4 | 1 | 772 | 1 | 800 | 0.00E+00 | 1355.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07095.t1 | Q9SZL8 | 27.0 | 636 | 394 | 11 | 32 | 665 | 70 | 637 | 4.4e-64 | 247.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07095.t1 | D3YBB9 | 76.9 | 774 | 159 | 4 | 1 | 764 | 49 | 812 | 0.0e+00 | 1194.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene07095.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07095.t1 | MTR_0558s0020 | 87.500 | 296 | 36 | 1 | 1 | 295 | 1 | 296 | 0.0 | 548 |
MS.gene07095.t1 | MTR_1g083640 | 83.099 | 284 | 32 | 1 | 1 | 268 | 1 | 284 | 2.00e-172 | 497 |
MS.gene07095.t1 | MTR_8g446020 | 73.898 | 295 | 38 | 1 | 1 | 295 | 1 | 256 | 1.93e-152 | 445 |
MS.gene07095.t1 | MTR_6g090505 | 83.544 | 237 | 39 | 0 | 65 | 301 | 1 | 237 | 2.00e-142 | 423 |
MS.gene07095.t1 | MTR_6g090505 | 67.647 | 102 | 6 | 2 | 396 | 495 | 230 | 306 | 3.80e-34 | 134 |
MS.gene07095.t1 | MTR_6g090505 | 75.510 | 49 | 12 | 0 | 567 | 615 | 314 | 362 | 9.35e-11 | 64.7 |
MS.gene07095.t1 | MTR_2g014100 | 82.449 | 245 | 34 | 1 | 1 | 236 | 1 | 245 | 3.38e-142 | 418 |
MS.gene07095.t1 | MTR_0337s0040 | 72.031 | 261 | 33 | 2 | 1 | 260 | 1 | 222 | 4.53e-124 | 371 |
MS.gene07095.t1 | MTR_3g008240 | 84.236 | 203 | 31 | 1 | 1 | 202 | 1 | 203 | 4.63e-118 | 354 |
MS.gene07095.t1 | MTR_4g040430 | 83.663 | 202 | 29 | 1 | 1 | 202 | 1 | 198 | 1.84e-117 | 352 |
MS.gene07095.t1 | MTR_0337s0060 | 58.861 | 316 | 30 | 4 | 447 | 759 | 21 | 239 | 1.46e-108 | 331 |
MS.gene07095.t1 | MTR_5g071590 | 74.444 | 180 | 33 | 2 | 1 | 167 | 1 | 180 | 2.70e-90 | 281 |
MS.gene07095.t1 | MTR_1g055240 | 88.028 | 142 | 17 | 0 | 91 | 232 | 3 | 144 | 7.78e-87 | 271 |
MS.gene07095.t1 | MTR_0019s0290 | 82.353 | 153 | 24 | 1 | 84 | 233 | 8 | 160 | 7.01e-86 | 269 |
MS.gene07095.t1 | MTR_3g028680 | 81.013 | 158 | 27 | 1 | 618 | 772 | 1 | 158 | 6.34e-84 | 265 |
MS.gene07095.t1 | MTR_2g067090 | 78.065 | 155 | 31 | 1 | 621 | 772 | 99 | 253 | 3.37e-75 | 246 |
MS.gene07095.t1 | MTR_4g133495 | 62.088 | 182 | 43 | 2 | 576 | 754 | 88 | 246 | 3.97e-66 | 221 |
MS.gene07095.t1 | MTR_4g133340 | 62.088 | 182 | 43 | 2 | 576 | 754 | 88 | 246 | 3.97e-66 | 221 |
MS.gene07095.t1 | MTR_1281s0010 | 82.569 | 109 | 19 | 0 | 19 | 127 | 1 | 109 | 1.88e-57 | 191 |
MS.gene07095.t1 | MTR_6g051425 | 32.075 | 318 | 185 | 6 | 40 | 341 | 22 | 324 | 1.31e-38 | 147 |
MS.gene07095.t1 | MTR_4g008820 | 83.750 | 80 | 12 | 1 | 1 | 79 | 125 | 204 | 1.74e-31 | 131 |
MS.gene07095.t1 | MTR_8g046060 | 77.273 | 88 | 11 | 2 | 1 | 79 | 91 | 178 | 3.77e-31 | 122 |
MS.gene07095.t1 | MTR_2g067130 | 62.963 | 81 | 24 | 2 | 695 | 772 | 46 | 123 | 5.23e-22 | 93.6 |
MS.gene07095.t1 | MTR_1g070355 | 26.852 | 324 | 216 | 6 | 41 | 362 | 80 | 384 | 2.33e-19 | 93.2 |
MS.gene07095.t1 | MTR_0402s0040 | 25.405 | 185 | 119 | 4 | 49 | 233 | 40 | 205 | 2.06e-14 | 77.0 |
MS.gene07095.t1 | MTR_0337s0050 | 75.000 | 36 | 9 | 0 | 259 | 294 | 14 | 49 | 1.51e-13 | 67.0 |
MS.gene07095.t1 | MTR_4g035820 | 22.414 | 290 | 192 | 7 | 17 | 299 | 61 | 324 | 7.44e-13 | 72.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07095.t1 | AT4G38180 | 27.769 | 641 | 383 | 13 | 32 | 665 | 70 | 637 | 1.08e-70 | 248 |
MS.gene07095.t1 | AT4G15090 | 25.000 | 696 | 435 | 15 | 50 | 741 | 66 | 678 | 3.59e-59 | 216 |
MS.gene07095.t1 | AT4G15090 | 25.000 | 696 | 435 | 15 | 50 | 741 | 66 | 678 | 3.59e-59 | 216 |
MS.gene07095.t1 | AT4G15090 | 25.000 | 696 | 435 | 15 | 50 | 741 | 66 | 678 | 3.59e-59 | 216 |
MS.gene07095.t1 | AT4G15090 | 25.000 | 696 | 435 | 15 | 50 | 741 | 66 | 678 | 3.59e-59 | 216 |
MS.gene07095.t1 | AT4G15090 | 25.000 | 696 | 435 | 15 | 50 | 741 | 66 | 678 | 3.59e-59 | 216 |
MS.gene07095.t1 | AT2G27110 | 25.070 | 714 | 423 | 19 | 10 | 719 | 29 | 634 | 8.24e-54 | 200 |
MS.gene07095.t1 | AT2G27110 | 25.070 | 714 | 423 | 19 | 10 | 719 | 29 | 634 | 8.24e-54 | 200 |
MS.gene07095.t1 | AT2G27110 | 27.308 | 509 | 313 | 11 | 213 | 719 | 36 | 489 | 4.71e-53 | 196 |
MS.gene07095.t1 | AT3G06250 | 25.118 | 633 | 351 | 16 | 34 | 661 | 189 | 703 | 3.77e-52 | 194 |
MS.gene07095.t1 | AT3G06250 | 25.118 | 633 | 351 | 16 | 34 | 661 | 189 | 703 | 3.77e-52 | 194 |
MS.gene07095.t1 | AT3G06250 | 25.118 | 633 | 351 | 16 | 34 | 661 | 189 | 703 | 3.77e-52 | 194 |
