AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene071353

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene071353.t1 MTR_1g019850 83.815 173 15 1 78 237 26 198 1.24e-96 293
MS.gene071353.t1 MTR_2g024230 77.670 103 22 1 77 178 44 146 3.07e-47 162
MS.gene071353.t1 MTR_0853s0010 52.555 137 45 2 119 235 22 158 4.02e-38 138
MS.gene071353.t1 MTR_3g026060 84.314 51 8 0 481 531 23 73 5.28e-22 95.1
MS.gene071353.t1 MTR_1g047860 58.730 63 26 0 7 69 7 69 2.88e-16 77.8
MS.gene071353.t1 MTR_1g033820 62.500 48 18 0 119 166 24 71 1.06e-15 73.2
MS.gene071353.t1 MTR_6g048540 49.333 75 30 1 117 183 23 97 4.35e-13 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 101 sgRNAs with CRISPR-Local

Find 319 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTTGAAATTGGAGAATA+TGG 0.109704 2.1:-34248571 MS.gene071353:CDS
CATCCTCAATTCTTTGAAAT+TGG 0.119362 2.1:-34248580 MS.gene071353:CDS
GAAAGTTGCTACAATGTTTC+AGG 0.177913 2.1:-34250528 MS.gene071353:CDS
TAGTAAGCTTGATTCTTTAA+AGG 0.189576 2.1:-34248532 MS.gene071353:CDS
AACTCCAAAACCTTCTTTCT+TGG 0.194532 2.1:+34250859 None:intergenic
GGCAATATCTTTGGCTTGTT+TGG 0.221133 2.1:+34248779 None:intergenic
TATTTGTCCTATTGTTGATA+TGG 0.229024 2.1:-34250927 MS.gene071353:CDS
CCATTGTTCATCACACAAAA+TGG 0.248708 2.1:-34248758 MS.gene071353:CDS
TCACTGTTAACTTCTCTTCT+AGG 0.257651 2.1:+34253009 None:intergenic
CAGTAGATCCAGATAAAATT+TGG 0.301012 2.1:+34248388 None:intergenic
AAGCAGGGAAGAGAAGTAAA+TGG 0.304863 2.1:-34250694 MS.gene071353:CDS
TACGACAATCAGCTTCAATA+TGG 0.335500 2.1:+34248178 None:intergenic
ATGAACAATGGCAATATCTT+TGG 0.337455 2.1:+34248770 None:intergenic
GAACAACCAACTACAACATA+TGG 0.339605 2.1:-34248854 MS.gene071353:CDS
CCTTGTCTAGTCGGGATTGC+TGG 0.343131 2.1:-34250493 MS.gene071353:CDS
TTCATGGTCATGGCTCTTGT+TGG 0.350934 2.1:-34248441 MS.gene071353:CDS
TTTGCCAAGAAAGAAGGTTT+TGG 0.354079 2.1:-34250863 MS.gene071353:CDS
TTTACAAGTTCCGAGTAGTT+TGG 0.366365 2.1:+34252879 None:intergenic
TATGTTGTAGTTGGTTGTTC+CGG 0.385827 2.1:+34248857 None:intergenic
TCACTAACTGTCTCATAATC+AGG 0.421845 2.1:+34248363 None:intergenic
TTGCGCACAGAATCAAGTTC+TGG 0.423622 2.1:+34248411 None:intergenic
TCAAATTCCATATCAACAAT+AGG 0.427064 2.1:+34250920 None:intergenic
GAAGGTACACATATAGTAAA+GGG 0.439216 2.1:-34250788 MS.gene071353:CDS
GCCGTCAGACTCTGGTTTCA+CGG 0.450924 2.1:-34248825 MS.gene071353:CDS
TCACTTACTGTTTCAAAAGC+AGG 0.452498 2.1:-34250710 MS.gene071353:CDS
TCTCCAATTTCAAAGAATTG+AGG 0.457979 2.1:+34248577 None:intergenic
CGTCGGAGATGTTACTATTC+CGG 0.461993 2.1:-34248097 MS.gene071353:CDS
ACATCGTTTGCCAAGAAAGA+AGG 0.462978 2.1:-34250869 MS.gene071353:CDS
ACACAGAATGAGCGAAACTT+TGG 0.470422 2.1:+34248890 None:intergenic
GTTGAGAAGTTTGATGAAGA+AGG 0.472036 2.1:-34250563 MS.gene071353:CDS
ATAAACAATGTTCACAATCA+TGG 0.474196 2.1:-34250659 MS.gene071353:CDS
AATATTAGCTTCAGGTGACT+TGG 0.474696 2.1:+34250946 None:intergenic
TTATTCGGGTTAAAAGAGAA+TGG 0.478178 2.1:-34252966 MS.gene071353:CDS
ATAGGACAAATATTAGCTTC+AGG 0.478911 2.1:+34250938 None:intergenic
GAGAATCGATTATGTTTAGC+AGG 0.481467 2.1:+34252937 None:intergenic
GGGCTGGTGCCGTCAGACTC+TGG 0.485988 2.1:-34248833 MS.gene071353:CDS
AAGATAATGCCTTGTCTAGT+CGG 0.489104 2.1:-34250502 MS.gene071353:CDS
AGCAGGGAAGAGAAGTAAAT+GGG 0.489503 2.1:-34250693 MS.gene071353:CDS
ATTCTGTGTGAGAAGCTAAC+CGG 0.489721 2.1:-34248876 MS.gene071353:CDS
AGTAAAAGAATCGGCACCTC+CGG 0.492013 2.1:+34248917 None:intergenic
TGAAGGTACACATATAGTAA+AGG 0.494494 2.1:-34250789 MS.gene071353:CDS
GTAACATCTCCGACGGTAGT+AGG 0.494824 2.1:+34248105 None:intergenic
ACCAGCCCATATGTTGTAGT+TGG 0.500721 2.1:+34248848 None:intergenic
GATGAAGAAGGAGTACCTAC+AGG 0.503271 2.1:-34250551 MS.gene071353:CDS
GTAAAGGGTGAAAATGAAGA+AGG 0.507431 2.1:-34250773 MS.gene071353:CDS
TTTGGTGAAAGTAAAAGAAT+CGG 0.514220 2.1:+34248908 None:intergenic
AATGGCCGTGGTGGACGGAA+TGG 0.517144 2.1:-34248252 MS.gene071353:CDS
AGATAATGCCTTGTCTAGTC+GGG 0.519054 2.1:-34250501 MS.gene071353:CDS
AGACTCTGGTTTCACGGTCA+AGG 0.523350 2.1:-34248819 MS.gene071353:CDS
TATCAACCATGAGTGTTGGC+TGG 0.527744 2.1:+34248940 None:intergenic
CCAACACTCATGGTTGATAC+CGG 0.530855 2.1:-34248936 MS.gene071353:CDS
GCCTAGCACTACAATGGCCG+TGG 0.533427 2.1:-34248264 MS.gene071353:intron
AAAGTTGCTACAATGTTTCA+GGG 0.533512 2.1:-34250527 MS.gene071353:CDS
ACCAACTACAACATATGGGC+TGG 0.533750 2.1:-34248849 MS.gene071353:CDS
TGCAGTCCAGCCAACACTCA+TGG 0.536198 2.1:-34248946 MS.gene071353:CDS
TGCTTTACAATCAGTTCTTG+AGG 0.537334 2.1:+34250733 None:intergenic
CGGTAGAAGATGATGGCTGA+TGG 0.540369 2.1:+34248037 None:intergenic
GGCTGGACTGCAGAGGTCGT+CGG 0.540405 2.1:+34248957 None:intergenic
CACTTACTGTTTCAAAAGCA+GGG 0.542698 2.1:-34250709 MS.gene071353:CDS
AACTCATTGTAATCAGCGGC+CGG 0.545931 2.1:+34248078 None:intergenic
GTACATGGATAATGAGTATG+TGG 0.550566 2.1:-34251050 MS.gene071353:CDS
TAAAGGGTGAAAATGAAGAA+GGG 0.554329 2.1:-34250772 MS.gene071353:CDS
CAGAAGAAGAAATCTTGATG+TGG 0.562451 2.1:-34250453 MS.gene071353:CDS
