Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072051.t1 | XP_003592973.1 | 76.5 | 452 | 11 | 2 | 1 | 358 | 1 | 451 | 8.10E-190 | 672.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072051.t1 | Q84WU6 | 38.3 | 381 | 179 | 10 | 10 | 344 | 16 | 386 | 3.4e-64 | 246.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072051.t1 | G7INP6 | 76.5 | 452 | 11 | 2 | 1 | 358 | 1 | 451 | 5.8e-190 | 672.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene072051.t1 | TF | B3-ARF |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072051.t1 | MTR_2g006270 | 96.439 | 337 | 11 | 1 | 1 | 337 | 1 | 336 | 0.0 | 676 |
MS.gene072051.t1 | MTR_2g006380 | 72.189 | 338 | 78 | 6 | 7 | 339 | 14 | 340 | 5.28e-173 | 489 |
MS.gene072051.t1 | MTR_5g061220 | 50.413 | 363 | 140 | 9 | 7 | 337 | 13 | 367 | 8.54e-111 | 333 |
MS.gene072051.t1 | MTR_2g024430 | 51.775 | 338 | 147 | 7 | 6 | 337 | 13 | 340 | 5.21e-108 | 326 |
MS.gene072051.t1 | MTR_1g058210 | 51.917 | 339 | 151 | 6 | 6 | 337 | 5 | 338 | 3.55e-107 | 322 |
MS.gene072051.t1 | MTR_5g040880 | 48.824 | 340 | 160 | 6 | 3 | 337 | 1 | 331 | 5.73e-102 | 311 |
MS.gene072051.t1 | MTR_5g040740 | 43.099 | 413 | 167 | 10 | 5 | 359 | 4 | 406 | 1.78e-94 | 288 |
MS.gene072051.t1 | MTR_5g082140 | 47.230 | 343 | 161 | 8 | 5 | 337 | 4 | 336 | 1.07e-92 | 285 |
MS.gene072051.t1 | MTR_5g060780 | 45.170 | 352 | 162 | 13 | 7 | 344 | 6 | 340 | 1.65e-89 | 275 |
MS.gene072051.t1 | MTR_5g061890 | 45.217 | 345 | 160 | 12 | 7 | 337 | 6 | 335 | 6.82e-89 | 273 |
MS.gene072051.t1 | MTR_5g460920 | 45.170 | 352 | 162 | 13 | 7 | 344 | 6 | 340 | 3.45e-88 | 271 |
MS.gene072051.t1 | MTR_3g073420 | 40.741 | 378 | 171 | 10 | 5 | 337 | 11 | 380 | 2.05e-84 | 267 |
MS.gene072051.t1 | MTR_5g060630 | 43.467 | 375 | 160 | 13 | 6 | 337 | 5 | 370 | 9.62e-81 | 256 |
MS.gene072051.t1 | MTR_5g460740 | 43.467 | 375 | 160 | 13 | 6 | 337 | 5 | 370 | 9.62e-81 | 256 |
MS.gene072051.t1 | MTR_2g094570 | 39.433 | 388 | 172 | 11 | 12 | 348 | 10 | 385 | 2.61e-79 | 256 |
MS.gene072051.t1 | MTR_2g094570 | 39.433 | 388 | 172 | 11 | 12 | 348 | 10 | 385 | 2.79e-79 | 256 |
MS.gene072051.t1 | MTR_2g094570 | 39.433 | 388 | 172 | 11 | 12 | 348 | 66 | 441 | 1.08e-78 | 256 |
MS.gene072051.t1 | MTR_4g058930 | 36.410 | 390 | 182 | 9 | 4 | 337 | 3 | 382 | 5.39e-74 | 242 |
MS.gene072051.t1 | MTR_4g058930 | 36.410 | 390 | 182 | 9 | 4 | 337 | 3 | 382 | 8.13e-74 | 242 |
MS.gene072051.t1 | MTR_1g094960 | 38.021 | 384 | 180 | 12 | 13 | 348 | 19 | 392 | 4.11e-72 | 236 |
MS.gene072051.t1 | MTR_1g064430 | 35.417 | 384 | 180 | 10 | 12 | 337 | 26 | 399 | 8.17e-72 | 236 |
MS.gene072051.t1 | MTR_1g064430 | 35.417 | 384 | 180 | 10 | 12 | 337 | 39 | 412 | 1.10e-71 | 236 |
MS.gene072051.t1 | MTR_7g101280 | 35.385 | 390 | 179 | 13 | 10 | 337 | 28 | 406 | 1.23e-64 | 217 |
MS.gene072051.t1 | MTR_0041s0110 | 35.385 | 390 | 179 | 13 | 10 | 337 | 28 | 406 | 1.23e-64 | 217 |
MS.gene072051.t1 | MTR_7g101275 | 38.801 | 317 | 163 | 12 | 23 | 321 | 2 | 305 | 3.20e-58 | 194 |
MS.gene072051.t1 | MTR_5g062970 | 49.268 | 205 | 93 | 4 | 13 | 214 | 38 | 234 | 8.94e-57 | 185 |
MS.gene072051.t1 | MTR_0041s0120 | 35.168 | 327 | 173 | 11 | 23 | 321 | 2 | 317 | 1.02e-51 | 177 |
MS.gene072051.t1 | MTR_4g124900 | 33.429 | 350 | 211 | 9 | 10 | 344 | 20 | 362 | 7.75e-50 | 179 |
MS.gene072051.t1 | MTR_8g100050 | 33.333 | 339 | 214 | 5 | 13 | 341 | 59 | 395 | 9.18e-50 | 177 |
MS.gene072051.t1 | MTR_2g014770 | 30.641 | 359 | 213 | 9 | 13 | 348 | 53 | 398 | 2.31e-49 | 175 |
MS.gene072051.t1 | MTR_8g100050 | 34.018 | 341 | 209 | 7 | 13 | 341 | 59 | 395 | 2.51e-49 | 177 |
MS.gene072051.t1 | MTR_2g014770 | 30.641 | 359 | 213 | 9 | 13 | 348 | 53 | 398 | 4.11e-49 | 175 |
MS.gene072051.t1 | MTR_4g124900 | 33.429 | 350 | 211 | 9 | 10 | 344 | 20 | 362 | 4.89e-48 | 174 |
MS.gene072051.t1 | MTR_2g043250 | 32.571 | 350 | 214 | 7 | 10 | 344 | 20 | 362 | 1.91e-47 | 172 |
MS.gene072051.t1 | MTR_8g079492 | 33.724 | 341 | 205 | 8 | 13 | 338 | 23 | 357 | 3.67e-47 | 171 |
MS.gene072051.t1 | MTR_8g079492 | 33.724 | 341 | 205 | 8 | 13 | 338 | 23 | 357 | 4.46e-47 | 171 |
MS.gene072051.t1 | MTR_3g064050 | 32.840 | 338 | 213 | 6 | 13 | 338 | 26 | 361 | 7.02e-47 | 171 |
MS.gene072051.t1 | MTR_2g005240 | 33.815 | 346 | 204 | 9 | 13 | 342 | 23 | 359 | 8.15e-47 | 169 |
MS.gene072051.t1 | MTR_5g076270 | 32.551 | 341 | 210 | 7 | 13 | 338 | 24 | 359 | 1.65e-46 | 169 |
MS.gene072051.t1 | MTR_2g018690 | 32.845 | 341 | 209 | 7 | 13 | 338 | 23 | 358 | 2.77e-46 | 169 |
MS.gene072051.t1 | MTR_1g024025 | 33.623 | 345 | 210 | 9 | 13 | 343 | 43 | 382 | 2.20e-45 | 167 |
