Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071085.t1 | AES97184.2 | 96.3 | 437 | 16 | 0 | 1 | 437 | 64 | 500 | 2.70E-240 | 840.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071085.t1 | Q94JW8 | 34.0 | 459 | 194 | 14 | 1 | 421 | 1 | 388 | 1.3e-49 | 198.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071085.t1 | G7JX04 | 96.3 | 437 | 16 | 0 | 1 | 437 | 64 | 500 | 2.0e-240 | 840.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene071085.t1 | TF | SBP |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071085.t1 | MTR_5g046670 | 96.339 | 437 | 16 | 0 | 1 | 437 | 64 | 500 | 0.0 | 877 |
MS.gene071085.t1 | MTR_2g461920 | 40.217 | 368 | 190 | 11 | 1 | 354 | 1 | 352 | 3.41e-62 | 210 |
MS.gene071085.t1 | MTR_4g109770 | 48.889 | 225 | 83 | 8 | 111 | 322 | 56 | 261 | 6.79e-51 | 179 |
MS.gene071085.t1 | MTR_3g099080 | 46.753 | 154 | 77 | 2 | 131 | 279 | 43 | 196 | 1.42e-37 | 140 |
MS.gene071085.t1 | MTR_3g085180 | 49.265 | 136 | 66 | 1 | 121 | 256 | 108 | 240 | 3.42e-37 | 141 |
MS.gene071085.t1 | MTR_8g096780 | 47.712 | 153 | 75 | 3 | 131 | 279 | 45 | 196 | 5.40e-36 | 137 |
MS.gene071085.t1 | MTR_1g053715 | 56.140 | 114 | 49 | 1 | 179 | 291 | 72 | 185 | 6.93e-36 | 135 |
MS.gene071085.t1 | MTR_4g088555 | 60.638 | 94 | 34 | 1 | 166 | 259 | 51 | 141 | 7.64e-35 | 127 |
MS.gene071085.t1 | MTR_7g444860 | 73.077 | 78 | 21 | 0 | 181 | 258 | 149 | 226 | 1.44e-34 | 131 |
MS.gene071085.t1 | MTR_2g014200 | 66.667 | 84 | 28 | 0 | 176 | 259 | 59 | 142 | 1.02e-33 | 124 |
MS.gene071085.t1 | MTR_7g092930 | 70.130 | 77 | 23 | 0 | 179 | 255 | 66 | 142 | 2.26e-33 | 128 |
MS.gene071085.t1 | MTR_8g005960 | 61.458 | 96 | 33 | 1 | 165 | 256 | 167 | 262 | 4.29e-33 | 127 |
MS.gene071085.t1 | MTR_7g028740 | 57.000 | 100 | 43 | 0 | 180 | 279 | 76 | 175 | 5.24e-33 | 128 |
MS.gene071085.t1 | MTR_2g046550 | 62.766 | 94 | 34 | 1 | 166 | 258 | 123 | 216 | 1.57e-32 | 131 |
MS.gene071085.t1 | MTR_2g078770 | 68.831 | 77 | 24 | 0 | 178 | 254 | 55 | 131 | 1.10e-31 | 119 |
MS.gene071085.t1 | MTR_1g086250 | 61.798 | 89 | 34 | 0 | 166 | 254 | 132 | 220 | 4.47e-31 | 127 |
MS.gene071085.t1 | MTR_1g035010 | 63.441 | 93 | 33 | 1 | 167 | 258 | 89 | 181 | 8.78e-31 | 125 |
MS.gene071085.t1 | MTR_8g463140 | 67.105 | 76 | 25 | 0 | 179 | 254 | 63 | 138 | 1.31e-30 | 116 |
MS.gene071085.t1 | MTR_7g110320 | 67.949 | 78 | 25 | 0 | 181 | 258 | 145 | 222 | 1.75e-30 | 125 |
MS.gene071085.t1 | MTR_7g110320 | 67.949 | 78 | 25 | 0 | 181 | 258 | 145 | 222 | 2.34e-30 | 124 |
MS.gene071085.t1 | MTR_8g080680 | 42.063 | 126 | 72 | 1 | 130 | 254 | 80 | 205 | 1.57e-27 | 113 |
MS.gene071085.t1 | MTR_8g080690 | 41.333 | 150 | 82 | 2 | 107 | 256 | 83 | 226 | 2.83e-27 | 112 |
MS.gene071085.t1 | MTR_8g080670 | 60.000 | 75 | 30 | 0 | 179 | 253 | 160 | 234 | 9.83e-26 | 108 |
MS.gene071085.t1 | MTR_2g020620 | 49.275 | 69 | 35 | 0 | 190 | 258 | 99 | 167 | 5.46e-17 | 84.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071085.t1 | AT1G69170 | 34.707 | 461 | 188 | 16 | 1 | 421 | 1 | 388 | 9.75e-61 | 203 |
MS.gene071085.t1 | AT2G42200 | 48.227 | 141 | 67 | 2 | 179 | 316 | 72 | 209 | 6.69e-35 | 133 |
MS.gene071085.t1 | AT5G50670 | 57.426 | 101 | 42 | 1 | 179 | 279 | 99 | 198 | 8.63e-35 | 133 |
MS.gene071085.t1 | AT5G50670 | 57.426 | 101 | 42 | 1 | 179 | 279 | 99 | 198 | 8.63e-35 | 133 |
MS.gene071085.t1 | AT5G50570 | 57.426 | 101 | 42 | 1 | 179 | 279 | 99 | 198 | 8.63e-35 | 133 |
MS.gene071085.t1 | AT5G50570 | 57.426 | 101 | 42 | 1 | 179 | 279 | 99 | 198 | 8.63e-35 | 133 |
MS.gene071085.t1 | AT1G27370 | 50.400 | 125 | 61 | 1 | 133 | 256 | 127 | 251 | 9.64e-35 | 132 |
MS.gene071085.t1 | AT1G27370 | 50.400 | 125 | 61 | 1 | 133 | 256 | 127 | 251 | 3.23e-34 | 132 |
MS.gene071085.t1 | AT1G27370 | 50.400 | 125 | 61 | 1 | 133 | 256 | 127 | 251 | 3.23e-34 | 132 |
MS.gene071085.t1 | AT1G27370 | 50.400 | 125 | 61 | 1 | 133 | 256 | 127 | 251 | 3.23e-34 | 132 |
MS.gene071085.t1 | AT1G27370 | 50.400 | 125 | 61 | 1 | 133 | 256 | 127 | 251 | 3.23e-34 | 132 |
MS.gene071085.t1 | AT1G27370 | 50.400 | 125 | 61 | 1 | 133 | 256 | 127 | 251 | 3.23e-34 | 132 |
MS.gene071085.t1 | AT1G27370 | 50.400 | 125 | 61 | 1 | 133 | 256 | 127 | 251 | 3.23e-34 | 132 |
MS.gene071085.t1 | AT1G27360 | 38.636 | 176 | 101 | 2 | 133 | 308 | 127 | 295 | 1.78e-33 | 130 |
