Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071026.t1 | XP_024626741.1 | 90.8 | 271 | 25 | 0 | 1 | 271 | 1 | 271 | 9.50E-135 | 489.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071026.t1 | Q39262 | 40.2 | 97 | 50 | 3 | 82 | 178 | 57 | 145 | 7.7e-08 | 59.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071026.t1 | A0A396H587 | 56.6 | 279 | 91 | 6 | 20 | 271 | 1 | 276 | 3.2e-68 | 268.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene071026.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071026.t1 | MTR_1g013130 | 35.374 | 147 | 67 | 6 | 63 | 209 | 76 | 194 | 4.60e-12 | 65.1 |
| MS.gene071026.t1 | MTR_3g011990 | 45.977 | 87 | 30 | 4 | 67 | 146 | 72 | 148 | 1.56e-11 | 63.9 |
| MS.gene071026.t1 | MTR_3g012010 | 49.254 | 67 | 27 | 1 | 66 | 125 | 71 | 137 | 1.85e-11 | 63.5 |
| MS.gene071026.t1 | MTR_8g466760 | 46.667 | 75 | 27 | 3 | 77 | 148 | 86 | 150 | 3.33e-11 | 62.8 |
| MS.gene071026.t1 | MTR_7g026977 | 36.111 | 108 | 60 | 2 | 26 | 126 | 83 | 188 | 5.32e-11 | 62.4 |
| MS.gene071026.t1 | MTR_3g065020 | 71.795 | 39 | 9 | 1 | 80 | 118 | 82 | 118 | 8.22e-11 | 60.8 |
| MS.gene071026.t1 | MTR_4g006575 | 31.034 | 145 | 80 | 4 | 88 | 228 | 69 | 197 | 8.58e-11 | 60.8 |
| MS.gene071026.t1 | MTR_4g006600 | 31.034 | 145 | 80 | 4 | 88 | 228 | 69 | 197 | 8.58e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071026.t1 | AT5G10970 | 41.935 | 124 | 43 | 7 | 63 | 178 | 84 | 186 | 4.58e-12 | 65.1 |
| MS.gene071026.t1 | AT5G25160 | 40.206 | 97 | 50 | 3 | 82 | 178 | 57 | 145 | 4.53e-11 | 61.6 |
| MS.gene071026.t1 | AT1G80730 | 68.293 | 41 | 11 | 1 | 78 | 118 | 60 | 98 | 4.73e-11 | 61.6 |
Find 80 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGATTTCGACTCTAATTT+TGG | 0.159297 | 7.3:-34939581 | None:intergenic |
| TGAATTATGCCTTCTCTATT+AGG | 0.177692 | 7.3:-34940265 | None:intergenic |
| CCCCAAGCAACAACACAATT+TGG | 0.187401 | 7.3:+34940100 | MS.gene071026:CDS |
| TGGTGTGAGTGCCAAGTCTT+AGG | 0.231168 | 7.3:-34939661 | None:intergenic |
| CCCAAATTGTGTTGTTGCTT+GGG | 0.273537 | 7.3:-34940101 | None:intergenic |
| GTTGTTGCTTGGGGTGAATT+TGG | 0.275394 | 7.3:-34940091 | None:intergenic |
| CCCAAAGTGTTTGACCTTTG+TGG | 0.277762 | 7.3:-34940169 | None:intergenic |
| AGGTCAAACACTTTGGGTTT+TGG | 0.290151 | 7.3:+34940175 | MS.gene071026:CDS |
| CAGGTTGCAAGGGGTGTATT+TGG | 0.297330 | 7.3:-34940052 | None:intergenic |
| GTTCACGCTTATGAGCATTT+TGG | 0.317761 | 7.3:-34939832 | None:intergenic |
| CCACAAAGGTCAAACACTTT+GGG | 0.340923 | 7.3:+34940169 | MS.gene071026:CDS |
| TTGGTCACATGGGCGCCAAT+TGG | 0.347934 | 7.3:-34939974 | None:intergenic |
| CAAGGGTTTGGAAGTGGACT+TGG | 0.360530 | 7.3:-34939681 | None:intergenic |