MS.gene072051.t1 | MTR_4g088210 | 32.153 | 367 | 199 | 11 | 8 | 342 | 33 | 381 | 2.78e-45 | 165 |
MS.gene072051.t1 | MTR_4g088210 | 32.153 | 367 | 199 | 11 | 8 | 342 | 33 | 381 | 4.62e-45 | 164 |
MS.gene072051.t1 | MTR_8g101360 | 32.951 | 349 | 214 | 10 | 5 | 338 | 23 | 366 | 3.64e-44 | 163 |
MS.gene072051.t1 | MTR_4g021580 | 30.946 | 349 | 223 | 8 | 13 | 349 | 19 | 361 | 5.98e-44 | 160 |
MS.gene072051.t1 | MTR_4g021580 | 30.946 | 349 | 223 | 8 | 13 | 349 | 19 | 361 | 1.05e-43 | 160 |
MS.gene072051.t1 | MTR_2g093740 | 31.624 | 351 | 214 | 7 | 13 | 341 | 56 | 402 | 9.18e-43 | 158 |
MS.gene072051.t1 | MTR_2g093740 | 31.624 | 351 | 214 | 7 | 13 | 341 | 56 | 402 | 9.99e-43 | 158 |
MS.gene072051.t1 | MTR_2g093740 | 31.624 | 351 | 214 | 7 | 13 | 341 | 56 | 402 | 1.24e-42 | 158 |
MS.gene072051.t1 | MTR_8g027440 | 30.904 | 343 | 216 | 9 | 13 | 342 | 29 | 363 | 1.43e-41 | 154 |
MS.gene072051.t1 | MTR_7g062540 | 30.000 | 350 | 219 | 9 | 13 | 346 | 14 | 353 | 6.20e-40 | 150 |
MS.gene072051.t1 | MTR_2g093740 | 30.495 | 364 | 214 | 8 | 13 | 341 | 56 | 415 | 1.39e-39 | 149 |
MS.gene072051.t1 | MTR_2g093740 | 30.495 | 364 | 214 | 8 | 13 | 341 | 56 | 415 | 1.59e-39 | 149 |
MS.gene072051.t1 | MTR_2g093740 | 30.495 | 364 | 214 | 8 | 13 | 341 | 56 | 415 | 2.17e-39 | 149 |
MS.gene072051.t1 | MTR_4g060460 | 30.460 | 348 | 216 | 9 | 13 | 338 | 54 | 397 | 4.31e-38 | 145 |
MS.gene072051.t1 | MTR_4g060460 | 30.460 | 348 | 216 | 9 | 13 | 338 | 54 | 397 | 5.13e-38 | 145 |
MS.gene072051.t1 | MTR_8g079492 | 33.453 | 278 | 165 | 7 | 76 | 338 | 3 | 275 | 2.40e-35 | 137 |
MS.gene072051.t1 | MTR_5g046120 | 58.333 | 120 | 40 | 6 | 51 | 165 | 9 | 123 | 6.73e-33 | 119 |
MS.gene072051.t1 | MTR_5g060770 | 35.461 | 282 | 119 | 12 | 66 | 337 | 8 | 236 | 1.88e-32 | 124 |
MS.gene072051.t1 | MTR_8g446900 | 29.225 | 284 | 181 | 8 | 67 | 338 | 14 | 289 | 4.36e-28 | 113 |
MS.gene072051.t1 | MTR_2g093740 | 32.489 | 237 | 146 | 5 | 117 | 341 | 38 | 272 | 6.69e-28 | 115 |
MS.gene072051.t1 | MTR_2g093740 | 32.489 | 237 | 146 | 5 | 117 | 341 | 38 | 272 | 8.55e-28 | 115 |
MS.gene072051.t1 | MTR_2g093740 | 30.800 | 250 | 146 | 6 | 117 | 341 | 38 | 285 | 9.81e-25 | 105 |
MS.gene072051.t1 | MTR_2g093740 | 30.800 | 250 | 146 | 6 | 117 | 341 | 38 | 285 | 1.17e-24 | 105 |
MS.gene072051.t1 | MTR_5g062960 | 44.444 | 126 | 55 | 6 | 239 | 354 | 1 | 121 | 6.43e-22 | 92.4 |
MS.gene072051.t1 | MTR_5g460910 | 30.272 | 294 | 117 | 14 | 56 | 337 | 14 | 231 | 2.33e-19 | 88.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene072051.t1 | AT1G77850 | 37.037 | 405 | 184 | 11 | 10 | 353 | 16 | 410 | 5.43e-82 | 261 |
MS.gene072051.t1 | AT1G77850 | 37.037 | 405 | 184 | 11 | 10 | 353 | 16 | 410 | 6.64e-82 | 261 |
MS.gene072051.t1 | AT4G30080 | 37.240 | 384 | 178 | 11 | 12 | 344 | 18 | 389 | 1.85e-72 | 238 |
MS.gene072051.t1 | AT2G28350 | 35.821 | 402 | 188 | 12 | 5 | 348 | 2 | 391 | 3.33e-70 | 232 |
MS.gene072051.t1 | AT2G28350 | 35.821 | 402 | 188 | 12 | 5 | 348 | 2 | 391 | 3.95e-70 | 232 |
MS.gene072051.t1 | AT4G23980 | 33.824 | 340 | 211 | 6 | 13 | 342 | 12 | 347 | 5.95e-52 | 182 |
MS.gene072051.t1 | AT4G23980 | 33.824 | 340 | 211 | 6 | 13 | 342 | 12 | 347 | 6.03e-52 | 182 |
MS.gene072051.t1 | AT5G37020 | 32.840 | 338 | 213 | 6 | 13 | 338 | 22 | 357 | 1.22e-48 | 175 |
MS.gene072051.t1 | AT5G37020 | 32.840 | 338 | 213 | 6 | 13 | 338 | 22 | 357 | 1.49e-48 | 175 |
MS.gene072051.t1 | AT2G33860 | 32.194 | 351 | 204 | 9 | 13 | 341 | 54 | 392 | 2.62e-48 | 172 |
MS.gene072051.t1 | AT5G20730 | 32.493 | 357 | 220 | 8 | 3 | 344 | 14 | 364 | 4.25e-48 | 174 |
MS.gene072051.t1 | AT5G20730 | 32.493 | 357 | 220 | 8 | 3 | 344 | 14 | 364 | 5.07e-48 | 174 |
MS.gene072051.t1 | AT5G20730 | 32.493 | 357 | 219 | 9 | 3 | 344 | 14 | 363 | 2.14e-47 | 172 |
MS.gene072051.t1 | AT2G46530 | 32.448 | 339 | 208 | 8 | 13 | 338 | 21 | 351 | 5.51e-47 | 168 |
MS.gene072051.t1 | AT2G46530 | 32.448 | 339 | 208 | 8 | 13 | 338 | 42 | 372 | 8.20e-47 | 168 |
MS.gene072051.t1 | AT1G30330 | 33.431 | 341 | 207 | 8 | 13 | 338 | 25 | 360 | 4.20e-46 | 169 |
MS.gene072051.t1 | AT1G30330 | 33.431 | 341 | 207 | 8 | 13 | 338 | 25 | 360 | 4.20e-46 | 169 |
MS.gene072051.t1 | AT1G30330 | 33.431 | 341 | 207 | 8 | 13 | 338 | 23 | 358 | 4.88e-46 | 168 |
MS.gene072051.t1 | AT3G61830 | 31.503 | 346 | 210 | 8 | 13 | 342 | 25 | 359 | 5.26e-46 | 166 |
MS.gene072051.t1 | AT5G60450 | 32.033 | 359 | 220 | 7 | 8 | 346 | 36 | 390 | 6.37e-46 | 167 |
MS.gene072051.t1 | AT5G62000 | 34.111 | 343 | 206 | 9 | 13 | 341 | 61 | 397 | 9.97e-46 | 167 |
MS.gene072051.t1 | AT5G62000 | 34.111 | 343 | 206 | 9 | 13 | 341 | 61 | 397 | 9.97e-46 | 167 |