MS.gene071085.t1 | AT1G27360 | 38.636 | 176 | 101 | 2 | 133 | 308 | 127 | 295 | 1.78e-33 | 130 |
MS.gene071085.t1 | AT1G27360 | 38.636 | 176 | 101 | 2 | 133 | 308 | 127 | 295 | 1.78e-33 | 130 |
MS.gene071085.t1 | AT1G27360 | 38.636 | 176 | 101 | 2 | 133 | 308 | 127 | 295 | 1.78e-33 | 130 |
MS.gene071085.t1 | AT1G76580 | 60.000 | 105 | 41 | 1 | 179 | 283 | 112 | 215 | 2.26e-33 | 133 |
MS.gene071085.t1 | AT1G76580 | 60.000 | 105 | 41 | 1 | 179 | 283 | 112 | 215 | 2.27e-33 | 133 |
MS.gene071085.t1 | AT5G43270 | 70.130 | 77 | 23 | 0 | 179 | 255 | 167 | 243 | 4.07e-33 | 129 |
MS.gene071085.t1 | AT5G43270 | 70.130 | 77 | 23 | 0 | 179 | 255 | 167 | 243 | 4.07e-33 | 129 |
MS.gene071085.t1 | AT5G43270 | 70.130 | 77 | 23 | 0 | 179 | 255 | 167 | 243 | 4.07e-33 | 129 |
MS.gene071085.t1 | AT1G76580 | 60.000 | 105 | 41 | 1 | 179 | 283 | 112 | 215 | 6.79e-33 | 132 |
MS.gene071085.t1 | AT3G57920 | 63.265 | 98 | 34 | 1 | 181 | 276 | 59 | 156 | 1.15e-32 | 127 |
MS.gene071085.t1 | AT2G33810 | 65.823 | 79 | 27 | 0 | 180 | 258 | 53 | 131 | 2.09e-32 | 120 |
MS.gene071085.t1 | AT1G20980 | 65.909 | 88 | 30 | 0 | 167 | 254 | 106 | 193 | 2.97e-32 | 130 |
MS.gene071085.t1 | AT1G02065 | 52.174 | 115 | 51 | 1 | 144 | 254 | 147 | 261 | 5.35e-32 | 124 |
MS.gene071085.t1 | AT3G60030 | 56.436 | 101 | 44 | 0 | 160 | 260 | 106 | 206 | 6.10e-32 | 129 |
MS.gene071085.t1 | AT2G47070 | 72.000 | 75 | 21 | 0 | 180 | 254 | 105 | 179 | 5.84e-31 | 126 |
MS.gene071085.t1 | AT1G53160 | 65.333 | 75 | 26 | 0 | 180 | 254 | 53 | 127 | 2.25e-29 | 113 |
MS.gene071085.t1 | AT1G53160 | 65.333 | 75 | 26 | 0 | 180 | 254 | 53 | 127 | 2.25e-29 | 113 |
MS.gene071085.t1 | AT1G53160 | 65.333 | 75 | 26 | 0 | 180 | 254 | 53 | 127 | 2.54e-29 | 113 |
MS.gene071085.t1 | AT3G15270 | 64.000 | 75 | 27 | 0 | 180 | 254 | 62 | 136 | 2.98e-29 | 113 |
MS.gene071085.t1 | AT5G18830 | 36.806 | 144 | 73 | 3 | 143 | 268 | 84 | 227 | 1.55e-20 | 95.1 |
MS.gene071085.t1 | AT5G18830 | 36.806 | 144 | 73 | 3 | 143 | 268 | 84 | 227 | 1.57e-20 | 95.1 |
MS.gene071085.t1 | AT5G18830 | 36.806 | 144 | 73 | 3 | 143 | 268 | 84 | 227 | 1.63e-20 | 94.7 |
MS.gene071085.t1 | AT2G47070 | 74.000 | 50 | 13 | 0 | 205 | 254 | 1 | 50 | 2.11e-18 | 88.2 |
MS.gene071085.t1 | AT1G02065 | 46.154 | 91 | 41 | 2 | 144 | 228 | 147 | 235 | 8.27e-17 | 80.1 |
Find 82 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTCCTGTATGCCAAGTTTA+TGG | 0.217464 | 5.1:-34528478 | MS.gene071085:CDS |
AACAAATAGCTTCTCTCTTC+AGG | 0.222642 | 5.1:+34528988 | None:intergenic |
TCTAGTTGAGGGCTGCAAAT+TGG | 0.232543 | 5.1:+34525293 | None:intergenic |
CACTTCTAGCTTACCTGCTT+TGG | 0.255243 | 5.1:-34528500 | MS.gene071085:CDS |
GATTTCCTATGGAGGCTTCT+AGG | 0.288922 | 5.1:-34528816 | MS.gene071085:CDS |
TAGAGAGGTAGTTAAAAGTA+TGG | 0.306378 | 5.1:-34528854 | MS.gene071085:CDS |
GAAGCAAAGAAATTCTGTTT+TGG | 0.338535 | 5.1:-34524964 | MS.gene071085:CDS |
TTTGCTTCTCCACCCTTTGA+AGG | 0.344895 | 5.1:+34524979 | None:intergenic |
CTAGTTGAGGGCTGCAAATT+GGG | 0.359645 | 5.1:+34525294 | None:intergenic |
TTCTAGGACTGTTCGTGGTT+CGG | 0.369527 | 5.1:-34528800 | MS.gene071085:CDS |
TTCAGATTTAATAATTTCCT+TGG | 0.376641 | 5.1:+34525040 | None:intergenic |
AAGTATGGAATTTGTGGACT+TGG | 0.383614 | 5.1:-34528839 | MS.gene071085:CDS |
AATTTGTAGTAATGGAATCT+TGG | 0.388699 | 5.1:-34529020 | None:intergenic |
AATTGTCTTCTAACCTTCAA+AGG | 0.400965 | 5.1:-34524992 | MS.gene071085:CDS |
TCATTGATTGATTTGAAGCT+AGG | 0.417700 | 5.1:-34528625 | MS.gene071085:CDS |
GACGATAACTTTAGCTGTCT+TGG | 0.422044 | 5.1:+34528390 | None:intergenic |
TTAGTAGATTGTCAAGGTGT+GGG | 0.426117 | 5.1:-34528598 | MS.gene071085:CDS |
TTCTTGAATTAGGTTCCATC+TGG | 0.429111 | 5.1:-34527799 | MS.gene071085:intron |
CTGATGGATTTCCTGCTGCT+TGG | 0.431062 | 5.1:+34525192 | None:intergenic |
GCTAGAAGTGCGGGATCTCT+TGG | 0.433355 | 5.1:+34528513 | None:intergenic |
GCTAACACGCTTTGATGAAT+CGG | 0.443304 | 5.1:+34528535 | None:intergenic |
TGTGGACTTGGGATTTCCTA+TGG | 0.444151 | 5.1:-34528827 | MS.gene071085:CDS |
TAGAAAACCCTTAGTTGAAT+GGG | 0.448095 | 5.1:-34528923 | MS.gene071085:CDS |
AGTTAAAAGTATGGAATTTG+TGG | 0.448427 | 5.1:-34528845 | MS.gene071085:CDS |
GCTGTTTCTCAAACGTGTAA+AGG | 0.456116 | 5.1:-34524920 | None:intergenic |
CAACCATAAACTTGGCATAC+AGG | 0.459443 | 5.1:+34528475 | None:intergenic |
TTTCCTGCTGCTTGGTGCAA+CGG | 0.460688 | 5.1:+34525200 | None:intergenic |