AACAACCAACTACAACATAT+GGG 0.565454 2.1:-34248853 MS.gene071353:CDS
GCAACAACGGTAGAAGATGA+TGG 0.565543 2.1:+34248030 None:intergenic
GGCCGTGGTGGACGGAATGG+AGG 0.568462 2.1:-34248249 MS.gene071353:CDS
TGCAACTATTGCAACCGCTA+CGG 0.568695 2.1:-34248201 MS.gene071353:CDS
ATTGTAGCAACTTTCCCTGT+AGG 0.569258 2.1:+34250536 None:intergenic
CAATGTTCACAATCATGGAA+TGG 0.570975 2.1:-34250654 MS.gene071353:intron
CCAGCAATCCCGACTAGACA+AGG 0.573610 2.1:+34250493 None:intergenic
TGAGCAACGACAACAACTCT+AGG 0.573821 2.1:+34248129 None:intergenic
CCGGTATCAACCATGAGTGT+TGG 0.573948 2.1:+34248936 None:intergenic
AGAAGAAGAAATCTTGATGT+GGG 0.574210 2.1:-34250452 MS.gene071353:CDS
AATCGATTATGTTTAGCAGG+TGG 0.579440 2.1:+34252940 None:intergenic
ACACATCATCAACTATCTCA+TGG 0.582009 2.1:+34250999 None:intergenic
ACTACAATGGCCGTGGTGGA+CGG 0.583288 2.1:-34248257 MS.gene071353:CDS
GATGGGCTGCTTTGAACTGA+AGG 0.583613 2.1:+34248055 None:intergenic
TTGTGAAAGAAATCAACACT+TGG 0.595475 2.1:+34253050 None:intergenic
CGCACAGAATCAAGTTCTGG+TGG 0.616545 2.1:+34248414 None:intergenic
TATGGAATTTGACTCCATTG+TGG 0.618496 2.1:-34250909 MS.gene071353:CDS
GGTAGAAGATGATGGCTGAT+GGG 0.627265 2.1:+34248038 None:intergenic
GTTGTTGCATCACTAGTGAA+AGG 0.627947 2.1:+34248489 None:intergenic
TGTGAACAACGTTGTAGAGA+CGG 0.628390 2.1:+34248601 None:intergenic
GCTCTTGCCTAGCACTACAA+TGG 0.628631 2.1:-34248270 MS.gene071353:intron
TAGCACTACAATGGCCGTGG+TGG 0.632824 2.1:-34248261 MS.gene071353:CDS
ATGAAGAAGGAGTACCTACA+GGG 0.636491 2.1:-34250550 MS.gene071353:CDS
GTTAAACAATCCAAACTACT+CGG 0.642167 2.1:-34252889 MS.gene071353:CDS
CAGCTTCAATATGGCCGTAG+CGG 0.642261 2.1:+34248187 None:intergenic
ATGCTTGTATGCGCTAATGA+AGG 0.648792 2.1:-34250806 MS.gene071353:CDS
GTCCTCCATTCCGTCCACCA+CGG 0.666297 2.1:+34248247 None:intergenic
ACACTCATGGTTGATACCGG+AGG 0.669509 2.1:-34248933 MS.gene071353:CDS
GATTGATATAGTGATGCCAC+TGG 0.678540 2.1:+34252913 None:intergenic
CGGAATAGTAACATCTCCGA+CGG 0.678556 2.1:+34248098 None:intergenic
GAGTGTTGGCTGGACTGCAG+AGG 0.678834 2.1:+34248950 None:intergenic
AAGGAACTCATTGTAATCAG+CGG 0.679173 2.1:+34248074 None:intergenic
ACATAATCGATTCTCACCAG+TGG 0.684055 2.1:-34252929 MS.gene071353:CDS
CTTCATCAAACTTCTCAACG+AGG 0.692013 2.1:+34250567 None:intergenic
ATTACCAGACTACGCAACAA+CGG 0.699013 2.1:+34248017 None:intergenic
ACCGTGAAACCAGAGTCTGA+CGG 0.699862 2.1:+34248824 None:intergenic
GTTGCTCAACCTACTACCGT+CGG 0.705008 2.1:-34248114 MS.gene071353:CDS
TAGAAGAGAAGTTAACAGTG+AGG 0.712556 2.1:-34253007 MS.gene071353:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAATAATAATAATAATA+TGG + chr2.1:34249960-34249979 None:intergenic 0.0%
!!! AAAGATATTTTTTACTTATT+CGG - chr2.1:34248134-34248153 MS.gene071353:CDS 10.0%
!!! AATAAGTAAAAAATATCTTT+TGG + chr2.1:34248134-34248153 None:intergenic 10.0%
!!! ATTTTTTTTTTATATCCTAT+AGG - chr2.1:34250043-34250062 MS.gene071353:intron 10.0%
!!! TTAAAAGAAATGTTATTTAT+CGG - chr2.1:34248684-34248703 MS.gene071353:intron 10.0%
!! AGACAAATAAAAGAATATTA+TGG + chr2.1:34249863-34249882 None:intergenic 15.0%
!! ATATAAATAAACATTCAGTA+TGG - chr2.1:34251957-34251976 MS.gene071353:intron 15.0%
!! GTATTGCATAAAAAAAAATT+GGG + chr2.1:34250738-34250757 None:intergenic 15.0%
!! TATAAGAAAAAATAAACAGA+TGG - chr2.1:34251422-34251441 MS.gene071353:intron 15.0%
!! TGTATTGCATAAAAAAAAAT+TGG + chr2.1:34250739-34250758 None:intergenic 15.0%
!!! AAGATATTTTTTACTTATTC+GGG - chr2.1:34248135-34248154 MS.gene071353:CDS 15.0%
!!! AATAAAAAAGCATATAGATT+AGG - chr2.1:34251516-34251535 MS.gene071353:intron 15.0%
!!! AATAAAATGATAATGTATGA+TGG - chr2.1:34248796-34248815 MS.gene071353:CDS 15.0%
!!! ACAATGAAAGTATTTAATTA+TGG + chr2.1:34249914-34249933 None:intergenic 15.0%
!!! ATGGATTATATATATATAAC+TGG + chr2.1:34248642-34248661 None:intergenic 15.0%
!!! CAATGAAAGTATTTAATTAT+GGG + chr2.1:34249913-34249932 None:intergenic 15.0%
!!! GATAATACTAAATTTGATTT+TGG - chr2.1:34251101-34251120 MS.gene071353:intron 15.0%
!! ATAATAATAATAATATGGCG+TGG + chr2.1:34249955-34249974 None:intergenic 20.0%
!! ATAGAATGATAAATTTCTTC+TGG - chr2.1:34250773-34250792 MS.gene071353:CDS 20.0%
!! ATTAAGAAAGAGAAAAAAGA+AGG + chr2.1:34249084-34249103 None:intergenic 20.0%
!! GATTGAAATTAAATAAACTC+TGG + chr2.1:34251381-34251400 None:intergenic 20.0%
!! TAATTATATTTCAACGTGTT+TGG - chr2.1:34248608-34248627 MS.gene071353:CDS 20.0%
!! TAGAATGATAAATTTCTTCT+GGG - chr2.1:34250774-34250793 MS.gene071353:CDS 20.0%
!!! CACAATGTTTACTTTTAAAA+AGG - chr2.1:34249565-34249584 MS.gene071353:intron 20.0%
!!! TACTTTTAAAAAGGAAACTT+AGG - chr2.1:34249574-34249593 MS.gene071353:intron 20.0%
!!! TAGTGTAATTGATTTAACAA+TGG + chr2.1:34248661-34248680 None:intergenic 20.0%
!!! TCAGTAGTTATTTTCTTAAT+TGG - chr2.1:34248999-34249018 MS.gene071353:intron 20.0%
! AATACTTTCATTGTTCATTG+AGG - chr2.1:34249920-34249939 MS.gene071353:intron 25.0%
! ACAAGATAGATTGAAAATGA+TGG + chr2.1:34250912-34250931 None:intergenic 25.0%