MS.gene072051.t1 | AT5G62000 | 34.111 | 343 | 206 | 9 | 13 | 341 | 61 | 397 | 9.97e-46 | 167 |
MS.gene072051.t1 | AT5G62000 | 34.111 | 343 | 206 | 9 | 13 | 341 | 61 | 397 | 9.97e-46 | 167 |
MS.gene072051.t1 | AT5G62000 | 34.111 | 343 | 206 | 9 | 13 | 341 | 61 | 397 | 1.06e-45 | 167 |
MS.gene072051.t1 | AT1G34310 | 33.237 | 346 | 200 | 9 | 8 | 337 | 22 | 352 | 1.07e-45 | 165 |
MS.gene072051.t1 | AT5G60450 | 32.213 | 357 | 212 | 8 | 13 | 346 | 65 | 414 | 1.35e-45 | 166 |
MS.gene072051.t1 | AT1G19220 | 30.618 | 356 | 223 | 9 | 4 | 344 | 16 | 362 | 4.17e-45 | 166 |
MS.gene072051.t1 | AT1G19850 | 34.286 | 350 | 208 | 10 | 10 | 343 | 40 | 383 | 7.05e-45 | 165 |
MS.gene072051.t1 | AT1G19850 | 34.375 | 352 | 205 | 11 | 10 | 343 | 51 | 394 | 8.50e-45 | 165 |
MS.gene072051.t1 | AT1G35520 | 32.174 | 345 | 215 | 8 | 3 | 337 | 17 | 352 | 1.62e-44 | 162 |
MS.gene072051.t1 | AT1G34390 | 32.659 | 346 | 200 | 10 | 8 | 337 | 22 | 350 | 1.63e-44 | 162 |
MS.gene072051.t1 | AT1G35540 | 32.286 | 350 | 213 | 11 | 8 | 345 | 22 | 359 | 2.66e-43 | 158 |
MS.gene072051.t1 | AT1G35240 | 32.353 | 340 | 211 | 8 | 8 | 337 | 22 | 352 | 8.21e-43 | 157 |
MS.gene072051.t1 | AT1G34410 | 31.765 | 340 | 213 | 8 | 8 | 337 | 22 | 352 | 3.06e-42 | 155 |
MS.gene072051.t1 | AT1G59750 | 32.070 | 343 | 214 | 9 | 13 | 342 | 22 | 358 | 5.25e-42 | 155 |
MS.gene072051.t1 | AT1G59750 | 32.070 | 343 | 214 | 9 | 13 | 342 | 22 | 358 | 5.25e-42 | 155 |
MS.gene072051.t1 | AT1G59750 | 32.070 | 343 | 214 | 9 | 13 | 342 | 22 | 358 | 5.34e-42 | 155 |
MS.gene072051.t1 | AT1G59750 | 32.070 | 343 | 214 | 9 | 13 | 342 | 22 | 358 | 6.10e-42 | 155 |
MS.gene072051.t1 | AT1G34170 | 30.372 | 349 | 222 | 9 | 1 | 337 | 13 | 352 | 1.64e-40 | 149 |
MS.gene072051.t1 | AT1G34170 | 29.942 | 344 | 204 | 8 | 1 | 337 | 13 | 326 | 5.65e-38 | 142 |
MS.gene072051.t1 | AT1G34170 | 29.942 | 344 | 204 | 8 | 1 | 337 | 13 | 326 | 1.18e-37 | 142 |
MS.gene072051.t1 | AT3G61830 | 31.164 | 292 | 174 | 8 | 67 | 342 | 28 | 308 | 9.37e-33 | 128 |
MS.gene072051.t1 | AT2G33860 | 32.773 | 238 | 143 | 6 | 117 | 341 | 2 | 235 | 1.35e-31 | 124 |
MS.gene072051.t1 | AT5G37020 | 34.188 | 234 | 140 | 6 | 117 | 338 | 31 | 262 | 2.94e-31 | 125 |
MS.gene072051.t1 | AT1G43950 | 34.259 | 216 | 121 | 5 | 8 | 217 | 22 | 222 | 1.88e-30 | 116 |
MS.gene072051.t1 | AT2G46530 | 33.191 | 235 | 143 | 6 | 114 | 338 | 34 | 264 | 1.23e-29 | 119 |
Find 92 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATCTCGTACTTCTAATTTA+TGG | 0.108193 | 2.4:+76097868 | MS.gene072051:CDS |
TTTGAATATCGTAGGTTAAT+TGG | 0.128409 | 2.4:+76099588 | MS.gene072051:intron |
GCACATGTGTGCCAAATTTC+TGG | 0.215696 | 2.4:-76096988 | None:intergenic |
CGCATGTGCGTCCAGAAATT+TGG | 0.217939 | 2.4:+76096977 | MS.gene072051:CDS |
TTCATCTTAACTCTCATTCT+AGG | 0.234993 | 2.4:-76097798 | None:intergenic |
GATTGGCAACCTCTTCTTTA+GGG | 0.275578 | 2.4:-76097254 | None:intergenic |
AGATTGGCAACCTCTTCTTT+AGG | 0.275924 | 2.4:-76097255 | None:intergenic |
AGCCATCATCTCCCTTGATA+TGG | 0.278817 | 2.4:-76100009 | None:intergenic |
TAATTTATGGCGCATGCTTC+AGG | 0.288610 | 2.4:+76097881 | MS.gene072051:CDS |
ATAGAGATTGTCCCTTGATA+TGG | 0.294890 | 2.4:-76097843 | None:intergenic |
AGATGGACATCGTTGGTTAT+TGG | 0.309930 | 2.4:-76097225 | None:intergenic |
TTGAATATCGTAGGTTAATT+GGG | 0.314702 | 2.4:+76099589 | MS.gene072051:intron |
CTGTTCGTTACCGACGTTCA+TGG | 0.320691 | 2.4:+76097423 | MS.gene072051:CDS |
TTCATCGCGGTTGTTGAGAT+TGG | 0.361556 | 2.4:-76097271 | None:intergenic |
TAAACTCTTGAATGCAACTT+TGG | 0.370692 | 2.4:-76097030 | None:intergenic |
GATATATAACATGTTTCTCT+TGG | 0.384809 | 2.4:-76097484 | None:intergenic |
AATGGAATTCGTTTGTTAAG+AGG | 0.398429 | 2.4:+76097511 | MS.gene072051:CDS |
TCAACGGGAAAGTTATTTGT+TGG | 0.427846 | 2.4:+76097576 | MS.gene072051:CDS |
CAACGGGAAAGTTATTTGTT+GGG | 0.431447 | 2.4:+76097577 | MS.gene072051:CDS |
GCAGTTTGTTGCAGCGGCGG+CGG | 0.440577 | 2.4:+76097614 | MS.gene072051:CDS |
TGAGTTGGAGAAGGCAGTAA+TGG | 0.441158 | 2.4:+76097650 | MS.gene072051:CDS |
TCATCTTAACTCTCATTCTA+GGG | 0.445548 | 2.4:-76097797 | None:intergenic |
ATGAATCAATGAAGATTCAA+TGG | 0.450458 | 2.4:+76097772 | MS.gene072051:CDS |
TGAGTCTTTCATGAAAATAA+CGG | 0.452973 | 2.4:-76097556 | None:intergenic |
TGAAGACTGATAAATCTTCA+AGG | 0.454632 | 2.4:+76097817 | MS.gene072051:CDS |
CAGGTGTTGAGACGAGGATT+CGG | 0.457588 | 2.4:-76097403 | None:intergenic |
TTGGGATGAATTTCAAGTCT+CGG | 0.458166 | 2.4:+76099607 | MS.gene072051:CDS |
ACTATCCTCGAGGGGATGAT+TGG | 0.466368 | 2.4:+76097718 | MS.gene072051:CDS |
AGTCAACCCGTGGTGGGTTG+AGG | 0.468552 | 2.4:+76099643 | MS.gene072051:CDS |
CACGCAGTTTGTTGCAGCGG+CGG | 0.472211 | 2.4:+76097611 | MS.gene072051:CDS |