MS.gene07095.t1 | AT1G76320 | 24.815 | 677 | 413 | 19 | 50 | 720 | 12 | 598 | 3.70e-50 | 187 |
MS.gene07095.t1 | AT1G76320 | 24.332 | 674 | 418 | 17 | 50 | 719 | 12 | 597 | 2.09e-49 | 186 |
MS.gene07095.t1 | AT1G76320 | 24.852 | 676 | 412 | 19 | 50 | 719 | 12 | 597 | 2.20e-49 | 186 |
MS.gene07095.t1 | AT1G76320 | 24.852 | 676 | 412 | 19 | 50 | 719 | 12 | 597 | 2.20e-49 | 186 |
MS.gene07095.t1 | AT3G22170 | 22.466 | 730 | 449 | 17 | 34 | 753 | 69 | 691 | 1.24e-47 | 182 |
MS.gene07095.t1 | AT3G22170 | 22.466 | 730 | 449 | 17 | 34 | 753 | 69 | 691 | 1.24e-47 | 182 |
MS.gene07095.t1 | AT5G18960 | 24.730 | 647 | 359 | 18 | 24 | 661 | 200 | 727 | 1.55e-46 | 178 |
MS.gene07095.t1 | AT5G18960 | 24.730 | 647 | 359 | 18 | 24 | 661 | 200 | 727 | 1.55e-46 | 178 |
MS.gene07095.t1 | AT4G38170 | 24.532 | 481 | 295 | 13 | 235 | 703 | 24 | 448 | 7.51e-44 | 167 |
MS.gene07095.t1 | AT1G10240 | 24.719 | 623 | 377 | 19 | 49 | 659 | 62 | 604 | 5.17e-42 | 164 |
MS.gene07095.t1 | AT1G10240 | 24.719 | 623 | 377 | 19 | 49 | 659 | 62 | 604 | 5.17e-42 | 164 |
MS.gene07095.t1 | AT5G28530 | 24.100 | 639 | 388 | 17 | 40 | 660 | 60 | 619 | 7.98e-42 | 163 |
MS.gene07095.t1 | AT5G28530 | 23.944 | 639 | 385 | 18 | 40 | 660 | 60 | 615 | 5.82e-41 | 160 |
MS.gene07095.t1 | AT5G28530 | 23.944 | 639 | 385 | 18 | 40 | 660 | 60 | 615 | 5.82e-41 | 160 |
MS.gene07095.t1 | AT2G32250 | 23.490 | 745 | 433 | 20 | 4 | 743 | 10 | 622 | 2.41e-39 | 156 |
MS.gene07095.t1 | AT2G32250 | 23.490 | 745 | 433 | 20 | 4 | 743 | 10 | 622 | 3.32e-39 | 156 |
MS.gene07095.t1 | AT2G32250 | 23.490 | 745 | 433 | 20 | 4 | 743 | 10 | 622 | 3.32e-39 | 156 |
MS.gene07095.t1 | AT2G32250 | 23.490 | 745 | 433 | 20 | 4 | 743 | 10 | 622 | 3.86e-39 | 156 |
MS.gene07095.t1 | AT2G32250 | 23.490 | 745 | 433 | 20 | 4 | 743 | 10 | 622 | 3.86e-39 | 156 |
MS.gene07095.t1 | AT2G32250 | 23.490 | 745 | 433 | 20 | 4 | 743 | 10 | 622 | 3.86e-39 | 156 |
MS.gene07095.t1 | AT2G32250 | 23.446 | 708 | 408 | 18 | 41 | 743 | 3 | 581 | 1.85e-38 | 154 |
MS.gene07095.t1 | AT2G32250 | 23.446 | 708 | 408 | 18 | 41 | 743 | 3 | 581 | 2.12e-38 | 153 |
MS.gene07095.t1 | AT1G80010 | 23.913 | 644 | 385 | 23 | 41 | 662 | 101 | 661 | 1.30e-36 | 147 |
MS.gene07095.t1 | AT1G52520 | 22.080 | 625 | 407 | 16 | 41 | 662 | 91 | 638 | 2.20e-33 | 137 |
MS.gene07095.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 2.48e-27 | 119 |
MS.gene07095.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.23e-12 | 71.2 |
MS.gene07095.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 2.60e-27 | 119 |
MS.gene07095.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.20e-12 | 71.2 |
MS.gene07095.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 2.60e-27 | 119 |
MS.gene07095.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.20e-12 | 71.2 |
MS.gene07095.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 106 | 369 | 2.60e-27 | 118 |
MS.gene07095.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 438 | 558 | 2.16e-12 | 71.2 |
MS.gene07095.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 177 | 440 | 2.98e-27 | 119 |
MS.gene07095.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 509 | 629 | 2.62e-12 | 70.9 |
MS.gene07095.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 3.81e-27 | 118 |
MS.gene07095.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.34e-12 | 71.2 |
MS.gene07095.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 219 | 483 | 163 | 426 | 3.81e-27 | 118 |
MS.gene07095.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.34e-12 | 71.2 |
MS.gene07095.t1 | AT5G28530 | 21.781 | 629 | 352 | 20 | 40 | 660 | 60 | 556 | 1.35e-22 | 103 |
MS.gene07095.t1 | AT5G28530 | 21.622 | 629 | 349 | 21 | 40 | 660 | 60 | 552 | 7.38e-22 | 101 |
Find 116 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCATGCTGAGTTGGACTTTA+AGG | 0.133287 | 7.2:+6321631 | MS.gene07095:CDS |
TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 7.2:+6321322 | MS.gene07095:CDS |
AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 7.2:-6322457 | None:intergenic |
CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 7.2:+6321589 | MS.gene07095:CDS |
CAACAAGATTATGCTCTATT+TGG | 0.198611 | 7.2:+6320538 | MS.gene07095:CDS |
TTCATTTCAGCTGCCTTTCT+TGG | 0.201003 | 7.2:+6321041 | MS.gene07095:intron |
CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 7.2:+6321074 | MS.gene07095:CDS |
TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 7.2:-6321168 | None:intergenic |
TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 7.2:-6322451 | None:intergenic |
AATCAGATTTCGACTACAAT+TGG | 0.318540 | 7.2:+6321363 | MS.gene07095:CDS |
TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 7.2:+6322303 | MS.gene07095:CDS |
ACCAGCCTGGTCTGTGTATA+TGG | 0.341000 | 7.2:-6321186 | None:intergenic |
GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 7.2:-6320588 | None:intergenic |
GGTTTCGAATGTTGATGTTT+TGG | 0.354913 | 7.2:+6321886 | MS.gene07095:CDS |
TATGCATTGGTCTTCAGTTT+GGG | 0.370760 | 7.2:+6321463 | MS.gene07095:CDS |
CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 7.2:+6322295 | MS.gene07095:CDS |
AACAATAAATATCGGCCATT+AGG | 0.388497 | 7.2:+6320595 | MS.gene07095:CDS |
ACCGAACAAACAATAAATAT+CGG | 0.389395 | 7.2:+6320587 | MS.gene07095:CDS |
GTATGCATTGGTCTTCAGTT+TGG | 0.392120 | 7.2:+6321462 | MS.gene07095:CDS |
GTCTTTAGTGCCAACATTCA+TGG | 0.395146 | 7.2:-6322179 | None:intergenic |
TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 7.2:-6320058 | None:intergenic |
AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 7.2:+6322443 | MS.gene07095:CDS |
TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 7.2:-6322433 | None:intergenic |
TTCCTTCAAATACTATTATG+AGG | 0.399583 | 7.2:+6321763 | MS.gene07095:CDS |
GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 7.2:+6322328 | MS.gene07095:CDS |
TAAAGAATCATGGAAGTCTT+TGG | 0.408500 | 7.2:+6319829 | MS.gene07095:CDS |
CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 7.2:+6322011 | MS.gene07095:CDS |
GATTATGATCTTCAAACCTT+GGG | 0.413114 | 7.2:-6321934 | None:intergenic |
ATAACACTGGATTCTCTGTT+AGG | 0.417808 | 7.2:+6319900 | MS.gene07095:CDS |
CGATTATGATCTTCAAACCT+TGG | 0.425681 | 7.2:-6321935 | None:intergenic |
CGTTATGTTTGTAACAAAGA+AGG | 0.427485 | 7.2:+6319983 | MS.gene07095:CDS |
CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 7.2:+6320235 | MS.gene07095:CDS |
AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 7.2:+6320117 | MS.gene07095:CDS |
TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 7.2:-6321179 | None:intergenic |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 7.2:+6320100 | MS.gene07095:CDS |
CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 7.2:-6322112 | None:intergenic |
GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 7.2:+6320265 | MS.gene07095:CDS |
ATCTGAGAGTGGACAATTGA+CGG | 0.452529 | 7.2:+6319754 | MS.gene07095:CDS |
TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 7.2:+6321253 | MS.gene07095:CDS |
GGCCTACTTCGGACTTTAAG+TGG | 0.458978 | 7.2:+6321417 | MS.gene07095:CDS |
ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 7.2:+6322012 | MS.gene07095:CDS |
ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 7.2:+6319949 | MS.gene07095:CDS |
GGGTTGTCACAGTCGACATT+GGG | 0.480993 | 7.2:+6321969 | MS.gene07095:CDS |
GAAGTGATGGGTCAAGGAGT+TGG | 0.484292 | 7.2:+6320310 | MS.gene07095:CDS |
CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 7.2:-6321765 | None:intergenic |
TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 7.2:-6320094 | None:intergenic |
TTTAATTATGCATATAACAC+TGG | 0.485542 | 7.2:+6319887 | MS.gene07095:CDS |
CTGTCTGTGAACCATCTGTT+GGG | 0.487793 | 7.2:+6322404 | MS.gene07095:CDS |
TCTAATGACAACTCGTCAAA+AGG | 0.488137 | 7.2:+6320378 | MS.gene07095:CDS |
CTCAAGTAGCACAAATGCTC+TGG | 0.489977 | 7.2:-6320205 | None:intergenic |
CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 7.2:+6319943 | MS.gene07095:CDS |
TATGAGGAGGACACAACAAA+AGG | 0.490908 | 7.2:+6321779 | MS.gene07095:CDS |
ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 7.2:-6321054 | None:intergenic |
ATCAGATTTCGACTACAATT+GGG | 0.491708 | 7.2:+6321364 | MS.gene07095:CDS |
CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 7.2:+6320391 | MS.gene07095:CDS |
ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 7.2:+6321603 | MS.gene07095:CDS |
GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 7.2:-6321683 | None:intergenic |
GAGAACATCTTATGAAGTGA+TGG | 0.499875 | 7.2:+6320297 | MS.gene07095:CDS |
TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 7.2:-6320483 | None:intergenic |