TCAAAGTGGACATATCAAAC+TGG | 0.462398 | 5.1:-34525324 | MS.gene071085:CDS |
GACATCCGCACGCAAGATAG+AGG | 0.465731 | 5.1:-34525146 | MS.gene071085:CDS |
CCATGTTACAACCATAAACT+TGG | 0.470816 | 5.1:+34528467 | None:intergenic |
GTAGAAAACCCTTAGTTGAA+TGG | 0.471526 | 5.1:-34528924 | MS.gene071085:CDS |
TTTGGTAAAGTGGGAAAATG+AGG | 0.478195 | 5.1:-34524946 | MS.gene071085:CDS |
AGTATGGAATTTGTGGACTT+GGG | 0.478417 | 5.1:-34528838 | MS.gene071085:CDS |
TCAAAGGTGTTTCAGAAACT+TGG | 0.479177 | 5.1:+34525120 | None:intergenic |
ACAAATAGCTTCTCTCTTCA+GGG | 0.479898 | 5.1:+34528989 | None:intergenic |
AAAAGCAATAACATGGATAG+AGG | 0.481057 | 5.1:+34528723 | None:intergenic |
ATTGTCTTCTAACCTTCAAA+GGG | 0.489133 | 5.1:-34524991 | MS.gene071085:CDS |
CCTCGAAAGATTACCACAAA+AGG | 0.498780 | 5.1:-34528435 | MS.gene071085:CDS |
ACAGCTAAAGTTATCGTCAA+TGG | 0.504384 | 5.1:-34528385 | MS.gene071085:CDS |
ACTTTGAAATATGTCTTGAA+AGG | 0.507641 | 5.1:+34525382 | None:intergenic |
CATTGATTGATTTGAAGCTA+GGG | 0.508340 | 5.1:-34528624 | MS.gene071085:CDS |
AATCAAACTGAGGTTTCCTT+CGG | 0.512482 | 5.1:+34527715 | None:intergenic |
GAGGCTTCTAGGACTGTTCG+TGG | 0.514115 | 5.1:-34528805 | MS.gene071085:CDS |
TTCGCAGAGCTTGTCATCAA+AGG | 0.516063 | 5.1:+34525104 | None:intergenic |
AGCAGGTAAGCTAGAAGTGC+GGG | 0.516979 | 5.1:+34528504 | None:intergenic |
ATGGTAAGCGCAGTTGTCGC+AGG | 0.518129 | 5.1:-34527761 | MS.gene071085:CDS |
TAGCGGGCACTTCTAGTTGA+GGG | 0.519257 | 5.1:+34525282 | None:intergenic |
AATTCGTGTCCATGTGTAGC+GGG | 0.520740 | 5.1:+34525266 | None:intergenic |
AATCCGTTGCACCAAGCAGC+AGG | 0.520793 | 5.1:-34525203 | MS.gene071085:CDS |
TCAGACATCTAGCTGTGAGC+TGG | 0.532209 | 5.1:-34528776 | MS.gene071085:CDS |
AGTTGTCGCAGGCGTCTAGC+TGG | 0.532617 | 5.1:-34527750 | MS.gene071085:CDS |
TAGTAGATTGTCAAGGTGTG+GGG | 0.537134 | 5.1:-34528597 | MS.gene071085:CDS |
AAGATTCTTCAGTCATATCA+AGG | 0.537497 | 5.1:-34527672 | MS.gene071085:intron |
AGATTTAATAATTTCCTTGG+AGG | 0.539297 | 5.1:+34525043 | None:intergenic |
TGGACATATCAAACTGGAAG+AGG | 0.540218 | 5.1:-34525318 | MS.gene071085:CDS |
CCAAGTTTATGGTTGTAACA+TGG | 0.549560 | 5.1:-34528467 | MS.gene071085:CDS |
TCCTTGGAGGTTATCCCACA+TGG | 0.550160 | 5.1:+34525056 | None:intergenic |
CTAGAAGTGCCCGCTACACA+TGG | 0.550524 | 5.1:-34525275 | MS.gene071085:CDS |
GTAGCGGGCACTTCTAGTTG+AGG | 0.554616 | 5.1:+34525281 | None:intergenic |
ATTAGTAGATTGTCAAGGTG+TGG | 0.566271 | 5.1:-34528599 | MS.gene071085:CDS |
TTTCAAGACATATTTCAAAG+TGG | 0.566498 | 5.1:-34525380 | MS.gene071085:CDS |
AAAGTACTGGAAGTAGCTGA+TGG | 0.566569 | 5.1:+34525176 | None:intergenic |
CTGGACACAATGAGCGCCGA+AGG | 0.574137 | 5.1:-34527731 | MS.gene071085:CDS |
TGGCATACAGGAGCCAAAGC+AGG | 0.579602 | 5.1:+34528487 | None:intergenic |
CATGATCAAATCTCTCAAAG+TGG | 0.581788 | 5.1:-34525338 | MS.gene071085:CDS |
TCATGTAACTTTGAACGAGA+CGG | 0.583364 | 5.1:-34528889 | MS.gene071085:CDS |
CTGACAGAAGAGAGAGAGCA+TGG | 0.588418 | 5.1:+34525237 | None:intergenic |
GTCTTCTAACCTTCAAAGGG+TGG | 0.588488 | 5.1:-34524988 | MS.gene071085:CDS |
CGTCGAACTCAGTTACCAGA+TGG | 0.604322 | 5.1:+34527784 | None:intergenic |
TCCATGTGGGATAACCTCCA+AGG | 0.613079 | 5.1:-34525057 | MS.gene071085:CDS |
GGACTTGGGATTTCCTATGG+AGG | 0.614398 | 5.1:-34528824 | MS.gene071085:CDS |
ACAGTCCTAGAAGCCTCCAT+AGG | 0.615388 | 5.1:+34528811 | None:intergenic |
ATGAATCAAAAGCAATAACA+TGG | 0.620760 | 5.1:+34528716 | None:intergenic |
CTAGTCATGTAATCAAACTG+AGG | 0.623999 | 5.1:+34527705 | None:intergenic |
TCGTCAATGGTGTTGAACAG+AGG | 0.637850 | 5.1:-34528372 | MS.gene071085:CDS |
GAAATTATTAAATCTGAACA+TGG | 0.656589 | 5.1:-34525035 | MS.gene071085:CDS |
TAATTCGTGTCCATGTGTAG+CGG | 0.666143 | 5.1:+34525265 | None:intergenic |
GGGAGATTAGTAGATTGTCA+AGG | 0.666785 | 5.1:-34528604 | MS.gene071085:CDS |
CTGGTAACTGAGTTCGACGA+TGG | 0.666961 | 5.1:-34527780 | MS.gene071085:CDS |
AAGCAGGTAAGCTAGAAGTG+CGG | 0.678203 | 5.1:+34528503 | None:intergenic |
GGTCGCCTCTATCTTGCGTG+CGG | 0.683326 | 5.1:+34525141 | None:intergenic |
CAATTGAAACAGATCAACAG+TGG | 0.725111 | 5.1:+34525010 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGAATAAATGATTTAAATAA+TGG | + | chr5.1:34527657-34527676 | None:intergenic | 10.0% |
!! | AGAAATAATAAGATTATAAC+AGG | + | chr5.1:34528435-34528454 | None:intergenic | 15.0% |
!! | ATAAATGATTTAAATAATGG+TGG | + | chr5.1:34527654-34527673 | None:intergenic | 15.0% |
