AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene072318

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072318.t1 MTR_7g091810 97.388 268 7 0 1 268 1 268 0.0 538
MS.gene072318.t1 MTR_0100s0160 67.247 287 73 4 1 268 1 285 3.61e-132 375
MS.gene072318.t1 MTR_6g008210 43.949 157 80 3 2 154 5 157 2.35e-38 133
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072318.t1 AT2G41835 59.155 284 93 5 1 268 1 277 6.29e-112 324
MS.gene072318.t1 AT3G57480 57.090 268 94 2 1 268 1 247 1.21e-103 301
MS.gene072318.t1 AT3G57480 57.090 268 94 2 1 268 1 247 1.21e-103 301
MS.gene072318.t1 AT3G28210 44.872 156 77 3 2 154 5 154 1.55e-36 128
MS.gene072318.t1 AT3G28210 44.872 156 77 3 2 154 5 154 1.55e-36 128
MS.gene072318.t1 AT5G48205 55.963 109 20 3 1 106 1 84 7.04e-29 108

Find 64 sgRNAs with CRISPR-Local

Find 138 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGATCTTGGTCTGGAATT+AGG 0.236801 7.2:-17300128 None:intergenic
AGGAGTGGTGGCAACCAATA+TGG 0.253022 7.2:+17300603 MS.gene072318:CDS
TGATGTGGTTGAAGTTAAAT+TGG 0.262744 7.2:-17300415 None:intergenic
CTTCAACCACATCATCTAAA+TGG 0.280674 7.2:+17300424 MS.gene072318:CDS
ACCAAGATCCAAACATAGTT+TGG 0.297216 7.2:+17300139 MS.gene072318:CDS
CCCAAACTATGTTTGGATCT+TGG 0.316294 7.2:-17300140 None:intergenic
ACATGCTCTACAAGGGAAAC+TGG 0.328561 7.2:-17300681 None:intergenic
TTGCCTAGATCTGGGAATTC+AGG 0.358612 7.2:-17298887 None:intergenic
CACTTGTGATCGTTGCAATC+AGG 0.365381 7.2:+17298955 MS.gene072318:CDS
GAACAATGCTTGCCTAGATC+TGG 0.368668 7.2:-17298896 None:intergenic
TATGTCCACTTTGTGCTAAA+GGG 0.378295 7.2:+17300100 MS.gene072318:CDS
TGATGCTCCCAAACTATGTT+TGG 0.385416 7.2:-17300147 None:intergenic
GGTCCAGGACATTTGTGATC+AGG 0.386396 7.2:-17300321 None:intergenic
ACACCTTCTTTGCCCCATAT+TGG 0.386967 7.2:-17300617 None:intergenic
GGAGTGGTGGCAACCAATAT+GGG 0.397987 7.2:+17300604 MS.gene072318:CDS
CATTGTTTGAAGCACAGGTT+TGG 0.404986 7.2:+17300297 MS.gene072318:CDS
ATATGTCCACTTTGTGCTAA+AGG 0.412254 7.2:+17300099 MS.gene072318:CDS
AACAGTGACATCGTGTTTGT+TGG 0.412502 7.2:-17300073 None:intergenic
TTGACCATTGTTTGAAGCAC+AGG 0.415680 7.2:+17300292 MS.gene072318:CDS
GACGTCAAGCCTTCTTGACT+TGG 0.417683 7.2:+17300446 MS.gene072318:CDS
ACTATGTTTGGATCTTGGTC+TGG 0.435501 7.2:-17300135 None:intergenic
CCCTCTCAACATGCTCTACA+AGG 0.443451 7.2:-17300689 None:intergenic