GCTGTCTGTGAACCATCTGT+TGG | 0.504047 | 7.2:+6322403 | MS.gene07095:CDS |
AAATGCTCTGGTTTATGTAA+TGG | 0.504865 | 7.2:-6320193 | None:intergenic |
CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 7.2:+6321450 | MS.gene07095:CDS |
ATCATAATCGACTTGATGAA+AGG | 0.507955 | 7.2:+6321948 | MS.gene07095:CDS |
TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 7.2:-6320349 | None:intergenic |
GAGGGATAATCATGCTGAGT+TGG | 0.508852 | 7.2:+6321622 | MS.gene07095:CDS |
ATTGGTCTTCAGTTTGGGTG+AGG | 0.509410 | 7.2:+6321468 | MS.gene07095:CDS |
TGTCTATAAGATATATAAGT+GGG | 0.514682 | 7.2:+6320153 | MS.gene07095:CDS |
GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 7.2:-6321928 | None:intergenic |
TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 7.2:-6321571 | None:intergenic |
TAACAAAGAAGGTTTCAAGA+AGG | 0.525236 | 7.2:+6319994 | MS.gene07095:CDS |
TCATAATCGACTTGATGAAA+GGG | 0.526860 | 7.2:+6321949 | MS.gene07095:CDS |
CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 7.2:-6321760 | None:intergenic |
AGGGTTGTCACAGTCGACAT+TGG | 0.538587 | 7.2:+6321968 | MS.gene07095:CDS |
AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 7.2:-6321566 | None:intergenic |
ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 7.2:+6321780 | MS.gene07095:CDS |
AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 7.2:+6319995 | MS.gene07095:CDS |
CATTTAGTGATAAAGAATCA+TGG | 0.546005 | 7.2:+6319819 | MS.gene07095:CDS |
ACTTCAACAACGCACCAGCC+TGG | 0.557139 | 7.2:-6321199 | None:intergenic |
CTGAAATCCACCATGAATGT+TGG | 0.557140 | 7.2:+6322169 | MS.gene07095:CDS |
AATGAAGCTCTCTCGAAACC+AGG | 0.565261 | 7.2:+6320445 | MS.gene07095:CDS |
TGAAAATTCAGTTATTGATG+CGG | 0.565546 | 7.2:+6319778 | MS.gene07095:CDS |
GTGATGGGTCAAGGAGTTGG+AGG | 0.568802 | 7.2:+6320313 | MS.gene07095:CDS |
TACACGTGTTTGCGCAGATG+CGG | 0.571672 | 7.2:+6322255 | MS.gene07095:CDS |
ATGTCTATAAGATATATAAG+TGG | 0.572287 | 7.2:+6320152 | MS.gene07095:CDS |
GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 7.2:-6321684 | None:intergenic |
TTTGGTGCAGTCCCAACAGA+TGG | 0.581566 | 7.2:-6322415 | None:intergenic |
TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 7.2:-6321705 | None:intergenic |
ATATTAACTTCATCTGAGAG+TGG | 0.588105 | 7.2:+6319743 | MS.gene07095:CDS |
TCTTATGAAGTGATGGGTCA+AGG | 0.589029 | 7.2:+6320304 | MS.gene07095:CDS |
TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 7.2:+6322296 | MS.gene07095:CDS |
ACCATATACACAGACCAGGC+TGG | 0.590176 | 7.2:+6321185 | MS.gene07095:CDS |
ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 7.2:+6322291 | MS.gene07095:CDS |
TTGAAGAAAACCTTTCCCCA+AGG | 0.594796 | 7.2:+6321918 | MS.gene07095:CDS |
TGAAGACTTAGAAGGCGTAA+CGG | 0.598405 | 7.2:-6322371 | None:intergenic |
GACAACTCGTCAAAAGGAGA+TGG | 0.599038 | 7.2:+6320384 | MS.gene07095:CDS |
AGAACATCTTATGAAGTGAT+GGG | 0.601988 | 7.2:+6320298 | MS.gene07095:CDS |
AACTCGTCAAAAGGAGATGG+TGG | 0.603142 | 7.2:+6320387 | MS.gene07095:CDS |
ACGTGTTTGCGCAGATGCGG+AGG | 0.605934 | 7.2:+6322258 | MS.gene07095:CDS |
ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 7.2:+6321681 | MS.gene07095:CDS |
CTTCAAATACTATTATGAGG+AGG | 0.607664 | 7.2:+6321766 | MS.gene07095:CDS |
TTGATATCGTTGCGCTTCAG+TGG | 0.611060 | 7.2:-6322203 | None:intergenic |
AGAACTGGACTGTCACATGT+TGG | 0.620791 | 7.2:-6320043 | None:intergenic |
AGCCACTTAAAGTCCGAAGT+AGG | 0.621799 | 7.2:-6321419 | None:intergenic |
GGGTCAAGGAGTTGGAGGCA+CGG | 0.621882 | 7.2:+6320318 | MS.gene07095:CDS |
ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 7.2:-6321933 | None:intergenic |
GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 7.2:+6321254 | MS.gene07095:CDS |
TTTAGTGCCAACATTCATGG+TGG | 0.641441 | 7.2:-6322176 | None:intergenic |
CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 7.2:+6321604 | MS.gene07095:CDS |
GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 7.2:-6322154 | None:intergenic |
TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 7.2:-6321725 | None:intergenic |
GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 7.2:+6322280 | MS.gene07095:CDS |
CATGTCGACATAAGAAACCC+CGG | 0.663279 | 7.2:-6322030 | None:intergenic |
TCAAACCATATACACAGACC+AGG | 0.671057 | 7.2:+6321181 | MS.gene07095:CDS |
TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 7.2:+6322013 | MS.gene07095:CDS |
ATGTTGATAATGATAATGAG+AGG | 0.683310 | 7.2:+6321864 | MS.gene07095:CDS |
TGTTGATAATGATAATGAGA+GGG | 0.689129 | 7.2:+6321865 | MS.gene07095:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATCATAATTATAGTTTAA+TGG | - | chr7.2:6322830-6322849 | None:intergenic | 10.0% |
!!! | TGTTTTTTATGTTATAAGTT+AGG | + | chr7.2:6322583-6322602 | MS.gene07095:intron | 15.0% |
!! | ATGTCTATAAGATATATAAG+TGG | + | chr7.2:6320152-6320171 | MS.gene07095:CDS | 20.0% |
!! | CAATTCACAAAATAAGAAAT+CGG | + | chr7.2:6319943-6319962 | MS.gene07095:CDS | 20.0% |
!! | TGTCTATAAGATATATAAGT+GGG | + | chr7.2:6320153-6320172 | MS.gene07095:CDS | 20.0% |
!! | TTTAATTATGCATATAACAC+TGG | + | chr7.2:6319887-6319906 | MS.gene07095:CDS | 20.0% |
!!! | AATTTAATGTTCTGGTTTAT+GGG | + | chr7.2:6320770-6320789 | MS.gene07095:intron | 20.0% |
!!! | ACGCATTTATTACTATATTT+TGG | + | chr7.2:6322754-6322773 | MS.gene07095:intron | 20.0% |
!!! | ATGATGAAAAACTGTTTTAA+TGG | + | chr7.2:6321392-6321411 | MS.gene07095:CDS | 20.0% |
!!! | CTATACATTTTCACATTTTT+TGG | + | chr7.2:6322726-6322745 | MS.gene07095:intron | 20.0% |
!!! | TGAATGTTTATATTGATTGA+AGG | + | chr7.2:6320742-6320761 | MS.gene07095:intron | 20.0% |
! | AAAACACCTTGAAAAACATT+CGG | - | chr7.2:6321230-6321249 | None:intergenic | 25.0% |
! | AAACCAAATTAACAGTCTAA+TGG | - | chr7.2:6322787-6322806 | None:intergenic | 25.0% |
! | AAACCATTAGACTGTTAATT+TGG | + | chr7.2:6322781-6322800 | MS.gene07095:intron | 25.0% |
! | AATTCTTGATTGTTATGCAT+TGG | + | chr7.2:6322681-6322700 | MS.gene07095:intron | 25.0% |
! | ACAAAATAAGAAATCGGATA+AGG | + | chr7.2:6319949-6319968 | MS.gene07095:CDS | 25.0% |
! | ACCGAACAAACAATAAATAT+CGG | + | chr7.2:6320587-6320606 | MS.gene07095:CDS | 25.0% |
! | AGTACAAAATACTAACCTAA+TGG | - | chr7.2:6320613-6320632 | None:intergenic | 25.0% |
! | CATAATAGTATTTGAAGGAA+AGG | - | chr7.2:6321763-6321782 | None:intergenic | 25.0% |
! | CATTTAGTGATAAAGAATCA+TGG | + | chr7.2:6319819-6319838 | MS.gene07095:CDS | 25.0% |
! | CTTTAGTCATTTCAACATTA+TGG | + | chr7.2:6321589-6321608 | MS.gene07095:CDS | 25.0% |
! | TGAAAATTCAGTTATTGATG+CGG | + | chr7.2:6319778-6319797 | MS.gene07095:CDS | 25.0% |
! | TGAAATTTGAATGAATGTTC+TGG | + | chr7.2:6320660-6320679 | MS.gene07095:intron | 25.0% |
! | TGAATAAATGAAAAGCAAGA+TGG | - | chr7.2:6321728-6321747 | None:intergenic | 25.0% |
! | TGATGCTTTAACTAAAAAAG+CGG | + | chr7.2:6322614-6322633 | MS.gene07095:intron | 25.0% |
! | TTCCTTCAAATACTATTATG+AGG | + | chr7.2:6321763-6321782 | MS.gene07095:CDS | 25.0% |
! | TTTCGATGAGTTAACTAATT+TGG | + | chr7.2:6321322-6321341 | MS.gene07095:CDS | 25.0% |
!! | AGGTTTAGAATTTAATGTTC+TGG | + | chr7.2:6320762-6320781 | MS.gene07095:intron | 25.0% |
!! | TGTTGTATTTTGTTCTGATT+TGG | + | chr7.2:6321018-6321037 | MS.gene07095:intron | 25.0% |
!! | TTGGTTTGAATATTATCTTC+TGG | + | chr7.2:6322700-6322719 | MS.gene07095:intron | 25.0% |
!! | TTTTCAATTACTGAGTTAAG+TGG | + | chr7.2:6322858-6322877 | MS.gene07095:intron | 25.0% |
!!! | ATGTTGATAATGATAATGAG+AGG | + | chr7.2:6321864-6321883 | MS.gene07095:CDS | 25.0% |
!!! | CTTATTTTGTGAATTGTTCT+TGG | - | chr7.2:6319939-6319958 | None:intergenic | 25.0% |
!!! | GAATTTAATGTTCTGGTTTA+TGG | + | chr7.2:6320769-6320788 | MS.gene07095:intron | 25.0% |
!!! | GCTTTAATAAATTCTAAAGC+TGG | + | chr7.2:6320265-6320284 | MS.gene07095:CDS | 25.0% |
!!! | TGAAAAACTGTTTTAATGGA+AGG | + | chr7.2:6321396-6321415 | MS.gene07095:CDS | 25.0% |
!!! | TGTTGATAATGATAATGAGA+GGG | + | chr7.2:6321865-6321884 | MS.gene07095:CDS | 25.0% |
AAACACATATGATCTTTCCA+TGG | - | chr7.2:6320833-6320852 | None:intergenic | 30.0% | |
AACAAAGAAGGTTTCAAGAA+GGG | + | chr7.2:6319995-6320014 | MS.gene07095:CDS | 30.0% | |
AACAATAAATATCGGCCATT+AGG | + | chr7.2:6320595-6320614 | MS.gene07095:CDS | 30.0% | |
AAGAAAGACCAAATCCAATT+AGG | + | chr7.2:6322443-6322462 | MS.gene07095:CDS | 30.0% | |
AATCAGATTTCGACTACAAT+TGG | + | chr7.2:6321363-6321382 | MS.gene07095:CDS | 30.0% | |
AGAACATCTTATGAAGTGAT+GGG | + | chr7.2:6320298-6320317 | MS.gene07095:CDS | 30.0% | |
ATATTAACTTCATCTGAGAG+TGG | + | chr7.2:6319743-6319762 | MS.gene07095:CDS | 30.0% | |
ATCAGATTTCGACTACAATT+GGG | + | chr7.2:6321364-6321383 | MS.gene07095:CDS | 30.0% | |