! ACCAAATTGAGATTGTATAA+TGG + chr2.1:34252000-34252019 None:intergenic 25.0%
! ACCATTATACAATCTCAATT+TGG - chr2.1:34251996-34252015 MS.gene071353:intron 25.0%
! ATAAACAATGTTCACAATCA+TGG - chr2.1:34250456-34250475 MS.gene071353:CDS 25.0%
! ATTTAATTATGGGAGAAACA+TGG + chr2.1:34249903-34249922 None:intergenic 25.0%
! CATATACTTGTGTATACAAT+TGG + chr2.1:34251936-34251955 None:intergenic 25.0%
! CTGAATAATAACACCATAAA+CGG + chr2.1:34248983-34249002 None:intergenic 25.0%
! CTGTTATATTATGAGGTAAT+TGG + chr2.1:34251227-34251246 None:intergenic 25.0%
! GTTGTAGATAATAAAACCAT+CGG + chr2.1:34251632-34251651 None:intergenic 25.0%
! TAACTCATAAACCTTTCAAT+TGG + chr2.1:34249033-34249052 None:intergenic 25.0%
! TAGTAAGCTTGATTCTTTAA+AGG - chr2.1:34252583-34252602 MS.gene071353:intron 25.0%
! TATAAAGAGACTCTAAACTT+TGG + chr2.1:34251483-34251502 None:intergenic 25.0%
! TATTTGTCCTATTGTTGATA+TGG - chr2.1:34250188-34250207 MS.gene071353:intron 25.0%
! TCAAAATTGCTTAAGGTATA+GGG - chr2.1:34248446-34248465 MS.gene071353:CDS 25.0%
! TCAAATTCCATATCAACAAT+AGG + chr2.1:34250198-34250217 None:intergenic 25.0%
! TCATGAATACTCATTATTCA+TGG - chr2.1:34250012-34250031 MS.gene071353:intron 25.0%
! TCCATCATATATATTCTCAA+TGG - chr2.1:34251181-34251200 MS.gene071353:intron 25.0%
! TTTGGTGAAAGTAAAAGAAT+CGG + chr2.1:34252210-34252229 None:intergenic 25.0%
!! AACTTTTAGATGTTGAGTAT+AGG + chr2.1:34251667-34251686 None:intergenic 25.0%
!! AAGTTTAGAGTCTCTTTATA+TGG - chr2.1:34251483-34251502 MS.gene071353:intron 25.0%
!! ATCTTCTTTAGAAAACTATC+TGG + chr2.1:34251593-34251612 None:intergenic 25.0%
!! CATTTTCAATCTATCTTGTT+TGG - chr2.1:34250913-34250932 MS.gene071353:CDS 25.0%
!! GACTTGGAATTTTCTAAATT+TGG + chr2.1:34250156-34250175 None:intergenic 25.0%
!! TATATATATCCAAGCCTTTT+AGG + chr2.1:34249394-34249413 None:intergenic 25.0%
!! TATATTGCTGACTAAAATCA+TGG + chr2.1:34251263-34251282 None:intergenic 25.0%
!! TTTTATATCCTATAGGTACA+TGG - chr2.1:34250050-34250069 MS.gene071353:intron 25.0%
!!! AGATTGTCGTATCAATTTTT+TGG - chr2.1:34250811-34250830 MS.gene071353:CDS 25.0%
!!! AGTTTTTTGAGACAGAAATA+AGG - chr2.1:34248378-34248397 MS.gene071353:CDS 25.0%
!!! ATCATACTTGTTGGTTTTAT+AGG + chr2.1:34250860-34250879 None:intergenic 25.0%
!!! TTATTTTCTTTTGACTCAAG+TGG + chr2.1:34248781-34248800 None:intergenic 25.0%
!!! TTCTTTGAAATTGGAGAATA+TGG - chr2.1:34252544-34252563 MS.gene071353:intron 25.0%
!!! TTTTCTAAAGAAGATCTACT+TGG - chr2.1:34251598-34251617 MS.gene071353:intron 25.0%
AAAATGTTGACAGCAAACTA+AGG - chr2.1:34248832-34248851 MS.gene071353:CDS 30.0%
AAAGTTGCTACAATGTTTCA+GGG - chr2.1:34250588-34250607 MS.gene071353:CDS 30.0%
AAATCCAATAGAGAAAGAGA+TGG - chr2.1:34248755-34248774 MS.gene071353:CDS 30.0%
AAATGGCATATCATACTTGT+TGG + chr2.1:34250869-34250888 None:intergenic 30.0%
AACAACCAACTACAACATAT+GGG - chr2.1:34252262-34252281 MS.gene071353:intron 30.0%
AACCGTATGATTAATAGATC+TGG + chr2.1:34249545-34249564 None:intergenic 30.0%
AATAAGTCAAGAAAGGAACT+TGG - chr2.1:34248347-34248366 MS.gene071353:intron 30.0%
AATGATAAATTTCTTCTGGG+TGG - chr2.1:34250777-34250796 MS.gene071353:CDS 30.0%
AGAAGAAGAAATCTTGATGT+GGG - chr2.1:34250663-34250682 MS.gene071353:CDS 30.0%
ATAAGTCAAGAAAGGAACTT+GGG - chr2.1:34248348-34248367 MS.gene071353:intron 30.0%
ATGAACAATGGCAATATCTT+TGG + chr2.1:34252348-34252367 None:intergenic 30.0%
CAGATTCATCTACGTTAATA+GGG + chr2.1:34249318-34249337 None:intergenic 30.0%
CAGTAGATCCAGATAAAATT+TGG + chr2.1:34252730-34252749 None:intergenic 30.0%
CATACATCAACAACTTCAAT+TGG - chr2.1:34251310-34251329 MS.gene071353:intron 30.0%
CATAGCAAGTAATTAAAGCT+TGG + chr2.1:34252451-34252470 None:intergenic 30.0%
CCAAAATTCAGTACCAATAT+TGG + chr2.1:34251080-34251099 None:intergenic 30.0%
CCTAATCTCAAAATTGCTTA+AGG - chr2.1:34248439-34248458 MS.gene071353:CDS 30.0%
CCTATTTCCTTCTTTAATAC+GGG - chr2.1:34248954-34248973 MS.gene071353:CDS 30.0%
CTAATTATGAGAAAGCAGAT+TGG + chr2.1:34250505-34250524 None:intergenic 30.0%
CTCAAAATTGCTTAAGGTAT+AGG - chr2.1:34248445-34248464 MS.gene071353:CDS 30.0%
CTTTGTCCATAAAATCTTGA+GGG + chr2.1:34249750-34249769 None:intergenic 30.0%
GAATGCAAATAAGTCAAGAA+AGG - chr2.1:34248340-34248359 MS.gene071353:intron 30.0%
GCCATTGAGAATATATATGA+TGG + chr2.1:34251185-34251204 None:intergenic 30.0%
GCCTATTTCCTTCTTTAATA+CGG - chr2.1:34248953-34248972 MS.gene071353:CDS 30.0%
GTAATTGGTTGTCATGTTAT+TGG + chr2.1:34251212-34251231 None:intergenic 30.0%
GTATGATTAATAGATCTGGA+CGG + chr2.1:34249541-34249560 None:intergenic 30.0%
GTCCAGATCTATTAATCATA+CGG - chr2.1:34249540-34249559 MS.gene071353:intron 30.0%
GTTAAACAATCCAAACTACT+CGG - chr2.1:34248226-34248245 MS.gene071353:CDS 30.0%
TAAACGAATTGAACTTGAGT+TGG - chr2.1:34249195-34249214 MS.gene071353:intron 30.0%
TAAAGGGTGAAAATGAAGAA+GGG - chr2.1:34250343-34250362 MS.gene071353:intron 30.0%
TAATTAGAGACAAGCCTAAA+AGG - chr2.1:34249377-34249396 MS.gene071353:intron 30.0%
TACCTCATAATATAACAGCA+AGG - chr2.1:34251229-34251248 MS.gene071353:intron 30.0%