!! | TAATAGAAAAATATACCATA+TGG | + | chr5.1:34527039-34527058 | None:intergenic | 15.0% |
!! | TAATATCTTAGAATTGTTAA+TGG | - | chr5.1:34526036-34526055 | MS.gene071085:intron | 15.0% |
!! | TATTTCATACAAATTTAGTT+AGG | + | chr5.1:34527230-34527249 | None:intergenic | 15.0% |
!! | TCAATTACTATAAGAAATTT+GGG | - | chr5.1:34527314-34527333 | MS.gene071085:intron | 15.0% |
!!! | AAATGTTATTTTAATTCCAA+AGG | + | chr5.1:34525621-34525640 | None:intergenic | 15.0% |
!!! | CTTAATTTGAAATTTTAAAC+TGG | - | chr5.1:34528068-34528087 | MS.gene071085:intron | 15.0% |
!!! | TATATTTTTCTATTAGCTTA+TGG | - | chr5.1:34527044-34527063 | MS.gene071085:intron | 15.0% |
!!! | TTTCAGTTTTTAATAAGATT+TGG | - | chr5.1:34526696-34526715 | MS.gene071085:intron | 15.0% |
!! | AAACTAATTTACATCTACAT+AGG | + | chr5.1:34527947-34527966 | None:intergenic | 20.0% |
!! | AAATTAAGTTAAAGAATCCA+TGG | + | chr5.1:34528056-34528075 | None:intergenic | 20.0% |
!! | ATAAAATTTATAACCCAAGT+GGG | - | chr5.1:34526567-34526586 | MS.gene071085:intron | 20.0% |
!! | ATCTTATAATTTAGACTTAG+AGG | + | chr5.1:34527152-34527171 | None:intergenic | 20.0% |
!! | CATATTGAAAGAAAATTGAT+AGG | - | chr5.1:34526937-34526956 | MS.gene071085:intron | 20.0% |
!! | CATGTAATTTAAAAATCAGA+AGG | - | chr5.1:34526839-34526858 | MS.gene071085:intron | 20.0% |
!! | GAAATTATTAAATCTGAACA+TGG | - | chr5.1:34528897-34528916 | MS.gene071085:CDS | 20.0% |
!! | GTCAATTACTATAAGAAATT+TGG | - | chr5.1:34527313-34527332 | MS.gene071085:intron | 20.0% |
!! | TATAAAATTTATAACCCAAG+TGG | - | chr5.1:34526566-34526585 | MS.gene071085:intron | 20.0% |
!! | TTAAACATTTCAAACAAAAG+AGG | - | chr5.1:34527434-34527453 | MS.gene071085:intron | 20.0% |
!! | TTCAGATTTAATAATTTCCT+TGG | + | chr5.1:34528895-34528914 | None:intergenic | 20.0% |
!! | TTGTATGAAATATCAATCAT+TGG | - | chr5.1:34527238-34527257 | MS.gene071085:intron | 20.0% |
!! | TTTCATCGAGTTTATTTATT+AGG | + | chr5.1:34527763-34527782 | None:intergenic | 20.0% |
!!! | AAACAATTACACTTGTTAAA+TGG | + | chr5.1:34527532-34527551 | None:intergenic | 20.0% |
!!! | AAACTCTTAAATTCTTTTTC+TGG | + | chr5.1:34525771-34525790 | None:intergenic | 20.0% |
!!! | AACTCTATTATATTTTGAAG+TGG | + | chr5.1:34526761-34526780 | None:intergenic | 20.0% |
!!! | CGTATTATTTTACTTTCTTA+TGG | - | chr5.1:34525821-34525840 | MS.gene071085:intron | 20.0% |
!!! | CTTATTTTTGTTCTTGAATT+AGG | - | chr5.1:34526123-34526142 | MS.gene071085:intron | 20.0% |
!!! | GAAATATAATTCTAGTTGTT+AGG | + | chr5.1:34526464-34526483 | None:intergenic | 20.0% |
!!! | TATAACTGCATTTTAAAACT+AGG | - | chr5.1:34528019-34528038 | MS.gene071085:intron | 20.0% |
!!! | TCTGATTTTTAAATTACATG+TGG | + | chr5.1:34526839-34526858 | None:intergenic | 20.0% |
!!! | TTACATTTTTACTGTTATTC+TGG | - | chr5.1:34528208-34528227 | MS.gene071085:intron | 20.0% |
!!! | TTTAAAATGCAGTTATAAAG+CGG | + | chr5.1:34528016-34528035 | None:intergenic | 20.0% |
!!! | TTTTATCAAAGTCAATATGA+AGG | + | chr5.1:34526655-34526674 | None:intergenic | 20.0% |
! | ACACAAAATCCTAACTAATA+TGG | + | chr5.1:34526889-34526908 | None:intergenic | 25.0% |
! | AGAAAGTAAAATAATACGAG+AGG | + | chr5.1:34525819-34525838 | None:intergenic | 25.0% |
! | AGATTTAATAATTTCCTTGG+AGG | + | chr5.1:34528892-34528911 | None:intergenic | 25.0% |
! | ATAGATAAGACAGCAAAAAT+TGG | - | chr5.1:34526318-34526337 | MS.gene071085:intron | 25.0% |
! | ATGAACTGAAATTAAAACCT+TGG | - | chr5.1:34527385-34527404 | MS.gene071085:intron | 25.0% |
! | ATGAATCAAAAGCAATAACA+TGG | + | chr5.1:34525219-34525238 | None:intergenic | 25.0% |
! | CAATTCATGATTTCAATAGA+AGG | - | chr5.1:34527675-34527694 | MS.gene071085:CDS | 25.0% |
! | CTAAACTAAATCTTCCTAAT+GGG | - | chr5.1:34528453-34528472 | MS.gene071085:CDS | 25.0% |
! | GAATTGTCAAATAAACTAGA+CGG | + | chr5.1:34525901-34525920 | None:intergenic | 25.0% |
! | GTTTCTTAACCATATTAGTT+AGG | - | chr5.1:34526877-34526896 | MS.gene071085:intron | 25.0% |
! | TCATAGTCTAAATTCTAACA+TGG | - | chr5.1:34526013-34526032 | MS.gene071085:intron | 25.0% |
! | TCTAAACTAAATCTTCCTAA+TGG | - | chr5.1:34528452-34528471 | MS.gene071085:CDS | 25.0% |
! | TTATGTCTGATAATTAGTTG+CGG | - | chr5.1:34526370-34526389 | MS.gene071085:intron | 25.0% |
! | TTGACTTTGATAAAAATCTG+TGG | - | chr5.1:34526660-34526679 | MS.gene071085:intron | 25.0% |