TCCCATATCAAGGGAGATGA+TGG | 0.474390 | 2.4:+76100007 | MS.gene072051:CDS |
CATGAACGTCGGTAACGAAC+AGG | 0.475779 | 2.4:-76097422 | None:intergenic |
GCCATCATCTCCCTTGATAT+GGG | 0.476908 | 2.4:-76100008 | None:intergenic |
ATATATAACATGTTTCTCTT+GGG | 0.481990 | 2.4:-76097483 | None:intergenic |
TAGAGATTGTCCCTTGATAT+GGG | 0.482488 | 2.4:-76097842 | None:intergenic |
AAAAGAGTGTGTGTGGGTAA+TGG | 0.489755 | 2.4:-76097103 | None:intergenic |
CACCACGGGTTGACTCGTCT+TGG | 0.505317 | 2.4:-76099635 | None:intergenic |
TGCCGATCCTCACACGGATG+AGG | 0.509768 | 2.4:+76097179 | MS.gene072051:CDS |
TCTTCAAGGATCCCATATCA+AGG | 0.512818 | 2.4:+76097831 | MS.gene072051:CDS |
AGTTATTTGTTGGGATTCGC+AGG | 0.513561 | 2.4:+76097586 | MS.gene072051:CDS |
AAGCCGCGGGAAGACATTAT+CGG | 0.516617 | 2.4:-76097370 | None:intergenic |
AGTAATGGAGGCATTGAAGT+TGG | 0.517015 | 2.4:+76097665 | MS.gene072051:CDS |
GACCTCATCCGTGTGAGGAT+CGG | 0.528604 | 2.4:-76097181 | None:intergenic |
ACATGTTATATATCTCTGAA+TGG | 0.530162 | 2.4:+76097493 | MS.gene072051:CDS |
AGCGGCGGCGGAGCAGAAGA+AGG | 0.532222 | 2.4:+76097626 | MS.gene072051:CDS |
AAGAGGAAGAAACTCGTGGC+TGG | 0.538632 | 2.4:+76097528 | MS.gene072051:CDS |
GGAGCAGAAGAAGGATGAGT+TGG | 0.543711 | 2.4:+76097635 | MS.gene072051:CDS |
TTTCACAATTCCCATATCAA+GGG | 0.556840 | 2.4:+76099998 | MS.gene072051:CDS |
TGGGAAACCCGCGGCAGACA+TGG | 0.563883 | 2.4:-76097464 | None:intergenic |
AAATTGTTTACTATCCTCGA+GGG | 0.568194 | 2.4:+76097709 | MS.gene072051:CDS |
CGGCACAAAAGCGAGGTATG+TGG | 0.571206 | 2.4:-76097350 | None:intergenic |
GAAGAAGGATGAGTTGGAGA+AGG | 0.573545 | 2.4:+76097641 | MS.gene072051:CDS |
AGAGTGTGTGTGGGTAATGG+AGG | 0.575190 | 2.4:-76097100 | None:intergenic |
GAGACGAGGATTCGGCCTCT+AGG | 0.578409 | 2.4:-76097395 | None:intergenic |
ATTTCTGGACGCACATGCGA+TGG | 0.580120 | 2.4:-76096973 | None:intergenic |
TCTTGAAAACCCTAAAGAAG+AGG | 0.581476 | 2.4:+76097245 | MS.gene072051:CDS |
TCTCCTTGCCGATCCTCACA+CGG | 0.588085 | 2.4:+76097173 | MS.gene072051:CDS |
CTTCCCGCGGCTTGACCTAG+AGG | 0.588102 | 2.4:+76097380 | MS.gene072051:CDS |
AATGGAGGCATTGAAGTTGG+CGG | 0.590740 | 2.4:+76097668 | MS.gene072051:CDS |
GAAGTTGGCGGAAGAGAACA+AGG | 0.600106 | 2.4:+76097680 | MS.gene072051:CDS |
GTTCTGATGTTAACAATGCT+CGG | 0.602948 | 2.4:+76097322 | MS.gene072051:CDS |
AAATAACCTCAACCCACCAC+GGG | 0.608942 | 2.4:-76099649 | None:intergenic |
CTTCAAGGATCCCATATCAA+GGG | 0.609531 | 2.4:+76097832 | MS.gene072051:CDS |
GAGACGATACAAGGAGTGAA+AGG | 0.609567 | 2.4:-76097141 | None:intergenic |
TTTGTAGAAAAGAGTGTGTG+TGG | 0.609647 | 2.4:-76097110 | None:intergenic |
GAACACGCAGTTTGTTGCAG+CGG | 0.616426 | 2.4:+76097608 | MS.gene072051:CDS |
CGGCCTCTAGGTCAAGCCGC+GGG | 0.620797 | 2.4:-76097383 | None:intergenic |
TTGTGAAAATTGCTTACATG+AGG | 0.622319 | 2.4:-76099983 | None:intergenic |
TCAACAGCTGAGACGATACA+AGG | 0.622390 | 2.4:-76097150 | None:intergenic |
GAAATTGTTTACTATCCTCG+AGG | 0.624214 | 2.4:+76097708 | MS.gene072051:CDS |
GTTGGAGAAGGCAGTAATGG+AGG | 0.624776 | 2.4:+76097653 | MS.gene072051:CDS |
GTAATGGAGGAAGAAGAAGA+AGG | 0.639327 | 2.4:-76097087 | None:intergenic |
AGAGTTTATTATTTCCCACA+AGG | 0.642714 | 2.4:+76097045 | MS.gene072051:CDS |
AACGAACAGGTGTTGAGACG+AGG | 0.644655 | 2.4:-76097409 | None:intergenic |
CAAGACGAGTCAACCCGTGG+TGG | 0.644679 | 2.4:+76099636 | MS.gene072051:CDS |
AAGACGAGTCAACCCGTGGT+GGG | 0.646955 | 2.4:+76099637 | MS.gene072051:CDS |
TCGGCCTCTAGGTCAAGCCG+CGG | 0.648171 | 2.4:-76097384 | None:intergenic |
GAAATAACCTCAACCCACCA+CGG | 0.649182 | 2.4:-76099650 | None:intergenic |
TGGTTGCTTCTGAACAGACA+TGG | 0.659994 | 2.4:-76096953 | None:intergenic |
TGTTTCTCTTGGGAAACCCG+CGG | 0.663878 | 2.4:-76097473 | None:intergenic |
ACAAAGACCTCATCCGTGTG+AGG | 0.664295 | 2.4:-76097186 | None:intergenic |
TTCCAAGACGAGTCAACCCG+TGG | 0.669719 | 2.4:+76099633 | MS.gene072051:CDS |
ACATTATCGGCACAAAAGCG+AGG | 0.676914 | 2.4:-76097357 | None:intergenic |
TTGTAGAAAAGAGTGTGTGT+GGG | 0.681947 | 2.4:-76097109 | None:intergenic |
TGTTAAGAGGAAGAAACTCG+TGG | 0.682365 | 2.4:+76097524 | MS.gene072051:CDS |
GTGCCGATAATGTCTTCCCG+CGG | 0.682542 | 2.4:+76097367 | MS.gene072051:CDS |
GATGATGGCTATAAGAGCTG+CGG | 0.682568 | 2.4:+76100022 | MS.gene072051:CDS |
TGAAACTTCACCATGAACGT+CGG | 0.683050 | 2.4:-76097433 | None:intergenic |
AATTGTTTACTATCCTCGAG+GGG | 0.689459 | 2.4:+76097710 | MS.gene072051:CDS |
CATCCGTGTGAGGATCGGCA+AGG | 0.710355 | 2.4:-76097176 | None:intergenic |
TCACACCAATCATCCCCTCG+AGG | 0.748749 | 2.4:-76097723 | None:intergenic |
CAAAAGAAACAACTTCATCG+CGG | 0.749390 | 2.4:-76097284 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GATTTTCTTAAATTTATTAT+CGG | - | chr2.4:76098028-76098047 | None:intergenic | 10.0% |
