Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071025.t1 | XP_024626741.1 | 91.2 | 272 | 23 | 1 | 1 | 272 | 1 | 271 | 1.60E-134 | 488.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071025.t1 | Q39262 | 41.8 | 98 | 48 | 4 | 82 | 179 | 57 | 145 | 2.0e-08 | 61.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071025.t1 | A0A396H587 | 56.8 | 280 | 90 | 7 | 20 | 272 | 1 | 276 | 1.6e-67 | 265.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene071025.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071025.t1 | MTR_1g013130 | 39.200 | 125 | 61 | 5 | 63 | 179 | 76 | 193 | 1.82e-12 | 66.2 |
| MS.gene071025.t1 | MTR_3g011990 | 43.678 | 87 | 32 | 3 | 67 | 146 | 72 | 148 | 1.95e-11 | 63.5 |
| MS.gene071025.t1 | MTR_3g012010 | 49.254 | 67 | 27 | 1 | 66 | 125 | 71 | 137 | 2.10e-11 | 63.5 |
| MS.gene071025.t1 | MTR_8g466760 | 46.667 | 75 | 27 | 3 | 77 | 148 | 86 | 150 | 3.81e-11 | 62.8 |
| MS.gene071025.t1 | MTR_7g026977 | 36.111 | 108 | 60 | 2 | 26 | 126 | 83 | 188 | 5.97e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071025.t1 | AT5G10970 | 39.837 | 123 | 48 | 6 | 63 | 179 | 84 | 186 | 1.31e-11 | 63.9 |
| MS.gene071025.t1 | AT5G25160 | 41.837 | 98 | 48 | 4 | 82 | 179 | 57 | 145 | 1.74e-11 | 63.2 |
| MS.gene071025.t1 | AT1G80730 | 68.293 | 41 | 11 | 1 | 78 | 118 | 60 | 98 | 5.28e-11 | 61.6 |
Find 81 sgRNAs with CRISPR-Local
Find 89 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACCAATGCCTTTCCTTCT+TGG | 0.138422 | 7.3:+34944013 | MS.gene071025:CDS |
| TTTGATTTCGACTCTAATTT+TGG | 0.159297 | 7.3:-34943601 | None:intergenic |
| TGAATTATGCCTTCTCTATT+AGG | 0.184623 | 7.3:-34944288 | None:intergenic |
| CCCCAAGCAACAACACAATT+TGG | 0.187401 | 7.3:+34944123 | MS.gene071025:CDS |
| TCTTGGCTCGGTTCACCTTA+TGG | 0.231125 | 7.3:+34944030 | MS.gene071025:CDS |
| TGGTGTGAGTGCCAAGTCTT+AGG | 0.231168 | 7.3:-34943681 | None:intergenic |
| CGGGTTGCAAAGGGTGTATT+TGG | 0.256836 | 7.3:-34944075 | None:intergenic |
| CCCAAATTGTGTTGTTGCTT+GGG | 0.273537 | 7.3:-34944124 | None:intergenic |
| GTTGTTGCTTGGGGTGAATT+TGG | 0.275394 | 7.3:-34944114 | None:intergenic |
| CCCAAAGTGTTTGACCTTTG+TGG | 0.286115 | 7.3:-34944192 | None:intergenic |
| GTTCACGCTTATGAGCATTT+TGG | 0.317761 | 7.3:-34943852 | None:intergenic |
| AGGTCAAACACTTTGGGTTT+GGG | 0.338136 | 7.3:+34944198 | MS.gene071025:CDS |
| CCACAAAGGTCAAACACTTT+GGG | 0.340923 | 7.3:+34944192 | MS.gene071025:CDS |
| GTGTTTGACCTTTGTGGAAT+TGG | 0.343209 | 7.3:-34944186 | None:intergenic |
| AAGGTCAAACACTTTGGGTT+TGG | 0.344659 | 7.3:+34944197 | MS.gene071025:CDS |
| CAAGGGTTTGGAAGTGGACT+TGG | 0.360530 | 7.3:-34943701 | None:intergenic |
| GTCACATATTGGACGCCAAT+TGG | 0.375665 | 7.3:-34943994 | None:intergenic |