! | TTTCAAGACATATTTCAAAG+TGG | - | chr5.1:34528552-34528571 | MS.gene071085:CDS | 25.0% |
!! | ACTTTCTTATGGTTTTCTTA+GGG | - | chr5.1:34525832-34525851 | MS.gene071085:intron | 25.0% |
!! | AGTTAAAAGTATGGAATTTG+TGG | - | chr5.1:34525087-34525106 | MS.gene071085:CDS | 25.0% |
!! | CTTCTTTGATTTATTCGAAT+AGG | - | chr5.1:34525728-34525747 | MS.gene071085:intron | 25.0% |
!! | CTTTTTAAACGTCAAAATTG+TGG | - | chr5.1:34528125-34528144 | MS.gene071085:intron | 25.0% |
!! | GATTTTTAAATTACATGTGG+TGG | + | chr5.1:34526836-34526855 | None:intergenic | 25.0% |
!! | GCAAAATTATGAATTTTCGA+TGG | - | chr5.1:34528310-34528329 | MS.gene071085:intron | 25.0% |
!! | TACTATAAGAAATTTGGGTT+AGG | - | chr5.1:34527319-34527338 | MS.gene071085:intron | 25.0% |
!! | TACTTTCTTATGGTTTTCTT+AGG | - | chr5.1:34525831-34525850 | MS.gene071085:intron | 25.0% |
!!! | AAAAACTAGTCTTACAACAT+TGG | + | chr5.1:34527599-34527618 | None:intergenic | 25.0% |
!!! | AAATTCTGTTTTGGTAAAGT+GGG | - | chr5.1:34528977-34528996 | MS.gene071085:CDS | 25.0% |
!!! | AAGGTTTTAATTTCAGTTCA+TGG | + | chr5.1:34527386-34527405 | None:intergenic | 25.0% |
!!! | AATTTTGCAGTTGTTTTCAA+TGG | + | chr5.1:34528298-34528317 | None:intergenic | 25.0% |
!!! | ACTCCATCTTTTAATTTTTG+TGG | - | chr5.1:34527487-34527506 | MS.gene071085:intron | 25.0% |
!!! | ACTTTGAAATATGTCTTGAA+AGG | + | chr5.1:34528553-34528572 | None:intergenic | 25.0% |
!!! | ACTTTTATAATGGATTTCGA+AGG | + | chr5.1:34526625-34526644 | None:intergenic | 25.0% |
!!! | ATAGAGTTGATAGATAGATT+AGG | - | chr5.1:34526773-34526792 | MS.gene071085:intron | 25.0% |
!!! | CTATTTGTTTTCTGATGAAA+TGG | - | chr5.1:34524958-34524977 | MS.gene071085:CDS | 25.0% |
!!! | TTCCAATTTTTTCGTTGTTT+TGG | + | chr5.1:34528170-34528189 | None:intergenic | 25.0% |
AAAAGCAATAACATGGATAG+AGG | + | chr5.1:34525212-34525231 | None:intergenic | 30.0% | |
AAGATTCTTCAGTCATATCA+AGG | - | chr5.1:34526260-34526279 | MS.gene071085:intron | 30.0% | |
AATCAGAAGGTTTCTATTTC+AGG | - | chr5.1:34526852-34526871 | MS.gene071085:intron | 30.0% | |
AATTCTCAAAAGAACAGATG+AGG | + | chr5.1:34526351-34526370 | None:intergenic | 30.0% | |
AATTGTCTTCTAACCTTCAA+AGG | - | chr5.1:34528940-34528959 | MS.gene071085:CDS | 30.0% | |
ACGGAAATATCATTTGTTCA+TGG | + | chr5.1:34526422-34526441 | None:intergenic | 30.0% | |
ATACTTCTCTTACAATCAGA+TGG | - | chr5.1:34525643-34525662 | MS.gene071085:intron | 30.0% | |
ATAGCTTAAATCTCTCAAGT+TGG | - | chr5.1:34527079-34527098 | MS.gene071085:intron | 30.0% | |
ATATTTCCAAATTGCCATCA+TGG | - | chr5.1:34526477-34526496 | MS.gene071085:intron | 30.0% | |
ATTGTCTTCTAACCTTCAAA+GGG | - | chr5.1:34528941-34528960 | MS.gene071085:CDS | 30.0% | |
CAAATATCTTATTCCTAGCA+TGG | + | chr5.1:34526537-34526556 | None:intergenic | 30.0% | |
CTCTGATCAATTAGTGTATA+TGG | - | chr5.1:34525927-34525946 | MS.gene071085:intron | 30.0% | |
GGACCACAAAAATTAAAAGA+TGG | + | chr5.1:34527493-34527512 | None:intergenic | 30.0% | |
GTCCAAAACAACGAAAAAAT+TGG | - | chr5.1:34528165-34528184 | MS.gene071085:intron | 30.0% | |
TAGAAAACCCTTAGTTGAAT+GGG | - | chr5.1:34525009-34525028 | MS.gene071085:CDS | 30.0% | |
TAGACTATGAATGACTACTA+TGG | + | chr5.1:34526003-34526022 | None:intergenic | 30.0% | |
TAGAGAGGTAGTTAAAAGTA+TGG | - | chr5.1:34525078-34525097 | MS.gene071085:CDS | 30.0% | |
TTGTCTTTCTGTTTGATGTT+TGG | - | chr5.1:34527887-34527906 | MS.gene071085:intron | 30.0% | |
TTGTGCATAAAAAACTCTGA+TGG | + | chr5.1:34527559-34527578 | None:intergenic | 30.0% | |
! | AGATTTGATCATGCTTTTCT+TGG | + | chr5.1:34528587-34528606 | None:intergenic | 30.0% |
! | AGGATGCTACACTTTTATAA+TGG | + | chr5.1:34526635-34526654 | None:intergenic | 30.0% |
! | ATTTTCGATGGATGAGATAA+AGG | - | chr5.1:34528322-34528341 | MS.gene071085:intron | 30.0% |
! | GAAGCAAAGAAATTCTGTTT+TGG | - | chr5.1:34528968-34528987 | MS.gene071085:CDS | 30.0% |
! | TCTATTAGCTTATGGTATAC+AGG | - | chr5.1:34527052-34527071 | MS.gene071085:intron | 30.0% |
! | TTAGTTAGGATTTTGTGTGA+AGG | - | chr5.1:34526891-34526910 | MS.gene071085:intron | 30.0% |
! | TTGTTTTCCCATTCAACTAA+GGG | + | chr5.1:34525019-34525038 | None:intergenic | 30.0% |
!! | AATAATACGAGAGGTATTGA+TGG | + | chr5.1:34525810-34525829 | None:intergenic | 30.0% |
!! | CATTGATTGATTTGAAGCTA+GGG | - | chr5.1:34525308-34525327 | MS.gene071085:CDS | 30.0% |
!! | TCATTGATTGATTTGAAGCT+AGG | - | chr5.1:34525307-34525326 | MS.gene071085:CDS | 30.0% |
