AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene072334

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072334.t1 MTR_7g092070 98.093 734 14 0 1 734 1 734 0.0 1488
MS.gene072334.t1 MTR_3g029590 64.206 718 221 15 33 731 31 731 0.0 845
MS.gene072334.t1 MTR_1g050438 53.808 604 255 12 33 630 1 586 0.0 568
MS.gene072334.t1 MTR_0728s0020 53.400 603 259 10 33 630 17 602 0.0 568
MS.gene072334.t1 MTR_5g082830 42.647 748 297 24 34 731 18 683 2.77e-163 487
MS.gene072334.t1 MTR_5g071070 41.691 686 302 14 39 678 27 660 7.54e-153 461
MS.gene072334.t1 MTR_3g435590 57.107 394 145 6 33 422 18 391 4.51e-145 433
MS.gene072334.t1 MTR_3g435590 60.377 53 21 0 623 675 416 468 2.53e-12 70.1
MS.gene072334.t1 MTR_1g075890 41.420 676 299 19 44 680 30 647 3.50e-142 432
MS.gene072334.t1 MTR_5g071070 40.952 630 274 14 95 678 1 578 8.67e-134 409
MS.gene072334.t1 MTR_3g435680 50.124 403 143 10 95 495 5 351 3.14e-110 340
MS.gene072334.t1 MTR_3g070880 39.912 456 161 11 45 490 8 360 1.25e-95 306
MS.gene072334.t1 MTR_3g464260 39.615 467 195 9 50 516 28 407 1.80e-94 303
MS.gene072334.t1 MTR_3g464280 33.943 601 245 16 62 661 32 481 1.27e-82 271
MS.gene072334.t1 MTR_6g090380 75.701 107 26 0 260 366 99 205 2.68e-57 200
MS.gene072334.t1 MTR_8g102100 57.229 166 57 2 260 417 77 236 3.65e-56 197
MS.gene072334.t1 MTR_2g090605 69.369 111 34 0 264 374 77 187 1.57e-53 191
MS.gene072334.t1 MTR_3g464270 33.971 418 202 11 263 675 8 356 2.09e-53 188
MS.gene072334.t1 MTR_3g103960 61.029 136 49 2 254 388 43 175 1.94e-52 183
MS.gene072334.t1 MTR_4g078660 66.355 107 36 0 260 366 56 162 2.13e-50 179
MS.gene072334.t1 MTR_3g464290 32.397 463 195 15 243 677 79 451 1.38e-46 172
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072334.t1 AT2G41900 65.834 761 188 22 1 734 1 716 0.0 884
MS.gene072334.t1 AT5G12850 53.748 707 270 19 41 727 36 705 0.0 684
MS.gene072334.t1 AT5G58620 44.328 670 252 18 44 683 11 589 5.22e-162 481
MS.gene072334.t1 AT2G40140 40.311 707 257 20 43 728 29 591 1.59e-143 433
MS.gene072334.t1 AT2G40140 40.311 707 257 20 43 728 29 591 1.59e-143 433
MS.gene072334.t1 AT3G55980 47.586 435 156 9 41 461 24 400 4.89e-123 380
MS.gene072334.t1 AT3G55980 47.586 435 156 9 41 461 91 467 4.37e-122 380
MS.gene072334.t1 AT4G29190 51.389 216 93 4 220 428 36 246 1.23e-58 202
MS.gene072334.t1 AT2G19810 56.604 159 68 1 210 368 25 182 9.93e-57 197
MS.gene072334.t1 AT2G25900 72.477 109 30 0 260 368 86 194 1.05e-56 196
MS.gene072334.t1 AT2G25900 72.477 109 30 0 260 368 86 194 1.05e-56 196
MS.gene072334.t1 AT5G07500 64.463 121 43 0 246 366 34 154 9.72e-55 188
MS.gene072334.t1 AT1G03790 59.859 142 49 3 242 379 64 201 7.36e-52 185
MS.gene072334.t1 AT5G44260 60.156 128 46 2 242 368 42 165 8.83e-49 176

Find 204 sgRNAs with CRISPR-Local

Find 220 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATAATTCTTGGTCAAAA+TGG 0.154209 7.4:+16810345 MS.gene072334:CDS
CTAGTGCTGGCTGTAATCTT+AGG 0.193223 7.4:+16809040 MS.gene072334:CDS
TTATTGCAGGCGGCTTCTTA+TGG 0.247506 7.4:+16810161 MS.gene072334:CDS
CCGTTAGCATCCACGGAATT+AGG 0.259510 7.4:-16808931 None:intergenic
GAAAGTGATTATTTCTTTAT+CGG 0.262167 7.4:+16808789 MS.gene072334:CDS
GTGAAGCTGCTTCTTGCAGC+AGG 0.273866 7.4:+16808901 MS.gene072334:CDS
AACTGAGATCAAAGAGAAAT+TGG 0.283003 7.4:+16810508 MS.gene072334:CDS
TTCTTATTCTCCTCCTTTGT+CGG 0.292786 7.4:+16809083 MS.gene072334:CDS
CGCGTGCTTATTCCCATGAT+TGG 0.294935 7.4:+16809298 MS.gene072334:CDS
AAAACAGTTGAAGTCAGATT+TGG 0.296997 7.4:-16810035 None:intergenic
ACTTTCTCGGGTCCCTTCTT+CGG 0.297219 7.4:-16809356 None:intergenic
CTTTCTCGGGTCCCTTCTTC+GGG 0.310844 7.4:-16809355 None:intergenic
TACAATGGCCGAAGCTCTTC+AGG 0.319804 7.4:-16809555 None:intergenic
ATCCCAGCCTTGCATCTTCC+TGG 0.322304 7.4:+16809771 MS.gene072334:CDS
AACTCCATGCTTGCAGCTGC+TGG 0.324417 7.4:+16810317 MS.gene072334:CDS
ATCTCAGGTGCTGCGCCAGC+TGG 0.340015 7.4:+16810539 MS.gene072334:CDS
CGGTGGATGAGGTTGGATTA+TGG 0.349552 7.4:+16808677 MS.gene072334:CDS
GCAGCCATGAGCATGTTGCC+TGG 0.353518 7.4:+16809642 MS.gene072334:CDS
TGCTGCGCCAGCTGGTTCCT+CGG 0.353578 7.4:+16810547 MS.gene072334:CDS
CTTCTTCGGGCATTCTCCCC+TGG 0.358679 7.4:-16809342 None:intergenic
CTGGCTCAGTCAATAATTCT+TGG 0.360024 7.4:+16810336 MS.gene072334:CDS
ACAGGCATGCCAACTCATTA+AGG 0.364336 7.4:-16809896 None:intergenic
CGGCCATTGTATGTTTCAAC+TGG 0.366588 7.4:+16809567 MS.gene072334:CDS
AAGAGATCATCAAGATTTGA+TGG 0.375352 7.4:-16809978 None:intergenic
CAATTGACTTCAACTTCAAC+AGG 0.377422 7.4:-16809146 None:intergenic
GTAAGGGTGCTTGCCGGCGC+GGG 0.377691 7.4:+16809412 MS.gene072334:CDS