ATGATTGTCAAAACCAAGAA+AGG | - | chr7.2:6321057-6321076 | None:intergenic | 30.0% | |
ATTATGATCTTCAAACCTTG+GGG | - | chr7.2:6321936-6321955 | None:intergenic | 30.0% | |
CAACAAGATTATGCTCTATT+TGG | + | chr7.2:6320538-6320557 | MS.gene07095:CDS | 30.0% | |
CGTTATGTTTGTAACAAAGA+AGG | + | chr7.2:6319983-6320002 | MS.gene07095:CDS | 30.0% | |
CTCCTCATAATAGTATTTGA+AGG | - | chr7.2:6321768-6321787 | None:intergenic | 30.0% | |
CTGGTATATGTGTGTTAATT+TGG | + | chr7.2:6320699-6320718 | MS.gene07095:intron | 30.0% | |
CTTCAAATACTATTATGAGG+AGG | + | chr7.2:6321766-6321785 | MS.gene07095:CDS | 30.0% | |
GAGAATGCAAAGAAAAATCT+CGG | + | chr7.2:6321278-6321297 | MS.gene07095:CDS | 30.0% | |
GATTATGATCTTCAAACCTT+GGG | - | chr7.2:6321937-6321956 | None:intergenic | 30.0% | |
GCCGATATTTATTGTTTGTT+CGG | - | chr7.2:6320591-6320610 | None:intergenic | 30.0% | |
TAAAGAAAAACCAGAGGAAA+GGG | + | chr7.2:6320084-6320103 | MS.gene07095:CDS | 30.0% | |
TAAAGAATCATGGAAGTCTT+TGG | + | chr7.2:6319829-6319848 | MS.gene07095:CDS | 30.0% | |
TAAAGAATCGAACAAGTGAA+TGG | - | chr7.2:6321574-6321593 | None:intergenic | 30.0% | |
TAACAAAGAAGGTTTCAAGA+AGG | + | chr7.2:6319994-6320013 | MS.gene07095:CDS | 30.0% | |
TGGATATCATAGTAAAAACC+TGG | - | chr7.2:6320466-6320485 | None:intergenic | 30.0% | |
TGGTGTATACTTGTTTACTA+CGG | - | chr7.2:6321708-6321727 | None:intergenic | 30.0% | |
TTCTTTGACCTAATTGGATT+TGG | - | chr7.2:6322454-6322473 | None:intergenic | 30.0% | |
TTTAAGTCCGAAAATCGAAA+AGG | - | chr7.2:6320352-6320371 | None:intergenic | 30.0% | |
TTTCTATTTACACAGCACAA+TGG | + | chr7.2:6320977-6320996 | MS.gene07095:intron | 30.0% | |
! | AAATGCTCTGGTTTATGTAA+TGG | - | chr7.2:6320196-6320215 | None:intergenic | 30.0% |
! | AGCTGGAATATATTTGAAGT+TGG | + | chr7.2:6320117-6320136 | MS.gene07095:CDS | 30.0% |
! | CAAAGTTTTCACAATTGAGA+AGG | + | chr7.2:6321823-6321842 | MS.gene07095:CDS | 30.0% |
! | GAATCTTCCTTTTCGATTTT+CGG | + | chr7.2:6320342-6320361 | MS.gene07095:CDS | 30.0% |
! | GCATCTGAAATATTTCTCAA+CGG | + | chr7.2:6322280-6322299 | MS.gene07095:CDS | 30.0% |
! | TATGGTTTGAGGTTTCTTAT+TGG | - | chr7.2:6321171-6321190 | None:intergenic | 30.0% |
! | TCAATTCCGAATGTTTTTCA+AGG | + | chr7.2:6321221-6321240 | MS.gene07095:CDS | 30.0% |
! | TCAGTTTTCAATTCAATGAG+TGG | - | chr7.2:6323002-6323021 | None:intergenic | 30.0% |
! | TGAGGCTTTAACAAATTAAG+CGG | + | chr7.2:6322552-6322571 | MS.gene07095:intron | 30.0% |
! | TTTGGTCTTTCTTTGAACTT+TGG | - | chr7.2:6322436-6322455 | None:intergenic | 30.0% |
!! | ACATGTTTTCAAGATTTTGG+AGG | + | chr7.2:6322048-6322067 | MS.gene07095:CDS | 30.0% |
!! | ATCATAATCGACTTGATGAA+AGG | + | chr7.2:6321948-6321967 | MS.gene07095:CDS | 30.0% |
!! | ATGTTCTGGTTTAGAATTGA+AGG | + | chr7.2:6320674-6320693 | MS.gene07095:intron | 30.0% |
!! | GAGGAGTTTCTTATTTCTAA+AGG | + | chr7.2:6322328-6322347 | MS.gene07095:CDS | 30.0% |
!! | TCATAATCGACTTGATGAAA+GGG | + | chr7.2:6321949-6321968 | MS.gene07095:CDS | 30.0% |
!! | TCGACATGTTTTCAAGATTT+TGG | + | chr7.2:6322045-6322064 | MS.gene07095:CDS | 30.0% |
!!! | AAGACATAGCCAGTATTTTT+TGG | + | chr7.2:6320500-6320519 | MS.gene07095:CDS | 30.0% |
!!! | AGACATAGCCAGTATTTTTT+GGG | + | chr7.2:6320501-6320520 | MS.gene07095:CDS | 30.0% |
!!! | CTGCACAATATGTTTTAAAG+CGG | + | chr7.2:6322113-6322132 | MS.gene07095:CDS | 30.0% |
!!! | GTTTTTCAAGGTGTTTTTCA+TGG | + | chr7.2:6321233-6321252 | MS.gene07095:CDS | 30.0% |
ACATTATGGTTCAGAGAATG+AGG | + | chr7.2:6321603-6321622 | MS.gene07095:CDS | 35.0% | |
ATAACACTGGATTCTCTGTT+AGG | + | chr7.2:6319900-6319919 | MS.gene07095:CDS | 35.0% | |
CATAAATTCCAAGGCAAGAT+AGG | - | chr7.2:6320800-6320819 | None:intergenic | 35.0% | |
CATTATGGTTCAGAGAATGA+GGG | + | chr7.2:6321604-6321623 | MS.gene07095:CDS | 35.0% | |
CGAGAAGTAAATGAAGTTCA+AGG | + | chr7.2:6320235-6320254 | MS.gene07095:CDS | 35.0% | |
CGATTATGATCTTCAAACCT+TGG | - | chr7.2:6321938-6321957 | None:intergenic | 35.0% | |
CTAAAGAAAAACCAGAGGAA+AGG | + | chr7.2:6320083-6320102 | MS.gene07095:CDS | 35.0% | |
CTCATTCAAATCGTATGCAT+TGG | + | chr7.2:6321450-6321469 | MS.gene07095:CDS | 35.0% | |
GAAAGCTAAAGAAAAACCAG+AGG | + | chr7.2:6320078-6320097 | MS.gene07095:CDS | 35.0% | |
GAAGCAAAAGAAAGATGATG+AGG | + | chr7.2:6322534-6322553 | MS.gene07095:intron | 35.0% | |
GACAGAAATTCCTTATAGCT+CGG | + | chr7.2:6322509-6322528 | MS.gene07095:intron | 35.0% | |