TCAGATTCATCTACGTTAAT+AGG + chr2.1:34249319-34249338 None:intergenic 30.0%
TCTCCAATTTCAAAGAATTG+AGG + chr2.1:34252541-34252560 None:intergenic 30.0%
TCTTGTTAAACCAAAGGAAA+GGG + chr2.1:34251837-34251856 None:intergenic 30.0%
TGCTATTGAAAACCATAGAA+CGG + chr2.1:34252408-34252427 None:intergenic 30.0%
TTCTTGTTAAACCAAAGGAA+AGG + chr2.1:34251838-34251857 None:intergenic 30.0%
TTGAAAATGATGGTTCAATC+CGG + chr2.1:34250902-34250921 None:intergenic 30.0%
TTGTGAAAGAAATCAACACT+TGG + chr2.1:34248068-34248087 None:intergenic 30.0%
! ATAGGACAAATATTAGCTTC+AGG + chr2.1:34250180-34250199 None:intergenic 30.0%
! CTTTTTCCCTCAAGATTTTA+TGG - chr2.1:34249741-34249760 MS.gene071353:intron 30.0%
! GAACTATTTTCGAATTGGTT+CGG + chr2.1:34248483-34248502 None:intergenic 30.0%
! GAAGGTACACATATAGTAAA+GGG - chr2.1:34250327-34250346 MS.gene071353:intron 30.0%
! GAATTCTTTTACATCCACAA+TGG + chr2.1:34250223-34250242 None:intergenic 30.0%
! GTTGATTCTTGTTAAACCAA+AGG + chr2.1:34251843-34251862 None:intergenic 30.0%
! TGAAGGTACACATATAGTAA+AGG - chr2.1:34250326-34250345 MS.gene071353:intron 30.0%
! TTATTCGGGTTAAAAGAGAA+TGG - chr2.1:34248149-34248168 MS.gene071353:CDS 30.0%
!! AATTACTTGCTATGAAGTGT+AGG - chr2.1:34252457-34252476 MS.gene071353:intron 30.0%
!! ATCCTTGCTGTTATATTATG+AGG + chr2.1:34251234-34251253 None:intergenic 30.0%
!! CATCCTCAATTCTTTGAAAT+TGG - chr2.1:34252535-34252554 MS.gene071353:intron 30.0%
!! CATTTACTCTGCTTTATTTG+TGG + chr2.1:34251742-34251761 None:intergenic 30.0%
!! CCAATATTGGTACTGAATTT+TGG - chr2.1:34251077-34251096 MS.gene071353:intron 30.0%
!! GGAACTTGTAAAGTACTTTT+AGG - chr2.1:34248247-34248266 MS.gene071353:CDS 30.0%
!! TGGTTTTTAGACCAATTGAA+AGG - chr2.1:34249019-34249038 MS.gene071353:intron 30.0%
!!! CCTTAAGCAATTTTGAGATT+AGG + chr2.1:34248442-34248461 None:intergenic 30.0%
AAATAGTTCGAGACTCGATT+CGG - chr2.1:34248494-34248513 MS.gene071353:CDS 35.0%
AACTCCAAAACCTTCTTTCT+TGG + chr2.1:34250259-34250278 None:intergenic 35.0%
AAGATAATGCCTTGTCTAGT+CGG - chr2.1:34250613-34250632 MS.gene071353:intron 35.0%
AAGGAACTCATTGTAATCAG+CGG + chr2.1:34253044-34253063 None:intergenic 35.0%
AAGTTGTTGATGTATGTGCT+CGG + chr2.1:34251306-34251325 None:intergenic 35.0%
AATCGATTATGTTTAGCAGG+TGG + chr2.1:34248178-34248197 None:intergenic 35.0%
ACACATCATCAACTATCTCA+TGG + chr2.1:34250119-34250138 None:intergenic 35.0%
ACACGTGAAAGACAATCATA+TGG + chr2.1:34249825-34249844 None:intergenic 35.0%
ATAAATTTCTTCTGGGTGGA+TGG - chr2.1:34250781-34250800 MS.gene071353:CDS 35.0%
ATGAAGAACTCATAAGAGCA+AGG - chr2.1:34248303-34248322 MS.gene071353:intron 35.0%
ATTAATAGATCTGGACGGTT+GGG + chr2.1:34249536-34249555 None:intergenic 35.0%
ATTGTCTTTCACGTGTCAAT+AGG - chr2.1:34249829-34249848 MS.gene071353:intron 35.0%
CAATGTTCACAATCATGGAA+TGG - chr2.1:34250461-34250480 MS.gene071353:CDS 35.0%
CACACACACATATATGAGAT+AGG - chr2.1:34249468-34249487 MS.gene071353:intron 35.0%
CACATTGGAAGTTTACATCA+GGG - chr2.1:34248899-34248918 MS.gene071353:CDS 35.0%
CACTTACTGTTTCAAAAGCA+GGG - chr2.1:34250406-34250425 MS.gene071353:intron 35.0%
CAGAAGAAGAAATCTTGATG+TGG - chr2.1:34250662-34250681 MS.gene071353:CDS 35.0%
CCATTGTTCATCACACAAAA+TGG - chr2.1:34252357-34252376 MS.gene071353:intron 35.0%
CCCGTATTAAAGAAGGAAAT+AGG + chr2.1:34248957-34248976 None:intergenic 35.0%
CGACTCGATAAGAATTTACT+CGG + chr2.1:34249257-34249276 None:intergenic 35.0%
CTCATTATCCATGTACCTAT+AGG + chr2.1:34250061-34250080 None:intergenic 35.0%
CTGATGTAAACTTCCAATGT+GGG + chr2.1:34248900-34248919 None:intergenic 35.0%
CTTGACTTATTTGCATTCCT+GGG + chr2.1:34248338-34248357 None:intergenic 35.0%
GAAAAAAGAAGGAGAAACTG+TGG + chr2.1:34249073-34249092 None:intergenic 35.0%
GAAAGTTGCTACAATGTTTC+AGG - chr2.1:34250587-34250606 MS.gene071353:CDS 35.0%
GAACAACCAACTACAACATA+TGG - chr2.1:34252261-34252280 MS.gene071353:intron 35.0%
GAGAATCGATTATGTTTAGC+AGG + chr2.1:34248181-34248200 None:intergenic 35.0%
GATAATAAAACCATCGGAGA+TGG + chr2.1:34251626-34251645 None:intergenic 35.0%
GCTTTGTCCATAAAATCTTG+AGG + chr2.1:34249751-34249770 None:intergenic 35.0%
GGTGTACTCAATTGATCTTA+GGG + chr2.1:34249782-34249801 None:intergenic 35.0%
GTAAAGGGTGAAAATGAAGA+AGG - chr2.1:34250342-34250361 MS.gene071353:intron 35.0%
GTACATGGATAATGAGTATG+TGG - chr2.1:34250065-34250084 MS.gene071353:intron 35.0%
GTGTACTCAATTGATCTTAG+GGG + chr2.1:34249781-34249800 None:intergenic 35.0%
GTTCTTGCTGCAATGATATT+TGG + chr2.1:34251788-34251807 None:intergenic 35.0%
GTTGAGAAGTTTGATGAAGA+AGG - chr2.1:34250552-34250571 MS.gene071353:CDS 35.0%
TACGACAATCAGCTTCAATA+TGG + chr2.1:34252940-34252959 None:intergenic 35.0%
TAGAAGAGAAGTTAACAGTG+AGG - chr2.1:34248108-34248127 MS.gene071353:CDS 35.0%
TAGTGAACAATTGTTGCGAT+TGG - chr2.1:34252769-34252788 MS.gene071353:intron 35.0%
TATGGAATTTGACTCCATTG+TGG - chr2.1:34250206-34250225 MS.gene071353:intron 35.0%
TATGTTGTAGTTGGTTGTTC+CGG + chr2.1:34252261-34252280 None:intergenic 35.0%
TCACTAACTGTCTCATAATC+AGG + chr2.1:34252755-34252774 None:intergenic 35.0%