!! | ACGATATTCAAATAAAAAAA+TGG | - | chr2.4:76099580-76099599 | None:intergenic | 15.0% |
!! | CGTATATTTGAATATTTAAT+TGG | + | chr2.4:76098764-76098783 | MS.gene072051:intron | 15.0% |
!! | GTAAAAAAAAATAGATGTTA+AGG | - | chr2.4:76098854-76098873 | None:intergenic | 15.0% |
!! | TACACTAACATAAATTAAAA+TGG | - | chr2.4:76098674-76098693 | None:intergenic | 15.0% |
!! | TAGTTACTAACATTAAAAAA+AGG | - | chr2.4:76098811-76098830 | None:intergenic | 15.0% |
!!! | AGTTCTAAATTTTTTTGTTT+GGG | - | chr2.4:76099702-76099721 | None:intergenic | 15.0% |
!!! | ATAATTTCTTTTTCTTTTCT+TGG | + | chr2.4:76097905-76097924 | MS.gene072051:intron | 15.0% |
!!! | TAGTTCTAAATTTTTTTGTT+TGG | - | chr2.4:76099703-76099722 | None:intergenic | 15.0% |
!!! | TATTTTTTTTGGTATAAATC+AGG | + | chr2.4:76098213-76098232 | MS.gene072051:intron | 15.0% |
!!! | TTTTTTTATTTGAATATCGT+AGG | + | chr2.4:76099580-76099599 | MS.gene072051:intron | 15.0% |
!!! | TTTTTTTGTGGTATTTTTTT+TGG | + | chr2.4:76098202-76098221 | MS.gene072051:intron | 15.0% |
!! | ATAGTTAAATGACTCATTAA+AGG | + | chr2.4:76099374-76099393 | MS.gene072051:intron | 20.0% |
!! | ATATATAACATGTTTCTCTT+GGG | - | chr2.4:76097486-76097505 | None:intergenic | 20.0% |
!! | TCTAATTATAGATATAGCAT+TGG | - | chr2.4:76098287-76098306 | None:intergenic | 20.0% |
!! | TTTAACTATAGATGAAACTT+TGG | - | chr2.4:76099363-76099382 | None:intergenic | 20.0% |
!!! | GTTCTAAATTTTTTTGTTTG+GGG | - | chr2.4:76099701-76099720 | None:intergenic | 20.0% |
!!! | GTTGATAAATGATTTTTTTG+TGG | + | chr2.4:76098190-76098209 | MS.gene072051:intron | 20.0% |
!!! | TAGACTTTATTTGAACAATA+TGG | + | chr2.4:76099472-76099491 | MS.gene072051:intron | 20.0% |
!!! | TTCTAAATTTTTTTGTTTGG+GGG | - | chr2.4:76099700-76099719 | None:intergenic | 20.0% |
! | AAATGAAATGCAATATCGAT+TGG | - | chr2.4:76098708-76098727 | None:intergenic | 25.0% |
! | AACACCAAAAATTATAGTGA+TGG | + | chr2.4:76099929-76099948 | MS.gene072051:intron | 25.0% |
! | AATTCCTTCATAAAACCATA+CGG | + | chr2.4:76099006-76099025 | MS.gene072051:intron | 25.0% |
! | ACATGTTATATATCTCTGAA+TGG | + | chr2.4:76097493-76097512 | MS.gene072051:CDS | 25.0% |
! | ATGAATCAATGAAGATTCAA+TGG | + | chr2.4:76097772-76097791 | MS.gene072051:CDS | 25.0% |
! | GATATATAACATGTTTCTCT+TGG | - | chr2.4:76097487-76097506 | None:intergenic | 25.0% |
! | GATGGTTCAATTATGTTATT+TGG | + | chr2.4:76099947-76099966 | MS.gene072051:intron | 25.0% |
! | TATCTCGTACTTCTAATTTA+TGG | + | chr2.4:76097868-76097887 | MS.gene072051:CDS | 25.0% |
! | TGAGTCTTTCATGAAAATAA+CGG | - | chr2.4:76097559-76097578 | None:intergenic | 25.0% |
! | TTGAATATCGTAGGTTAATT+GGG | + | chr2.4:76099589-76099608 | MS.gene072051:intron | 25.0% |
! | TTTGAATATCGTAGGTTAAT+TGG | + | chr2.4:76099588-76099607 | MS.gene072051:intron | 25.0% |
!! | GTCATATGAGATAGATTTTA+AGG | + | chr2.4:76099407-76099426 | MS.gene072051:intron | 25.0% |
!! | TATTTTCATGAAAGACTCAA+CGG | + | chr2.4:76097560-76097579 | MS.gene072051:CDS | 25.0% |
!! | TCGGTTAATTTACCAATTTT+GGG | + | chr2.4:76099246-76099265 | MS.gene072051:intron | 25.0% |
!! | TGAACCATCACTATAATTTT+TGG | - | chr2.4:76099936-76099955 | None:intergenic | 25.0% |
!! | TTCCTTTTTATCACTTAGTT+GGG | - | chr2.4:76099738-76099757 | None:intergenic | 25.0% |
!! | TTTCCTTTTTATCACTTAGT+TGG | - | chr2.4:76099739-76099758 | None:intergenic | 25.0% |
!!! | ATGAGATAGATTTTAAGGTT+AGG | + | chr2.4:76099412-76099431 | MS.gene072051:intron | 25.0% |
!!! | TGAGATAGATTTTAAGGTTA+GGG | + | chr2.4:76099413-76099432 | MS.gene072051:intron | 25.0% |
!!! | TGGTTTTATGAAGGAATTAT+AGG | - | chr2.4:76099004-76099023 | None:intergenic | 25.0% |
AAATTGTTTACTATCCTCGA+GGG | + | chr2.4:76097709-76097728 | MS.gene072051:CDS | 30.0% | |
AACATTAAAAAAAGGAGCGA+CGG | - | chr2.4:76098803-76098822 | None:intergenic | 30.0% | |
ACATTGAGACTTATCCTATA+GGG | - | chr2.4:76099193-76099212 | None:intergenic | 30.0% | |
AGACAAATACAAAACAAACG+AGG | - | chr2.4:76098966-76098985 | None:intergenic | 30.0% | |
AGAGTTTATTATTTCCCACA+AGG | + | chr2.4:76097045-76097064 | MS.gene072051:CDS | 30.0% | |
ATACTAGATACTATGAAGCA+CGG | - | chr2.4:76098161-76098180 | None:intergenic | 30.0% | |
CAGAGGAGTTCAAAATAATA+TGG | - | chr2.4:76099880-76099899 | None:intergenic | 30.0% | |
GGTGATACTTTATCATGTAT+AGG | - | chr2.4:76099851-76099870 | None:intergenic | 30.0% | |
GTGTTTCATAGCTAGATAAT+TGG | - | chr2.4:76097953-76097972 | None:intergenic | 30.0% | |
GTTTGACATCAATGCTTATT+GGG | + | chr2.4:76099088-76099107 | MS.gene072051:intron | 30.0% | |
TAAACTCTTGAATGCAACTT+TGG | - | chr2.4:76097033-76097052 | None:intergenic | 30.0% | |