TCAAGATTTGATGGATTCAA+TGG 0.378043 7.4:-16809969 None:intergenic
CTTGAGCCCATTGGAGAGAT+AGG 0.383762 7.4:-16810224 None:intergenic
TTGTTGCTGTTGATCATAAT+CGG 0.386100 7.4:-16809871 None:intergenic
ATTCCGAATGTATTCTTTCA+AGG 0.389840 7.4:+16809263 MS.gene072334:CDS
CTAGACTGAAGATTACTTCC+AGG 0.391284 7.4:-16809789 None:intergenic
GCTCTTCACTGTGCTGCTTC+CGG 0.395253 7.4:+16808853 MS.gene072334:CDS
GAACTCCCTCTTTCTCCTGC+TGG 0.397305 7.4:+16809168 MS.gene072334:CDS
TATCGGATGTTGATATCAAC+AGG 0.399105 7.4:+16808806 MS.gene072334:CDS
AGATGCAAGGCTGGGATGTT+TGG 0.402195 7.4:-16809765 None:intergenic
CTAATTCCGTGGATGCTAAC+GGG 0.402744 7.4:+16808932 MS.gene072334:CDS
TTCTCCCCTGGATGAACAAA+AGG 0.403658 7.4:-16809330 None:intergenic
GAGGAGCTACTTCAAATTGA+TGG 0.405740 7.4:+16809015 MS.gene072334:CDS
GATCATCTTCATTTGAGCTT+GGG 0.407859 7.4:+16810429 MS.gene072334:CDS
ACCGATAGTTAAGTGATTCA+TGG 0.410974 7.4:-16808566 None:intergenic
TGTTGATCATCATTTATTGC+AGG 0.414822 7.4:+16810148 MS.gene072334:CDS
GCCAGCTGGTTCCTCGGGTG+AGG 0.415311 7.4:+16810553 MS.gene072334:CDS
TGTCGGCTTCACCTGAGAAC+GGG 0.415939 7.4:+16809100 MS.gene072334:CDS
TGAAGCTGCTTCTTGCAGCA+GGG 0.417923 7.4:+16808902 MS.gene072334:CDS
TGATTCATGGTGTGGTTTCT+CGG 0.418912 7.4:-16808553 None:intergenic
TTTCACACAACTCTGTTGCT+TGG 0.421951 7.4:+16809736 MS.gene072334:CDS
CAATAATTCTTGGTCAAAAT+GGG 0.422094 7.4:+16810346 MS.gene072334:CDS
GTCTGTTGATCATGCTGTAT+TGG 0.422918 7.4:+16810601 MS.gene072334:CDS
TCTGTTGATCATGCTGTATT+GGG 0.426592 7.4:+16810602 MS.gene072334:CDS
TCTTATGGTGTTCAGCCATC+AGG 0.430030 7.4:+16810176 MS.gene072334:CDS
GCCCAATCCAACTTACCATT+GGG 0.431247 7.4:-16810374 None:intergenic
AAGGGCATTCAGTCCAATCA+TGG 0.433719 7.4:-16809311 None:intergenic
CAGCTGTAGTGATACTTTCT+CGG 0.440024 7.4:-16809369 None:intergenic
GCTGCGCCAGCTGGTTCCTC+GGG 0.442943 7.4:+16810548 MS.gene072334:CDS
GACTGCACCCATGATAAATC+AGG 0.445095 7.4:-16810467 None:intergenic
AATTTCTCTTTGATCTCAGT+TGG 0.445539 7.4:-16810506 None:intergenic
CGTGGAGACATTCTTCCTGA+TGG 0.449642 7.4:-16810191 None:intergenic
ACTCCACCCATGTCACCTTC+TGG 0.450662 7.4:+16809705 MS.gene072334:CDS
TTCACTGTGCTGCTTCCGGT+GGG 0.454176 7.4:+16808857 MS.gene072334:CDS
GGCAAAGAAGCAAACTCTCC+TGG 0.456158 7.4:-16809526 None:intergenic
CCCCAATGGTAAGTTGGATT+GGG 0.458669 7.4:+16810373 MS.gene072334:CDS
CTTCCAGGAAGATGCAAGGC+TGG 0.462334 7.4:-16809774 None:intergenic
TGAGCAAAGGACGCCGTTGA+TGG 0.464569 7.4:+16808735 MS.gene072334:CDS
TCAGGAAGGGATGGATCAAC+AGG 0.466570 7.4:-16809210 None:intergenic
CAAGCACCCTTACGAAAATC+AGG 0.467829 7.4:-16809402 None:intergenic
GACATCGAAGAAGGTGAGCC+AGG 0.468116 7.4:-16809660 None:intergenic
AGATCATCTTCATTTGAGCT+TGG 0.468995 7.4:+16810428 MS.gene072334:CDS
TAGTGCTGGCTGTAATCTTA+GGG 0.470828 7.4:+16809041 MS.gene072334:CDS
TTCAACTTCAACAGGAGATC+CGG 0.470845 7.4:-16809138 None:intergenic
AATTAATATGACGTGGAGAC+AGG 0.471650 7.4:-16809914 None:intergenic
TTGTCGGCTTCACCTGAGAA+CGG 0.475746 7.4:+16809099 MS.gene072334:CDS
AGGACGGTACAAATTGTTCC+AGG 0.478546 7.4:+16809508 MS.gene072334:CDS
AATGAATATGAGCACACAAA+TGG 0.478801 7.4:+16810577 MS.gene072334:CDS
GCGAGGAGCCTGATTTATCA+TGG 0.480265 7.4:+16810459 MS.gene072334:CDS
AGGAGATCCGGTGGTGGAGA+AGG 0.485489 7.4:-16809126 None:intergenic
GGAGAAGGAGACCCGTTCTC+AGG 0.488091 7.4:-16809111 None:intergenic
CTTCACTGTGCTGCTTCCGG+TGG 0.492217 7.4:+16808856 MS.gene072334:CDS
GGTGACATGGGTGGAGTGAA+TGG 0.492460 7.4:-16809699 None:intergenic
GTCAAGCACGTCTTCTGCCA+TGG 0.494988 7.4:+16809611 MS.gene072334:CDS
AAATTGGCAACTTCCATCTC+AGG 0.496278 7.4:+16810524 MS.gene072334:CDS
TGAGCCAGCAGCTGCAAGCA+TGG 0.498255 7.4:-16810321 None:intergenic
CCAGCTGGTTCCTCGGGTGA+GGG 0.498286 7.4:+16810554 MS.gene072334:CDS
AGCTGGCGCAGCACCTGAGA+TGG 0.500158 7.4:-16810537 None:intergenic
AGCCCAATCCAACTTACCAT+TGG 0.500923 7.4:-16810375 None:intergenic
CAATGCTAGAGATATTCATA+TGG 0.504807 7.4:+16809830 MS.gene072334:CDS
CCCACACTCCTGAAGAGCTT+CGG 0.505759 7.4:+16809547 MS.gene072334:CDS
CCAACCTCATCCACCGATGT+AGG 0.509535 7.4:-16808670 None:intergenic
TTGATGGTTGCTGCTACATA+TGG 0.511142 7.4:+16808751 MS.gene072334:CDS
TGTACCGTCCTTGCAGAGAC+GGG 0.511148 7.4:-16809496 None:intergenic
CAGGGGAGAATGCCCGAAGA+AGG 0.515191 7.4:+16809343 MS.gene072334:CDS
GTGGAACCTATCTCTCCAAT+GGG 0.516161 7.4:+16810218 MS.gene072334:CDS
TCAGATCCAGCAGGAGAAAG+AGG 0.517866 7.4:-16809174 None:intergenic
CAAATTGATGGTCCTAGTGC+TGG 0.518193 7.4:+16809027 MS.gene072334:CDS
AGCTGTAGTGATACTTTCTC+GGG 0.519357 7.4:-16809368 None:intergenic
TGAGAATTGTGTGTCGAAGT+TGG 0.520178 7.4:-16808529 None:intergenic
GGACCTTGAAAGAATACATT+CGG 0.520381 7.4:-16809266 None:intergenic