ACTAAGGTCTCTCTGCATCC+TGG 0.445762 7.2:-17300234 None:intergenic
CGGTAATATTAATAATCAAC+TGG 0.450182 7.2:+17300506 MS.gene072318:CDS
CCAAGATCCAAACATAGTTT+GGG 0.458482 7.2:+17300140 MS.gene072318:CDS
TTCCTCGGCCACTAGTTTGG+TGG 0.466086 7.2:+17300557 MS.gene072318:CDS
ACAGTGACATCGTGTTTGTT+GGG 0.469931 7.2:-17300072 None:intergenic
GTCTCTCTGCATCCTGGGAC+AGG 0.472023 7.2:-17300228 None:intergenic
GATGTGGTTGAAGTTAAATT+GGG 0.475957 7.2:-17300414 None:intergenic
GATTGTGTTTGAGAATACTA+AGG 0.477004 7.2:-17300250 None:intergenic
GCATGTCCCAAGTGCAGTAA+AGG 0.479086 7.2:+17300648 MS.gene072318:CDS
CTAAGGTCTCTCTGCATCCT+GGG 0.483016 7.2:-17300233 None:intergenic
GCTTCTAAATTGAGTGGGAT+AGG 0.483203 7.2:+17300468 MS.gene072318:CDS
ACTCCTGAATTCCCAGATCT+AGG 0.493436 7.2:+17298884 MS.gene072318:CDS
CAACCAATATGGGGCAAAGA+AGG 0.517036 7.2:+17300614 MS.gene072318:CDS
CTCAAACACAATCAAGTGTA+GGG 0.519840 7.2:+17300260 MS.gene072318:CDS
ATTTAGAAGCCAAGTCAAGA+AGG 0.521688 7.2:-17300455 None:intergenic
GGACCTGATCACAAATGTCC+TGG 0.523810 7.2:+17300318 MS.gene072318:CDS
CATGCTCTACAAGGGAAACT+GGG 0.533711 7.2:-17300680 None:intergenic
ACTTGGCTTCTAAATTGAGT+GGG 0.535363 7.2:+17300463 MS.gene072318:CDS
AACAATGCTTGCCTAGATCT+GGG 0.537422 7.2:-17298895 None:intergenic
CCTTGTAGAGCATGTTGAGA+GGG 0.543468 7.2:+17300689 MS.gene072318:CDS
GACTTGGCTTCTAAATTGAG+TGG 0.550800 7.2:+17300462 MS.gene072318:CDS
ATCCACCAAACTAGTGGCCG+AGG 0.554475 7.2:-17300559 None:intergenic
CGCATGATCCACCAAACTAG+TGG 0.559921 7.2:-17300565 None:intergenic
CAAACCTGTGCTTCAAACAA+TGG 0.566927 7.2:-17300296 None:intergenic
GAGCATGTTGAGAGGGATCA+TGG 0.569049 7.2:+17300696 MS.gene072318:CDS
ATGTCCACTTTGTGCTAAAG+GGG 0.570588 7.2:+17300101 MS.gene072318:CDS
TCTCAAACACAATCAAGTGT+AGG 0.571728 7.2:+17300259 MS.gene072318:CDS
TGACGTCCATTTAGATGATG+TGG 0.573502 7.2:-17300430 None:intergenic
ATTGCAACGATCACAAGTGA+AGG 0.586850 7.2:-17298951 None:intergenic
AATTATGCTCAATATAACTT+CGG 0.599455 7.2:-17300041 None:intergenic
ATAGGACAGAGCAGTGGCAG+CGG 0.607545 7.2:+17300486 MS.gene072318:CDS
CCCTTGTAGAGCATGTTGAG+AGG 0.611040 7.2:+17300688 MS.gene072318:CDS
GAAAACTTAGCATCACATAG+TGG 0.613925 7.2:-17300537 None:intergenic
AAAGTTCATCAAAGGAGTGG+TGG 0.618343 7.2:+17300591 MS.gene072318:CDS
CGAACCCCTTTAGCACAAAG+TGG 0.621156 7.2:-17300105 None:intergenic
AGTCTTTGGAATATGAGTAG+TGG 0.643915 7.2:+17300375 MS.gene072318:CDS