TAAATAGCAACTCCCAAAAT+TGG | - | chr2.4:76099261-76099280 | None:intergenic | 30.0% | |
TACATTGAGACTTATCCTAT+AGG | - | chr2.4:76099194-76099213 | None:intergenic | 30.0% | |
TATTAAACGTCTCCTAATGT+CGG | - | chr2.4:76098130-76098149 | None:intergenic | 30.0% | |
TCATCTTAACTCTCATTCTA+GGG | - | chr2.4:76097800-76097819 | None:intergenic | 30.0% | |
TGAAGACTGATAAATCTTCA+AGG | + | chr2.4:76097817-76097836 | MS.gene072051:CDS | 30.0% | |
TTCAAAATAATATGGCTGTG+AGG | - | chr2.4:76099872-76099891 | None:intergenic | 30.0% | |
TTCATCTTAACTCTCATTCT+AGG | - | chr2.4:76097801-76097820 | None:intergenic | 30.0% | |
TTGTGAAAATTGCTTACATG+AGG | - | chr2.4:76099986-76100005 | None:intergenic | 30.0% | |
TTTCACAATTCCCATATCAA+GGG | + | chr2.4:76099998-76100017 | MS.gene072051:CDS | 30.0% | |
TTTGAATGAGATCACTTCAA+CGG | + | chr2.4:76099787-76099806 | MS.gene072051:intron | 30.0% | |
! | AAAACCATACGGTGTTAAAT+TGG | + | chr2.4:76099017-76099036 | MS.gene072051:intron | 30.0% |
! | AATGGAATTCGTTTGTTAAG+AGG | + | chr2.4:76097511-76097530 | MS.gene072051:CDS | 30.0% |
! | ATTTTCATGAAAGACTCAAC+GGG | + | chr2.4:76097561-76097580 | MS.gene072051:CDS | 30.0% |
! | GTCGGTTAATTTACCAATTT+TGG | + | chr2.4:76099245-76099264 | MS.gene072051:intron | 30.0% |
! | TTTTCACAATTCCCATATCA+AGG | + | chr2.4:76099997-76100016 | MS.gene072051:CDS | 30.0% |
!! | AAAACAAACGAGGTTTTATG+AGG | - | chr2.4:76098956-76098975 | None:intergenic | 30.0% |
!! | AATAAGCATTGATGTCAAAC+GGG | - | chr2.4:76099088-76099107 | None:intergenic | 30.0% |
!! | CAATAAGCATTGATGTCAAA+CGG | - | chr2.4:76099089-76099108 | None:intergenic | 30.0% |
!!! | AATTTTTTTGTTTGGGGGAA+TGG | - | chr2.4:76099695-76099714 | None:intergenic | 30.0% |
!!! | AGAATTTTTCAAGACACATG+TGG | - | chr2.4:76098620-76098639 | None:intergenic | 30.0% |
!!! | ATGCAACTTTGGAATTTTGA+CGG | - | chr2.4:76097022-76097041 | None:intergenic | 30.0% |
AATTGTTTACTATCCTCGAG+GGG | + | chr2.4:76097710-76097729 | MS.gene072051:CDS | 35.0% | |
ACAACCAATTTAACACCGTA+TGG | - | chr2.4:76099024-76099043 | None:intergenic | 35.0% | |
ATAGAGATTGTCCCTTGATA+TGG | - | chr2.4:76097846-76097865 | None:intergenic | 35.0% | |
CAAAAGAAACAACTTCATCG+CGG | - | chr2.4:76097287-76097306 | None:intergenic | 35.0% | |
CAACGGGAAAGTTATTTGTT+GGG | + | chr2.4:76097577-76097596 | MS.gene072051:CDS | 35.0% | |
CCCACATAGAGAGATTATTA+CGG | + | chr2.4:76098923-76098942 | MS.gene072051:intron | 35.0% | |
CCGTAATAATCTCTCTATGT+GGG | - | chr2.4:76098926-76098945 | None:intergenic | 35.0% | |
CGTTTGACATCAATGCTTAT+TGG | + | chr2.4:76099087-76099106 | MS.gene072051:intron | 35.0% | |
GAAATTGTTTACTATCCTCG+AGG | + | chr2.4:76097708-76097727 | MS.gene072051:CDS | 35.0% | |
GAGAACAAGTATGTTACTGT+CGG | + | chr2.4:76099227-76099246 | MS.gene072051:intron | 35.0% | |
GTTCTGATGTTAACAATGCT+CGG | + | chr2.4:76097322-76097341 | MS.gene072051:CDS | 35.0% | |
TAGAGATTGTCCCTTGATAT+GGG | - | chr2.4:76097845-76097864 | None:intergenic | 35.0% | |
TCAAAGAGCAGTAACTAACT+AGG | - | chr2.4:76099137-76099156 | None:intergenic | 35.0% | |
TCAACGGGAAAGTTATTTGT+TGG | + | chr2.4:76097576-76097595 | MS.gene072051:CDS | 35.0% | |
TCCGTAATAATCTCTCTATG+TGG | - | chr2.4:76098927-76098946 | None:intergenic | 35.0% | |
TCTTGAAAACCCTAAAGAAG+AGG | + | chr2.4:76097245-76097264 | MS.gene072051:CDS | 35.0% | |
TGCCCAACTAAGTGATAAAA+AGG | + | chr2.4:76099733-76099752 | MS.gene072051:intron | 35.0% | |
TTCAGTAGAATCGTATGTGT+CGG | + | chr2.4:76098084-76098103 | MS.gene072051:intron | 35.0% | |
TTGAACAATATGGTGCATTG+TGG | + | chr2.4:76099482-76099501 | MS.gene072051:intron | 35.0% | |
! | TGATTGGTGTGATTTTGTAG+TGG | + | chr2.4:76097734-76097753 | MS.gene072051:CDS | 35.0% |
! | TGCAATATCGATTGGTGTAA+TGG | - | chr2.4:76098700-76098719 | None:intergenic | 35.0% |
! | TGTCAAACGGGTATTTTCAT+TGG | - | chr2.4:76099076-76099095 | None:intergenic | 35.0% |
! | TTGGGATGAATTTCAAGTCT+CGG | + | chr2.4:76099607-76099626 | MS.gene072051:CDS | 35.0% |
! | TTGTAGAAAAGAGTGTGTGT+GGG | - | chr2.4:76097112-76097131 | None:intergenic | 35.0% |
! | TTTGTAGAAAAGAGTGTGTG+TGG | - | chr2.4:76097113-76097132 | None:intergenic | 35.0% |
!!! | AACACCGTATGGTTTTATGA+AGG | - | chr2.4:76099013-76099032 | None:intergenic | 35.0% |
!!! | CTTCTTTAGGGTTTTCAAGA+TGG | - | chr2.4:76097245-76097264 | None:intergenic | 35.0% |
AACACACTCACAAACACACA+CGG | + | chr2.4:76097968-76097987 | MS.gene072051:intron | 40.0% | |
AATGAGATCACTTCAACGGA+AGG | + | chr2.4:76099791-76099810 | MS.gene072051:intron | 40.0% | |
ACATCCTCACTCTTGCAAAA+AGG | - | chr2.4:76098430-76098449 | None:intergenic | 40.0% | |
AGATTGGCAACCTCTTCTTT+AGG | - | chr2.4:76097258-76097277 | None:intergenic | 40.0% | |