TCACTGTTAACTTCTCTTCT+AGG + chr2.1:34248109-34248128 None:intergenic 35.0%
TCACTTACTGTTTCAAAAGC+AGG - chr2.1:34250405-34250424 MS.gene071353:intron 35.0%
TCTTGACTTATTTGCATTCC+TGG + chr2.1:34248339-34248358 None:intergenic 35.0%
TGCTTTACAATCAGTTCTTG+AGG + chr2.1:34250385-34250404 None:intergenic 35.0%
TTAATACGGGAATCCGTTTA+TGG - chr2.1:34248967-34248986 MS.gene071353:CDS 35.0%
TTCAGGAACTAGCTACTATT+AGG - chr2.1:34248858-34248877 MS.gene071353:CDS 35.0%
TTGCTATGAAGTGTAGGAAA+AGG - chr2.1:34252463-34252482 MS.gene071353:intron 35.0%
TTTACAAGTTCCGAGTAGTT+TGG + chr2.1:34248239-34248258 None:intergenic 35.0%
TTTCACGTGTCAATAGGAAT+TGG - chr2.1:34249835-34249854 MS.gene071353:intron 35.0%
! AATATTAGCTTCAGGTGACT+TGG + chr2.1:34250172-34250191 None:intergenic 35.0%
! ATCGAAAATGTTGGCTGAAT+GGG + chr2.1:34251041-34251060 None:intergenic 35.0%
! CCATTTTGTGTGATGAACAA+TGG + chr2.1:34252360-34252379 None:intergenic 35.0%
! GTCTCGAACTATTTTCGAAT+TGG + chr2.1:34248488-34248507 None:intergenic 35.0%
! TATCGAAAATGTTGGCTGAA+TGG + chr2.1:34251042-34251061 None:intergenic 35.0%
! TTTGCCAAGAAAGAAGGTTT+TGG - chr2.1:34250252-34250271 MS.gene071353:intron 35.0%
!! ATGATATTTGGTACTGGTTG+TGG + chr2.1:34251776-34251795 None:intergenic 35.0%
!! TTGCTGTCAACATTTTCAAG+TGG + chr2.1:34248828-34248847 None:intergenic 35.0%
!!! AACTCAAGTTTTGACTCGTT+TGG + chr2.1:34248549-34248568 None:intergenic 35.0%
!!! TGCTGTCAACATTTTCAAGT+GGG + chr2.1:34248827-34248846 None:intergenic 35.0%
AAAACCATAGAACGGTGCAT+AGG + chr2.1:34252400-34252419 None:intergenic 40.0%
AAACCATAGAACGGTGCATA+GGG + chr2.1:34252399-34252418 None:intergenic 40.0%
AACCACTGCACAACGTTTAT+TGG - chr2.1:34251706-34251725 MS.gene071353:intron 40.0%
AACTCATAAGAGCAAGGACA+AGG - chr2.1:34248309-34248328 MS.gene071353:intron 40.0%
AAGCAGGGAAGAGAAGTAAA+TGG - chr2.1:34250421-34250440 MS.gene071353:intron 40.0%
ACACAGAATGAGCGAAACTT+TGG + chr2.1:34252228-34252247 None:intergenic 40.0%
ACAGCAAACTAAGGTCATTC+AGG - chr2.1:34248841-34248860 MS.gene071353:CDS 40.0%
ACATCGTTTGCCAAGAAAGA+AGG - chr2.1:34250246-34250265 MS.gene071353:intron 40.0%
ACGGATTCCCGTATTAAAGA+AGG + chr2.1:34248964-34248983 None:intergenic 40.0%
ACTCATAAGAGCAAGGACAA+GGG - chr2.1:34248310-34248329 MS.gene071353:intron 40.0%
AGATAATGCCTTGTCTAGTC+GGG - chr2.1:34250614-34250633 MS.gene071353:intron 40.0%
AGCAGGGAAGAGAAGTAAAT+GGG - chr2.1:34250422-34250441 MS.gene071353:intron 40.0%
AGCTGCTGTATCGAAAATGT+TGG + chr2.1:34251050-34251069 None:intergenic 40.0%
AGTAACCCTGCCATTACAAA+CGG - chr2.1:34252061-34252080 MS.gene071353:intron 40.0%
AGTACACCGTCAAAAACAAG+TGG - chr2.1:34249794-34249813 MS.gene071353:intron 40.0%
ATCAAAACCTCAAGACAACG+CGG + chr2.1:34249640-34249659 None:intergenic 40.0%
ATGCTTGTATGCGCTAATGA+AGG - chr2.1:34250309-34250328 MS.gene071353:intron 40.0%
ATTCTGTGTGAGAAGCTAAC+CGG - chr2.1:34252239-34252258 MS.gene071353:intron 40.0%
ATTGTAGCAACTTTCCCTGT+AGG + chr2.1:34250582-34250601 None:intergenic 40.0%
CCACATTGGAAGTTTACATC+AGG - chr2.1:34248898-34248917 MS.gene071353:CDS 40.0%
CCTGATGTAAACTTCCAATG+TGG + chr2.1:34248901-34248920 None:intergenic 40.0%
CGGTGTACTCAATTGATCTT+AGG + chr2.1:34249783-34249802 None:intergenic 40.0%
CGTGAAAGACAATCATATGG+CGG + chr2.1:34249822-34249841 None:intergenic 40.0%
CTCAATTGATCTTAGGGGAA+AGG + chr2.1:34249776-34249795 None:intergenic 40.0%
CTTCATCAAACTTCTCAACG+AGG + chr2.1:34250551-34250570 None:intergenic 40.0%
GATTAATAGATCTGGACGGT+TGG + chr2.1:34249537-34249556 None:intergenic 40.0%
GATTGATATAGTGATGCCAC+TGG + chr2.1:34248205-34248224 None:intergenic 40.0%
GCAAGAGCAGATGAATCATT+AGG + chr2.1:34252833-34252852 None:intergenic 40.0%
GCAGATGAATCATTAGGAGA+TGG + chr2.1:34252827-34252846 None:intergenic 40.0%
GCTGCAATGATATTTGGTAC+TGG + chr2.1:34251782-34251801 None:intergenic 40.0%
GTTGTTGCATCACTAGTGAA+AGG + chr2.1:34252629-34252648 None:intergenic 40.0%
TGAATCATTAGGAGATGGAG+TGG + chr2.1:34252822-34252841 None:intergenic 40.0%
TGTGAACAACGTTGTAGAGA+CGG + chr2.1:34252517-34252536 None:intergenic 40.0%
TTAAAGCTTGGTACTGTGCT+TGG + chr2.1:34252439-34252458 None:intergenic 40.0%
TTCATCTACGTTAATAGGGC+TGG + chr2.1:34249314-34249333 None:intergenic 40.0%
TTCTTCTTTGCCCTTTCCTT+TGG - chr2.1:34251824-34251843 MS.gene071353:intron 40.0%
! AATGGTTAGTCCTAAGAGTG+TGG - chr2.1:34250479-34250498 MS.gene071353:CDS 40.0%
! ACAACGCAGCAAGTTTTTCA+TGG - chr2.1:34252658-34252677 MS.gene071353:intron 40.0%
! ACATAATCGATTCTCACCAG+TGG - chr2.1:34248186-34248205 MS.gene071353:CDS 40.0%
! CAGCAAGTTTTTCATGGTCA+TGG - chr2.1:34252664-34252683 MS.gene071353:intron 40.0%
! GTGCGCAACCAAATTTTATC+TGG - chr2.1:34252719-34252738 MS.gene071353:intron 40.0%
!! AAGAAAGGAACTTGGGTTGA+AGG - chr2.1:34248355-34248374 MS.gene071353:intron 40.0%
!! ATGAAGAAGGAGTACCTACA+GGG - chr2.1:34250565-34250584 MS.gene071353:CDS 40.0%
!! GAAAAACTTGCTGCGTTGTT+CGG + chr2.1:34252657-34252676 None:intergenic 40.0%
