AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene072392

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072392.t1 MTR_7g093010 91.033 368 22 3 1 366 1 359 0.0 662
MS.gene072392.t1 MTR_1g053800 41.441 333 157 9 35 356 9 314 4.10e-57 189
MS.gene072392.t1 MTR_1g053835 43.275 171 87 3 191 352 220 389 8.71e-31 121
MS.gene072392.t1 MTR_7g093030 44.604 139 75 1 222 358 212 350 5.08e-27 110
MS.gene072392.t1 MTR_1g080330 42.647 136 77 1 212 346 165 300 4.92e-25 105
MS.gene072392.t1 MTR_7g098250 39.394 165 86 4 190 346 229 387 2.21e-24 104
MS.gene072392.t1 MTR_7g115530 43.651 126 70 1 222 346 218 343 2.39e-23 100
MS.gene072392.t1 MTR_2g027860 41.912 136 68 3 222 350 49 180 1.31e-21 94.7
MS.gene072392.t1 MTR_7g088070 32.653 147 99 0 204 350 32 178 8.82e-21 91.3
MS.gene072392.t1 MTR_7g088070 33.548 155 91 2 204 350 32 182 1.13e-20 90.9
MS.gene072392.t1 MTR_1g080330 40.678 118 69 1 212 328 165 282 2.10e-19 87.4
MS.gene072392.t1 MTR_5g027440 37.241 145 75 3 222 351 25 168 1.55e-17 82.0
MS.gene072392.t1 MTR_7g115530 40.741 108 63 1 222 328 218 325 3.47e-17 82.0
MS.gene072392.t1 MTR_7g093030 50.000 82 41 0 222 303 212 293 8.46e-17 80.5
MS.gene072392.t1 MTR_6g032990 35.461 141 74 2 221 344 41 181 8.21e-16 78.6
MS.gene072392.t1 MTR_6g444980 36.154 130 73 3 222 344 35 161 3.86e-15 76.3
MS.gene072392.t1 MTR_6g444980 36.154 130 73 3 222 344 35 161 5.19e-15 75.9
MS.gene072392.t1 MTR_2g027800 33.858 127 83 1 222 348 39 164 1.03e-14 74.3
MS.gene072392.t1 MTR_2g086450 33.113 151 68 3 221 344 44 188 1.14e-14 75.1
MS.gene072392.t1 MTR_1g090670 33.803 142 90 1 222 363 44 181 2.75e-14 73.2
MS.gene072392.t1 MTR_2g027800 32.886 149 85 3 222 363 39 179 1.41e-13 71.2
MS.gene072392.t1 MTR_7g068600 36.364 132 72 4 220 343 11 138 2.31e-13 69.3
MS.gene072392.t1 MTR_7g115530 41.237 97 44 2 222 318 218 301 3.36e-13 69.7
MS.gene072392.t1 MTR_8g086410 51.667 60 29 0 224 283 113 172 1.04e-12 69.3
MS.gene072392.t1 MTR_8g086410 60.377 53 21 0 224 276 111 163 1.30e-12 68.9
MS.gene072392.t1 MTR_8g086410 60.377 53 21 0 224 276 113 165 1.33e-12 68.9
MS.gene072392.t1 MTR_1g053830 42.391 92 47 3 206 296 1 87 1.95e-12 63.2
MS.gene072392.t1 MTR_7g115530 53.571 56 26 0 222 277 218 273 2.37e-12 67.8
MS.gene072392.t1 MTR_4g081710 31.852 135 80 2 222 344 17 151 4.50e-12 67.0
MS.gene072392.t1 MTR_7g115530 55.769 52 23 0 222 273 218 269 5.00e-12 66.2