!! | TGCTTTTGATTCATCTTTTG+CGG | - | chr5.1:34525225-34525244 | MS.gene071085:CDS | 30.0% |
!! | TTCTGGTTGACATTTTAATG+AGG | - | chr5.1:34528225-34528244 | MS.gene071085:intron | 30.0% |
!! | TTTGTTTTCCCATTCAACTA+AGG | + | chr5.1:34525020-34525039 | None:intergenic | 30.0% |
!!! | AGTTTTTTGACTTTGTGATG+TGG | - | chr5.1:34527011-34527030 | MS.gene071085:intron | 30.0% |
!!! | CTACTTCCAGTACTTTTTTT+CGG | - | chr5.1:34528763-34528782 | MS.gene071085:CDS | 30.0% |
!!! | GAAATTCTGTTTTGGTAAAG+TGG | - | chr5.1:34528976-34528995 | MS.gene071085:CDS | 30.0% |
!!! | GGTATATTTTTTGGTTCCTT+TGG | - | chr5.1:34525602-34525621 | MS.gene071085:intron | 30.0% |
!!! | TACTTCCAGTACTTTTTTTC+GGG | - | chr5.1:34528764-34528783 | MS.gene071085:CDS | 30.0% |
!!! | TTTTAATTTCAGTTCATGGC+AGG | + | chr5.1:34527382-34527401 | None:intergenic | 30.0% |
!!! | TTTTAATTTTTGTGGTCCCA+GGG | - | chr5.1:34527495-34527514 | MS.gene071085:intron | 30.0% |
AACAAATAGCTTCTCTCTTC+AGG | + | chr5.1:34524947-34524966 | None:intergenic | 35.0% | |
AAGTATGGAATTTGTGGACT+TGG | - | chr5.1:34525093-34525112 | MS.gene071085:CDS | 35.0% | |
AAGTTAAAGAATCCATGGTG+TGG | + | chr5.1:34528051-34528070 | None:intergenic | 35.0% | |
AATCAAACTGAGGTTTCCTT+CGG | + | chr5.1:34526220-34526239 | None:intergenic | 35.0% | |
AATCCTCATAAACACCATGA+TGG | + | chr5.1:34526494-34526513 | None:intergenic | 35.0% | |
ACAAATAGCTTCTCTCTTCA+GGG | + | chr5.1:34524946-34524965 | None:intergenic | 35.0% | |
ACAGCTAAAGTTATCGTCAA+TGG | - | chr5.1:34525547-34525566 | MS.gene071085:intron | 35.0% | |
AGTATGGAATTTGTGGACTT+GGG | - | chr5.1:34525094-34525113 | MS.gene071085:CDS | 35.0% | |
ATGTGGTGGTTAAAGATTAG+AGG | + | chr5.1:34526822-34526841 | None:intergenic | 35.0% | |
ATTAGTAGATTGTCAAGGTG+TGG | - | chr5.1:34525333-34525352 | MS.gene071085:CDS | 35.0% | |
CAAATAAACTAGACGGCATT+TGG | + | chr5.1:34525894-34525913 | None:intergenic | 35.0% | |
CAATAGAAGGTCATTGTTGT+TGG | - | chr5.1:34527688-34527707 | MS.gene071085:CDS | 35.0% | |
CATGATCAAATCTCTCAAAG+TGG | - | chr5.1:34528594-34528613 | MS.gene071085:CDS | 35.0% | |
CATGGTGTTTATGAGGATTT+AGG | - | chr5.1:34526495-34526514 | MS.gene071085:intron | 35.0% | |
CCAAGTTTATGGTTGTAACA+TGG | - | chr5.1:34525465-34525484 | MS.gene071085:intron | 35.0% | |
CCATGTTACAACCATAAACT+TGG | + | chr5.1:34525468-34525487 | None:intergenic | 35.0% | |
CTAGTCATGTAATCAAACTG+AGG | + | chr5.1:34526230-34526249 | None:intergenic | 35.0% | |
GAGTAAAGTGTGTGTACTTA+AGG | - | chr5.1:34527806-34527825 | MS.gene071085:intron | 35.0% | |
GCAATGTAATGAGCTTTCAT+TGG | + | chr5.1:34527984-34528003 | None:intergenic | 35.0% | |
GTAGAAAACCCTTAGTTGAA+TGG | - | chr5.1:34525008-34525027 | MS.gene071085:CDS | 35.0% | |
GTTAAACTCTTATAGCAGAC+AGG | + | chr5.1:34527917-34527936 | None:intergenic | 35.0% | |
TAAACACCATGATGGCAATT+TGG | + | chr5.1:34526486-34526505 | None:intergenic | 35.0% | |
TAACTCTATTGAACGCTTCA+CGG | + | chr5.1:34526441-34526460 | None:intergenic | 35.0% | |
TAGATTCTTCGCTATGTATG+TGG | + | chr5.1:34528488-34528507 | None:intergenic | 35.0% | |
TCAAAGTGGACATATCAAAC+TGG | - | chr5.1:34528608-34528627 | MS.gene071085:CDS | 35.0% | |
TCATGTAACTTTGAACGAGA+CGG | - | chr5.1:34525043-34525062 | MS.gene071085:CDS | 35.0% | |
TCTGCTATAAGAGTTTAACG+AGG | - | chr5.1:34527918-34527937 | MS.gene071085:intron | 35.0% | |
TGATTAATACTCTTCCCTTG+AGG | + | chr5.1:34527106-34527125 | None:intergenic | 35.0% | |
TTAGTAGATTGTCAAGGTGT+GGG | - | chr5.1:34525334-34525353 | MS.gene071085:CDS | 35.0% | |
TTCTCTTGCACTAAATGTGT+AGG | - | chr5.1:34528513-34528532 | MS.gene071085:CDS | 35.0% | |
TTCTTGAATTAGGTTCCATC+TGG | - | chr5.1:34526133-34526152 | MS.gene071085:intron | 35.0% | |
TTTGGTAAAGTGGGAAAATG+AGG | - | chr5.1:34528986-34529005 | MS.gene071085:CDS | 35.0% | |
! | AGTTATAAAGCGGACTTATG+TGG | + | chr5.1:34528006-34528025 | None:intergenic | 35.0% |
! | ATCAAAGAAGTGCAGAAATG+AGG | + | chr5.1:34525718-34525737 | None:intergenic | 35.0% |
! | GAAATGAGTCTTTTCCATGT+GGG | - | chr5.1:34528862-34528881 | MS.gene071085:CDS | 35.0% |
! | GAAATTTGGGTTAGGTAATG+CGG | - | chr5.1:34527327-34527346 | MS.gene071085:intron | 35.0% |
! | GATCATGCTTTTCTTGGAAA+AGG | + | chr5.1:34528581-34528600 | None:intergenic | 35.0% |
! | TAGGATTTTGTGTGAAGGTA+GGG | - | chr5.1:34526896-34526915 | MS.gene071085:intron | 35.0% |