!! GGCAATATCTTTGGCTTGTT+TGG + chr2.1:34252339-34252358 None:intergenic 40.0%
!!! AAGGTTTTGGAGTTCGTGTT+CGG - chr2.1:34250265-34250284 MS.gene071353:intron 40.0%
AACTCATTGTAATCAGCGGC+CGG + chr2.1:34253040-34253059 None:intergenic 45.0%
ACCAACTACAACATATGGGC+TGG - chr2.1:34252266-34252285 MS.gene071353:intron 45.0%
ACCAGCCCATATGTTGTAGT+TGG + chr2.1:34252270-34252289 None:intergenic 45.0%
AGACTCAGAAGTCGTTTGAC+TGG - chr2.1:34250956-34250975 MS.gene071353:CDS 45.0%
AGAGACAAGCCTAAAAGGCT+TGG - chr2.1:34249382-34249401 MS.gene071353:intron 45.0%
AGATAGGATCCGTTGACACT+AGG - chr2.1:34249484-34249503 MS.gene071353:intron 45.0%
AGTAAAAGAATCGGCACCTC+CGG + chr2.1:34252201-34252220 None:intergenic 45.0%
AGTCAAGCTCGCAAACAACT+TGG + chr2.1:34249134-34249153 None:intergenic 45.0%
ATGATGGTTCAATCCGGTGA+AGG + chr2.1:34250896-34250915 None:intergenic 45.0%
CGGAATAGTAACATCTCCGA+CGG + chr2.1:34253020-34253039 None:intergenic 45.0%
CGTCGGAGATGTTACTATTC+CGG - chr2.1:34253018-34253037 MS.gene071353:CDS 45.0%
GAAATAAGGTCATCTGTCCC+AGG - chr2.1:34248392-34248411 MS.gene071353:CDS 45.0%
GCAACAACGGTAGAAGATGA+TGG + chr2.1:34253088-34253107 None:intergenic 45.0%
GCAGCTCATTCAGCCAATAT+TGG - chr2.1:34251064-34251083 MS.gene071353:intron 45.0%
GTGGCCATCTCTTTCTCTAT+TGG + chr2.1:34248762-34248781 None:intergenic 45.0%
TGAGACGAACCTATTGGTAG+TGG + chr2.1:34252136-34252155 None:intergenic 45.0%
TGAGCAACGACAACAACTCT+AGG + chr2.1:34252989-34253008 None:intergenic 45.0%
TGATGGTTCAATCCGGTGAA+GGG + chr2.1:34250895-34250914 None:intergenic 45.0%
TGCAACTATTGCAACCGCTA+CGG - chr2.1:34252914-34252933 MS.gene071353:CDS 45.0%
TGCCAATAAACGTTGTGCAG+TGG + chr2.1:34251711-34251730 None:intergenic 45.0%
TTCATGGTCATGGCTCTTGT+TGG - chr2.1:34252674-34252693 MS.gene071353:intron 45.0%
TTGCGCACAGAATCAAGTTC+TGG + chr2.1:34252707-34252726 None:intergenic 45.0%
TTGGTACTGTGCTTGGAGAT+GGG + chr2.1:34252432-34252451 None:intergenic 45.0%
TTGTAATGGCAGGGTTACTG+AGG + chr2.1:34252060-34252079 None:intergenic 45.0%
TTGTTGATGTATGTGCTCGG+TGG + chr2.1:34251303-34251322 None:intergenic 45.0%
! ATGACCAAAAGCATGAGGTG+TGG + chr2.1:34252795-34252814 None:intergenic 45.0%
! CCAACACTCATGGTTGATAC+CGG - chr2.1:34252179-34252198 MS.gene071353:intron 45.0%
! GAGACATGACCAAAAGCATG+AGG + chr2.1:34252800-34252819 None:intergenic 45.0%
! GGTAGAAGATGATGGCTGAT+GGG + chr2.1:34253080-34253099 None:intergenic 45.0%
!! AATTGGTGTCGACGAATTCG+TGG + chr2.1:34249513-34249532 None:intergenic 45.0%
!! GATGAAGAAGGAGTACCTAC+AGG - chr2.1:34250564-34250583 MS.gene071353:CDS 45.0%
!! TATCAACCATGAGTGTTGGC+TGG + chr2.1:34252178-34252197 None:intergenic 45.0%
AAGGTGCAGAACCTTCTCCT+CGG + chr2.1:34249690-34249709 None:intergenic 50.0%
ACCGTGAAACCAGAGTCTGA+CGG + chr2.1:34252294-34252313 None:intergenic 50.0%
AGATCTGGACGGTTGGGAAT+TGG + chr2.1:34249530-34249549 None:intergenic 50.0%
AGTGGCCGTTTGTAATGGCA+GGG + chr2.1:34252069-34252088 None:intergenic 50.0%
CAGCTTCAATATGGCCGTAG+CGG + chr2.1:34252931-34252950 None:intergenic 50.0%
CATCCCTATGCACCGTTCTA+TGG - chr2.1:34252393-34252412 MS.gene071353:intron 50.0%
CCGGTATCAACCATGAGTGT+TGG + chr2.1:34252182-34252201 None:intergenic 50.0%
CGTTGTGCAGTGGTTTCAGA+AGG + chr2.1:34251701-34251720 None:intergenic 50.0%
CTACTTGGTACCATCTCCGA+TGG - chr2.1:34251613-34251632 MS.gene071353:intron 50.0%
CTTGGTACTGTGCTTGGAGA+TGG + chr2.1:34252433-34252452 None:intergenic 50.0%
GAAAACTCACGCGATGACGA+AGG + chr2.1:34249709-34249728 None:intergenic 50.0%
GCAGTTCACTAGTCCCACAT+TGG - chr2.1:34248884-34248903 MS.gene071353:CDS 50.0%
GCTCTTGCCTAGCACTACAA+TGG - chr2.1:34252845-34252864 MS.gene071353:intron 50.0%
GTAACATCTCCGACGGTAGT+AGG + chr2.1:34253013-34253032 None:intergenic 50.0%
GTTGCTCAACCTACTACCGT+CGG - chr2.1:34253001-34253020 MS.gene071353:CDS 50.0%
TCGGAGTGAGACGAACCTAT+TGG + chr2.1:34252142-34252161 None:intergenic 50.0%
TCGTGGACACCTAGTGTCAA+CGG + chr2.1:34249496-34249515 None:intergenic 50.0%
TGCTCAGTGGCCGTTTGTAA+TGG + chr2.1:34252074-34252093 None:intergenic 50.0%
TGGTACTGTGCTTGGAGATG+GGG + chr2.1:34252431-34252450 None:intergenic 50.0%
! AATCCGGTGAAGGGTGCAAA+TGG + chr2.1:34250886-34250905 None:intergenic 50.0%
! ACACTCATGGTTGATACCGG+AGG - chr2.1:34252182-34252201 MS.gene071353:intron 50.0%
! AGACTCTGGTTTCACGGTCA+AGG - chr2.1:34252296-34252315 MS.gene071353:intron 50.0%
! AGCAGATTGGCCACACTCTT+AGG + chr2.1:34250492-34250511 None:intergenic 50.0%
! AGGCCTTTTGTGATGACCAG+CGG + chr2.1:34248422-34248441 None:intergenic 50.0%
! ATGCCATTTGCACCCTTCAC+CGG - chr2.1:34250880-34250899 MS.gene071353:CDS 50.0%
! CGCACAGAATCAAGTTCTGG+TGG + chr2.1:34252704-34252723 None:intergenic 50.0%
! CGGTAGAAGATGATGGCTGA+TGG + chr2.1:34253081-34253100 None:intergenic 50.0%
! CTTTTCTCCGCGTTGTCTTG+AGG - chr2.1:34249630-34249649 MS.gene071353:intron 50.0%
! TTGGCCACACCTCATGCTTT+TGG - chr2.1:34252788-34252807 MS.gene071353:intron 50.0%
!! ACCTATTGGTAGTGGCACAC+CGG + chr2.1:34252128-34252147 None:intergenic 50.0%