| GTGTTTGACCTTTGTGGAAT+TGG | 0.364677 | 7.3:-34940163 | None:intergenic |
| TCCCAAATTGTGTTGTTGCT+TGG | 0.377648 | 7.3:-34940102 | None:intergenic |
| TTCTCCACTTCTCAAGCTCT+TGG | 0.384550 | 7.3:+34939803 | MS.gene071026:CDS |
| TAGAAACCTCAAACGCAAAA+TGG | 0.385914 | 7.3:+34939550 | MS.gene071026:CDS |
| TCCACCGTTCTCCAAGGGTT+TGG | 0.389944 | 7.3:-34939693 | None:intergenic |
| GCTTGGCTCGGTTCACCATA+TGG | 0.400606 | 7.3:+34940007 | MS.gene071026:CDS |
| TAATAGAGAAGGCATAATTC+AGG | 0.407241 | 7.3:+34940267 | MS.gene071026:CDS |
| CCCAAGCAACAACACAATTT+GGG | 0.410223 | 7.3:+34940101 | MS.gene071026:CDS |
| TCCACAAAGGTCAAACACTT+TGG | 0.411221 | 7.3:+34940168 | MS.gene071026:CDS |
| CACCATATGGTGGCTATGGA+GGG | 0.414143 | 7.3:+34940020 | MS.gene071026:CDS |
| TGACCAATGTCTTTCCTGCT+TGG | 0.417465 | 7.3:+34939990 | MS.gene071026:CDS |
| TTAGGATCACGAGATAATAA+TGG | 0.420098 | 7.3:-34940247 | None:intergenic |
| TGGTCACATGGGCGCCAATT+GGG | 0.428506 | 7.3:-34939973 | None:intergenic |
| ACCACTTTCTGCTCAGGTAA+AGG | 0.442903 | 7.3:-34939749 | None:intergenic |
| TCAAGCTCTATTCACTATCA+AGG | 0.445678 | 7.3:+34939917 | MS.gene071026:CDS |
| AATGTCTTTCCTGCTTGGCT+CGG | 0.451878 | 7.3:+34939995 | MS.gene071026:CDS |
| TGATCAATGAAATTTCTTTG+AGG | 0.466939 | 7.3:-34940205 | None:intergenic |
| GTTCTCCAAGGGTTTGGAAG+TGG | 0.473154 | 7.3:-34939687 | None:intergenic |
| TCCACTTCTCAAGCTCTTGG+AGG | 0.477317 | 7.3:+34939806 | MS.gene071026:CDS |
| TCACCATATGGTGGCTATGG+AGG | 0.477975 | 7.3:+34940019 | MS.gene071026:CDS |
| GCTAACTTGCACAACCCAAT+TGG | 0.486494 | 7.3:+34939959 | MS.gene071026:CDS |
| ACCCCTCCATAGCCACCATA+TGG | 0.490038 | 7.3:-34940022 | None:intergenic |
| GGTGTGAGTGCCAAGTCTTA+GGG | 0.491546 | 7.3:-34939660 | None:intergenic |
| GGTTCACCATATGGTGGCTA+TGG | 0.499351 | 7.3:+34940016 | MS.gene071026:CDS |
| TAAAAGGAGAGAGGAAGAGA+TGG | 0.501837 | 7.3:+34939877 | MS.gene071026:CDS |
| AACTCTACCACTTTCTGCTC+AGG | 0.502340 | 7.3:-34939755 | None:intergenic |
| CCAAATTGTGTTGTTGCTTG+GGG | 0.502858 | 7.3:-34940100 | None:intergenic |
| CAAATACACCCCTTGCAACC+TGG | 0.503232 | 7.3:+34940053 | MS.gene071026:CDS |
| TGGCATTTGCATCACATACC+AGG | 0.518397 | 7.3:-34940071 | None:intergenic |
| CAAGTCCACTTCCAAACCCT+TGG | 0.519689 | 7.3:+34939682 | MS.gene071026:CDS |
| GTTGATGATGAGGACACATT+GGG | 0.531489 | 7.3:-34940295 | None:intergenic |
| TCTATCCTCATCATTTCCAA+TGG | 0.532227 | 7.3:-34939531 | None:intergenic |
| CAGGAAAGACATTGGTCACA+TGG | 0.533199 | 7.3:-34939985 | None:intergenic |
| ATTTCCAATGGAAATTCTCT+CGG | 0.535410 | 7.3:-34939519 | None:intergenic |
| TATGGTGAACCGAGCCAAGC+AGG | 0.538944 | 7.3:-34940004 | None:intergenic |
| GCATCACATACCAGGTTGCA+AGG | 0.542521 | 7.3:-34940063 | None:intergenic |