GAGAACATCTTATGAAGTGA+TGG | + | chr7.2:6320297-6320316 | MS.gene07095:CDS | 35.0% | |
GTCTGCTTAATCCTAAAAAC+AGG | + | chr7.2:6320020-6320039 | MS.gene07095:CDS | 35.0% | |
TCTAATGACAACTCGTCAAA+AGG | + | chr7.2:6320378-6320397 | MS.gene07095:CDS | 35.0% | |
TGTACAGAGCATAAATTCCA+AGG | - | chr7.2:6320809-6320828 | None:intergenic | 35.0% | |
TTCTCATACTCAACAAGAAC+TGG | - | chr7.2:6320061-6320080 | None:intergenic | 35.0% | |
! | CATCGTAAGAGTGTGTTATT+TGG | + | chr7.2:6321074-6321093 | MS.gene07095:CDS | 35.0% |
! | GAGGCTTTAACAAATTAAGC+GGG | + | chr7.2:6322553-6322572 | MS.gene07095:intron | 35.0% |
! | GGTTTCGAATGTTGATGTTT+TGG | + | chr7.2:6321886-6321905 | MS.gene07095:CDS | 35.0% |
! | TCTTTCAATGCTTTTCTTCG+TGG | + | chr7.2:6321533-6321552 | MS.gene07095:CDS | 35.0% |
! | TGGTTTAGAATTGAAGGTTC+TGG | + | chr7.2:6320680-6320699 | MS.gene07095:intron | 35.0% |
! | TTTTAATGGAAGGCCTACTT+CGG | + | chr7.2:6321406-6321425 | MS.gene07095:CDS | 35.0% |
! | TTTTTCATGGTCTTTGCTCA+TGG | + | chr7.2:6321246-6321265 | MS.gene07095:CDS | 35.0% |
!! | ACTGCTTTTGAAGACTTAGA+AGG | - | chr7.2:6322382-6322401 | None:intergenic | 35.0% |
!! | CGCTTTAAAACATATTGTGC+AGG | - | chr7.2:6322115-6322134 | None:intergenic | 35.0% |
!! | TATGCATTGGTCTTCAGTTT+GGG | + | chr7.2:6321463-6321482 | MS.gene07095:CDS | 35.0% |
!! | TTCAAGATTTTGGAGGTCTT+AGG | + | chr7.2:6322055-6322074 | MS.gene07095:CDS | 35.0% |
!!! | AGACATCAGCTACTTTTGAT+TGG | + | chr7.2:6321117-6321136 | MS.gene07095:CDS | 35.0% |
!!! | CACAATATGTTTTAAAGCGG+TGG | + | chr7.2:6322116-6322135 | MS.gene07095:CDS | 35.0% |
AATCGAACAAGTGAATGGTC+TGG | - | chr7.2:6321569-6321588 | None:intergenic | 40.0% | |
ACCTATGATCTTTGCATAGC+TGG | - | chr7.2:6320927-6320946 | None:intergenic | 40.0% | |
AGTCGCTTCTTTGACCTAAT+TGG | - | chr7.2:6322460-6322479 | None:intergenic | 40.0% | |
ATCTGAGAGTGGACAATTGA+CGG | + | chr7.2:6319754-6319773 | MS.gene07095:CDS | 40.0% | |
ATGAGGAGGACACAACAAAA+GGG | + | chr7.2:6321780-6321799 | MS.gene07095:CDS | 40.0% | |
ATGTCGTATGTTTGAGAACC+GGG | + | chr7.2:6322012-6322031 | MS.gene07095:CDS | 40.0% | |
ATTTATGCTCTGTACAGCCA+TGG | + | chr7.2:6320813-6320832 | MS.gene07095:intron | 40.0% | |
ATTTCTCAACGGTGTTCTTG+AGG | + | chr7.2:6322291-6322310 | MS.gene07095:CDS | 40.0% | |
CATGTCGTATGTTTGAGAAC+CGG | + | chr7.2:6322011-6322030 | MS.gene07095:CDS | 40.0% | |
CTGAAATCCACCATGAATGT+TGG | + | chr7.2:6322169-6322188 | MS.gene07095:CDS | 40.0% | |
GATTTCAGCTTATCGACAGA+CGG | - | chr7.2:6322157-6322176 | None:intergenic | 40.0% | |
GTCAATTCTGATGTAATGCG+CGG | + | chr7.2:6322945-6322964 | MS.gene07095:intron | 40.0% | |
GTCTTTAGTGCCAACATTCA+TGG | - | chr7.2:6322182-6322201 | None:intergenic | 40.0% | |
TATGAGGAGGACACAACAAA+AGG | + | chr7.2:6321779-6321798 | MS.gene07095:CDS | 40.0% | |
TCAAACCATATACACAGACC+AGG | + | chr7.2:6321181-6321200 | MS.gene07095:CDS | 40.0% | |
TCCAGCTATGCAAAGATCAT+AGG | + | chr7.2:6320923-6320942 | MS.gene07095:intron | 40.0% | |
TCCATCTGCCCAAAAAATAC+TGG | - | chr7.2:6320512-6320531 | None:intergenic | 40.0% | |
TGGTCTGTGTATATGGTTTG+AGG | - | chr7.2:6321182-6321201 | None:intergenic | 40.0% | |
TTCATTTCAGCTGCCTTTCT+TGG | + | chr7.2:6321041-6321060 | MS.gene07095:intron | 40.0% | |
TTGAAGAAAACCTTTCCCCA+AGG | + | chr7.2:6321918-6321937 | MS.gene07095:CDS | 40.0% | |
TTTAGTGCCAACATTCATGG+TGG | - | chr7.2:6322179-6322198 | None:intergenic | 40.0% | |
TTTGCTTCTTCCGAGCTATA+AGG | - | chr7.2:6322522-6322541 | None:intergenic | 40.0% | |
! | TCATGCTGAGTTGGACTTTA+AGG | + | chr7.2:6321631-6321650 | MS.gene07095:CDS | 40.0% |
! | TGAAGACTTAGAAGGCGTAA+CGG | - | chr7.2:6322374-6322393 | None:intergenic | 40.0% |
!! | AAGATTTTGGAGGTCTTAGG+TGG | + | chr7.2:6322058-6322077 | MS.gene07095:CDS | 40.0% |
!! | GTATGCATTGGTCTTCAGTT+TGG | + | chr7.2:6321462-6321481 | MS.gene07095:CDS | 40.0% |
!! | TCACATGTTGGCCTGTTTTT+AGG | - | chr7.2:6320034-6320053 | None:intergenic | 40.0% |
!! | TCTTATGAAGTGATGGGTCA+AGG | + | chr7.2:6320304-6320323 | MS.gene07095:CDS | 40.0% |
AACTCGTCAAAAGGAGATGG+TGG | + | chr7.2:6320387-6320406 | MS.gene07095:CDS | 45.0% | |
AATGAAGCTCTCTCGAAACC+AGG | + | chr7.2:6320445-6320464 | MS.gene07095:CDS | 45.0% | |
AGAACTGGACTGTCACATGT+TGG | - | chr7.2:6320046-6320065 | None:intergenic | 45.0% | |