TTGCAACGATCACAAGTGAA+GGG 0.653221 7.2:-17298950 None:intergenic
CCTCTCAACATGCTCTACAA+GGG 0.654661 7.2:-17300688 None:intergenic
GAGTGGTGGCAACCAATATG+GGG 0.662707 7.2:+17300605 MS.gene072318:CDS
AATCAAGTGTAGGGACTGTG+AGG 0.678787 7.2:+17300269 MS.gene072318:CDS
AGTGGGATAGGACAGAGCAG+TGG 0.703021 7.2:+17300480 MS.gene072318:CDS
CATGTTGAGAGGGATCATGG+TGG 0.804557 7.2:+17300699 MS.gene072318:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTATTTTCATAAATTATTT+TGG + chr7.2:17299742-17299761 MS.gene072318:intron 10.0%
!! AAGAAAATAATAGAATGAAA+CGG - chr7.2:17299055-17299074 None:intergenic 15.0%
!! AATCATTTACATAAAATGTT+TGG - chr7.2:17299810-17299829 None:intergenic 15.0%
!!! AAAACAATGTTTTTAATCAA+AGG - chr7.2:17299114-17299133 None:intergenic 15.0%
!!! ATTTAAGTGTTTGATTTATT+GGG + chr7.2:17299195-17299214 MS.gene072318:intron 15.0%
!!! GATTAAAAACATTGTTTTAA+TGG + chr7.2:17299116-17299135 MS.gene072318:intron 15.0%
!! AATTATGCTCAATATAACTT+CGG - chr7.2:17300044-17300063 None:intergenic 20.0%
!! AGAAAATAATAGAATGAAAC+GGG - chr7.2:17299054-17299073 None:intergenic 20.0%
!! CATAACAATTATCATACTAA+CGG + chr7.2:17299296-17299315 MS.gene072318:intron 20.0%
!!! CATTTAAGTGTTTGATTTAT+TGG + chr7.2:17299194-17299213 MS.gene072318:intron 20.0%
!!! GGATTTTTTTCAAAAAGAAA+TGG + chr7.2:17299426-17299445 MS.gene072318:intron 20.0%
!!! TTCATTCTATTATTTTCTTC+TGG + chr7.2:17299056-17299075 MS.gene072318:intron 20.0%
!!! TTTAAGTGTTTGATTTATTG+GGG + chr7.2:17299196-17299215 MS.gene072318:intron 20.0%
! AATAAGTTAGAAAGATCCTA+TGG + chr7.2:17299777-17299796 MS.gene072318:intron 25.0%
! ACTTAAAGTAAATCATTTGC+TGG + chr7.2:17299532-17299551 MS.gene072318:intron 25.0%
! ATTTCAGAATAATTATGCCT+CGG - chr7.2:17299595-17299614 None:intergenic 25.0%
! CGGTAATATTAATAATCAAC+TGG + chr7.2:17300506-17300525 MS.gene072318:CDS 25.0%
! GAAACTTAATTAAGTGCTTA+CGG + chr7.2:17299693-17299712 MS.gene072318:intron 25.0%
! TAATTCATATGAATATGCCT+CGG - chr7.2:17299568-17299587 None:intergenic 25.0%
! TCAAAATTCTTATCGAAACT+AGG - chr7.2:17299853-17299872 None:intergenic 25.0%
! TCACAAGTTTCTTTCTATTA+AGG + chr7.2:17299614-17299633 MS.gene072318:intron 25.0%
!! AACCACAAATTTCTAAAAGT+TGG + chr7.2:17299474-17299493 MS.gene072318:intron 25.0%
!! ACCACAAATTTCTAAAAGTT+GGG + chr7.2:17299475-17299494 MS.gene072318:intron 25.0%