| TCCCAAATTGTGTTGTTGCT+TGG | 0.377648 | 7.3:-34944125 | None:intergenic |
| TTCTCCACTTCTCAAGCTCT+TGG | 0.384550 | 7.3:+34943823 | MS.gene071025:CDS |
| TAGAAACCTCAAACGCAAAA+TGG | 0.385914 | 7.3:+34943570 | MS.gene071025:CDS |
| TCCACCGTTCTCCAAGGGTT+TGG | 0.389944 | 7.3:-34943713 | None:intergenic |
| CACCTTATGGTGGCTATGGA+GGG | 0.398816 | 7.3:+34944043 | MS.gene071025:CDS |
| GAAAGGCATTGGTCACATAT+TGG | 0.406502 | 7.3:-34944005 | None:intergenic |
| TAATAGAGAAGGCATAATTC+AGG | 0.407241 | 7.3:+34944290 | MS.gene071025:CDS |
| CCCAAGCAACAACACAATTT+GGG | 0.410223 | 7.3:+34944124 | MS.gene071025:CDS |
| TCCACAAAGGTCAAACACTT+TGG | 0.411221 | 7.3:+34944191 | MS.gene071025:CDS |
| TTAGGATCACGAGATAATAA+TGG | 0.420098 | 7.3:-34944270 | None:intergenic |
| ACCACTTTCTGCTCAGGTAA+AGG | 0.442903 | 7.3:-34943769 | None:intergenic |
| TCAAGCTCTATTCACTATCA+AGG | 0.445678 | 7.3:+34943937 | MS.gene071025:CDS |
| AATGCCTTTCCTTCTTGGCT+CGG | 0.453136 | 7.3:+34944018 | MS.gene071025:CDS |
| TTGGCATTTGCATCACATAC+CGG | 0.471216 | 7.3:-34944095 | None:intergenic |
| GTTCTCCAAGGGTTTGGAAG+TGG | 0.473154 | 7.3:-34943707 | None:intergenic |
| TCACATATTGGACGCCAATT+GGG | 0.475144 | 7.3:-34943993 | None:intergenic |
| TCACCTTATGGTGGCTATGG+AGG | 0.475493 | 7.3:+34944042 | MS.gene071025:CDS |
| TCCACTTCTCAAGCTCTTGG+AGG | 0.477317 | 7.3:+34943826 | MS.gene071025:CDS |
| GCTAACTTGCACAACCCAAT+TGG | 0.486494 | 7.3:+34943979 | MS.gene071025:CDS |
| GGTGTGAGTGCCAAGTCTTA+GGG | 0.491546 | 7.3:-34943680 | None:intergenic |
| TAAAAGGAGAGAGGAAGAGA+TGG | 0.501837 | 7.3:+34943897 | MS.gene071025:CDS |
| GGTTCACCTTATGGTGGCTA+TGG | 0.502207 | 7.3:+34944039 | MS.gene071025:CDS |
| AACTCTACCACTTTCTGCTC+AGG | 0.502340 | 7.3:-34943775 | None:intergenic |
| CCAAATTGTGTTGTTGCTTG+GGG | 0.502858 | 7.3:-34944123 | None:intergenic |
| AGTTGATGATGAGGAAACAT+TGG | 0.505069 | 7.3:-34944319 | None:intergenic |
| CAAGTCCACTTCCAAACCCT+TGG | 0.519689 | 7.3:+34943702 | MS.gene071025:CDS |
| GTTGATGATGAGGAAACATT+GGG | 0.520842 | 7.3:-34944318 | None:intergenic |
| TGATCAATGAAATTTCTTCG+AGG | 0.520979 | 7.3:-34944228 | None:intergenic |
| ATCACATACCGGGTTGCAAA+GGG | 0.522044 | 7.3:-34944084 | None:intergenic |
| ACCCCTCCATAGCCACCATA+AGG | 0.522093 | 7.3:-34944045 | None:intergenic |
| TGGCATTTGCATCACATACC+GGG | 0.531856 | 7.3:-34944094 | None:intergenic |
| TCTATCCTCATCATTTCCAA+TGG | 0.532227 | 7.3:-34943551 | None:intergenic |
| ATTTCCAATGGAAATTCTCT+CGG | 0.535410 | 7.3:-34943539 | None:intergenic |
| ACCTTATGGTGGCTATGGAG+GGG | 0.537456 | 7.3:+34944044 | MS.gene071025:CDS |
| ATTAGAGTCGAAATCAAAGA+AGG | 0.542585 | 7.3:+34943606 | MS.gene071025:CDS |