CCCTCACCCGAGGAACCAGC+TGG 0.525483 7.4:-16810554 None:intergenic
GAGATAGGTTCCACGTTTCG+TGG 0.525659 7.4:-16810209 None:intergenic
TCTTTCTTCTCAGATCCAGC+AGG 0.526498 7.4:-16809183 None:intergenic
GACATGTGTGAATATGCTCA+TGG 0.527602 7.4:+16809435 MS.gene072334:CDS
CGTAAGGGTGCTTGCCGGCG+CGG 0.530669 7.4:+16809411 MS.gene072334:CDS
CTATCTCTCCAATGGGCTCA+AGG 0.530752 7.4:+16810225 MS.gene072334:CDS
ATTGACATCCTTGAGCCCAT+TGG 0.533162 7.4:-16810233 None:intergenic
CGGGTCTCCTTCTCCACCAC+CGG 0.535005 7.4:+16809119 MS.gene072334:CDS
TGATCCTACATCGGTGGATG+AGG 0.535909 7.4:+16808666 MS.gene072334:CDS
GAAGCTGCTTCTTGCAGCAG+GGG 0.537195 7.4:+16808903 MS.gene072334:CDS
CCTACATCGGTGGATGAGGT+TGG 0.537476 7.4:+16808670 MS.gene072334:CDS
AAGACAGCTGATTTGTGAGT+CGG 0.538872 7.4:-16810062 None:intergenic
CCTAATTCCGTGGATGCTAA+CGG 0.540668 7.4:+16808931 MS.gene072334:CDS
CTAAGATTACAGCCAGCACT+AGG 0.544045 7.4:-16809039 None:intergenic
TCATTTGAGCTTGGGAACAA+TGG 0.545835 7.4:+16810437 MS.gene072334:CDS
CGTGGAACCTATCTCTCCAA+TGG 0.547113 7.4:+16810217 MS.gene072334:CDS
GGGCTCAAGGATGTCAATGC+TGG 0.547672 7.4:+16810238 MS.gene072334:CDS
GCCGAAGCTCTTCAGGAGTG+TGG 0.548910 7.4:-16809548 None:intergenic
TAGTTAAGTGATTCATGGTG+TGG 0.551522 7.4:-16808561 None:intergenic
AGACGGGTTCTATATTGTGC+AGG 0.553860 7.4:-16809480 None:intergenic
GATGAGGTTGGATTATGGTA+TGG 0.556471 7.4:+16808682 MS.gene072334:CDS
ATTCAATGGCTTCATTCGAC+CGG 0.556611 7.4:-16809955 None:intergenic
ACCATGAATCACTTAACTAT+CGG 0.558236 7.4:+16808565 MS.gene072334:CDS
CCCATGTCACCTTCTGGCAA+TGG 0.558647 7.4:+16809711 MS.gene072334:CDS
TGGGAATAAGCACGCGAACA+AGG 0.559628 7.4:-16809291 None:intergenic
ACATGTGTGAATATGCTCAT+GGG 0.562526 7.4:+16809436 MS.gene072334:CDS
TTCCAGGAAGATGCAAGGCT+GGG 0.563396 7.4:-16809773 None:intergenic
TAAGGGTGCTTGCCGGCGCG+GGG 0.564739 7.4:+16809413 MS.gene072334:CDS
TTGTACCGTCCTTGCAGAGA+CGG 0.564971 7.4:-16809497 None:intergenic
AGCCTAAGCTTCCGCGAGCA+CGG 0.565872 7.4:+16810290 MS.gene072334:CDS
AGCCGTGCTCGCGGAAGCTT+AGG 0.568886 7.4:-16810292 None:intergenic
GACATGACAGACATCGAAGA+AGG 0.569249 7.4:-16809669 None:intergenic
AGGGGAGAATGCCCGAAGAA+GGG 0.570703 7.4:+16809344 MS.gene072334:CDS
GAATAAACAATAACATCTAA+CGG 0.574687 7.4:-16808961 None:intergenic
CATGGCTGCAGCAAAATCCA+TGG 0.577281 7.4:-16809628 None:intergenic
CCCTTACGAAAATCAGGACA+AGG 0.579234 7.4:-16809396 None:intergenic
CTGCTAATAACGACGTGGAA+GGG 0.580572 7.4:+16808623 MS.gene072334:CDS
CAGATCCAGCAGGAGAAAGA+GGG 0.581890 7.4:-16809173 None:intergenic
ACGATCCCCGTTAGCATCCA+CGG 0.582142 7.4:-16808938 None:intergenic
GTATGTTTCAACTGGTTCTG+CGG 0.583036 7.4:+16809575 MS.gene072334:CDS
AGGGCATTCAGTCCAATCAT+GGG 0.584059 7.4:-16809310 None:intergenic
TGAGCCAGGCAACATGCTCA+TGG 0.584222 7.4:-16809646 None:intergenic
GACGTGCTTGACCGAGGTGA+GGG 0.585321 7.4:-16809600 None:intergenic
TTCAACAGGAGATCCGGTGG+TGG 0.585729 7.4:-16809132 None:intergenic
CCGAAGCTCTTCAGGAGTGT+GGG 0.587103 7.4:-16809547 None:intergenic
GCAACAACTCCTTAATGAGT+TGG 0.589263 7.4:+16809887 MS.gene072334:CDS
TCTCCCCTGGATGAACAAAA+GGG 0.590156 7.4:-16809329 None:intergenic
GAAGAGCAGTGCTCTTGTCA+AGG 0.590240 7.4:-16808837 None:intergenic
TTATGGTATGGTCGTCGCAA+GGG 0.590907 7.4:+16808694 MS.gene072334:CDS
GTTCTGCGGTTCCCTCACCT+CGG 0.594015 7.4:+16809589 MS.gene072334:CDS
CGAGGAGCCTGATTTATCAT+GGG 0.594503 7.4:+16810460 MS.gene072334:CDS
ATTATGGTATGGTCGTCGCA+AGG 0.597308 7.4:+16808693 MS.gene072334:CDS
GTGCTCTTGTCAAGGCCACA+AGG 0.598467 7.4:-16808829 None:intergenic
TATTAGCAGCAAGCTCAAGA+AGG 0.599518 7.4:-16808609 None:intergenic
ATCATGCTGTATTGGGAACA+TGG 0.599645 7.4:+16810609 MS.gene072334:CDS
AGACGTGCTTGACCGAGGTG+AGG 0.601319 7.4:-16809601 None:intergenic
GCTCAAATGAAGATGATCTA+CGG 0.601438 7.4:-16810424 None:intergenic
GACGGAGATGAAGACGGCAC+AGG 0.602727 7.4:-16808499 None:intergenic
GCTGCTAATAACGACGTGGA+AGG 0.603136 7.4:+16808622 MS.gene072334:CDS
TTCTCAGGTGAAGCCGACAA+AGG 0.603590 7.4:-16809096 None:intergenic
AAGAATGTCTCCACGAAACG+TGG 0.605224 7.4:+16810199 MS.gene072334:CDS
TCTAACAGTCTTAGCCGCTC+CGG 0.606773 7.4:+16809936 MS.gene072334:CDS
GCCATTGCCAGAAGGTGACA+TGG 0.611555 7.4:-16809712 None:intergenic
CTGTTAGAATTAATATGACG+TGG 0.612704 7.4:-16809921 None:intergenic
ATATAGAACCCGTCTCTGCA+AGG 0.614108 7.4:+16809488 MS.gene072334:CDS
ATTCACACATGTCCCCGCGC+CGG 0.614297 7.4:-16809425 None:intergenic
TGATCATCATTTATTGCAGG+CGG 0.614691 7.4:+16810151 MS.gene072334:CDS
TATGTAGCAGCAACCATCAA+CGG 0.614726 7.4:-16808748 None:intergenic
GTTGATATCAACAGGCCTTG+TGG 0.614945 7.4:+16808814 MS.gene072334:CDS