!! GTTTTTCATTTATGAGTCTT+TGG + chr7.2:17300361-17300380 MS.gene072318:CDS 25.0%
!! TTAAGTGTTTGATTTATTGG+GGG + chr7.2:17299197-17299216 MS.gene072318:intron 25.0%
!!! AAAACTTGTTTCCAACTTTT+TGG - chr7.2:17300346-17300365 None:intergenic 25.0%
!!! AAACTTGTTTCCAACTTTTT+GGG - chr7.2:17300345-17300364 None:intergenic 25.0%
!!! TGGCTTTTTCATAATTTGAT+GGG - chr7.2:17300191-17300210 None:intergenic 25.0%
AAAAAACCTTTACTGCACTT+GGG - chr7.2:17300657-17300676 None:intergenic 30.0%
AAAAAAGTTCATCAAAGGAG+TGG + chr7.2:17300588-17300607 MS.gene072318:CDS 30.0%
AACAATATACCTGCAAAAGA+TGG - chr7.2:17300014-17300033 None:intergenic 30.0%
AAGCTGGATTGTGTATATAT+TGG + chr7.2:17299385-17299404 MS.gene072318:intron 30.0%
AATTAAGCAACTCTTTCTGT+TGG + chr7.2:17299973-17299992 MS.gene072318:intron 30.0%
ATGCGAAAAAAGTTCATCAA+AGG + chr7.2:17300583-17300602 MS.gene072318:CDS 30.0%
GAGTTGCTTAATTGAAAACA+AGG - chr7.2:17299966-17299985 None:intergenic 30.0%
GATGTGGTTGAAGTTAAATT+GGG - chr7.2:17300417-17300436 None:intergenic 30.0%
GATTGTGTTTGAGAATACTA+AGG - chr7.2:17300253-17300272 None:intergenic 30.0%
GGATTGTGTATATATTGGTA+TGG + chr7.2:17299390-17299409 MS.gene072318:intron 30.0%
GGTTCACAAAACTATAGTAA+TGG - chr7.2:17299458-17299477 None:intergenic 30.0%
TATATAGATGACAACCTTAC+TGG - chr7.2:17299659-17299678 None:intergenic 30.0%
TGAGTATGATGTGCATATAT+AGG + chr7.2:17299922-17299941 MS.gene072318:intron 30.0%
TGATGTGGTTGAAGTTAAAT+TGG - chr7.2:17300418-17300437 None:intergenic 30.0%
TTCATATGAATTATGAACCG+AGG + chr7.2:17299575-17299594 MS.gene072318:intron 30.0%
! CTTTTGCAGGTATATTGTTT+GGG + chr7.2:17300015-17300034 MS.gene072318:intron 30.0%
! TCTTTTGCAGGTATATTGTT+TGG + chr7.2:17300014-17300033 MS.gene072318:intron 30.0%
! TGTCATCTATATAGAGTGTT+CGG + chr7.2:17299666-17299685 MS.gene072318:intron 30.0%
! TTTTGCAGGTATATTGTTTG+GGG + chr7.2:17300016-17300035 MS.gene072318:intron 30.0%
!! TCCCAACTTTTAGAAATTTG+TGG - chr7.2:17299479-17299498 None:intergenic 30.0%
!!! AGGACATTTTTTCTTCTTTG+TGG - chr7.2:17300211-17300230 None:intergenic 30.0%
!!! GTGGCTTTTTCATAATTTGA+TGG - chr7.2:17300192-17300211 None:intergenic 30.0%
!!! TGGTATGGTATTTTAGAGTA+AGG + chr7.2:17299405-17299424 MS.gene072318:intron 30.0%
ACCAAGATCCAAACATAGTT+TGG + chr7.2:17300139-17300158 MS.gene072318:CDS 35.0%
ACTTGGCTTCTAAATTGAGT+GGG + chr7.2:17300463-17300482 MS.gene072318:CDS 35.0%