| CAAATACACCCTTTGCAACC+CGG | 0.543155 | 7.3:+34944076 | MS.gene071025:CDS |
| GAATAGAGCTTGAAAACCAT+AGG | 0.547197 | 7.3:-34943927 | None:intergenic |
| TCAACATCAGATTCAGAGGT+TGG | 0.549087 | 7.3:-34943646 | None:intergenic |
| TAGCACTACGGAAATATGAA+TGG | 0.550571 | 7.3:-34943960 | None:intergenic |
| AACCTCTGAATCTGATGTTG+AGG | 0.555993 | 7.3:+34943648 | MS.gene071025:CDS |
| ACCTCCAAGAGCTTGAGAAG+TGG | 0.556669 | 7.3:-34943827 | None:intergenic |
| AATGGAAGATAAAAGGAGAG+AGG | 0.557828 | 7.3:+34943888 | MS.gene071025:CDS |
| TGAATGTCCACCGTTCTCCA+AGG | 0.561681 | 7.3:-34943719 | None:intergenic |
| CATCACATACCGGGTTGCAA+AGG | 0.564146 | 7.3:-34944085 | None:intergenic |
| AAGAGATGGATTCAACCCTA+TGG | 0.564603 | 7.3:+34943911 | MS.gene071025:CDS |
| GAATGTCCACCGTTCTCCAA+GGG | 0.565536 | 7.3:-34943718 | None:intergenic |
| ACCTTTACCTGAGCAGAAAG+TGG | 0.574184 | 7.3:+34943768 | MS.gene071025:CDS |
| TAAGGTGAACCGAGCCAAGA+AGG | 0.575815 | 7.3:-34944027 | None:intergenic |
| TGAACCGAGCCAAGAAGGAA+AGG | 0.582959 | 7.3:-34944022 | None:intergenic |
| GAGCCAAGAAGGAAAGGCAT+TGG | 0.584408 | 7.3:-34944016 | None:intergenic |
| ATGTCCGAGAGAATTTCCAT+TGG | 0.586763 | 7.3:+34943535 | MS.gene071025:CDS |
| AATAGAGCTTGAAAACCATA+GGG | 0.593787 | 7.3:-34943926 | None:intergenic |
| ATCCTCAACATCAGATTCAG+AGG | 0.595365 | 7.3:-34943650 | None:intergenic |
| TCTCGTGATCCTAATAGAGA+AGG | 0.597683 | 7.3:+34944279 | MS.gene071025:CDS |
| AATTTCCATTGGAAATGATG+AGG | 0.604935 | 7.3:+34943546 | MS.gene071025:CDS |
| CCTCAAACGCAAAATGGTGG+AGG | 0.605406 | 7.3:+34943576 | MS.gene071025:CDS |
| GATTTACTAACCCTAAGACT+TGG | 0.606458 | 7.3:+34943670 | MS.gene071025:CDS |
| ACTTCCAAACCCTTGGAGAA+CGG | 0.610472 | 7.3:+34943709 | MS.gene071025:CDS |
| TGGCTCGGTTCACCTTATGG+TGG | 0.610898 | 7.3:+34944033 | MS.gene071025:CDS |
| AAACCTCAAACGCAAAATGG+TGG | 0.616518 | 7.3:+34943573 | MS.gene071025:CDS |
| GGTTGTGCAAGTTAGCACTA+CGG | 0.648362 | 7.3:-34943972 | None:intergenic |
| CGTTGATTGAGTTGATGATG+AGG | 0.655857 | 7.3:-34944328 | None:intergenic |
| TCCAAACCCTTGGAGAACGG+TGG | 0.656704 | 7.3:+34943712 | MS.gene071025:CDS |
| CTGCATTTCCAATTCCACAA+AGG | 0.667747 | 7.3:+34944178 | MS.gene071025:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAATGGAAGATAAA+AGG | + | chr7.3:34943881-34943900 | MS.gene071025:CDS | 15.0% |
| ! | TGAACGTGTCTTAAAAAAAA+TGG | + | chr7.3:34943870-34943889 | MS.gene071025:CDS | 25.0% |
| !!! | AATTTGGGATGACTAATTTT+TGG | + | chr7.3:34944139-34944158 | MS.gene071025:CDS | 25.0% |
| !!! | ATTTGGGATGACTAATTTTT+GGG | + | chr7.3:34944140-34944159 | MS.gene071025:CDS | 25.0% |
| !!! | TTTGATTTCGACTCTAATTT+TGG | - | chr7.3:34943604-34943623 | None:intergenic | 25.0% |