ATATGGTGCATTGTGGCTAA+TGG | + | chr2.4:76099489-76099508 | MS.gene072051:intron | 40.0% | |
ATGAGATCACTTCAACGGAA+GGG | + | chr2.4:76099792-76099811 | MS.gene072051:intron | 40.0% | |
CTAACTAGGATCGTCTCTAA+TGG | - | chr2.4:76099123-76099142 | None:intergenic | 40.0% | |
CTATTTGCCACAATTCAAGG+AGG | + | chr2.4:76098544-76098563 | MS.gene072051:intron | 40.0% | |
CTTCAAGGATCCCATATCAA+GGG | + | chr2.4:76097832-76097851 | MS.gene072051:CDS | 40.0% | |
GATTGGCAACCTCTTCTTTA+GGG | - | chr2.4:76097257-76097276 | None:intergenic | 40.0% | |
GCACTATTTGCCACAATTCA+AGG | + | chr2.4:76098541-76098560 | MS.gene072051:intron | 40.0% | |
GGCAAATAGTGCATTGTGAT+TGG | - | chr2.4:76098533-76098552 | None:intergenic | 40.0% | |
TAATTTATGGCGCATGCTTC+AGG | + | chr2.4:76097881-76097900 | MS.gene072051:CDS | 40.0% | |
TATATTGCTTCGTGCCCTAT+AGG | + | chr2.4:76099176-76099195 | MS.gene072051:intron | 40.0% | |
TCTTCAAGGATCCCATATCA+AGG | + | chr2.4:76097831-76097850 | MS.gene072051:CDS | 40.0% | |
TGAAACTTCACCATGAACGT+CGG | - | chr2.4:76097436-76097455 | None:intergenic | 40.0% | |
TGTGGCTGAAAAATAGGAAG+TGG | + | chr2.4:76098567-76098586 | MS.gene072051:intron | 40.0% | |
TGTTAAGAGGAAGAAACTCG+TGG | + | chr2.4:76097524-76097543 | MS.gene072051:CDS | 40.0% | |
! | AAAAGAGTGTGTGTGGGTAA+TGG | - | chr2.4:76097106-76097125 | None:intergenic | 40.0% |
! | AGATGGACATCGTTGGTTAT+TGG | - | chr2.4:76097228-76097247 | None:intergenic | 40.0% |
! | AGTTATTTGTTGGGATTCGC+AGG | + | chr2.4:76097586-76097605 | MS.gene072051:CDS | 40.0% |
! | GCATTGTGGCTAATGGTTTT+GGG | + | chr2.4:76099496-76099515 | MS.gene072051:intron | 40.0% |
! | GTAATGGAGGAAGAAGAAGA+AGG | - | chr2.4:76097090-76097109 | None:intergenic | 40.0% |
! | TGCATTGTGGCTAATGGTTT+TGG | + | chr2.4:76099495-76099514 | MS.gene072051:intron | 40.0% |
! | TTTTTGCAAGAGTGAGGATG+TGG | + | chr2.4:76098429-76098448 | MS.gene072051:intron | 40.0% |
!! | AGTAATGGAGGCATTGAAGT+TGG | + | chr2.4:76097665-76097684 | MS.gene072051:CDS | 40.0% |
!! | CAAACGAGGTTTTATGAGGA+AGG | - | chr2.4:76098952-76098971 | None:intergenic | 40.0% |
!! | GTTTTCAAGATGGACATCGT+TGG | - | chr2.4:76097235-76097254 | None:intergenic | 40.0% |
!! | TGGTGTGATTTTGTAGTGGA+TGG | + | chr2.4:76097738-76097757 | MS.gene072051:CDS | 40.0% |
!!! | AAGAAGGAGAAGCGTTTTCT+AGG | - | chr2.4:76097074-76097093 | None:intergenic | 40.0% |
AAATAACCTCAACCCACCAC+GGG | - | chr2.4:76099652-76099671 | None:intergenic | 45.0% | |
ACATTATCGGCACAAAAGCG+AGG | - | chr2.4:76097360-76097379 | None:intergenic | 45.0% | |
AGCCATCATCTCCCTTGATA+TGG | - | chr2.4:76100012-76100031 | None:intergenic | 45.0% | |
CCTCACTCTTGCAAAAAGGT+AGG | - | chr2.4:76098426-76098445 | None:intergenic | 45.0% | |
CGAAGGAAACTTTGTCTCAG+AGG | - | chr2.4:76099897-76099916 | None:intergenic | 45.0% | |
GAAATAACCTCAACCCACCA+CGG | - | chr2.4:76099653-76099672 | None:intergenic | 45.0% | |
GAGACGATACAAGGAGTGAA+AGG | - | chr2.4:76097144-76097163 | None:intergenic | 45.0% | |
GCACATGTGTGCCAAATTTC+TGG | - | chr2.4:76096991-76097010 | None:intergenic | 45.0% | |
GCCATCATCTCCCTTGATAT+GGG | - | chr2.4:76100011-76100030 | None:intergenic | 45.0% | |
GTGTTGCAATTGTGAGTCGA+AGG | - | chr2.4:76099914-76099933 | None:intergenic | 45.0% | |
TCAACAGCTGAGACGATACA+AGG | - | chr2.4:76097153-76097172 | None:intergenic | 45.0% | |
TCCCATATCAAGGGAGATGA+TGG | + | chr2.4:76100007-76100026 | MS.gene072051:CDS | 45.0% | |
TCCTAATGTCGGACACACAT+CGG | - | chr2.4:76098119-76098138 | None:intergenic | 45.0% | |
TTCATCGCGGTTGTTGAGAT+TGG | - | chr2.4:76097274-76097293 | None:intergenic | 45.0% | |
! | AAGTTTTACCATGTCTGCCG+CGG | + | chr2.4:76097456-76097475 | MS.gene072051:CDS | 45.0% |
! | AGGAGGTGTGGCTGAAAAAT+AGG | + | chr2.4:76098561-76098580 | MS.gene072051:intron | 45.0% |
! | CCTACCTTTTTGCAAGAGTG+AGG | + | chr2.4:76098423-76098442 | MS.gene072051:intron | 45.0% |
! | CGTTTTCTAGGTGACCTTGT+GGG | - | chr2.4:76097062-76097081 | None:intergenic | 45.0% |
! | GAAGAAGGATGAGTTGGAGA+AGG | + | chr2.4:76097641-76097660 | MS.gene072051:CDS | 45.0% |
! | GATGATGGCTATAAGAGCTG+CGG | + | chr2.4:76100022-76100041 | MS.gene072051:CDS | 45.0% |
! | TGAGTTGGAGAAGGCAGTAA+TGG | + | chr2.4:76097650-76097669 | MS.gene072051:CDS | 45.0% |
!! | AATGGAGGCATTGAAGTTGG+CGG | + | chr2.4:76097668-76097687 | MS.gene072051:CDS | 45.0% |
!!! | CTTTGGAATTTTGACGGCAG+CGG | - | chr2.4:76097016-76097035 | None:intergenic | 45.0% |
!!! | ATATTTTAATATATCAATAA+TGG | + | chr2.4:76098896-76098915 | MS.gene072051:intron | 5.0% |
!!! | TATTTTAATATATCAATAAT+GGG | + | chr2.4:76098897-76098916 | MS.gene072051:intron | 5.0% |