ATATGTCCACTTTGTGCTAA+AGG + chr7.2:17300099-17300118 MS.gene072318:CDS 35.0%
ATTTAGAAGCCAAGTCAAGA+AGG - chr7.2:17300458-17300477 None:intergenic 35.0%
CAAAAAACCTTTACTGCACT+TGG - chr7.2:17300658-17300677 None:intergenic 35.0%
CCAAGATCCAAACATAGTTT+GGG + chr7.2:17300140-17300159 MS.gene072318:CDS 35.0%
CTCAAACACAATCAAGTGTA+GGG + chr7.2:17300260-17300279 MS.gene072318:CDS 35.0%
CTTCAACCACATCATCTAAA+TGG + chr7.2:17300424-17300443 MS.gene072318:CDS 35.0%
GAAAACTTAGCATCACATAG+TGG - chr7.2:17300540-17300559 None:intergenic 35.0%
GAAAAGTTGTAGCAATGTGA+TGG + chr7.2:17299894-17299913 MS.gene072318:intron 35.0%
GATGTGCATATATAGGATTG+TGG + chr7.2:17299929-17299948 MS.gene072318:intron 35.0%
TATGTCCACTTTGTGCTAAA+GGG + chr7.2:17300100-17300119 MS.gene072318:CDS 35.0%
TCTCAAACACAATCAAGTGT+AGG + chr7.2:17300259-17300278 MS.gene072318:CDS 35.0%
! ACAGAATTGACTTTGAAAGC+TGG + chr7.2:17299369-17299388 MS.gene072318:intron 35.0%
! ATGTGATGCTAAGTTTTCCT+CGG + chr7.2:17300542-17300561 MS.gene072318:CDS 35.0%
! TGTTTGATTTATTGGGGGTT+GGG + chr7.2:17299202-17299221 MS.gene072318:intron 35.0%
!! AGTCTTTGGAATATGAGTAG+TGG + chr7.2:17300375-17300394 MS.gene072318:CDS 35.0%
!!! ATTTTGACTTCTCCAGCTTT+TGG + chr7.2:17299866-17299885 MS.gene072318:intron 35.0%
!!! CAAGTGCAGTAAAGGTTTTT+TGG + chr7.2:17300656-17300675 MS.gene072318:CDS 35.0%
!!! TTTTGACTTCTCCAGCTTTT+GGG + chr7.2:17299867-17299886 MS.gene072318:intron 35.0%
AAAGTTCATCAAAGGAGTGG+TGG + chr7.2:17300591-17300610 MS.gene072318:CDS 40.0%
AACAATGCTTGCCTAGATCT+GGG - chr7.2:17298898-17298917 None:intergenic 40.0%
AACAGTGACATCGTGTTTGT+TGG - chr7.2:17300076-17300095 None:intergenic 40.0%
AAGAAAAAATGTCCTGTCCC+AGG + chr7.2:17300216-17300235 MS.gene072318:CDS 40.0%
ACAGTGACATCGTGTTTGTT+GGG - chr7.2:17300075-17300094 None:intergenic 40.0%
ACTATGTTTGGATCTTGGTC+TGG - chr7.2:17300138-17300157 None:intergenic 40.0%
AGTTCAACTAATTCGAGCTG+AGG + chr7.2:17299226-17299245 MS.gene072318:intron 40.0%
ATGTCCACTTTGTGCTAAAG+GGG + chr7.2:17300101-17300120 MS.gene072318:CDS 40.0%
ATTGCAACGATCACAAGTGA+AGG - chr7.2:17298954-17298973 None:intergenic 40.0%
CAAACCTGTGCTTCAAACAA+TGG - chr7.2:17300299-17300318 None:intergenic 40.0%
CCCAAACTATGTTTGGATCT+TGG - chr7.2:17300143-17300162 None:intergenic 40.0%
GACTTGGCTTCTAAATTGAG+TGG + chr7.2:17300462-17300481 MS.gene072318:CDS 40.0%