| ATTAGAGTCGAAATCAAAGA+AGG | 0.542585 | 7.3:+34939586 | MS.gene071026:CDS |
| GAATAGAGCTTGAAAACCAT+AGG | 0.547197 | 7.3:-34939907 | None:intergenic |
| TCAACATCAGATTCAGAGGT+TGG | 0.549087 | 7.3:-34939626 | None:intergenic |
| TAGCACTACGGAAATATGAA+TGG | 0.550571 | 7.3:-34939940 | None:intergenic |
| ACCATATGGTGGCTATGGAG+GGG | 0.551080 | 7.3:+34940021 | MS.gene071026:CDS |
| AACCTCTGAATCTGATGTTG+AGG | 0.555993 | 7.3:+34939628 | MS.gene071026:CDS |
| ACCTCCAAGAGCTTGAGAAG+TGG | 0.556669 | 7.3:-34939807 | None:intergenic |
| AATGGAAGATAAAAGGAGAG+AGG | 0.557828 | 7.3:+34939868 | MS.gene071026:CDS |
| TGAATGTCCACCGTTCTCCA+AGG | 0.561681 | 7.3:-34939699 | None:intergenic |
| AAGAGATGGATTCAACCCTA+TGG | 0.564603 | 7.3:+34939891 | MS.gene071026:CDS |
| GAATGTCCACCGTTCTCCAA+GGG | 0.565536 | 7.3:-34939698 | None:intergenic |
| ACCTTTACCTGAGCAGAAAG+TGG | 0.574184 | 7.3:+34939748 | MS.gene071026:CDS |
| ATGTCCGAGAGAATTTCCAT+TGG | 0.586763 | 7.3:+34939515 | MS.gene071026:CDS |
| CATCACATACCAGGTTGCAA+GGG | 0.588137 | 7.3:-34940062 | None:intergenic |
| AATAGAGCTTGAAAACCATA+GGG | 0.593787 | 7.3:-34939906 | None:intergenic |
| ATCCTCAACATCAGATTCAG+AGG | 0.595365 | 7.3:-34939630 | None:intergenic |
| AGTTGATGATGAGGACACAT+TGG | 0.595890 | 7.3:-34940296 | None:intergenic |
| TCTCGTGATCCTAATAGAGA+AGG | 0.597683 | 7.3:+34940256 | MS.gene071026:CDS |
| AATTTCCATTGGAAATGATG+AGG | 0.604935 | 7.3:+34939526 | MS.gene071026:CDS |
| CCTCAAACGCAAAATGGTGG+AGG | 0.605406 | 7.3:+34939556 | MS.gene071026:CDS |
| GATTTACTAACCCTAAGACT+TGG | 0.606458 | 7.3:+34939650 | MS.gene071026:CDS |
| ACTTCCAAACCCTTGGAGAA+CGG | 0.610472 | 7.3:+34939689 | MS.gene071026:CDS |
| AAACCTCAAACGCAAAATGG+TGG | 0.616518 | 7.3:+34939553 | MS.gene071026:CDS |
| GGTTGTGCAAGTTAGCACTA+CGG | 0.648362 | 7.3:-34939952 | None:intergenic |
| TCCAAACCCTTGGAGAACGG+TGG | 0.656704 | 7.3:+34939692 | MS.gene071026:CDS |
| GAGCCAAGCAGGAAAGACAT+TGG | 0.656849 | 7.3:-34939993 | None:intergenic |
| ATCACATACCAGGTTGCAAG+GGG | 0.662631 | 7.3:-34940061 | None:intergenic |
| AGGAAAGACATTGGTCACAT+GGG | 0.665048 | 7.3:-34939984 | None:intergenic |
| TGGCTCGGTTCACCATATGG+TGG | 0.670478 | 7.3:+34940010 | MS.gene071026:CDS |
| GGTTGATTGAGTTGATGATG+AGG | 0.677458 | 7.3:-34940305 | None:intergenic |
| CTGCATTGCCAATTCCACAA+AGG | 0.690145 | 7.3:+34940155 | MS.gene071026:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAATGGAAGATAAA+AGG | + | chr7.3:34939861-34939880 | MS.gene071026:CDS | 15.0% |
| ! | TGAACGTGTCTTAAAAAAAA+TGG | + | chr7.3:34939850-34939869 | MS.gene071026:CDS | 25.0% |
| ! | TGATCAATGAAATTTCTTTG+AGG | - | chr7.3:34940208-34940227 | None:intergenic | 25.0% |