MS.gene072392.t1 MTR_2g023580 43.590 78 40 1 199 276 36 109 1.10e-11 64.7
MS.gene072392.t1 MTR_3g450310 53.704 54 25 0 224 277 21 74 2.08e-11 63.2
MS.gene072392.t1 MTR_2g084230 56.604 53 23 0 224 276 99 151 2.78e-11 64.3
MS.gene072392.t1 MTR_7g115530 54.902 51 23 0 222 272 218 268 3.02e-11 63.9
MS.gene072392.t1 MTR_2g084230 56.604 53 23 0 224 276 99 151 3.50e-11 64.3
MS.gene072392.t1 MTR_0223s0040 45.714 70 37 1 224 293 20 88 4.60e-11 63.2
MS.gene072392.t1 MTR_7g069660 56.604 53 23 0 224 276 73 125 6.52e-11 63.5
MS.gene072392.t1 MTR_2g016220 54.717 53 24 0 224 276 91 143 7.22e-11 63.5
MS.gene072392.t1 MTR_2g016220 54.717 53 24 0 224 276 91 143 7.47e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072392.t1 AT5G06800 44.444 135 73 1 218 350 186 320 5.69e-27 110
MS.gene072392.t1 AT5G06800 45.000 140 70 2 218 350 186 325 2.13e-26 108
MS.gene072392.t1 AT2G01060 38.272 162 88 3 210 365 3 158 7.27e-24 100
MS.gene072392.t1 AT3G13040 30.519 308 159 11 96 364 98 389 4.99e-23 100
MS.gene072392.t1 AT3G13040 30.519 308 159 11 96 364 98 389 4.99e-23 100
MS.gene072392.t1 AT3G13040 30.519 308 159 11 96 364 98 389 4.99e-23 100
MS.gene072392.t1 AT5G29000 40.141 142 79 3 210 346 219 359 7.71e-23 99.4
MS.gene072392.t1 AT5G29000 40.141 142 79 3 210 346 176 316 9.19e-23 98.6
MS.gene072392.t1 AT5G29000 40.141 142 79 3 210 346 176 316 9.19e-23 98.6
MS.gene072392.t1 AT3G04450 40.909 132 72 2 220 346 236 366 1.21e-22 99.0
MS.gene072392.t1 AT3G04450 40.909 132 72 2 220 346 196 326 1.50e-22 98.2
MS.gene072392.t1 AT3G04450 40.909 132 72 2 220 346 196 326 1.50e-22 98.2
MS.gene072392.t1 AT4G28610 41.497 147 81 3 202 346 208 351 1.81e-22 98.2
MS.gene072392.t1 AT4G13640 36.765 136 73 3 222 344 37 172 5.99e-17 80.9
MS.gene072392.t1 AT1G79430 37.500 128 74 3 222 344 34 160 1.36e-16 80.5
MS.gene072392.t1 AT2G20400 38.686 137 72 3 222 352 231 361 1.91e-16 80.5
MS.gene072392.t1 AT3G24120 36.765 136 73 2 222 344 41 176 2.25e-16 79.3
MS.gene072392.t1 AT2G20400 38.686 137 73 3 222 352 231 362 4.60e-16 79.3
MS.gene072392.t1 AT3G04030 34.965 143 71 3 221 344 44 183 9.28e-16 78.6
MS.gene072392.t1 AT5G18240 34.286 140 76 2 221 344 44 183 1.54e-15 77.8
MS.gene072392.t1 AT5G18240 34.286 140 76 2 221 344 44 183 1.54e-15 77.8
MS.gene072392.t1 AT5G06800 61.667 60 21 1 218 275 186 245 2.05e-15 76.3