GCTTAATGCAAAAGCCAGTA+AGG + chr7.2:17299642-17299661 MS.gene072318:intron 40.0%
GCTTCTAAATTGAGTGGGAT+AGG + chr7.2:17300468-17300487 MS.gene072318:CDS 40.0%
GTTCAACTAATTCGAGCTGA+GGG + chr7.2:17299227-17299246 MS.gene072318:intron 40.0%
TGACGTCCATTTAGATGATG+TGG - chr7.2:17300433-17300452 None:intergenic 40.0%
TGATGCTCCCAAACTATGTT+TGG - chr7.2:17300150-17300169 None:intergenic 40.0%
TTGCAACGATCACAAGTGAA+GGG - chr7.2:17298953-17298972 None:intergenic 40.0%
! AATGTTTGGCTCATGTCCAT+AGG - chr7.2:17299796-17299815 None:intergenic 40.0%
! ACTTTTCAAACCCCAAAAGC+TGG - chr7.2:17299881-17299900 None:intergenic 40.0%
! ATATCAGCTCCATCTTTTGC+AGG + chr7.2:17300002-17300021 MS.gene072318:intron 40.0%
! CATTGTTTGAAGCACAGGTT+TGG + chr7.2:17300297-17300316 MS.gene072318:CDS 40.0%
! GTGTTTGATTTATTGGGGGT+TGG + chr7.2:17299201-17299220 MS.gene072318:intron 40.0%
! TTGACCATTGTTTGAAGCAC+AGG + chr7.2:17300292-17300311 MS.gene072318:CDS 40.0%
! TTGGATCTTGGTCTGGAATT+AGG - chr7.2:17300131-17300150 None:intergenic 40.0%
!! TTTGACTTCTCCAGCTTTTG+GGG + chr7.2:17299868-17299887 MS.gene072318:intron 40.0%
AATCAAGTGTAGGGACTGTG+AGG + chr7.2:17300269-17300288 MS.gene072318:CDS 45.0%
ACACCTTCTTTGCCCCATAT+TGG - chr7.2:17300620-17300639 None:intergenic 45.0%
ACATGCTCTACAAGGGAAAC+TGG - chr7.2:17300684-17300703 None:intergenic 45.0%
ACTAATTCGAGCTGAGGGTT+AGG + chr7.2:17299232-17299251 MS.gene072318:intron 45.0%
ACTCCTGAATTCCCAGATCT+AGG + chr7.2:17298884-17298903 MS.gene072318:CDS 45.0%
ATGTCCTGGACCCAAAAAGT+TGG + chr7.2:17300332-17300351 MS.gene072318:CDS 45.0%
CAACCAATATGGGGCAAAGA+AGG + chr7.2:17300614-17300633 MS.gene072318:CDS 45.0%
CACTTGTGATCGTTGCAATC+AGG + chr7.2:17298955-17298974 MS.gene072318:CDS 45.0%
CATGCTCTACAAGGGAAACT+GGG - chr7.2:17300683-17300702 None:intergenic 45.0%
CCTCTCAACATGCTCTACAA+GGG - chr7.2:17300691-17300710 None:intergenic 45.0%
CCTTGTAGAGCATGTTGAGA+GGG + chr7.2:17300689-17300708 MS.gene072318:CDS 45.0%
GAACAATGCTTGCCTAGATC+TGG - chr7.2:17298899-17298918 None:intergenic 45.0%
TTGCCTAGATCTGGGAATTC+AGG - chr7.2:17298890-17298909 None:intergenic 45.0%
TTGCTGGAAACATTGAACCG+AGG + chr7.2:17299548-17299567 MS.gene072318:intron 45.0%
!!! GTTTCCAACTTTTTGGGTCC+AGG - chr7.2:17300339-17300358 None:intergenic 45.0%
!! TAATTTCATAAATTAATTTA+AGG - chr7.2:17299011-17299030 None:intergenic 5.0%