TGGAGTTAGAGCCGTGCTCG+CGG 0.616438 7.4:-16810301 None:intergenic
AGCAGATGGTCAATGAGCAA+AGG 0.617799 7.4:+16808722 MS.gene072334:CDS
ATATCGAGGAGAAGAACTCT+CGG 0.618533 7.4:-16810006 None:intergenic
AATAAGCACGCGAACAAGGT+CGG 0.619335 7.4:-16809287 None:intergenic
AAGGCTGGGATGTTTGGCTG+AGG 0.620227 7.4:-16809759 None:intergenic
TAATTCCGTGGATGCTAACG+GGG 0.620451 7.4:+16808933 MS.gene072334:CDS
GCTCACAATGCGGATGATGT+TGG 0.621854 7.4:+16810395 MS.gene072334:CDS
TCACTGTGCTGCTTCCGGTG+GGG 0.621976 7.4:+16808858 MS.gene072334:CDS
ATGGGTGGAGTGAATGGTGA+AGG 0.622440 7.4:-16809693 None:intergenic
GATGCAGCTTGATCATCTTG+TGG 0.622855 7.4:+16810640 MS.gene072334:CDS
CCAATCCAACTTACCATTGG+GGG 0.626687 7.4:-16810372 None:intergenic
TTGCCAGAAGGTGACATGGG+TGG 0.627061 7.4:-16809708 None:intergenic
TCAGGTGAAGCCGACAAAGG+AGG 0.632119 7.4:-16809093 None:intergenic
CCCAATCCAACTTACCATTG+GGG 0.638578 7.4:-16810373 None:intergenic
GATAGAGACGGAGATGAAGA+CGG 0.638842 7.4:-16808505 None:intergenic
TCGCAAGGGATCGAAGCAGA+TGG 0.641118 7.4:+16808708 MS.gene072334:CDS
AGAACCCGTCTCTGCAAGGA+CGG 0.642420 7.4:+16809492 MS.gene072334:CDS
TGAAAGGATGTGCTGTGAGT+CGG 0.642861 7.4:+16808465 None:intergenic
AACTTCAACAGGAGATCCGG+TGG 0.644927 7.4:-16809135 None:intergenic
GTCGAAGTTGGAGATAGAGA+CGG 0.650421 7.4:-16808517 None:intergenic
CATGTGTGAATATGCTCATG+GGG 0.652271 7.4:+16809437 MS.gene072334:CDS
GCAGAAGACGTGCTTGACCG+AGG 0.653400 7.4:-16809606 None:intergenic
TTTCACAAGTTCAAGCTTCG+GGG 0.656993 7.4:-16808983 None:intergenic
TGAGCTTGGGAACAATGGCG+AGG 0.658801 7.4:+16810442 MS.gene072334:CDS
TGTGAAATGCCATTGCCAGA+AGG 0.659354 7.4:-16809720 None:intergenic
ATTACTTCCAGGAAGATGCA+AGG 0.661108 7.4:-16809778 None:intergenic
AAGGATGTGCTGTGAGTCGG+AGG 0.661354 7.4:+16808468 None:intergenic
AGGGGCTGATCCTAATTCCG+TGG 0.663243 7.4:+16808921 MS.gene072334:CDS
ATGGCTTCATTCGACCGGAG+CGG 0.667016 7.4:-16809950 None:intergenic
CATATTCATTCCCTCACCCG+AGG 0.676171 7.4:-16810564 None:intergenic
GAACCAGTTGAAACATACAA+TGG 0.685763 7.4:-16809570 None:intergenic
TGAGTATGATCCTACATCGG+TGG 0.686854 7.4:+16808660 MS.gene072334:CDS
AGATTTGGATCAGCATATCG+AGG 0.694701 7.4:-16810020 None:intergenic
GTTGGATTGGGCTCACAATG+CGG 0.696691 7.4:+16810385 MS.gene072334:CDS
GATTGAGTATGATCCTACAT+CGG 0.700321 7.4:+16808657 MS.gene072334:CDS
CCATTGCCAGAAGGTGACAT+GGG 0.719317 7.4:-16809711 None:intergenic
CCTTACGAAAATCAGGACAA+GGG 0.730105 7.4:-16809395 None:intergenic
GCTTGCTGCTAATAACGACG+TGG 0.738667 7.4:+16808618 MS.gene072334:CDS
AGGATGTGCTGTGAGTCGGA+GGG 0.739091 7.4:+16808469 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATAAACAATAACATCTAA+CGG - chr7.4:16808964-16808983 None:intergenic 20.0%
!!! GAAAGTGATTATTTCTTTAT+CGG + chr7.4:16808789-16808808 MS.gene072334:CDS 20.0%
! CAATAATTCTTGGTCAAAAT+GGG + chr7.4:16810346-16810365 MS.gene072334:CDS 25.0%
! GAAGAAAAATTTGTATTCAC+TGG - chr7.4:16810122-16810141 None:intergenic 25.0%
! TCAATAATTCTTGGTCAAAA+TGG + chr7.4:16810345-16810364 MS.gene072334:CDS 25.0%
AAAACAGTTGAAGTCAGATT+TGG - chr7.4:16810038-16810057 None:intergenic 30.0%
AACTGAGATCAAAGAGAAAT+TGG + chr7.4:16810508-16810527 MS.gene072334:CDS 30.0%
AAGAGATCATCAAGATTTGA+TGG - chr7.4:16809981-16810000 None:intergenic 30.0%
AATGAATATGAGCACACAAA+TGG + chr7.4:16810577-16810596 MS.gene072334:CDS 30.0%
AATTTCTCTTTGATCTCAGT+TGG - chr7.4:16810509-16810528 None:intergenic 30.0%
ACCATGAATCACTTAACTAT+CGG + chr7.4:16808565-16808584 MS.gene072334:CDS 30.0%
ATTCCGAATGTATTCTTTCA+AGG + chr7.4:16809263-16809282 MS.gene072334:CDS 30.0%
CAATGCTAGAGATATTCATA+TGG + chr7.4:16809830-16809849 MS.gene072334:CDS 30.0%
CTGTTAGAATTAATATGACG+TGG - chr7.4:16809924-16809943 None:intergenic 30.0%
TGTTGATCATCATTTATTGC+AGG + chr7.4:16810148-16810167 MS.gene072334:CDS 30.0%
! TTGTTGCTGTTGATCATAAT+CGG - chr7.4:16809874-16809893 None:intergenic 30.0%
! TTTTTCACAAGTTCAAGCTT+CGG - chr7.4:16808988-16809007 None:intergenic 30.0%
!! TCAAGATTTGATGGATTCAA+TGG - chr7.4:16809972-16809991 None:intergenic 30.0%
!!! TATATGCTGTTTTTGATGTC+AGG - chr7.4:16809231-16809250 None:intergenic 30.0%
AATTAATATGACGTGGAGAC+AGG - chr7.4:16809917-16809936 None:intergenic 35.0%
ACATGTGTGAATATGCTCAT+GGG + chr7.4:16809436-16809455 MS.gene072334:CDS 35.0%
ACCGATAGTTAAGTGATTCA+TGG - chr7.4:16808569-16808588 None:intergenic 35.0%
ACTTGTGAAAAACAGTCTTG+AGG + chr7.4:16808996-16809015 MS.gene072334:CDS 35.0%
AGATCATCTTCATTTGAGCT+TGG + chr7.4:16810428-16810447 MS.gene072334:CDS 35.0%
GAACCAGTTGAAACATACAA+TGG - chr7.4:16809573-16809592 None:intergenic 35.0%
GATCATCTTCATTTGAGCTT+GGG + chr7.4:16810429-16810448 MS.gene072334:CDS 35.0%