! | TAGGTCATATTTTCCCACTT+GGG | + | chr5.1:34526583-34526602 | None:intergenic | 35.0% |
! | TTAGGATTTTGTGTGAAGGT+AGG | - | chr5.1:34526895-34526914 | MS.gene071085:intron | 35.0% |
! | TTAGGTCATATTTTCCCACT+TGG | + | chr5.1:34526584-34526603 | None:intergenic | 35.0% |
!! | TCAAAGGTGTTTCAGAAACT+TGG | + | chr5.1:34528815-34528834 | None:intergenic | 35.0% |
!!! | AGTGCAGCAGGTATATTTTT+TGG | - | chr5.1:34525593-34525612 | MS.gene071085:intron | 35.0% |
!!! | CGGTTTTAATTCAGATAGAG+AGG | - | chr5.1:34525063-34525082 | MS.gene071085:CDS | 35.0% |
!!! | CTTTTAATTTTTGTGGTCCC+AGG | - | chr5.1:34527494-34527513 | MS.gene071085:intron | 35.0% |
!!! | GAAGGTTTTTTCTGTCACTA+CGG | + | chr5.1:34526607-34526626 | None:intergenic | 35.0% |
!!! | TTTTTTCTGTCACTACGGTT+AGG | + | chr5.1:34526602-34526621 | None:intergenic | 35.0% |
CAACCATAAACTTGGCATAC+AGG | + | chr5.1:34525460-34525479 | None:intergenic | 40.0% | |
CAAGACTGGACATTTACAAG+TGG | + | chr5.1:34526063-34526082 | None:intergenic | 40.0% | |
CAGAAGGTTTCTATTTCAGG+AGG | - | chr5.1:34526855-34526874 | MS.gene071085:intron | 40.0% | |
CCTCGAAAGATTACCACAAA+AGG | - | chr5.1:34525497-34525516 | MS.gene071085:intron | 40.0% | |
GACGATAACTTTAGCTGTCT+TGG | + | chr5.1:34525545-34525564 | None:intergenic | 40.0% | |
GCTAACACGCTTTGATGAAT+CGG | + | chr5.1:34525400-34525419 | None:intergenic | 40.0% | |
GGGAGATTAGTAGATTGTCA+AGG | - | chr5.1:34525328-34525347 | MS.gene071085:CDS | 40.0% | |
GTACACACACTTTACTCTTG+CGG | + | chr5.1:34527803-34527822 | None:intergenic | 40.0% | |
GTTTATGAGGATTTAGGTCC+TGG | - | chr5.1:34526501-34526520 | MS.gene071085:intron | 40.0% | |
TAATTCGTGTCCATGTGTAG+CGG | + | chr5.1:34528670-34528689 | None:intergenic | 40.0% | |
TAGCATGGAATAGATAGACC+AGG | + | chr5.1:34526522-34526541 | None:intergenic | 40.0% | |
TAGTAGATTGTCAAGGTGTG+GGG | - | chr5.1:34525335-34525354 | MS.gene071085:CDS | 40.0% | |
TGCTCTCTTTCTAGATTCCA+AGG | + | chr5.1:34527405-34527424 | None:intergenic | 40.0% | |
TGGACATATCAAACTGGAAG+AGG | - | chr5.1:34528614-34528633 | MS.gene071085:CDS | 40.0% | |
TGGTCTATCTATTCCATGCT+AGG | - | chr5.1:34526521-34526540 | MS.gene071085:intron | 40.0% | |
TTGCCATCATGGTGTTTATG+AGG | - | chr5.1:34526488-34526507 | MS.gene071085:intron | 40.0% | |
! | CCTTTTGTGGTAATCTTTCG+AGG | + | chr5.1:34525500-34525519 | None:intergenic | 40.0% |
! | CGAAATGAGTCTTTTCCATG+TGG | - | chr5.1:34528861-34528880 | MS.gene071085:CDS | 40.0% |
! | GATGTCCCGAAAAAAAGTAC+TGG | + | chr5.1:34528772-34528791 | None:intergenic | 40.0% |
! | TAGTTTTTCGCTATCGTGGT+AGG | - | chr5.1:34527611-34527630 | MS.gene071085:intron | 40.0% |
! | TGTGTGTACTTAAGGCACTA+GGG | - | chr5.1:34527814-34527833 | MS.gene071085:intron | 40.0% |
!! | AAAGTACTGGAAGTAGCTGA+TGG | + | chr5.1:34528759-34528778 | None:intergenic | 40.0% |
!!! | AGACTAGTTTTTCGCTATCG+TGG | - | chr5.1:34527607-34527626 | MS.gene071085:intron | 40.0% |
AAATGGTCCACATCATTCCC+TGG | + | chr5.1:34527515-34527534 | None:intergenic | 45.0% | |
AAGCAGGTAAGCTAGAAGTG+CGG | + | chr5.1:34525432-34525451 | None:intergenic | 45.0% | |
AATGGTCCACATCATTCCCT+GGG | + | chr5.1:34527514-34527533 | None:intergenic | 45.0% | |
AATTCGTGTCCATGTGTAGC+GGG | + | chr5.1:34528669-34528688 | None:intergenic | 45.0% | |
ACTAGGCAAAAACCACACCA+TGG | - | chr5.1:34528036-34528055 | MS.gene071085:intron | 45.0% | |
CTAGTTGAGGGCTGCAAATT+GGG | + | chr5.1:34528641-34528660 | None:intergenic | 45.0% | |
CTTTGTGATGTGGAGCCATA+TGG | - | chr5.1:34527021-34527040 | MS.gene071085:intron | 45.0% | |
GAGCTTTCATTGGATGTCGT+CGG | + | chr5.1:34527974-34527993 | None:intergenic | 45.0% | |
GATTTCCTATGGAGGCTTCT+AGG | - | chr5.1:34525116-34525135 | MS.gene071085:CDS | 45.0% | |
GCTCCTGTATGCCAAGTTTA+TGG | - | chr5.1:34525454-34525473 | MS.gene071085:intron | 45.0% | |
GTCTTCTAACCTTCAAAGGG+TGG | - | chr5.1:34528944-34528963 | MS.gene071085:CDS | 45.0% | |
GTTAAGCCAGAACTGCATCA+GGG | + | chr5.1:34528350-34528369 | None:intergenic | 45.0% | |
TACAGAGCAGTTTGCAAGAC+TGG | + | chr5.1:34526077-34526096 | None:intergenic | 45.0% | |
TCTAGTTGAGGGCTGCAAAT+TGG | + | chr5.1:34528642-34528661 | None:intergenic | 45.0% | |
TGTGGAACATCGTTCCCATT+AGG | + | chr5.1:34528470-34528489 | None:intergenic | 45.0% | |
TGTGGACTTGGGATTTCCTA+TGG | - | chr5.1:34525105-34525124 | MS.gene071085:CDS | 45.0% | |