| AATAGAGCTTGAAAACCATA+GGG | - | chr7.3:34943929-34943948 | None:intergenic | 30.0% | |
| AATTTCCATTGGAAATGATG+AGG | + | chr7.3:34943546-34943565 | MS.gene071025:CDS | 30.0% | |
| ATTAGAGTCGAAATCAAAGA+AGG | + | chr7.3:34943606-34943625 | MS.gene071025:CDS | 30.0% | |
| ATTTCCAATGGAAATTCTCT+CGG | - | chr7.3:34943542-34943561 | None:intergenic | 30.0% | |
| TGAATTATGCCTTCTCTATT+AGG | - | chr7.3:34944291-34944310 | None:intergenic | 30.0% | |
| TGATCAATGAAATTTCTTCG+AGG | - | chr7.3:34944231-34944250 | None:intergenic | 30.0% | |
| TTAGGATCACGAGATAATAA+TGG | - | chr7.3:34944273-34944292 | None:intergenic | 30.0% | |
| ! | TAATAGAGAAGGCATAATTC+AGG | + | chr7.3:34944290-34944309 | MS.gene071025:CDS | 30.0% |
| !! | TTTGGGATGACTAATTTTTG+GGG | + | chr7.3:34944141-34944160 | MS.gene071025:CDS | 30.0% |
| AATGGAAGATAAAAGGAGAG+AGG | + | chr7.3:34943888-34943907 | MS.gene071025:CDS | 35.0% | |
| GAATAGAGCTTGAAAACCAT+AGG | - | chr7.3:34943930-34943949 | None:intergenic | 35.0% | |
| GATTTACTAACCCTAAGACT+TGG | + | chr7.3:34943670-34943689 | MS.gene071025:CDS | 35.0% | |
| TAGAAACCTCAAACGCAAAA+TGG | + | chr7.3:34943570-34943589 | MS.gene071025:CDS | 35.0% | |
| TAGCACTACGGAAATATGAA+TGG | - | chr7.3:34943963-34943982 | None:intergenic | 35.0% | |
| TCAAGCTCTATTCACTATCA+AGG | + | chr7.3:34943937-34943956 | MS.gene071025:CDS | 35.0% | |
| TCTATCCTCATCATTTCCAA+TGG | - | chr7.3:34943554-34943573 | None:intergenic | 35.0% | |
| !! | AGTTGATGATGAGGAAACAT+TGG | - | chr7.3:34944322-34944341 | None:intergenic | 35.0% |
| !! | GTTGATGATGAGGAAACATT+GGG | - | chr7.3:34944321-34944340 | None:intergenic | 35.0% |
| AAACCTCAAACGCAAAATGG+TGG | + | chr7.3:34943573-34943592 | MS.gene071025:CDS | 40.0% | |
| AACCTCTGAATCTGATGTTG+AGG | + | chr7.3:34943648-34943667 | MS.gene071025:CDS | 40.0% | |
| ATCCTCAACATCAGATTCAG+AGG | - | chr7.3:34943653-34943672 | None:intergenic | 40.0% | |
| ATGTCCGAGAGAATTTCCAT+TGG | + | chr7.3:34943535-34943554 | MS.gene071025:CDS | 40.0% | |
| CCACAAAGGTCAAACACTTT+GGG | + | chr7.3:34944192-34944211 | MS.gene071025:CDS | 40.0% | |
| CCCAAGCAACAACACAATTT+GGG | + | chr7.3:34944124-34944143 | MS.gene071025:CDS | 40.0% | |
| CTGCATTTCCAATTCCACAA+AGG | + | chr7.3:34944178-34944197 | MS.gene071025:CDS | 40.0% | |
| GTGTTTGACCTTTGTGGAAT+TGG | - | chr7.3:34944189-34944208 | None:intergenic | 40.0% | |
| TAAAAGGAGAGAGGAAGAGA+TGG | + | chr7.3:34943897-34943916 | MS.gene071025:CDS | 40.0% | |
| TCAACATCAGATTCAGAGGT+TGG | - | chr7.3:34943649-34943668 | None:intergenic | 40.0% | |
| TCACATATTGGACGCCAATT+GGG | - | chr7.3:34943996-34944015 | None:intergenic | 40.0% | |
| TCCACAAAGGTCAAACACTT+TGG | + | chr7.3:34944191-34944210 | MS.gene071025:CDS | 40.0% | |