MS.gene072392.t1 AT4G13640 35.971 139 73 4 222 344 37 175 3.65e-15 75.5
MS.gene072392.t1 AT1G69580 34.868 152 75 4 222 351 34 183 1.18e-14 74.7
MS.gene072392.t1 AT3G24120 35.971 139 73 3 222 344 41 179 1.20e-14 74.3
MS.gene072392.t1 AT1G69580 33.987 153 76 4 222 351 34 184 3.83e-14 73.2
MS.gene072392.t1 AT5G29000 48.529 68 35 0 210 277 219 286 7.00e-14 72.0
MS.gene072392.t1 AT3G04450 51.724 58 28 0 220 277 236 293 2.15e-13 70.5
MS.gene072392.t1 AT2G42660 60.377 53 21 0 224 276 52 104 2.24e-13 69.7
MS.gene072392.t1 AT5G18240 33.571 140 75 3 221 344 44 181 2.68e-13 70.9
MS.gene072392.t1 AT3G12730 54.098 61 28 0 222 282 23 83 3.92e-13 68.9
MS.gene072392.t1 AT3G04030 33.566 143 72 4 221 344 44 182 4.86e-13 70.1
MS.gene072392.t1 AT2G06020 31.387 137 80 3 147 275 9 139 1.85e-12 67.8
MS.gene072392.t1 AT4G04605 47.619 63 32 1 224 286 16 77 4.15e-12 65.5
MS.gene072392.t1 AT3G04030 33.333 126 62 3 221 327 44 166 1.34e-11 65.9
MS.gene072392.t1 AT5G18240 30.556 144 79 3 221 343 44 187 1.64e-11 65.5
MS.gene072392.t1 AT5G18240 30.556 144 79 3 221 343 44 187 1.64e-11 65.5
MS.gene072392.t1 AT2G40260 54.717 53 24 0 224 276 84 136 1.76e-11 65.5
MS.gene072392.t1 AT1G14600 45.455 77 38 1 205 277 2 78 4.18e-11 63.2
MS.gene072392.t1 AT4G04555 54.902 51 23 0 226 276 18 68 6.37e-11 59.3
MS.gene072392.t1 AT2G38300 56.604 53 23 0 224 276 56 108 8.95e-11 63.2

Find 0 sgRNAs with CRISPR-Local

Find 135 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAACAAATAAAAACA+AGG + 51337:5860-5879 None:intergenic 10.0%
!! AAAACTAAAAAGAAAATCAA+TGG - 51337:4652-4671 MS.gene072392:intron 15.0%
!! AAATTATTGAAATTGTTGAA+TGG + 51337:5282-5301 None:intergenic 15.0%
!! AGGAAAATAAACAAATAAAA+AGG + 51337:4892-4911 None:intergenic 15.0%
!! ATCTAATACTATAATTAAAC+AGG + 51337:4331-4350 None:intergenic 15.0%
!! GAATCTAATTATGAAATTTA+GGG - 51337:4515-4534 MS.gene072392:CDS 15.0%
!! TCTAATAAAATTGATTAAAG+TGG - 51337:4596-4615 MS.gene072392:CDS 15.0%
!! TGAATCTAATTATGAAATTT+AGG - 51337:4514-4533 MS.gene072392:CDS 15.0%
!! TTACTAGTAATCTATTTATT+CGG - 51337:4802-4821 MS.gene072392:intron 15.0%
!!! TCATGGATTTTTTTTTTTAA+TGG - 51337:4377-4396 MS.gene072392:CDS 15.0%
!! AAAAACATGATGAATTGTTT+AGG - 51337:4090-4109 MS.gene072392:intron 20.0%
!! AAATCCATGAAATACTTAAA+AGG + 51337:4367-4386 None:intergenic 20.0%
!! AATATACAATTATGCTTTGA+TGG - 51337:5764-5783 MS.gene072392:CDS 20.0%