GATTGAGTATGATCCTACAT+CGG + chr7.4:16808657-16808676 MS.gene072334:CDS 35.0%
GCTCAAATGAAGATGATCTA+CGG - chr7.4:16810427-16810446 None:intergenic 35.0%
GGACCTTGAAAGAATACATT+CGG - chr7.4:16809269-16809288 None:intergenic 35.0%
TAGTTAAGTGATTCATGGTG+TGG - chr7.4:16808564-16808583 None:intergenic 35.0%
TATCGGATGTTGATATCAAC+AGG + chr7.4:16808806-16808825 MS.gene072334:CDS 35.0%
TCTGTTGATCATGCTGTATT+GGG + chr7.4:16810602-16810621 MS.gene072334:CDS 35.0%
TGATCATCATTTATTGCAGG+CGG + chr7.4:16810151-16810170 MS.gene072334:CDS 35.0%
TTCTTATTCTCCTCCTTTGT+CGG + chr7.4:16809083-16809102 MS.gene072334:CDS 35.0%
! CAATTGACTTCAACTTCAAC+AGG - chr7.4:16809149-16809168 None:intergenic 35.0%
! TTTTCACAAGTTCAAGCTTC+GGG - chr7.4:16808987-16809006 None:intergenic 35.0%
AAATTGGCAACTTCCATCTC+AGG + chr7.4:16810524-16810543 MS.gene072334:CDS 40.0%
AGATTTGGATCAGCATATCG+AGG - chr7.4:16810023-16810042 None:intergenic 40.0%
AGCTGTAGTGATACTTTCTC+GGG - chr7.4:16809371-16809390 None:intergenic 40.0%
ATATCGAGGAGAAGAACTCT+CGG - chr7.4:16810009-16810028 None:intergenic 40.0%
ATCATGCTGTATTGGGAACA+TGG + chr7.4:16810609-16810628 MS.gene072334:CDS 40.0%
ATTACTTCCAGGAAGATGCA+AGG - chr7.4:16809781-16809800 None:intergenic 40.0%
ATTCAATGGCTTCATTCGAC+CGG - chr7.4:16809958-16809977 None:intergenic 40.0%
CAGCTGTAGTGATACTTTCT+CGG - chr7.4:16809372-16809391 None:intergenic 40.0%
CATGTGTGAATATGCTCATG+GGG + chr7.4:16809437-16809456 MS.gene072334:CDS 40.0%
CCTTACGAAAATCAGGACAA+GGG - chr7.4:16809398-16809417 None:intergenic 40.0%
CTAGACTGAAGATTACTTCC+AGG - chr7.4:16809792-16809811 None:intergenic 40.0%
CTGGCTCAGTCAATAATTCT+TGG + chr7.4:16810336-16810355 MS.gene072334:CDS 40.0%
GACATGTGTGAATATGCTCA+TGG + chr7.4:16809435-16809454 MS.gene072334:CDS 40.0%
GAGGAGCTACTTCAAATTGA+TGG + chr7.4:16809015-16809034 MS.gene072334:CDS 40.0%
GATGAGGTTGGATTATGGTA+TGG + chr7.4:16808682-16808701 MS.gene072334:CDS 40.0%
GCAACAACTCCTTAATGAGT+TGG + chr7.4:16809887-16809906 MS.gene072334:CDS 40.0%
GTCTGTTGATCATGCTGTAT+TGG + chr7.4:16810601-16810620 MS.gene072334:CDS 40.0%
TATGTAGCAGCAACCATCAA+CGG - chr7.4:16808751-16808770 None:intergenic 40.0%
TATTAGCAGCAAGCTCAAGA+AGG - chr7.4:16808612-16808631 None:intergenic 40.0%
TCATTTGAGCTTGGGAACAA+TGG + chr7.4:16810437-16810456 MS.gene072334:CDS 40.0%
TGAGAATTGTGTGTCGAAGT+TGG - chr7.4:16808532-16808551 None:intergenic 40.0%
TGATTCATGGTGTGGTTTCT+CGG - chr7.4:16808556-16808575 None:intergenic 40.0%
TTCAACTTCAACAGGAGATC+CGG - chr7.4:16809141-16809160 None:intergenic 40.0%
TTTCACAAGTTCAAGCTTCG+GGG - chr7.4:16808986-16809005 None:intergenic 40.0%
TTTCACACAACTCTGTTGCT+TGG + chr7.4:16809736-16809755 MS.gene072334:CDS 40.0%
! AATGCCCTTTTGTTCATCCA+GGG + chr7.4:16809325-16809344 MS.gene072334:CDS 40.0%
! CCTTGTCCTGATTTTCGTAA+GGG + chr7.4:16809396-16809415 MS.gene072334:CDS 40.0%
! TTGATGGTTGCTGCTACATA+TGG + chr7.4:16808751-16808770 MS.gene072334:CDS 40.0%
! TTTTTGATGTCAGGAAGGGA+TGG - chr7.4:16809222-16809241 None:intergenic 40.0%
!! AAGACAGCTGATTTGTGAGT+CGG - chr7.4:16810065-16810084 None:intergenic 40.0%
!! GTATGTTTCAACTGGTTCTG+CGG + chr7.4:16809575-16809594 MS.gene072334:CDS 40.0%
!! TAGTGCTGGCTGTAATCTTA+GGG + chr7.4:16809041-16809060 MS.gene072334:CDS 40.0%
!!! GCTGTTTTTGATGTCAGGAA+GGG - chr7.4:16809226-16809245 None:intergenic 40.0%
!!! TGCTGTTTTTGATGTCAGGA+AGG - chr7.4:16809227-16809246 None:intergenic 40.0%
AAGAATGTCTCCACGAAACG+TGG + chr7.4:16810199-16810218 MS.gene072334:CDS 45.0%
AATAAGCACGCGAACAAGGT+CGG - chr7.4:16809290-16809309 None:intergenic 45.0%
ACAGGCATGCCAACTCATTA+AGG - chr7.4:16809899-16809918 None:intergenic 45.0%
AGCAGATGGTCAATGAGCAA+AGG + chr7.4:16808722-16808741 MS.gene072334:CDS 45.0%
AGCCCAATCCAACTTACCAT+TGG - chr7.4:16810378-16810397 None:intergenic 45.0%
AGGACGGTACAAATTGTTCC+AGG + chr7.4:16809508-16809527 MS.gene072334:CDS 45.0%
ATATAGAACCCGTCTCTGCA+AGG + chr7.4:16809488-16809507 MS.gene072334:CDS 45.0%
ATTATGGTATGGTCGTCGCA+AGG + chr7.4:16808693-16808712 MS.gene072334:CDS 45.0%
ATTGACATCCTTGAGCCCAT+TGG - chr7.4:16810236-16810255 None:intergenic 45.0%
CAAGCACCCTTACGAAAATC+AGG - chr7.4:16809405-16809424 None:intergenic 45.0%
CCAATCCAACTTACCATTGG+GGG - chr7.4:16810375-16810394 None:intergenic 45.0%
CCCAATCCAACTTACCATTG+GGG - chr7.4:16810376-16810395 None:intergenic 45.0%
CCCTTACGAAAATCAGGACA+AGG - chr7.4:16809399-16809418 None:intergenic 45.0%
CCTAATTCCGTGGATGCTAA+CGG + chr7.4:16808931-16808950 MS.gene072334:CDS 45.0%
CGAGGAGCCTGATTTATCAT+GGG + chr7.4:16810460-16810479 MS.gene072334:CDS 45.0%
CGGCCATTGTATGTTTCAAC+TGG + chr7.4:16809567-16809586 MS.gene072334:CDS 45.0%