TGTTAAGCCAGAACTGCATC+AGG | + | chr5.1:34528351-34528370 | None:intergenic | 45.0% | |
TTAAGCCAGAACTGCATCAG+GGG | + | chr5.1:34528349-34528368 | None:intergenic | 45.0% | |
TTCGCAGAGCTTGTCATCAA+AGG | + | chr5.1:34528831-34528850 | None:intergenic | 45.0% | |
TTTGCTTCTCCACCCTTTGA+AGG | + | chr5.1:34528956-34528975 | None:intergenic | 45.0% | |
! | CGCAGACTTTATGCCTTTTG+TGG | + | chr5.1:34525513-34525532 | None:intergenic | 45.0% |
! | GTGTGTGTACTTAAGGCACT+AGG | - | chr5.1:34527813-34527832 | MS.gene071085:intron | 45.0% |
! | TCGTCAATGGTGTTGAACAG+AGG | - | chr5.1:34525560-34525579 | MS.gene071085:intron | 45.0% |
!! | ATCTCTCAAGTTGGTCCTCA+AGG | - | chr5.1:34527088-34527107 | MS.gene071085:intron | 45.0% |
!! | CACTTCTAGCTTACCTGCTT+TGG | - | chr5.1:34525432-34525451 | MS.gene071085:intron | 45.0% |
!! | TCTCTCAAGTTGGTCCTCAA+GGG | - | chr5.1:34527089-34527108 | MS.gene071085:intron | 45.0% |
!! | TTCTAGGACTGTTCGTGGTT+CGG | - | chr5.1:34525132-34525151 | MS.gene071085:CDS | 45.0% |
!! | TTTATATCTAAAAAAATAAA+GGG | + | chr5.1:34528094-34528113 | None:intergenic | 5.0% |
!!! | TTTTATATCTAAAAAAATAA+AGG | + | chr5.1:34528095-34528114 | None:intergenic | 5.0% |
ACAGTCCTAGAAGCCTCCAT+AGG | + | chr5.1:34525124-34525143 | None:intergenic | 50.0% | |
CGTCGAACTCAGTTACCAGA+TGG | + | chr5.1:34526151-34526170 | None:intergenic | 50.0% | |
CTGACAGAAGAGAGAGAGCA+TGG | + | chr5.1:34528698-34528717 | None:intergenic | 50.0% | |
CTGGTAACTGAGTTCGACGA+TGG | - | chr5.1:34526152-34526171 | MS.gene071085:intron | 50.0% | |
GGACTTGGGATTTCCTATGG+AGG | - | chr5.1:34525108-34525127 | MS.gene071085:CDS | 50.0% | |
TCAGACATCTAGCTGTGAGC+TGG | - | chr5.1:34525156-34525175 | MS.gene071085:CDS | 50.0% | |
TCCATGTGGGATAACCTCCA+AGG | - | chr5.1:34528875-34528894 | MS.gene071085:CDS | 50.0% | |
TCCTTGGAGGTTATCCCACA+TGG | + | chr5.1:34528879-34528898 | None:intergenic | 50.0% | |
! | AGCAGGTAAGCTAGAAGTGC+GGG | + | chr5.1:34525431-34525450 | None:intergenic | 50.0% |
! | TAGCGGGCACTTCTAGTTGA+GGG | + | chr5.1:34528653-34528672 | None:intergenic | 50.0% |
!! | CTGATGGATTTCCTGCTGCT+TGG | + | chr5.1:34528743-34528762 | None:intergenic | 50.0% |
!! | TTTCCTGCTGCTTGGTGCAA+CGG | + | chr5.1:34528735-34528754 | None:intergenic | 50.0% |
AAGGACCCCTGATGCAGTTC+TGG | - | chr5.1:34528341-34528360 | MS.gene071085:intron | 55.0% | |
AATCCGTTGCACCAAGCAGC+AGG | - | chr5.1:34528729-34528748 | MS.gene071085:CDS | 55.0% | |
ATGGTAAGCGCAGTTGTCGC+AGG | - | chr5.1:34526171-34526190 | MS.gene071085:intron | 55.0% | |
GACATCCGCACGCAAGATAG+AGG | - | chr5.1:34528786-34528805 | MS.gene071085:CDS | 55.0% | |
TGGCATACAGGAGCCAAAGC+AGG | + | chr5.1:34525448-34525467 | None:intergenic | 55.0% | |
TGTGGTCCCAGGGAATGATG+TGG | - | chr5.1:34527505-34527524 | MS.gene071085:intron | 55.0% | |
! | GCTAGAAGTGCGGGATCTCT+TGG | + | chr5.1:34525422-34525441 | None:intergenic | 55.0% |
!! | CTAGAAGTGCCCGCTACACA+TGG | - | chr5.1:34528657-34528676 | MS.gene071085:CDS | 55.0% |
!! | GAGGCTTCTAGGACTGTTCG+TGG | - | chr5.1:34525127-34525146 | MS.gene071085:CDS | 55.0% |
!! | GGTTTTGTCAGCAGTGCAGC+AGG | - | chr5.1:34525581-34525600 | MS.gene071085:intron | 55.0% |
!! | GTAGCGGGCACTTCTAGTTG+AGG | + | chr5.1:34528654-34528673 | None:intergenic | 55.0% |
AGTTGTCGCAGGCGTCTAGC+TGG | - | chr5.1:34526182-34526201 | MS.gene071085:intron | 60.0% | |
GGTCGCCTCTATCTTGCGTG+CGG | + | chr5.1:34528794-34528813 | None:intergenic | 60.0% | |
!! | CTGGACACAATGAGCGCCGA+AGG | - | chr5.1:34526201-34526220 | MS.gene071085:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 34524923 | 34529031 | 34524923 | ID=MS.gene071085 |
chr5.1 | mRNA | 34524923 | 34529031 | 34524923 | ID=MS.gene071085.t1;Parent=MS.gene071085 |
chr5.1 | exon | 34528352 | 34529031 | 34528352 | ID=MS.gene071085.t1.exon1;Parent=MS.gene071085.t1 |
chr5.1 | CDS | 34528352 | 34529031 | 34528352 | ID=cds.MS.gene071085.t1;Parent=MS.gene071085.t1 |
chr5.1 | exon | 34527673 | 34527809 | 34527673 | ID=MS.gene071085.t1.exon2;Parent=MS.gene071085.t1 |
chr5.1 | CDS | 34527673 | 34527809 | 34527673 | ID=cds.MS.gene071085.t1;Parent=MS.gene071085.t1 |
chr5.1 | exon | 34524923 | 34525419 | 34524923 | ID=MS.gene071085.t1.exon3;Parent=MS.gene071085.t1 |
chr5.1 | CDS | 34524923 | 34525419 | 34524923 | ID=cds.MS.gene071085.t1;Parent=MS.gene071085.t1 |
Gene Sequence |
Protein sequence |