!! AATTAGATTCATTGCATATA+TGG + 51337:4505-4524 None:intergenic 20.0%
!! CATTTCATATATAATTCAGA+TGG + 51337:4220-4239 None:intergenic 20.0%
!! TACTAGTAATCTATTTATTC+GGG - 51337:4803-4822 MS.gene072392:intron 20.0%
!! TTAGTTAATTACTTACTTTC+TGG + 51337:5113-5132 None:intergenic 20.0%
!!! AAAAGTAATGTTAGTTTTCA+AGG - 51337:3813-3832 MS.gene072392:intron 20.0%
!!! AACAATTCATCATGTTTTTT+CGG + 51337:4089-4108 None:intergenic 20.0%
!!! AAGAATACTGTAACTTTTTT+TGG + 51337:4295-4314 None:intergenic 20.0%
!!! ACTAACATTACTTTTGATTT+TGG + 51337:3808-3827 None:intergenic 20.0%
!!! AGTTGGGAATTTTTTTTTAA+AGG - 51337:4696-4715 MS.gene072392:intron 20.0%
!!! TCACATAAACATTCTTTTAA+CGG - 51337:4619-4638 MS.gene072392:CDS 20.0%
! ATTAGAAAAACACGTTAGAT+TGG + 51337:4582-4601 None:intergenic 25.0%
! CAAATAAAAACAAGGTTGTA+AGG + 51337:5852-5871 None:intergenic 25.0%
! TGGATTATAGCTTATTAGAA+AGG + 51337:4912-4931 None:intergenic 25.0%
!! AATTTCTTTTCAGAGAACTA+AGG - 51337:4145-4164 MS.gene072392:intron 25.0%
!! ATTGTCACTACAAATTTTCA+AGG - 51337:3744-3763 MS.gene072392:intron 25.0%
!! GAATATAGTAATTTTCAGTC+TGG - 51337:4038-4057 MS.gene072392:intron 25.0%
!! TCTCTGAAAAGAAATTTCAA+GGG + 51337:4141-4160 None:intergenic 25.0%
!! TTCTCTGAAAAGAAATTTCA+AGG + 51337:4142-4161 None:intergenic 25.0%
!!! AAATTTAGGGTTTTGTGAAA+GGG - 51337:4528-4547 MS.gene072392:CDS 25.0%
!!! TAGTCCTTTTAAGTATTTCA+TGG - 51337:4360-4379 MS.gene072392:CDS 25.0%
!!! TTTTTTTCTCTTCTGATTAC+TGG - 51337:5628-5647 MS.gene072392:CDS 25.0%
AAAGATGTATGGAACTCAAT+GGG - 51337:3617-3636 MS.gene072392:CDS 30.0%
AAAGGGACAATAATGAATTG+CGG - 51337:4545-4564 MS.gene072392:CDS 30.0%
AAGTTATGGGACTTATAGTT+GGG - 51337:4680-4699 MS.gene072392:intron 30.0%
ACAACACTGCTTACTTATTA+AGG - 51337:5444-5463 MS.gene072392:intron 30.0%
ACAATGTTAGAGTCAATTAC+CGG + 51337:5334-5353 None:intergenic 30.0%
AGGAATTAACAACCTAGTTA+AGG - 51337:3650-3669 MS.gene072392:CDS 30.0%
AGGTGAAGAATATTATGATG+AGG - 51337:3833-3852 MS.gene072392:intron 30.0%
ATCATATCTAGTATAGCCTT+AGG + 51337:5201-5220 None:intergenic 30.0%
CATGTAAAAGAAGAGTAAGA+TGG - 51337:5036-5055 MS.gene072392:intron 30.0%
TAGGTTGTTAATTCCTATGT+AGG + 51337:3646-3665 None:intergenic 30.0%
TGGTTTCATCTATTTGTGAA+TGG - 51337:4397-4416 MS.gene072392:CDS 30.0%
TTAAGCAAATTGAGGAATCA+CGG - 51337:5694-5713 MS.gene072392:CDS 30.0%
! AAACATTCTTTTAACGGAGT+TGG - 51337:4625-4644 MS.gene072392:CDS 30.0%