AAGAGGAAGAAACTCGTGGC+TGG | + | chr2.4:76097528-76097547 | MS.gene072051:CDS | 50.0% | |
AAGCCGCGGGAAGACATTAT+CGG | - | chr2.4:76097373-76097392 | None:intergenic | 50.0% | |
ACAAAGACCTCATCCGTGTG+AGG | - | chr2.4:76097189-76097208 | None:intergenic | 50.0% | |
ACCGATGTGTGTCCGACATT+AGG | + | chr2.4:76098115-76098134 | MS.gene072051:intron | 50.0% | |
ACTATCCTCGAGGGGATGAT+TGG | + | chr2.4:76097718-76097737 | MS.gene072051:CDS | 50.0% | |
AGCCACACCTCCTTGAATTG+TGG | - | chr2.4:76098554-76098573 | None:intergenic | 50.0% | |
CATGAACGTCGGTAACGAAC+AGG | - | chr2.4:76097425-76097444 | None:intergenic | 50.0% | |
CGCATGTGCGTCCAGAAATT+TGG | + | chr2.4:76096977-76096996 | MS.gene072051:CDS | 50.0% | |
CTGTTCGTTACCGACGTTCA+TGG | + | chr2.4:76097423-76097442 | MS.gene072051:CDS | 50.0% | |
GAAGTTGGCGGAAGAGAACA+AGG | + | chr2.4:76097680-76097699 | MS.gene072051:CDS | 50.0% | |
GGAGCAGAAGAAGGATGAGT+TGG | + | chr2.4:76097635-76097654 | MS.gene072051:CDS | 50.0% | |
GTTGGAGAAGGCAGTAATGG+AGG | + | chr2.4:76097653-76097672 | MS.gene072051:CDS | 50.0% | |
TGCCACAATTCAAGGAGGTG+TGG | + | chr2.4:76098549-76098568 | MS.gene072051:intron | 50.0% | |
TGTTTCTCTTGGGAAACCCG+CGG | - | chr2.4:76097476-76097495 | None:intergenic | 50.0% | |
TTTGTTTGGGGGAATGGCGT+CGG | - | chr2.4:76099689-76099708 | None:intergenic | 50.0% | |
! | AGAGTGTGTGTGGGTAATGG+AGG | - | chr2.4:76097103-76097122 | None:intergenic | 50.0% |
! | AGTTTTACCATGTCTGCCGC+GGG | + | chr2.4:76097457-76097476 | MS.gene072051:CDS | 50.0% |
! | ATTTCTGGACGCACATGCGA+TGG | - | chr2.4:76096976-76096995 | None:intergenic | 50.0% |
! | GCGTTTTCTAGGTGACCTTG+TGG | - | chr2.4:76097063-76097082 | None:intergenic | 50.0% |
!! | AACGAACAGGTGTTGAGACG+AGG | - | chr2.4:76097412-76097431 | None:intergenic | 50.0% |
!! | CAGGTGTTGAGACGAGGATT+CGG | - | chr2.4:76097406-76097425 | None:intergenic | 50.0% |
!! | GAACACGCAGTTTGTTGCAG+CGG | + | chr2.4:76097608-76097627 | MS.gene072051:CDS | 50.0% |
AAGACGAGTCAACCCGTGGT+GGG | + | chr2.4:76099637-76099656 | MS.gene072051:CDS | 55.0% | |
CGGCACAAAAGCGAGGTATG+TGG | - | chr2.4:76097353-76097372 | None:intergenic | 55.0% | |
GACCTCATCCGTGTGAGGAT+CGG | - | chr2.4:76097184-76097203 | None:intergenic | 55.0% | |
TCACACCAATCATCCCCTCG+AGG | - | chr2.4:76097726-76097745 | None:intergenic | 55.0% | |
TCTCCTTGCCGATCCTCACA+CGG | + | chr2.4:76097173-76097192 | MS.gene072051:CDS | 55.0% | |
TTCCAAGACGAGTCAACCCG+TGG | + | chr2.4:76099633-76099652 | MS.gene072051:CDS | 55.0% | |
! | GTGCCGATAATGTCTTCCCG+CGG | + | chr2.4:76097367-76097386 | MS.gene072051:CDS | 55.0% |
CAAGACGAGTCAACCCGTGG+TGG | + | chr2.4:76099636-76099655 | MS.gene072051:CDS | 60.0% | |
CATCCGTGTGAGGATCGGCA+AGG | - | chr2.4:76097179-76097198 | None:intergenic | 60.0% | |
GAGACGAGGATTCGGCCTCT+AGG | - | chr2.4:76097398-76097417 | None:intergenic | 60.0% | |
TGCCGATCCTCACACGGATG+AGG | + | chr2.4:76097179-76097198 | MS.gene072051:CDS | 60.0% | |
!! | AGTCAACCCGTGGTGGGTTG+AGG | + | chr2.4:76099643-76099662 | MS.gene072051:CDS | 60.0% |
!! | CACCACGGGTTGACTCGTCT+TGG | - | chr2.4:76099638-76099657 | None:intergenic | 60.0% |
!! | CACGCAGTTTGTTGCAGCGG+CGG | + | chr2.4:76097611-76097630 | MS.gene072051:CDS | 60.0% |
CTTCCCGCGGCTTGACCTAG+AGG | + | chr2.4:76097380-76097399 | MS.gene072051:CDS | 65.0% | |
TCGGCCTCTAGGTCAAGCCG+CGG | - | chr2.4:76097387-76097406 | None:intergenic | 65.0% | |
TGGGAAACCCGCGGCAGACA+TGG | - | chr2.4:76097467-76097486 | None:intergenic | 65.0% | |
!! | GCAGTTTGTTGCAGCGGCGG+CGG | + | chr2.4:76097614-76097633 | MS.gene072051:CDS | 65.0% |
AGCGGCGGCGGAGCAGAAGA+AGG | + | chr2.4:76097626-76097645 | MS.gene072051:CDS | 70.0% | |
CGGCCTCTAGGTCAAGCCGC+GGG | - | chr2.4:76097386-76097405 | None:intergenic | 70.0% | |
! | TGGGGGAATGGCGTCGGAGC+AGG | - | chr2.4:76099683-76099702 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 76096955 | 76100057 | 76096955 | ID=MS.gene072051 |
chr2.4 | mRNA | 76096955 | 76100057 | 76096955 | ID=MS.gene072051.t1;Parent=MS.gene072051 |
chr2.4 | exon | 76096955 | 76097902 | 76096955 | ID=MS.gene072051.t1.exon1;Parent=MS.gene072051.t1 |
chr2.4 | CDS | 76096955 | 76097902 | 76096955 | ID=cds.MS.gene072051.t1;Parent=MS.gene072051.t1 |
chr2.4 | exon | 76099602 | 76099664 | 76099602 | ID=MS.gene072051.t1.exon2;Parent=MS.gene072051.t1 |
chr2.4 | CDS | 76099602 | 76099664 | 76099602 | ID=cds.MS.gene072051.t1;Parent=MS.gene072051.t1 |
chr2.4 | exon | 76099983 | 76100057 | 76099983 | ID=MS.gene072051.t1.exon3;Parent=MS.gene072051.t1 |
chr2.4 | CDS | 76099983 | 76100057 | 76099983 | ID=cds.MS.gene072051.t1;Parent=MS.gene072051.t1 |
Gene Sequence |
Protein sequence |