!! GATGGGCTGCTTTGAACTGA+AGG + chr2.1:34253063-34253082 None:intergenic 50.0%
!!! GCGGTGCCACTTGTTTTTGA+CGG + chr2.1:34249803-34249822 None:intergenic 50.0%
ACCACGGCCATTGTAGTGCT+AGG + chr2.1:34252855-34252874 None:intergenic 55.0%
CAGAGATGAGGGTTGCTCAG+TGG + chr2.1:34252087-34252106 None:intergenic 55.0%
CAGTGGCCGTTTGTAATGGC+AGG + chr2.1:34252070-34252089 None:intergenic 55.0%
CCAGCAATCCCGACTAGACA+AGG + chr2.1:34250625-34250644 None:intergenic 55.0%
CCTTGTCTAGTCGGGATTGC+TGG - chr2.1:34250622-34250641 MS.gene071353:intron 55.0%
GCTCCGCTGGTCATCACAAA+AGG - chr2.1:34248416-34248435 MS.gene071353:CDS 55.0%
TAGCACTACAATGGCCGTGG+TGG - chr2.1:34252854-34252873 MS.gene071353:intron 55.0%
TGCAGTCCAGCCAACACTCA+TGG - chr2.1:34252169-34252188 MS.gene071353:intron 55.0%
! ACTACAATGGCCGTGGTGGA+CGG - chr2.1:34252858-34252877 MS.gene071353:intron 55.0%
! GCCGTCAGACTCTGGTTTCA+CGG - chr2.1:34252290-34252309 MS.gene071353:intron 55.0%
! TCCGGTGTGCCACTACCAAT+AGG - chr2.1:34252124-34252143 MS.gene071353:intron 55.0%
! TGTATGTGCTCGGTGGTTGC+TGG + chr2.1:34251296-34251315 None:intergenic 55.0%
!! ATTGGTAGTGGCACACCGGA+GGG + chr2.1:34252124-34252143 None:intergenic 55.0%
!! TATTGGTAGTGGCACACCGG+AGG + chr2.1:34252125-34252144 None:intergenic 55.0%
AACCTTCTCCTCGGCGGCAA+TGG + chr2.1:34249681-34249700 None:intergenic 60.0%
ATGCGCGGTGGCAGAGATGA+GGG + chr2.1:34252098-34252117 None:intergenic 60.0%
GAGCAAGGACAAGGGATCCC+AGG - chr2.1:34248318-34248337 MS.gene071353:intron 60.0%
GCCTAGCACTACAATGGCCG+TGG - chr2.1:34252851-34252870 MS.gene071353:intron 60.0%
GTCCTCCATTCCGTCCACCA+CGG + chr2.1:34252871-34252890 None:intergenic 60.0%
GTGCAGAACCTTCTCCTCGG+CGG + chr2.1:34249687-34249706 None:intergenic 60.0%
TGATGACCAGCGGAGCTCCT+GGG + chr2.1:34248412-34248431 None:intergenic 60.0%
!! AATGGCCGTGGTGGACGGAA+TGG - chr2.1:34252863-34252882 MS.gene071353:intron 60.0%
!! GAGTGTTGGCTGGACTGCAG+AGG + chr2.1:34252168-34252187 None:intergenic 60.0%
ATCTGTCCCAGGAGCTCCGC+TGG - chr2.1:34248403-34248422 MS.gene071353:CDS 65.0%
CACACCGGAGGGAAGATGCG+CGG + chr2.1:34252113-34252132 None:intergenic 65.0%
CACCATTGCCGCCGAGGAGA+AGG - chr2.1:34249676-34249695 MS.gene071353:intron 65.0%
GATGCGCGGTGGCAGAGATG+AGG + chr2.1:34252099-34252118 None:intergenic 65.0%
GCAAGTCACCATTGCCGCCG+AGG - chr2.1:34249670-34249689 MS.gene071353:intron 65.0%
GGCTGGACTGCAGAGGTCGT+CGG + chr2.1:34252161-34252180 None:intergenic 65.0%
GTGATGACCAGCGGAGCTCC+TGG + chr2.1:34248413-34248432 None:intergenic 65.0%
ACCGGAGGGAAGATGCGCGG+TGG + chr2.1:34252110-34252129 None:intergenic 70.0%
GCCACCGCGCATCTTCCCTC+CGG - chr2.1:34252106-34252125 MS.gene071353:intron 70.0%
!! GGCCGTGGTGGACGGAATGG+AGG - chr2.1:34252866-34252885 MS.gene071353:intron 70.0%
!! GGGCTGGTGCCGTCAGACTC+TGG - chr2.1:34252282-34252301 MS.gene071353:intron 70.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 34248026 34253111 34248026 ID=MS.gene071353
chr2.1 mRNA 34248026 34253111 34248026 ID=MS.gene071353.t1;Parent=MS.gene071353
chr2.1 exon 34252879 34253111 34252879 ID=MS.gene071353.t1.exon1;Parent=MS.gene071353.t1
chr2.1 CDS 34252879 34253111 34252879 ID=cds.MS.gene071353.t1;Parent=MS.gene071353.t1
chr2.1 exon 34250655 34251072 34250655 ID=MS.gene071353.t1.exon2;Parent=MS.gene071353.t1
chr2.1 CDS 34250655 34251072 34250655 ID=cds.MS.gene071353.t1;Parent=MS.gene071353.t1
chr2.1 exon 34250439 34250612 34250439 ID=MS.gene071353.t1.exon3;Parent=MS.gene071353.t1
chr2.1 CDS 34250439 34250612 34250439 ID=cds.MS.gene071353.t1;Parent=MS.gene071353.t1
chr2.1 exon 34248752 34248991 34248752 ID=MS.gene071353.t1.exon4;Parent=MS.gene071353.t1
chr2.1 CDS 34248752 34248991 34248752 ID=cds.MS.gene071353.t1;Parent=MS.gene071353.t1
chr2.1 exon 34248371 34248658 34248371 ID=MS.gene071353.t1.exon5;Parent=MS.gene071353.t1
chr2.1 CDS 34248371 34248658 34248371 ID=cds.MS.gene071353.t1;Parent=MS.gene071353.t1
chr2.1 exon 34248026 34248280 34248026 ID=MS.gene071353.t1.exon6;Parent=MS.gene071353.t1
chr2.1 CDS 34248026 34248280 34248026 ID=cds.MS.gene071353.t1;Parent=MS.gene071353.t1
Gene Sequence

>MS.gene071353

ATGACATCGTTATTCTCTCAAATTGCTGTCAACAACGAACCAAGTGTTGATTTCTTTCACAAATTGAAGACGATGAGTATCCTAGAAGAGAAGTTAACAGTGAGGCCAAAAGATATTTTTTACTTATTCGGGTTAAAAGAGAATGGAATCCACCTGCTAAACATAATCGATTCTCACCAGTGGCATCACTATATCAATCTGTTAAACAATCCAAACTACTCGGAACTTGTAAAGTACTTTTAGGTTAGAGAAGAAGTGTTTGATAAAAGAGCAACATATGAAGAACTCATAAGAGCAAGGACAAGGGATCCCAGGAATGCAAATAAGTCAAGAAAGGAACTTGGGTTGAAGGAGTTTTTTGAGACAGAAATAAGGTCATCTGTCCCAGGAGCTCCGCTGGTCATCACAAAAGGCCTAATCTCAAAATTGCTTAAGGTATAGGGTTGACAATGAACCGAACCAATTCGAAAATAGTTCGAGACTCGATTCGGTAATTAATTCGTTGAACTTTGTTCATGAACCAAACGAGTCAAAACTTGAGTTAAAAATTAAGTTCGTCAGACAAATAAGTTGAACTTGAGCTAATTATATTTCAACGTGTTTGGTTCATGAGCCAGTTATATATATATAATCCATTGTTAAATCAATTACACTATTTTTAAAAGAAATGTTATTTATCGGTGTTTTTTGTTGCTACTTTATTAACAATTATAAAGTAAAAAAAGAATTAAATCCAATAGAGAAAGAGATGGCCACTTGAGTCAAAAGAAAATAAAATGATAATGTATGATGGTAATGCCCACTTGAAAATGTTGACAGCAAACTAAGGTCATTCAGGAACTAGCTACTATTAGGCTTGCAGTTCACTAGTCCCACATTGGAAGTTTACATCAGGGTATTGAGCGACTTATCTTACAAAACAACAACGCCTATTTCCTTCTTTAATACGGGAATCCGTTTATGGTGTTATTATTCAGTAGTTATTTTCTTAATTGGTTTTTAGACCAATTGAAAGGTTTATGAGTTACTTTTTGCTCATTTAAACCACAGTTTCTCCTTCTTTTTTCTCTTTCTTAATTCATTTGATTCGAGCTATCGAGCTGAACCAAGTTGTTTGCGAGCTTGACTTGAGTCAAGTTTGAGCTTATTTGCTCTAGTTATGTGAACTTTAAACGAATTGAACTTGAGTTGGAAAAAAATTCGTGTCGAACTCGAGTCGAGTTTTGAGCCGAGTAAATTCTTATCGAGTCGAGTCGAGCTCAGACAGATTCGACTCGACTCATTTCCAGCCCTATTAACGTAGATGAATCTGAATGTTATAAAGAAAACTCTCTGTATGAGTCAGAAGAAGTAATTAGAGACAAGCCTAAAAGGCTTGGATATATATATATATATATATATATATATATACACACACACACACACACACACACACACACACACACACACACATATATGAGATAGGATCCGTTGACACTAGGTGTCCACGAATTCGTCGACACCAATTCCCAACCGTCCAGATCTATTAATCATACGGTTCACAATGTTTACTTTTAAAAAGGAAACTTAGGTATTAAAATTTTCACGTGACATTTTTTCACTGTCTTTTCTCCGCGTTGTCTTGAGGTTTTGATAGAAAATATAGCAAGTCACCATTGCCGCCGAGGAGAAGGTTCTGCACCTTCGTCATCGCGTGAGTTTTCTGTAACACAATTCTTTTTCCCTCAAGATTTTATGGACAAAGCATCCTTTCCCCTAAGATCAATTGAGTACACCGTCAAAAACAAGTGGCACCGCCATATGATTGTCTTTCACGTGTCAATAGGAATTGGCACCATAATATTCTTTTATTTGTCTTTACATTTTCACTAATACCATGTTTCTCCCATAATTAAATACTTTCATTGTTCATTGAGGCAATTATATCCACGCCATATTATTATTATTATTATTTTTGCTAATGTCATGTTTCTCTCATGATCATGATCATGAATACTCATTATTCATGGCTTCTTTTATTTTTTTTTTATATCCTATAGGTACATGGATAATGAGTATGTGGAAAATTCTACTGTTGAGTGTTTAGAAGACCATGAGATAGTTGATGATGTGTCTAATGATTTAGAACCAAATTTAGAAAATTCCAAGTCACCTGAAGCTAATATTTGTCCTATTGTTGATATGGAATTTGACTCCATTGTGGATGTAAAAGAATTCTACACATCGTTTGCCAAGAAAGAAGGTTTTGGAGTTCGTGTTCGGTCTACTAAGCAAATTTTTTGCATGCTTGTATGCGCTAATGAAGGTACACATATAGTAAAGGGTGAAAATGAAGAAGGGAAGAGAAAGAGTTCAACCTCAAGAACTGATTGTAAAGCATCACTTACTGTTTCAAAAGCAGGGAAGAGAAGTAAATGGGTTATAAAAAGCATAAACAATGTTCACAATCATGGAATGGTTAGTCCTAAGAGTGTGGCCAATCTGCTTTCTCATAATTAGAAAATGACTGCAGCAACTAAGAGCCTCGTTGAGAAGTTTGATGAAGAAGGAGTACCTACAGGGAAAGTTGCTACAATGTTTCAGGGTGAAGATAATGCCTTGTCTAGTCGGGATTGCTGGAATCATCTTAGAAATCTCAGAAGAAGAAATCTTGATGTGGGAGATGCTCAAGCTGTCTTTAAATTTTGCAAGAAAAAACAAGTTGAGAATCCCAATTTTTTTTTATGCAATACAATGTGATGATGAAGATAGAATGATAAATTTCTTCTGGGTGGATGGAAGAGCAAGATTGTCGTATCAATTTTTTGGTGATGTTGTTACATTTGATACAACCTATAAAACCAACAAGTATGATATGCCATTTGCACCCTTCACCGGATTGAACCATCATTTTCAATCTATCTTGTTTGGTTGTGCTTTGTTGCAAGATGAGACTCAGAAGTCGTTTGACTGGTTGTTTACTTTTATTTTAGAGACAATGTTTATGTTGCTTAAATAATGATACAACAGCTGCCCATTCAGCCAACATTTTCGATACAGCAGCTCATTCAGCCAATATTGGTACTGAATTTTGGCGATAATACTAAATTTGATTTTGGCGATCAATGTCTTTATTATAATATGACAGCAGTTGTTATAATATGTACTGACAATGTTCCATCATATATATTCTCAATGGCAGAGCCAATAACATGACAACCAATTACCTCATAATATAACAGCAAGGATTGATATCCATGATTTTAGTCAGCAATATAGTACACTCTGCCAGCAACCACCGAGCACATACATCAACAACTTCAATTGGACTTAAATTTGAGCATCATTCATAAGAAAATAAGCAGTATTTGCTCCAGAGTTTATTTAATTTCAATCTCAATTGAGTAACATAGACATTATAAGAAAAAATAAACAGATGGTTCTTTAGAGCAAAACTTACTTAATACAAGAAACACCAAAGTTTAGAGTCTCTTTATATGGTAGACAATGTAATAAAAAAGCATATAGATTAGGAATCATCATACAACAAATCAAAACTTACTAAATTTACAAACAAGTTTCAAACCAGATAGTTTTCTAAAGAAGATCTACTTGGTACCATCTCCGATGGTTTTATTATCTACAACAATTTTAACTTTCCTATACTCAACATCTAAAAGTTGCATAGAACATCCTTCTGAAACCACTGCACAACGTTTATTGGCAAATATTGTCCACAAATAAAGCAGAGTAAATGCTGTCAATGCTCCACAACCAGTACCAAATATCATTGCAGCAAGAACTCTTAAAACACAATCATTCTTCTTTGCCCTTTCCTTTGGTTTAACAAGAATCAACATTAGTCAACTGTGTATTTACTAGTGTTTATTAGTTTTTAATATTGTAATTAATCATATTTAATATGTTACCAATTGTATACACAAGTATATGAATATAAATAAACATTCAGTATGGTCATGTAAGACACACAACCATTATACAATCTCAATTTGGTATCAGTAGTTTTAGGTTTCACGATCTGTTCTTATATGCCTCAGTAACCCTGCCATTACAAACGGCCACTGAGCAACCCTCATCTCTGCCACCGCGCATCTTCCCTCCGGTGTGCCACTACCAATAGGTTCGTCTCACTCCGACGACCTCTGCAGTCCAGCCAACACTCATGGTTGATACCGGAGGTGCCGATTCTTTTACTTTCACCAAAGTTTCGCTCATTCTGTGTGAGAAGCTAACCGGAACAACCAACTACAACATATGGGCTGGTGCCGTCAGACTCTGGTTTCACGGTCAAGGTCTTGAAGATCACTTGACCAAACAAGCCAAAGATATTGCCATTGTTCATCACACAAAATGGAAGCAAGTCGATGCATCCCTATGCACCGTTCTATGGTTTTCAATAGCACCCCATCTCCAAGCACAGTACCAAGCTTTAATTACTTGCTATGAAGTGTAGGAAAAGGCTAAGAAAGTCTTCTCTAATGATGTTCACCGTCTCTACAACGTTGTTCACATCCTCAATTCTTTGAAATTGGAGAATATGGATGTTCAAGCTTATCTTAGTAAGCTTGATTCTTTAAAGGCTAATTTTCAAACTTTAATGCCTTTCACTAGTGATGCAACAACTCATGCCGAACAACGCAGCAAGTTTTTCATGGTCATGGCTCTTGTTGGACTGCCACCAGAACTTGATTCTGTGCGCAACCAAATTTTATCTGGATCTACTGTTCCTGATTATGAGACAGTTAGTGAACAATTGTTGCGATTGGCCACACCTCATGCTTTTGGTCATGTCTCCACTCCATCTCCTAATGATTCATCTGCTCTTGCCTAGCACTACAATGGCCGTGGTGGACGGAATGGAGGACGCAGTAGTCGTAATAGTGTTCGTTGCAACTATTGCAACCGCTACGGCCATATTGAAGCTGATTGTCGTACAAAAGTAAGAGAACAACAACAACAGCCTAGAGTTGTTGTCGTTGCTCAACCTACTACCGTCGGAGATGTTACTATTCCGGCCGCTGATTACAATGAGTTCCTTCAGTTCAAAGCAGCCCATCAGCCATCATCTTCTACCGTTGTTGCGTAG
Protein sequence

>MS.gene071353.t1

MTSLFSQIAVNNEPSVDFFHKLKTMSILEEKLTVRPKDIFYLFGLKENGIHLLNIIDSHQWHHYINLLNNPNYSELVKYMDNEYVENSTVECLEDHEIVDDVSNDLEPNLENSKSPEANICPIVDMEFDSIVDVKEFYTSFAKKEGFGVRVRSTKQIFCMLVCANEGTHIVKGENEEGKRKSSTSRTDCKASLTVSKAGKRSKWVIKSINNVHNHGMKMTAATKSLVEKFDEEGVPTGKVATMFQGEDNALSSRDCWNHLRNLRRRNLDVGDAQAVRLTPTTSAVQPTLMVDTGGADSFTFTKVSLILCEKLTGTTNYNIWAGAVRLWFHGQGLEDHLTKQAKDIAIVHHTKWKQEKAKKVFSNDVHRLYNVVHILNSLKLENMDVQAYLSKLDSLKANFQTLMPFTSDATTHAEQRSKFFMVMALVGLPPELDSVRNQILSGSTVPDYETHYNGRGGRNGGRSSRNSVRCNYCNRYGHIEADCRTKVREQQQQPRVVVVAQPTTVGDVTIPAADYNEFLQFKAAHQPSSSTVVA