| TCTCGTGATCCTAATAGAGA+AGG | + | chr7.3:34944279-34944298 | MS.gene071025:CDS | 40.0% | |
| TTGGCATTTGCATCACATAC+CGG | - | chr7.3:34944098-34944117 | None:intergenic | 40.0% | |
| ! | AAGAGATGGATTCAACCCTA+TGG | + | chr7.3:34943911-34943930 | MS.gene071025:CDS | 40.0% |
| ! | AAGGTCAAACACTTTGGGTT+TGG | + | chr7.3:34944197-34944216 | MS.gene071025:CDS | 40.0% |
| ! | AGGTCAAACACTTTGGGTTT+GGG | + | chr7.3:34944198-34944217 | MS.gene071025:CDS | 40.0% |
| ! | CCAAATTGTGTTGTTGCTTG+GGG | - | chr7.3:34944126-34944145 | None:intergenic | 40.0% |
| ! | CCCAAATTGTGTTGTTGCTT+GGG | - | chr7.3:34944127-34944146 | None:intergenic | 40.0% |
| ! | GTTCACGCTTATGAGCATTT+TGG | - | chr7.3:34943855-34943874 | None:intergenic | 40.0% |
| ! | TCCCAAATTGTGTTGTTGCT+TGG | - | chr7.3:34944128-34944147 | None:intergenic | 40.0% |
| !! | CGTTGATTGAGTTGATGATG+AGG | - | chr7.3:34944331-34944350 | None:intergenic | 40.0% |
| !! | GAAAGGCATTGGTCACATAT+TGG | - | chr7.3:34944008-34944027 | None:intergenic | 40.0% |
| !!! | ATGACTAATTTTTGGGGTGG+AGG | + | chr7.3:34944147-34944166 | MS.gene071025:CDS | 40.0% |
| AACTCTACCACTTTCTGCTC+AGG | - | chr7.3:34943778-34943797 | None:intergenic | 45.0% | |
| AATGCCTTTCCTTCTTGGCT+CGG | + | chr7.3:34944018-34944037 | MS.gene071025:CDS | 45.0% | |
| ACCACTTTCTGCTCAGGTAA+AGG | - | chr7.3:34943772-34943791 | None:intergenic | 45.0% | |
| ACCTTTACCTGAGCAGAAAG+TGG | + | chr7.3:34943768-34943787 | MS.gene071025:CDS | 45.0% | |
| ACTTCCAAACCCTTGGAGAA+CGG | + | chr7.3:34943709-34943728 | MS.gene071025:CDS | 45.0% | |
| ATCACATACCGGGTTGCAAA+GGG | - | chr7.3:34944087-34944106 | None:intergenic | 45.0% | |
| CAAATACACCCTTTGCAACC+CGG | + | chr7.3:34944076-34944095 | MS.gene071025:CDS | 45.0% | |
| CCCCAAGCAACAACACAATT+TGG | + | chr7.3:34944123-34944142 | MS.gene071025:CDS | 45.0% | |
| GGTTGTGCAAGTTAGCACTA+CGG | - | chr7.3:34943975-34943994 | None:intergenic | 45.0% | |
| GTCACATATTGGACGCCAAT+TGG | - | chr7.3:34943997-34944016 | None:intergenic | 45.0% | |
| TGACCAATGCCTTTCCTTCT+TGG | + | chr7.3:34944013-34944032 | MS.gene071025:CDS | 45.0% | |
| TGGCATTTGCATCACATACC+GGG | - | chr7.3:34944097-34944116 | None:intergenic | 45.0% | |
| TTCTCCACTTCTCAAGCTCT+TGG | + | chr7.3:34943823-34943842 | MS.gene071025:CDS | 45.0% | |
| ! | CCCAAAGTGTTTGACCTTTG+TGG | - | chr7.3:34944195-34944214 | None:intergenic | 45.0% |
| ! | GCTAACTTGCACAACCCAAT+TGG | + | chr7.3:34943979-34943998 | MS.gene071025:CDS | 45.0% |
| ! | GTTGTTGCTTGGGGTGAATT+TGG | - | chr7.3:34944117-34944136 | None:intergenic | 45.0% |
| !! | GGGATGACTAATTTTTGGGG+TGG | + | chr7.3:34944144-34944163 | MS.gene071025:CDS | 45.0% |