CTAAGATTACAGCCAGCACT+AGG - chr7.4:16809042-16809061 None:intergenic 45.0%
CTAATTCCGTGGATGCTAAC+GGG + chr7.4:16808932-16808951 MS.gene072334:CDS 45.0%
CTGCTAATAACGACGTGGAA+GGG + chr7.4:16808623-16808642 MS.gene072334:CDS 45.0%
GACATGACAGACATCGAAGA+AGG - chr7.4:16809672-16809691 None:intergenic 45.0%
GACTGCACCCATGATAAATC+AGG - chr7.4:16810470-16810489 None:intergenic 45.0%
GATAGAGACGGAGATGAAGA+CGG - chr7.4:16808508-16808527 None:intergenic 45.0%
GATGCAGCTTGATCATCTTG+TGG + chr7.4:16810640-16810659 MS.gene072334:CDS 45.0%
GCCCAATCCAACTTACCATT+GGG - chr7.4:16810377-16810396 None:intergenic 45.0%
GTCGAAGTTGGAGATAGAGA+CGG - chr7.4:16808520-16808539 None:intergenic 45.0%
GTGGAACCTATCTCTCCAAT+GGG + chr7.4:16810218-16810237 MS.gene072334:CDS 45.0%
GTTGATATCAACAGGCCTTG+TGG + chr7.4:16808814-16808833 MS.gene072334:CDS 45.0%
TAATTCCGTGGATGCTAACG+GGG + chr7.4:16808933-16808952 MS.gene072334:CDS 45.0%
TCAAAATGGGAATCCCCCAA+TGG + chr7.4:16810359-16810378 MS.gene072334:CDS 45.0%
TCTCCCCTGGATGAACAAAA+GGG - chr7.4:16809332-16809351 None:intergenic 45.0%
TCTTATGGTGTTCAGCCATC+AGG + chr7.4:16810176-16810195 MS.gene072334:CDS 45.0%
TCTTTCTTCTCAGATCCAGC+AGG - chr7.4:16809186-16809205 None:intergenic 45.0%
TGAGTATGATCCTACATCGG+TGG + chr7.4:16808660-16808679 MS.gene072334:CDS 45.0%
TGTGAAATGCCATTGCCAGA+AGG - chr7.4:16809723-16809742 None:intergenic 45.0%
TTATGGTATGGTCGTCGCAA+GGG + chr7.4:16808694-16808713 MS.gene072334:CDS 45.0%
TTATTGCAGGCGGCTTCTTA+TGG + chr7.4:16810161-16810180 MS.gene072334:CDS 45.0%
TTCTCCCCTGGATGAACAAA+AGG - chr7.4:16809333-16809352 None:intergenic 45.0%
! AGACGGGTTCTATATTGTGC+AGG - chr7.4:16809483-16809502 None:intergenic 45.0%
! AGGGCATTCAGTCCAATCAT+GGG - chr7.4:16809313-16809332 None:intergenic 45.0%
! ATGCCCTTTTGTTCATCCAG+GGG + chr7.4:16809326-16809345 MS.gene072334:CDS 45.0%
! CAAATTGATGGTCCTAGTGC+TGG + chr7.4:16809027-16809046 MS.gene072334:CDS 45.0%
! CCCCAATGGTAAGTTGGATT+GGG + chr7.4:16810373-16810392 MS.gene072334:CDS 45.0%
! CCCTTGTCCTGATTTTCGTA+AGG + chr7.4:16809395-16809414 MS.gene072334:CDS 45.0%
! GAATGCCCTTTTGTTCATCC+AGG + chr7.4:16809324-16809343 MS.gene072334:CDS 45.0%
!! AAGGGCATTCAGTCCAATCA+TGG - chr7.4:16809314-16809333 None:intergenic 45.0%
!! CTAGTGCTGGCTGTAATCTT+AGG + chr7.4:16809040-16809059 MS.gene072334:CDS 45.0%
!!! ATTTTCGTAAGGGTGCTTGC+CGG + chr7.4:16809406-16809425 MS.gene072334:CDS 45.0%
AACTTCAACAGGAGATCCGG+TGG - chr7.4:16809138-16809157 None:intergenic 50.0%
ACTTTCTCGGGTCCCTTCTT+CGG - chr7.4:16809359-16809378 None:intergenic 50.0%
AGATGCAAGGCTGGGATGTT+TGG - chr7.4:16809768-16809787 None:intergenic 50.0%
ATGGGTGGAGTGAATGGTGA+AGG - chr7.4:16809696-16809715 None:intergenic 50.0%
CAGATCCAGCAGGAGAAAGA+GGG - chr7.4:16809176-16809195 None:intergenic 50.0%
CATATTCATTCCCTCACCCG+AGG - chr7.4:16810567-16810586 None:intergenic 50.0%
CATGGCTGCAGCAAAATCCA+TGG - chr7.4:16809631-16809650 None:intergenic 50.0%
CCATTGCCAGAAGGTGACAT+GGG - chr7.4:16809714-16809733 None:intergenic 50.0%
CCGTTAGCATCCACGGAATT+AGG - chr7.4:16808934-16808953 None:intergenic 50.0%
CGCGTGCTTATTCCCATGAT+TGG + chr7.4:16809298-16809317 MS.gene072334:CDS 50.0%
CGGTGGATGAGGTTGGATTA+TGG + chr7.4:16808677-16808696 MS.gene072334:CDS 50.0%
CGTGGAACCTATCTCTCCAA+TGG + chr7.4:16810217-16810236 MS.gene072334:CDS 50.0%
CGTGGAGACATTCTTCCTGA+TGG - chr7.4:16810194-16810213 None:intergenic 50.0%
CTTGAGCCCATTGGAGAGAT+AGG - chr7.4:16810227-16810246 None:intergenic 50.0%
GAAGAGCAGTGCTCTTGTCA+AGG - chr7.4:16808840-16808859 None:intergenic 50.0%
GAGATAGGTTCCACGTTTCG+TGG - chr7.4:16810212-16810231 None:intergenic 50.0%
GCGAGGAGCCTGATTTATCA+TGG + chr7.4:16810459-16810478 MS.gene072334:CDS 50.0%
GCTCACAATGCGGATGATGT+TGG + chr7.4:16810395-16810414 MS.gene072334:CDS 50.0%
GCTGCTAATAACGACGTGGA+AGG + chr7.4:16808622-16808641 MS.gene072334:CDS 50.0%
GGAATCCCCCAATGGTAAGT+TGG + chr7.4:16810367-16810386 MS.gene072334:CDS 50.0%
GGCAAAGAAGCAAACTCTCC+TGG - chr7.4:16809529-16809548 None:intergenic 50.0%
TACAATGGCCGAAGCTCTTC+AGG - chr7.4:16809558-16809577 None:intergenic 50.0%
TCAGATCCAGCAGGAGAAAG+AGG - chr7.4:16809177-16809196 None:intergenic 50.0%
TCAGGAAGGGATGGATCAAC+AGG - chr7.4:16809213-16809232 None:intergenic 50.0%
TCTAACAGTCTTAGCCGCTC+CGG + chr7.4:16809936-16809955 MS.gene072334:CDS 50.0%
TGAAGCTGCTTCTTGCAGCA+GGG + chr7.4:16808902-16808921 MS.gene072334:CDS 50.0%
TGATCCTACATCGGTGGATG+AGG + chr7.4:16808666-16808685 MS.gene072334:CDS 50.0%
TGGGAATAAGCACGCGAACA+AGG - chr7.4:16809294-16809313 None:intergenic 50.0%
TTCCAGGAAGATGCAAGGCT+GGG - chr7.4:16809776-16809795 None:intergenic 50.0%