| !!! | AATTTGGGATGACTAATTTT+TGG | + | chr7.3:34940116-34940135 | MS.gene071026:CDS | 25.0% |
| !!! | ATTTGGGATGACTAATTTTT+GGG | + | chr7.3:34940117-34940136 | MS.gene071026:CDS | 25.0% |
| !!! | TTTGATTTCGACTCTAATTT+TGG | - | chr7.3:34939584-34939603 | None:intergenic | 25.0% |
| AATAGAGCTTGAAAACCATA+GGG | - | chr7.3:34939909-34939928 | None:intergenic | 30.0% | |
| AATTTCCATTGGAAATGATG+AGG | + | chr7.3:34939526-34939545 | MS.gene071026:CDS | 30.0% | |
| ATTAGAGTCGAAATCAAAGA+AGG | + | chr7.3:34939586-34939605 | MS.gene071026:CDS | 30.0% | |
| ATTTCCAATGGAAATTCTCT+CGG | - | chr7.3:34939522-34939541 | None:intergenic | 30.0% | |
| TGAATTATGCCTTCTCTATT+AGG | - | chr7.3:34940268-34940287 | None:intergenic | 30.0% | |
| TTAGGATCACGAGATAATAA+TGG | - | chr7.3:34940250-34940269 | None:intergenic | 30.0% | |
| ! | TAATAGAGAAGGCATAATTC+AGG | + | chr7.3:34940267-34940286 | MS.gene071026:CDS | 30.0% |
| !! | TTTGGGATGACTAATTTTTG+GGG | + | chr7.3:34940118-34940137 | MS.gene071026:CDS | 30.0% |
| AATGGAAGATAAAAGGAGAG+AGG | + | chr7.3:34939868-34939887 | MS.gene071026:CDS | 35.0% | |
| GAATAGAGCTTGAAAACCAT+AGG | - | chr7.3:34939910-34939929 | None:intergenic | 35.0% | |
| GATTTACTAACCCTAAGACT+TGG | + | chr7.3:34939650-34939669 | MS.gene071026:CDS | 35.0% | |
| TAGAAACCTCAAACGCAAAA+TGG | + | chr7.3:34939550-34939569 | MS.gene071026:CDS | 35.0% | |
| TAGCACTACGGAAATATGAA+TGG | - | chr7.3:34939943-34939962 | None:intergenic | 35.0% | |
| TCAAGCTCTATTCACTATCA+AGG | + | chr7.3:34939917-34939936 | MS.gene071026:CDS | 35.0% | |
| TCTATCCTCATCATTTCCAA+TGG | - | chr7.3:34939534-34939553 | None:intergenic | 35.0% | |
| AAACCTCAAACGCAAAATGG+TGG | + | chr7.3:34939553-34939572 | MS.gene071026:CDS | 40.0% | |
| AACCTCTGAATCTGATGTTG+AGG | + | chr7.3:34939628-34939647 | MS.gene071026:CDS | 40.0% | |
| AGGAAAGACATTGGTCACAT+GGG | - | chr7.3:34939987-34940006 | None:intergenic | 40.0% | |
| ATCCTCAACATCAGATTCAG+AGG | - | chr7.3:34939633-34939652 | None:intergenic | 40.0% | |
| ATGTCCGAGAGAATTTCCAT+TGG | + | chr7.3:34939515-34939534 | MS.gene071026:CDS | 40.0% | |
| CCACAAAGGTCAAACACTTT+GGG | + | chr7.3:34940169-34940188 | MS.gene071026:CDS | 40.0% | |
| CCCAAGCAACAACACAATTT+GGG | + | chr7.3:34940101-34940120 | MS.gene071026:CDS | 40.0% | |
| GTGTTTGACCTTTGTGGAAT+TGG | - | chr7.3:34940166-34940185 | None:intergenic | 40.0% | |
| TAAAAGGAGAGAGGAAGAGA+TGG | + | chr7.3:34939877-34939896 | MS.gene071026:CDS | 40.0% | |
| TCAACATCAGATTCAGAGGT+TGG | - | chr7.3:34939629-34939648 | None:intergenic | 40.0% | |
| TCCACAAAGGTCAAACACTT+TGG | + | chr7.3:34940168-34940187 | MS.gene071026:CDS | 40.0% | |
| TCTCGTGATCCTAATAGAGA+AGG | + | chr7.3:34940256-34940275 | MS.gene071026:CDS | 40.0% | |