ACTAAGGTCTCTCTGCATCC+TGG - chr7.2:17300237-17300256 None:intergenic 50.0%
AGCTGAGGGTTAGGAAGTTG+GGG + chr7.2:17299241-17299260 MS.gene072318:intron 50.0%
AGGAGTGGTGGCAACCAATA+TGG + chr7.2:17300603-17300622 MS.gene072318:CDS 50.0%
CATGTTGAGAGGGATCATGG+TGG + chr7.2:17300699-17300718 MS.gene072318:CDS 50.0%
CCCTCTCAACATGCTCTACA+AGG - chr7.2:17300692-17300711 None:intergenic 50.0%
CCCTTGTAGAGCATGTTGAG+AGG + chr7.2:17300688-17300707 MS.gene072318:CDS 50.0%
CGAACCCCTTTAGCACAAAG+TGG - chr7.2:17300108-17300127 None:intergenic 50.0%
CGCATGATCCACCAAACTAG+TGG - chr7.2:17300568-17300587 None:intergenic 50.0%
CTAAGGTCTCTCTGCATCCT+GGG - chr7.2:17300236-17300255 None:intergenic 50.0%
GACGTCAAGCCTTCTTGACT+TGG + chr7.2:17300446-17300465 MS.gene072318:CDS 50.0%
GAGCATGTTGAGAGGGATCA+TGG + chr7.2:17300696-17300715 MS.gene072318:CDS 50.0%
GAGCTGAGGGTTAGGAAGTT+GGG + chr7.2:17299240-17299259 MS.gene072318:intron 50.0%
GAGTGGTGGCAACCAATATG+GGG + chr7.2:17300605-17300624 MS.gene072318:CDS 50.0%
GCATGTCCCAAGTGCAGTAA+AGG + chr7.2:17300648-17300667 MS.gene072318:CDS 50.0%
GGACCTGATCACAAATGTCC+TGG + chr7.2:17300318-17300337 MS.gene072318:CDS 50.0%
GGAGTGGTGGCAACCAATAT+GGG + chr7.2:17300604-17300623 MS.gene072318:CDS 50.0%
GGTCCAGGACATTTGTGATC+AGG - chr7.2:17300324-17300343 None:intergenic 50.0%
! GTTTTCCTCGGCCACTAGTT+TGG + chr7.2:17300554-17300573 MS.gene072318:CDS 50.0%
AGTGGGATAGGACAGAGCAG+TGG + chr7.2:17300480-17300499 MS.gene072318:CDS 55.0%
ATAGGACAGAGCAGTGGCAG+CGG + chr7.2:17300486-17300505 MS.gene072318:CDS 55.0%
ATCCACCAAACTAGTGGCCG+AGG - chr7.2:17300562-17300581 None:intergenic 55.0%
CGAGCTGAGGGTTAGGAAGT+TGG + chr7.2:17299239-17299258 MS.gene072318:intron 55.0%
GCTGAGGGTTAGGAAGTTGG+GGG + chr7.2:17299242-17299261 MS.gene072318:intron 55.0%
! TTCCTCGGCCACTAGTTTGG+TGG + chr7.2:17300557-17300576 MS.gene072318:CDS 55.0%
GTCTCTCTGCATCCTGGGAC+AGG - chr7.2:17300231-17300250 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 17298878 17300731 17298878 ID=MS.gene072318
chr7.2 mRNA 17298878 17300731 17298878 ID=MS.gene072318.t1;Parent=MS.gene072318
chr7.2 exon 17298878 17298976 17298878 ID=MS.gene072318.t1.exon1;Parent=MS.gene072318.t1
chr7.2 CDS 17298878 17298976 17298878 ID=cds.MS.gene072318.t1;Parent=MS.gene072318.t1
chr7.2 exon 17300024 17300731 17300024 ID=MS.gene072318.t1.exon2;Parent=MS.gene072318.t1