TTCTCAGGTGAAGCCGACAA+AGG - chr7.4:16809099-16809118 None:intergenic 50.0%
TTGTACCGTCCTTGCAGAGA+CGG - chr7.4:16809500-16809519 None:intergenic 50.0%
! AACAGCATTTTCAGCCCCAC+CGG - chr7.4:16808875-16808894 None:intergenic 50.0%
! CCCCCAATGGTAAGTTGGAT+TGG + chr7.4:16810372-16810391 MS.gene072334:CDS 50.0%
! CTATCTCTCCAATGGGCTCA+AGG + chr7.4:16810225-16810244 MS.gene072334:CDS 50.0%
! GCTTGCTGCTAATAACGACG+TGG + chr7.4:16808618-16808637 MS.gene072334:CDS 50.0%
! GTTGGATTGGGCTCACAATG+CGG + chr7.4:16810385-16810404 MS.gene072334:CDS 50.0%
!! TTGTCGGCTTCACCTGAGAA+CGG + chr7.4:16809099-16809118 MS.gene072334:CDS 50.0%
AACTCCATGCTTGCAGCTGC+TGG + chr7.4:16810317-16810336 MS.gene072334:CDS 55.0%
AAGGCTGGGATGTTTGGCTG+AGG - chr7.4:16809762-16809781 None:intergenic 55.0%
ACGATCCCCGTTAGCATCCA+CGG - chr7.4:16808941-16808960 None:intergenic 55.0%
ACTCCACCCATGTCACCTTC+TGG + chr7.4:16809705-16809724 MS.gene072334:CDS 55.0%
AGAACCCGTCTCTGCAAGGA+CGG + chr7.4:16809492-16809511 MS.gene072334:CDS 55.0%
AGGGGAGAATGCCCGAAGAA+GGG + chr7.4:16809344-16809363 MS.gene072334:CDS 55.0%
AGGGGCTGATCCTAATTCCG+TGG + chr7.4:16808921-16808940 MS.gene072334:CDS 55.0%
ATCCCAGCCTTGCATCTTCC+TGG + chr7.4:16809771-16809790 MS.gene072334:CDS 55.0%
ATGGCTTCATTCGACCGGAG+CGG - chr7.4:16809953-16809972 None:intergenic 55.0%
CCAACCTCATCCACCGATGT+AGG - chr7.4:16808673-16808692 None:intergenic 55.0%
CCCACACTCCTGAAGAGCTT+CGG + chr7.4:16809547-16809566 MS.gene072334:CDS 55.0%
CCCATGTCACCTTCTGGCAA+TGG + chr7.4:16809711-16809730 MS.gene072334:CDS 55.0%
CCTACATCGGTGGATGAGGT+TGG + chr7.4:16808670-16808689 MS.gene072334:CDS 55.0%
CTTCCAGGAAGATGCAAGGC+TGG - chr7.4:16809777-16809796 None:intergenic 55.0%
CTTTCTCGGGTCCCTTCTTC+GGG - chr7.4:16809358-16809377 None:intergenic 55.0%
GAACTCCCTCTTTCTCCTGC+TGG + chr7.4:16809168-16809187 MS.gene072334:CDS 55.0%
GAAGCTGCTTCTTGCAGCAG+GGG + chr7.4:16808903-16808922 MS.gene072334:CDS 55.0%
GACATCGAAGAAGGTGAGCC+AGG - chr7.4:16809663-16809682 None:intergenic 55.0%
GCCATTGCCAGAAGGTGACA+TGG - chr7.4:16809715-16809734 None:intergenic 55.0%
GGGCTCAAGGATGTCAATGC+TGG + chr7.4:16810238-16810257 MS.gene072334:CDS 55.0%
GGTGACATGGGTGGAGTGAA+TGG - chr7.4:16809702-16809721 None:intergenic 55.0%
GTCAAGCACGTCTTCTGCCA+TGG + chr7.4:16809611-16809630 MS.gene072334:CDS 55.0%
GTGAAGCTGCTTCTTGCAGC+AGG + chr7.4:16808901-16808920 MS.gene072334:CDS 55.0%
GTGCTCTTGTCAAGGCCACA+AGG - chr7.4:16808832-16808851 None:intergenic 55.0%
TCAGGTGAAGCCGACAAAGG+AGG - chr7.4:16809096-16809115 None:intergenic 55.0%
TCGCAAGGGATCGAAGCAGA+TGG + chr7.4:16808708-16808727 MS.gene072334:CDS 55.0%
TGAGCAAAGGACGCCGTTGA+TGG + chr7.4:16808735-16808754 MS.gene072334:CDS 55.0%
TGAGCCAGGCAACATGCTCA+TGG - chr7.4:16809649-16809668 None:intergenic 55.0%
TGAGCTTGGGAACAATGGCG+AGG + chr7.4:16810442-16810461 MS.gene072334:CDS 55.0%
TGTACCGTCCTTGCAGAGAC+GGG - chr7.4:16809499-16809518 None:intergenic 55.0%
TTCAACAGGAGATCCGGTGG+TGG - chr7.4:16809135-16809154 None:intergenic 55.0%
TTGCCAGAAGGTGACATGGG+TGG - chr7.4:16809711-16809730 None:intergenic 55.0%
! CCGAAGCTCTTCAGGAGTGT+GGG - chr7.4:16809550-16809569 None:intergenic 55.0%
!! GCTCTTCACTGTGCTGCTTC+CGG + chr7.4:16808853-16808872 MS.gene072334:CDS 55.0%
!! TGTCGGCTTCACCTGAGAAC+GGG + chr7.4:16809100-16809119 MS.gene072334:CDS 55.0%
!! TTCACTGTGCTGCTTCCGGT+GGG + chr7.4:16808857-16808876 MS.gene072334:CDS 55.0%
!!! CTCATGGGGTTTTCGAGTGC+TGG + chr7.4:16809451-16809470 MS.gene072334:CDS 55.0%
AGACGTGCTTGACCGAGGTG+AGG - chr7.4:16809604-16809623 None:intergenic 60.0%
AGCCTAAGCTTCCGCGAGCA+CGG + chr7.4:16810290-16810309 MS.gene072334:CDS 60.0%
ATTCACACATGTCCCCGCGC+CGG - chr7.4:16809428-16809447 None:intergenic 60.0%
CAGGGGAGAATGCCCGAAGA+AGG + chr7.4:16809343-16809362 MS.gene072334:CDS 60.0%
CTTCTTCGGGCATTCTCCCC+TGG - chr7.4:16809345-16809364 None:intergenic 60.0%
GACGGAGATGAAGACGGCAC+AGG - chr7.4:16808502-16808521 None:intergenic 60.0%
GACGTGCTTGACCGAGGTGA+GGG - chr7.4:16809603-16809622 None:intergenic 60.0%
GCAGAAGACGTGCTTGACCG+AGG - chr7.4:16809609-16809628 None:intergenic 60.0%
GCAGCCATGAGCATGTTGCC+TGG + chr7.4:16809642-16809661 MS.gene072334:CDS 60.0%
GCCGAAGCTCTTCAGGAGTG+TGG - chr7.4:16809551-16809570 None:intergenic 60.0%
GGAGAAGGAGACCCGTTCTC+AGG - chr7.4:16809114-16809133 None:intergenic 60.0%
GTTCTGCGGTTCCCTCACCT+CGG + chr7.4:16809589-16809608 MS.gene072334:CDS 60.0%
TGAGCCAGCAGCTGCAAGCA+TGG - chr7.4:16810324-16810343 None:intergenic 60.0%
TGGAGTTAGAGCCGTGCTCG+CGG - chr7.4:16810304-16810323 None:intergenic 60.0%