| ! | AAGAGATGGATTCAACCCTA+TGG | + | chr7.3:34939891-34939910 | MS.gene071026:CDS | 40.0% |
| ! | CCAAATTGTGTTGTTGCTTG+GGG | - | chr7.3:34940103-34940122 | None:intergenic | 40.0% |
| ! | CCCAAATTGTGTTGTTGCTT+GGG | - | chr7.3:34940104-34940123 | None:intergenic | 40.0% |
| ! | GTTCACGCTTATGAGCATTT+TGG | - | chr7.3:34939835-34939854 | None:intergenic | 40.0% |
| ! | TCCCAAATTGTGTTGTTGCT+TGG | - | chr7.3:34940105-34940124 | None:intergenic | 40.0% |
| !! | AGGTCAAACACTTTGGGTTT+TGG | + | chr7.3:34940175-34940194 | MS.gene071026:CDS | 40.0% |
| !! | AGTTGATGATGAGGACACAT+TGG | - | chr7.3:34940299-34940318 | None:intergenic | 40.0% |
| !! | GGTTGATTGAGTTGATGATG+AGG | - | chr7.3:34940308-34940327 | None:intergenic | 40.0% |
| !! | GTTGATGATGAGGACACATT+GGG | - | chr7.3:34940298-34940317 | None:intergenic | 40.0% |
| !!! | ATGACTAATTTTTGGGGTGG+AGG | + | chr7.3:34940124-34940143 | MS.gene071026:CDS | 40.0% |
| AACTCTACCACTTTCTGCTC+AGG | - | chr7.3:34939758-34939777 | None:intergenic | 45.0% | |
| AATGTCTTTCCTGCTTGGCT+CGG | + | chr7.3:34939995-34940014 | MS.gene071026:CDS | 45.0% | |
| ACCACTTTCTGCTCAGGTAA+AGG | - | chr7.3:34939752-34939771 | None:intergenic | 45.0% | |
| ACCTTTACCTGAGCAGAAAG+TGG | + | chr7.3:34939748-34939767 | MS.gene071026:CDS | 45.0% | |
| ACTTCCAAACCCTTGGAGAA+CGG | + | chr7.3:34939689-34939708 | MS.gene071026:CDS | 45.0% | |
| ATCACATACCAGGTTGCAAG+GGG | - | chr7.3:34940064-34940083 | None:intergenic | 45.0% | |
| CAGGAAAGACATTGGTCACA+TGG | - | chr7.3:34939988-34940007 | None:intergenic | 45.0% | |
| CATCACATACCAGGTTGCAA+GGG | - | chr7.3:34940065-34940084 | None:intergenic | 45.0% | |
| CCCCAAGCAACAACACAATT+TGG | + | chr7.3:34940100-34940119 | MS.gene071026:CDS | 45.0% | |
| CTGCATTGCCAATTCCACAA+AGG | + | chr7.3:34940155-34940174 | MS.gene071026:CDS | 45.0% | |
| GGTTGTGCAAGTTAGCACTA+CGG | - | chr7.3:34939955-34939974 | None:intergenic | 45.0% | |
| TGACCAATGTCTTTCCTGCT+TGG | + | chr7.3:34939990-34940009 | MS.gene071026:CDS | 45.0% | |
| TGGCATTTGCATCACATACC+AGG | - | chr7.3:34940074-34940093 | None:intergenic | 45.0% | |
| TTCTCCACTTCTCAAGCTCT+TGG | + | chr7.3:34939803-34939822 | MS.gene071026:CDS | 45.0% | |
| ! | CCCAAAGTGTTTGACCTTTG+TGG | - | chr7.3:34940172-34940191 | None:intergenic | 45.0% |
| ! | GCTAACTTGCACAACCCAAT+TGG | + | chr7.3:34939959-34939978 | MS.gene071026:CDS | 45.0% |
| ! | GTTGTTGCTTGGGGTGAATT+TGG | - | chr7.3:34940094-34940113 | None:intergenic | 45.0% |
| !! | GGGATGACTAATTTTTGGGG+TGG | + | chr7.3:34940121-34940140 | MS.gene071026:CDS | 45.0% |
| ACCATATGGTGGCTATGGAG+GGG | + | chr7.3:34940021-34940040 | MS.gene071026:CDS | 50.0% | |
| ACCTCCAAGAGCTTGAGAAG+TGG | - | chr7.3:34939810-34939829 | None:intergenic | 50.0% | |