chr7.2 CDS 17300024 17300731 17300024 ID=cds.MS.gene072318.t1;Parent=MS.gene072318.t1
Gene Sequence

>MS.gene072318

ATGGGGACTCCTGAATTCCCAGATCTAGGCAAGCATTGTTCTGTTTCTGATTGCAGACTTATCGATTTCTTGCCCTTCACTTGTGATCGTTGCAATCAGGTTTTGTTTTTCATCTCTCTCTGTTTTTTTTCCTTAAATTAATTTATGAAATTATTGATTAGCAATTTGTGAATCCCGTTTCATTCTATTATTTTCTTCTGGTTATTGCTATGATCAATGCATTTCTTTTATTTCCTTTGATTAAAAACATTGTTTTAATGGTGTTTGTCATTTTAGACAACAAAAATAATGTTTTGTTCTAATGTTGCTAGAACATCATTTAAGTGTTTGATTTATTGGGGGTTGGGTAGTTCAACTAATTCGAGCTGAGGGTTAGGAAGTTGGGGGTACAGAGTTCAAACATCGCGAAGAAAACTAACATAACAATTATCATACTAACGGCTGTAACGAAAAATAAATAAAGTGTTTGATTTATATTCTGATGTAGTTTAACAGAATTGACTTTGAAAGCTGGATTGTGTATATATTGGTATGGTATTTTAGAGTAAGGATTTTTTTCAAAAAGAAATGGAGAAATCCATTACTATAGTTTTGTGAACCACAAATTTCTAAAAGTTGGGACATGTATGAACTATTTATCATTTCAACTTTTTGACTTAAAGTAAATCATTTGCTGGAAACATTGAACCGAGGCATATTCATATGAATTATGAACCGAGGCATAATTATTCTGAAATCACAAGTTTCTTTCTATTAAGGTGAATGCTTAATGCAAAAGCCAGTAAGGTTGTCATCTATATAGAGTGTTCGGATAAGAAACTTAATTAAGTGCTTACGGAGTAAGTGTTTATCAAACAAACACTTGTTATTTTCATAAATTATTTTGGTGAATTTATTGAAATAAGTTAGAAAGATCCTATGGACATGAGCCAAACATTTTATGTAAATGATTGCTTGCATATTAGTGAAACACCTAGTTTCGATAAGAATTTTGACTTCTCCAGCTTTTGGGGTTTGAAAAGTTGTAGCAATGTGATGGATTTTTGAGTATGATGTGCATATATAGGATTGTGGATTACTAGTTTCCTTGTTTTCAATTAAGCAACTCTTTCTGTTGGCTGATTATATCAGCTCCATCTTTTGCAGGTATATTGTTTGGGGCACCGAAGTTATATTGAGCATAATTGTACAAAACCCAACAAACACGATGTCACTGTTGTTATATGTCCACTTTGTGCTAAAGGGGTTCGCCTAATTCCAGACCAAGATCCAAACATAGTTTGGGAGCATCATGTGAACACAGACTGTGACCCATCAAATTATGAAAAAGCCACAAAGAAGAAAAAATGTCCTGTCCCAGGATGCAGAGAGACCTTAGTATTCTCAAACACAATCAAGTGTAGGGACTGTGAGGTTGACCATTGTTTGAAGCACAGGTTTGGACCTGATCACAAATGTCCTGGACCCAAAAAGTTGGAAACAAGTTTTTCATTTATGAGTCTTTGGAATATGAGTAGTGGTAAAGAAGAGTCAAAACCCAATTTAACTTCAACCACATCATCTAAATGGACGTCAAGCCTTCTTGACTTGGCTTCTAAATTGAGTGGGATAGGACAGAGCAGTGGCAGCGGTAATATTAATAATCAACTGGAGAAGTGTCCACTATGTGATGCTAAGTTTTCCTCGGCCACTAGTTTGGTGGATCATGCGAAAAAAGTTCATCAAAGGAGTGGTGGCAACCAATATGGGGCAAAGAAGGTGTCGATTTCTGCATGTCCCAAGTGCAGTAAAGGTTTTTTGGACCCAGTTTCCCTTGTAGAGCATGTTGAGAGGGATCATGGTGGCTGCTCTTGA
Protein sequence

>MS.gene072318.t1

MGTPEFPDLGKHCSVSDCRLIDFLPFTCDRCNQVYCLGHRSYIEHNCTKPNKHDVTVVICPLCAKGVRLIPDQDPNIVWEHHVNTDCDPSNYEKATKKKKCPVPGCRETLVFSNTIKCRDCEVDHCLKHRFGPDHKCPGPKKLETSFSFMSLWNMSSGKEESKPNLTSTTSSKWTSSLLDLASKLSGIGQSSGSGNINNQLEKCPLCDAKFSSATSLVDHAKKVHQRSGGNQYGAKKVSISACPKCSKGFLDPVSLVEHVERDHGGCS