! ATGGCTTTTAACATGAGAAA+TGG + 51337:5241-5260 None:intergenic 30.0%
! CTCTGAAAAGAAATTTCAAG+GGG + 51337:4140-4159 None:intergenic 30.0%
! CTTACTCTTCTTTTACATGT+TGG + 51337:5035-5054 None:intergenic 30.0%
! GAACCAACCAAAGAAAATTT+TGG - 51337:5960-5979 MS.gene072392:CDS 30.0%
! GTTGTGTCCAAAATTTTCTT+TGG + 51337:5970-5989 None:intergenic 30.0%
! TGTCCAAAATTTTCTTTGGT+TGG + 51337:5966-5985 None:intergenic 30.0%
! TTCACTGATTATAATTGCAG+AGG - 51337:5170-5189 MS.gene072392:intron 30.0%
!! GAAATAGTTTTACCTGCAAA+TGG + 51337:5260-5279 None:intergenic 30.0%
!! GAAATTTAGGGTTTTGTGAA+AGG - 51337:4527-4546 MS.gene072392:CDS 30.0%
AACAACCTAGTTAAGGTTGT+TGG - 51337:3657-3676 MS.gene072392:CDS 35.0%
AAGTATTTCGCAACAGTTAG+AGG - 51337:5740-5759 MS.gene072392:CDS 35.0%
AATCAATGGTGTCCAAGTTA+TGG - 51337:4666-4685 MS.gene072392:intron 35.0%
ACAACCTAGTTAAGGTTGTT+GGG - 51337:3658-3677 MS.gene072392:CDS 35.0%
ACACTGCTTACTTATTAAGG+AGG - 51337:5447-5466 MS.gene072392:CDS 35.0%
AGAAGCAGAATTGTTAGAAG+TGG + 51337:5003-5022 None:intergenic 35.0%
AGATTCATCAACAGAGTACA+AGG + 51337:3976-3995 None:intergenic 35.0%
ATCAATGGTGTCCAAGTTAT+GGG - 51337:4667-4686 MS.gene072392:intron 35.0%
ATCCATGACTTACTATAGTC+AGG - 51337:4927-4946 MS.gene072392:intron 35.0%
ATGATAATCGTTGATCACCT+TGG - 51337:5083-5102 MS.gene072392:intron 35.0%
ATTTCTCCAACTCGTCAATT+AGG - 51337:4851-4870 MS.gene072392:intron 35.0%
CAAAGATGTATGGAACTCAA+TGG - 51337:3616-3635 MS.gene072392:CDS 35.0%
CAACATTGGTCAAAGATGTA+TGG - 51337:3606-3625 MS.gene072392:CDS 35.0%
CAACTATAAGTCCCATAACT+TGG + 51337:4681-4700 None:intergenic 35.0%
CAAGTTATGGGACTTATAGT+TGG - 51337:4679-4698 MS.gene072392:intron 35.0%
CAATATCCTAATTGACGAGT+TGG + 51337:4860-4879 None:intergenic 35.0%
CATACATCTTTGACCAATGT+TGG + 51337:3608-3627 None:intergenic 35.0%
CTTCTAACAATTCTGCTTCT+AGG - 51337:5003-5022 MS.gene072392:intron 35.0%
GTTGTAAGGATATACGACTT+TGG + 51337:5838-5857 None:intergenic 35.0%
TCATGTTAAAAGCCATTTGC+AGG - 51337:5245-5264 MS.gene072392:intron 35.0%
TGTAAAATTCTCTCCTCCAT+AGG + 51337:3934-3953 None:intergenic 35.0%
TGTGAATGGTGAATTGTGTT+GGG - 51337:4411-4430 MS.gene072392:intron 35.0%
TGTGTTCTGATCCAACAATT+TGG + 51337:3689-3708 None:intergenic 35.0%
TTATCTTTCAGAAAGACCTG+AGG - 51337:5498-5517 MS.gene072392:CDS 35.0%
TTGTGAATGGTGAATTGTGT+TGG - 51337:4410-4429 MS.gene072392:intron 35.0%
TTGTGATATGGGGAATAAGA+AGG - 51337:4438-4457 MS.gene072392:intron 35.0%