!! AGGAGATCCGGTGGTGGAGA+AGG - chr7.4:16809129-16809148 None:intergenic 60.0%
!! CTTCACTGTGCTGCTTCCGG+TGG + chr7.4:16808856-16808875 MS.gene072334:CDS 60.0%
!! TCACTGTGCTGCTTCCGGTG+GGG + chr7.4:16808858-16808877 MS.gene072334:CDS 60.0%
AGCCGTGCTCGCGGAAGCTT+AGG - chr7.4:16810295-16810314 None:intergenic 65.0%
AGCTGGCGCAGCACCTGAGA+TGG - chr7.4:16810540-16810559 None:intergenic 65.0%
CGGGTCTCCTTCTCCACCAC+CGG + chr7.4:16809119-16809138 MS.gene072334:CDS 65.0%
! ATCTCAGGTGCTGCGCCAGC+TGG + chr7.4:16810539-16810558 MS.gene072334:CDS 65.0%
! CCAGCTGGTTCCTCGGGTGA+GGG + chr7.4:16810554-16810573 MS.gene072334:CDS 65.0%
! TGCTGCGCCAGCTGGTTCCT+CGG + chr7.4:16810547-16810566 MS.gene072334:CDS 65.0%
CCCTCACCCGAGGAACCAGC+TGG - chr7.4:16810557-16810576 None:intergenic 70.0%
! GCCAGCTGGTTCCTCGGGTG+AGG + chr7.4:16810553-16810572 MS.gene072334:CDS 70.0%
! GCTGCGCCAGCTGGTTCCTC+GGG + chr7.4:16810548-16810567 MS.gene072334:CDS 70.0%
!! CGTAAGGGTGCTTGCCGGCG+CGG + chr7.4:16809411-16809430 MS.gene072334:CDS 70.0%
!! GTAAGGGTGCTTGCCGGCGC+GGG + chr7.4:16809412-16809431 MS.gene072334:CDS 70.0%
!! TAAGGGTGCTTGCCGGCGCG+GGG + chr7.4:16809413-16809432 MS.gene072334:CDS 70.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 16808472 16810676 16808472 ID=MS.gene072334
chr7.4 mRNA 16808472 16810676 16808472 ID=MS.gene072334.t1;Parent=MS.gene072334
chr7.4 exon 16808472 16810676 16808472 ID=MS.gene072334.t1.exon1;Parent=MS.gene072334.t1
chr7.4 CDS 16808472 16810676 16808472 ID=cds.MS.gene072334.t1;Parent=MS.gene072334.t1
Gene Sequence

>MS.gene072334

ATGTGCTGTGAGTCGGAGGGTTTAAAGCCTGTGCCGTCTTCATCTCCGTCTCTATCTCCAACTTCGACACACAATTCTCAACCGAGAAACCACACCATGAATCACTTAACTATCGGTACTGAAGATTCTTTTGCTAGCCTTCTTGAGCTTGCTGCTAATAACGACGTGGAAGGGTTCAAACGATTGATTGAGTATGATCCTACATCGGTGGATGAGGTTGGATTATGGTATGGTCGTCGCAAGGGATCGAAGCAGATGGTCAATGAGCAAAGGACGCCGTTGATGGTTGCTGCTACATATGGTAGCATTGATGTTATGAAAGTGATTATTTCTTTATCGGATGTTGATATCAACAGGCCTTGTGGCCTTGACAAGAGCACTGCTCTTCACTGTGCTGCTTCCGGTGGGGCTGAAAATGCTGTTGATGCTGTGAAGCTGCTTCTTGCAGCAGGGGCTGATCCTAATTCCGTGGATGCTAACGGGGATCGTCCGTTAGATGTTATTGTTTATTCCCCGAAGCTTGAACTTGTGAAAAACAGTCTTGAGGAGCTACTTCAAATTGATGGTCCTAGTGCTGGCTGTAATCTTAGGGTGATTACAAACTCGCTTAATTCTTATTCTCCTCCTTTGTCGGCTTCACCTGAGAACGGGTCTCCTTCTCCACCACCGGATCTCCTGTTGAAGTTGAAGTCAATTGAACTCCCTCTTTCTCCTGCTGGATCTGAGAAGAAAGAATATCCTGTTGATCCATCCCTTCCTGACATCAAAAACAGCATATACTCAACTGATGAATTCCGAATGTATTCTTTCAAGGTCCGACCTTGTTCGCGTGCTTATTCCCATGATTGGACTGAATGCCCTTTTGTTCATCCAGGGGAGAATGCCCGAAGAAGGGACCCGAGAAAGTATCACTACAGCTGTGTCCCTTGTCCTGATTTTCGTAAGGGTGCTTGCCGGCGCGGGGACATGTGTGAATATGCTCATGGGGTTTTCGAGTGCTGGCTGCATCCTGCACAATATAGAACCCGTCTCTGCAAGGACGGTACAAATTGTTCCAGGAGAGTTTGCTTCTTTGCCCACACTCCTGAAGAGCTTCGGCCATTGTATGTTTCAACTGGTTCTGCGGTTCCCTCACCTCGGTCAAGCACGTCTTCTGCCATGGATTTTGCTGCAGCCATGAGCATGTTGCCTGGCTCACCTTCTTCGATGTCTGTCATGTCTCCTTCACCATTCACTCCACCCATGTCACCTTCTGGCAATGGCATTTCACACAACTCTGTTGCTTGGCCTCAGCCAAACATCCCAGCCTTGCATCTTCCTGGAAGTAATCTTCAGTCTAGTCGTTTGAGATCTTCTCTCAATGCTAGAGATATTCATATGGATGATTTTGAGTTGTTATCCGATTATGATCAACAGCAACAACTCCTTAATGAGTTGGCATGCCTGTCTCCACGTCATATTAATTCTAACAGTCTTAGCCGCTCCGGTCGAATGAAGCCATTGAATCCATCAAATCTTGATGATCTCTTTTCTGCCGAGAGTTCTTCTCCTCGATATGCTGATCCAAATCTGACTTCAACTGTTTTTTCTCCGACTCACAAATCAGCTGTCTTTAATCAGTTTCAGCAGCAGCAGAACATGTTGTCACCAGTGAATACAAATTTTTCTTCTAAAAATGTTGATCATCATTTATTGCAGGCGGCTTCTTATGGTGTTCAGCCATCAGGAAGAATGTCTCCACGAAACGTGGAACCTATCTCTCCAATGGGCTCAAGGATGTCAATGCTGGCACAACGCGACAAGCAGCAACAATTTCGTAGCCTAAGCTTCCGCGAGCACGGCTCTAACTCCATGCTTGCAGCTGCTGGCTCAGTCAATAATTCTTGGTCAAAATGGGAATCCCCCAATGGTAAGTTGGATTGGGCTCACAATGCGGATGATGTTGGTAAACTCCGTAGATCATCTTCATTTGAGCTTGGGAACAATGGCGAGGAGCCTGATTTATCATGGGTGCAGTCACTTGTCAAAGAATCTCCAACTGAGATCAAAGAGAAATTGGCAACTTCCATCTCAGGTGCTGCGCCAGCTGGTTCCTCGGGTGAGGGAATGAATATGAGCACACAAATGGAGTCTGTTGATCATGCTGTATTGGGAACATGGCTTGAACAGATGCAGCTTGATCATCTTGTGGCTCAGCAAAACTGA
Protein sequence

>MS.gene072334.t1

MCCESEGLKPVPSSSPSLSPTSTHNSQPRNHTMNHLTIGTEDSFASLLELAANNDVEGFKRLIEYDPTSVDEVGLWYGRRKGSKQMVNEQRTPLMVAATYGSIDVMKVIISLSDVDINRPCGLDKSTALHCAASGGAENAVDAVKLLLAAGADPNSVDANGDRPLDVIVYSPKLELVKNSLEELLQIDGPSAGCNLRVITNSLNSYSPPLSASPENGSPSPPPDLLLKLKSIELPLSPAGSEKKEYPVDPSLPDIKNSIYSTDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVPCPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTNCSRRVCFFAHTPEELRPLYVSTGSAVPSPRSSTSSAMDFAAAMSMLPGSPSSMSVMSPSPFTPPMSPSGNGISHNSVAWPQPNIPALHLPGSNLQSSRLRSSLNARDIHMDDFELLSDYDQQQQLLNELACLSPRHINSNSLSRSGRMKPLNPSNLDDLFSAESSSPRYADPNLTSTVFSPTHKSAVFNQFQQQQNMLSPVNTNFSSKNVDHHLLQAASYGVQPSGRMSPRNVEPISPMGSRMSMLAQRDKQQQFRSLSFREHGSNSMLAAAGSVNNSWSKWESPNGKLDWAHNADDVGKLRRSSSFELGNNGEEPDLSWVQSLVKESPTEIKEKLATSISGAAPAGSSGEGMNMSTQMESVDHAVLGTWLEQMQLDHLVAQQN