| CAAATACACCCCTTGCAACC+TGG | + | chr7.3:34940053-34940072 | MS.gene071026:CDS | 50.0% | |
| CAAGTCCACTTCCAAACCCT+TGG | + | chr7.3:34939682-34939701 | MS.gene071026:CDS | 50.0% | |
| CACCATATGGTGGCTATGGA+GGG | + | chr7.3:34940020-34940039 | MS.gene071026:CDS | 50.0% | |
| CCTCAAACGCAAAATGGTGG+AGG | + | chr7.3:34939556-34939575 | MS.gene071026:CDS | 50.0% | |
| GAATGTCCACCGTTCTCCAA+GGG | - | chr7.3:34939701-34939720 | None:intergenic | 50.0% | |
| GAGCCAAGCAGGAAAGACAT+TGG | - | chr7.3:34939996-34940015 | None:intergenic | 50.0% | |
| GCATCACATACCAGGTTGCA+AGG | - | chr7.3:34940066-34940085 | None:intergenic | 50.0% | |
| GGTGTGAGTGCCAAGTCTTA+GGG | - | chr7.3:34939663-34939682 | None:intergenic | 50.0% | |
| GGTTCACCATATGGTGGCTA+TGG | + | chr7.3:34940016-34940035 | MS.gene071026:CDS | 50.0% | |
| GTTCTCCAAGGGTTTGGAAG+TGG | - | chr7.3:34939690-34939709 | None:intergenic | 50.0% | |
| TCACCATATGGTGGCTATGG+AGG | + | chr7.3:34940019-34940038 | MS.gene071026:CDS | 50.0% | |
| TCCACTTCTCAAGCTCTTGG+AGG | + | chr7.3:34939806-34939825 | MS.gene071026:CDS | 50.0% | |
| TGAATGTCCACCGTTCTCCA+AGG | - | chr7.3:34939702-34939721 | None:intergenic | 50.0% | |
| TGGTGTGAGTGCCAAGTCTT+AGG | - | chr7.3:34939664-34939683 | None:intergenic | 50.0% | |
| ! | CAAGGGTTTGGAAGTGGACT+TGG | - | chr7.3:34939684-34939703 | None:intergenic | 50.0% |
| ! | CAGGTTGCAAGGGGTGTATT+TGG | - | chr7.3:34940055-34940074 | None:intergenic | 50.0% |
| ! | CCTCCACCATTTTGCGTTTG+AGG | - | chr7.3:34939559-34939578 | None:intergenic | 50.0% |
| ACCCCTCCATAGCCACCATA+TGG | - | chr7.3:34940025-34940044 | None:intergenic | 55.0% | |
| TATGGTGAACCGAGCCAAGC+AGG | - | chr7.3:34940007-34940026 | None:intergenic | 55.0% | |
| TCCAAACCCTTGGAGAACGG+TGG | + | chr7.3:34939692-34939711 | MS.gene071026:CDS | 55.0% | |
| TCCACCGTTCTCCAAGGGTT+TGG | - | chr7.3:34939696-34939715 | None:intergenic | 55.0% | |
| TGGTCACATGGGCGCCAATT+GGG | - | chr7.3:34939976-34939995 | None:intergenic | 55.0% | |
| TTGGTCACATGGGCGCCAAT+TGG | - | chr7.3:34939977-34939996 | None:intergenic | 55.0% | |
| !! | GCTTGGCTCGGTTCACCATA+TGG | + | chr7.3:34940007-34940026 | MS.gene071026:CDS | 55.0% |
| !! | TGGCTCGGTTCACCATATGG+TGG | + | chr7.3:34940010-34940029 | MS.gene071026:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 34939515 | 34940330 | 34939515 | ID=MS.gene071026 |
| chr7.3 | mRNA | 34939515 | 34940330 | 34939515 | ID=MS.gene071026.t1;Parent=MS.gene071026 |
| chr7.3 | exon | 34939515 | 34940330 | 34939515 | ID=MS.gene071026.t1.exon1;Parent=MS.gene071026.t1 |
| chr7.3 | CDS | 34939515 | 34940330 | 34939515 | ID=cds.MS.gene071026.t1;Parent=MS.gene071026.t1 |
| Gene Sequence |
| Protein sequence |