| ACCTCCAAGAGCTTGAGAAG+TGG | - | chr7.3:34943830-34943849 | None:intergenic | 50.0% | |
| ACCTTATGGTGGCTATGGAG+GGG | + | chr7.3:34944044-34944063 | MS.gene071025:CDS | 50.0% | |
| CAAGTCCACTTCCAAACCCT+TGG | + | chr7.3:34943702-34943721 | MS.gene071025:CDS | 50.0% | |
| CACCTTATGGTGGCTATGGA+GGG | + | chr7.3:34944043-34944062 | MS.gene071025:CDS | 50.0% | |
| CATCACATACCGGGTTGCAA+AGG | - | chr7.3:34944088-34944107 | None:intergenic | 50.0% | |
| CCTCAAACGCAAAATGGTGG+AGG | + | chr7.3:34943576-34943595 | MS.gene071025:CDS | 50.0% | |
| GAATGTCCACCGTTCTCCAA+GGG | - | chr7.3:34943721-34943740 | None:intergenic | 50.0% | |
| GGTGTGAGTGCCAAGTCTTA+GGG | - | chr7.3:34943683-34943702 | None:intergenic | 50.0% | |
| GGTTCACCTTATGGTGGCTA+TGG | + | chr7.3:34944039-34944058 | MS.gene071025:CDS | 50.0% | |
| GTTCTCCAAGGGTTTGGAAG+TGG | - | chr7.3:34943710-34943729 | None:intergenic | 50.0% | |
| TAAGGTGAACCGAGCCAAGA+AGG | - | chr7.3:34944030-34944049 | None:intergenic | 50.0% | |
| TCACCTTATGGTGGCTATGG+AGG | + | chr7.3:34944042-34944061 | MS.gene071025:CDS | 50.0% | |
| TCCACTTCTCAAGCTCTTGG+AGG | + | chr7.3:34943826-34943845 | MS.gene071025:CDS | 50.0% | |
| TGAACCGAGCCAAGAAGGAA+AGG | - | chr7.3:34944025-34944044 | None:intergenic | 50.0% | |
| TGAATGTCCACCGTTCTCCA+AGG | - | chr7.3:34943722-34943741 | None:intergenic | 50.0% | |
| TGGTGTGAGTGCCAAGTCTT+AGG | - | chr7.3:34943684-34943703 | None:intergenic | 50.0% | |
| ! | CAAGGGTTTGGAAGTGGACT+TGG | - | chr7.3:34943704-34943723 | None:intergenic | 50.0% |
| ! | CCTCCACCATTTTGCGTTTG+AGG | - | chr7.3:34943579-34943598 | None:intergenic | 50.0% |
| ! | CGGGTTGCAAAGGGTGTATT+TGG | - | chr7.3:34944078-34944097 | None:intergenic | 50.0% |
| ! | GAGCCAAGAAGGAAAGGCAT+TGG | - | chr7.3:34944019-34944038 | None:intergenic | 50.0% |
| !! | TCTTGGCTCGGTTCACCTTA+TGG | + | chr7.3:34944030-34944049 | MS.gene071025:CDS | 50.0% |
| ACCCCTCCATAGCCACCATA+AGG | - | chr7.3:34944048-34944067 | None:intergenic | 55.0% | |
| TCCAAACCCTTGGAGAACGG+TGG | + | chr7.3:34943712-34943731 | MS.gene071025:CDS | 55.0% | |
| TCCACCGTTCTCCAAGGGTT+TGG | - | chr7.3:34943716-34943735 | None:intergenic | 55.0% | |
| !! | TGGCTCGGTTCACCTTATGG+TGG | + | chr7.3:34944033-34944052 | MS.gene071025:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 34943535 | 34944353 | 34943535 | ID=MS.gene071025 |
| chr7.3 | mRNA | 34943535 | 34944353 | 34943535 | ID=MS.gene071025.t1;Parent=MS.gene071025 |
| chr7.3 | exon | 34943535 | 34944353 | 34943535 | ID=MS.gene071025.t1.exon1;Parent=MS.gene071025.t1 |
| chr7.3 | CDS | 34943535 | 34944353 | 34943535 | ID=cds.MS.gene071025.t1;Parent=MS.gene071025.t1 |
| Gene Sequence |
| Protein sequence |