AGCCACTTAAAGTCCGAAGT+AGG | - | chr7.2:6321422-6321441 | None:intergenic | 45.0% | |
ATCCCAACAGTCAGCTTATG+CGG | + | chr7.2:6321681-6321700 | MS.gene07095:CDS | 45.0% | |
CATGTCGACATAAGAAACCC+CGG | - | chr7.2:6322033-6322052 | None:intergenic | 45.0% | |
CTCAAGTAGCACAAATGCTC+TGG | - | chr7.2:6320208-6320227 | None:intergenic | 45.0% | |
CTGTCTGTGAACCATCTGTT+GGG | + | chr7.2:6322404-6322423 | MS.gene07095:CDS | 45.0% | |
GAAAAACCAGAGGAAAGGGT+TGG | + | chr7.2:6320088-6320107 | MS.gene07095:CDS | 45.0% | |
GACAACTCGTCAAAAGGAGA+TGG | + | chr7.2:6320384-6320403 | MS.gene07095:CDS | 45.0% | |
GAGGGATAATCATGCTGAGT+TGG | + | chr7.2:6321622-6321641 | MS.gene07095:CDS | 45.0% | |
GATCTTCAAACCTTGGGGAA+AGG | - | chr7.2:6321931-6321950 | None:intergenic | 45.0% | |
TGTCGTATGTTTGAGAACCG+GGG | + | chr7.2:6322013-6322032 | MS.gene07095:CDS | 45.0% | |
TGTCTTCTGCAGCATCAACT+TGG | - | chr7.2:6320486-6320505 | None:intergenic | 45.0% | |
TGTTCTTGAGGCAGGGAAAA+AGG | + | chr7.2:6322303-6322322 | MS.gene07095:CDS | 45.0% | |
TTACAACCAACCCTTTCCTC+TGG | - | chr7.2:6320097-6320116 | None:intergenic | 45.0% | |
TTGATATCGTTGCGCTTCAG+TGG | - | chr7.2:6322206-6322225 | None:intergenic | 45.0% | |
! | GTGAGGTCACATTTTACAGC+TGG | + | chr7.2:6321485-6321504 | MS.gene07095:CDS | 45.0% |
!! | ATTGGTCTTCAGTTTGGGTG+AGG | + | chr7.2:6321468-6321487 | MS.gene07095:CDS | 45.0% |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | + | chr7.2:6320100-6320119 | MS.gene07095:CDS | 45.0% |
!!! | GCCAGTATTTTTTGGGCAGA+TGG | + | chr7.2:6320508-6320527 | MS.gene07095:CDS | 45.0% |
ACCAGCCTGGTCTGTGTATA+TGG | - | chr7.2:6321189-6321208 | None:intergenic | 50.0% | |
ACCATATACACAGACCAGGC+TGG | + | chr7.2:6321185-6321204 | MS.gene07095:CDS | 50.0% | |
AGGGTTGTCACAGTCGACAT+TGG | + | chr7.2:6321968-6321987 | MS.gene07095:CDS | 50.0% | |
GACCGCATAAGCTGACTGTT+GGG | - | chr7.2:6321686-6321705 | None:intergenic | 50.0% | |
GCTGTCTGTGAACCATCTGT+TGG | + | chr7.2:6322403-6322422 | MS.gene07095:CDS | 50.0% | |
GGCCTACTTCGGACTTTAAG+TGG | + | chr7.2:6321417-6321436 | MS.gene07095:CDS | 50.0% | |
GGGTTGTCACAGTCGACATT+GGG | + | chr7.2:6321969-6321988 | MS.gene07095:CDS | 50.0% | |
GGTCTTTGCTCATGGCACAT+GGG | + | chr7.2:6321254-6321273 | MS.gene07095:CDS | 50.0% | |
TACACGTGTTTGCGCAGATG+CGG | + | chr7.2:6322255-6322274 | MS.gene07095:CDS | 50.0% | |
TCAACGGTGTTCTTGAGGCA+GGG | + | chr7.2:6322296-6322315 | MS.gene07095:CDS | 50.0% | |
TGGGTGATCCTATCTTGCCT+TGG | + | chr7.2:6320789-6320808 | MS.gene07095:intron | 50.0% | |
TGGTCTTTGCTCATGGCACA+TGG | + | chr7.2:6321253-6321272 | MS.gene07095:CDS | 50.0% | |
! | TTTGGTGCAGTCCCAACAGA+TGG | - | chr7.2:6322418-6322437 | None:intergenic | 50.0% |
!! | GAAGTGATGGGTCAAGGAGT+TGG | + | chr7.2:6320310-6320329 | MS.gene07095:CDS | 50.0% |
ACTTCAACAACGCACCAGCC+TGG | - | chr7.2:6321202-6321221 | None:intergenic | 55.0% | |
CTCAACGGTGTTCTTGAGGC+AGG | + | chr7.2:6322295-6322314 | MS.gene07095:CDS | 55.0% | |
GGACCGCATAAGCTGACTGT+TGG | - | chr7.2:6321687-6321706 | None:intergenic | 55.0% | |
TGAGGCAGGGAAAAAGGCAG+AGG | + | chr7.2:6322309-6322328 | MS.gene07095:CDS | 55.0% | |
! | CGTCAAAAGGAGATGGTGGC+TGG | + | chr7.2:6320391-6320410 | MS.gene07095:CDS | 55.0% |
!! | GTGATGGGTCAAGGAGTTGG+AGG | + | chr7.2:6320313-6320332 | MS.gene07095:CDS | 55.0% |
ACGTGTTTGCGCAGATGCGG+AGG | + | chr7.2:6322258-6322277 | MS.gene07095:CDS | 60.0% | |
GGGTCAAGGAGTTGGAGGCA+CGG | + | chr7.2:6320318-6320337 | MS.gene07095:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 6319734 | 6323088 | 6319734 | ID=MS.gene07095 |
chr7.2 | mRNA | 6319734 | 6323088 | 6319734 | ID=MS.gene07095.t1;Parent=MS.gene07095 |
chr7.2 | exon | 6319734 | 6320616 | 6319734 | ID=MS.gene07095.t1.exon1;Parent=MS.gene07095.t1 |
chr7.2 | CDS | 6319734 | 6320616 | 6319734 | ID=cds.MS.gene07095.t1;Parent=MS.gene07095.t1 |
chr7.2 | exon | 6321051 | 6322484 | 6321051 | ID=MS.gene07095.t1.exon2;Parent=MS.gene07095.t1 |
chr7.2 | CDS | 6321051 | 6322484 | 6321051 | ID=cds.MS.gene07095.t1;Parent=MS.gene07095.t1 |
chr7.2 | exon | 6323069 | 6323088 | 6323069 | ID=MS.gene07095.t1.exon3;Parent=MS.gene07095.t1 |
chr7.2 | CDS | 6323069 | 6323088 | 6323069 | ID=cds.MS.gene07095.t1;Parent=MS.gene07095.t1 |
Gene Sequence |
Protein sequence |