TTTAGGCAAAATACATCGTG+CGG + 51337:4754-4773 None:intergenic 35.0%
! AATTTTGGACACAACGAGAA+AGG - 51337:5975-5994 MS.gene072392:CDS 35.0%
! ATTCTTTTAACGGAGTTGGA+TGG - 51337:4629-4648 MS.gene072392:CDS 35.0%
! CAAACATCTCATGATGGTTT+TGG - 51337:3768-3787 MS.gene072392:intron 35.0%
! GTGATTCCTCAATTTGCTTA+AGG + 51337:5695-5714 None:intergenic 35.0%
!! ATGAGATTGAAGTTTCTGGT+TGG - 51337:3856-3875 MS.gene072392:CDS 35.0%
!!! CATCATGTTTTTTCGGAAAG+TGG + 51337:4082-4101 None:intergenic 35.0%
AAGAAGAGTAAGATGGACAG+AGG - 51337:5043-5062 MS.gene072392:intron 40.0%
AAGCAGACTCCTCAACTTAA+TGG - 51337:4969-4988 MS.gene072392:intron 40.0%
ACTCAATGGGAATCCTACAT+AGG - 51337:3630-3649 MS.gene072392:CDS 40.0%
AGCCTGACTATAGTAAGTCA+TGG + 51337:4932-4951 None:intergenic 40.0%
ATAATCGTTGATCACCTTGG+TGG - 51337:5086-5105 MS.gene072392:intron 40.0%
ATAATGAATTGCGGAGGGTA+AGG - 51337:4554-4573 MS.gene072392:CDS 40.0%
ATGCTGAATTGTCAAGCCTA+TGG - 51337:3915-3934 MS.gene072392:intron 40.0%
ATTGGAGGGTCTGTTATCTT+TGG + 51337:3897-3916 None:intergenic 40.0%
CAAGGTCAAACATCTCATGA+TGG - 51337:3762-3781 MS.gene072392:intron 40.0%
GAGGATGAGATTGAAGTTTC+TGG - 51337:3852-3871 MS.gene072392:CDS 40.0%
GCAACTTTCTTTGCGTCTAA+AGG + 51337:5889-5908 None:intergenic 40.0%
GGACAATAATGAATTGCGGA+GGG - 51337:4549-4568 MS.gene072392:CDS 40.0%
GTAGTGACAATGTTGTTGCA+GGG + 51337:3735-3754 None:intergenic 40.0%
TAATGAATTGCGGAGGGTAA+GGG - 51337:4555-4574 MS.gene072392:CDS 40.0%
TAGCAGCCTTAAGCAAATTG+AGG - 51337:5686-5705 MS.gene072392:CDS 40.0%
TAGGCTTGACAATTCAGCAT+TGG + 51337:3915-3934 None:intergenic 40.0%
TGTAGATCGACATTTCTGCA+CGG + 51337:5370-5389 None:intergenic 40.0%
TGTAGTGACAATGTTGTTGC+AGG + 51337:3736-3755 None:intergenic 40.0%
TGTTGGGCTGATTGTGATAT+GGG - 51337:4427-4446 MS.gene072392:intron 40.0%
! AGCGCTATTACGTCGATTAA+AGG - 51337:4727-4746 MS.gene072392:intron 40.0%
! CTTGACAATTCAGCATTGGA+GGG + 51337:3911-3930 None:intergenic 40.0%
! GACGAGTTGGAGAAATTGTT+AGG + 51337:4847-4866 None:intergenic 40.0%
! GCACACATTCCATTAAGTTG+AGG + 51337:4981-5000 None:intergenic 40.0%
! GCGCTATTACGTCGATTAAA+GGG - 51337:4728-4747 MS.gene072392:intron 40.0%
! TCAATTTGCTTAAGGCTGCT+AGG + 51337:5687-5706 None:intergenic 40.0%
! TTTTGCACATGCGTGACTTT+AGG + 51337:4771-4790 None:intergenic 40.0%
AATTGCAGAGGCAAAGCCTA+AGG - 51337:5182-5201 MS.gene072392:intron 45.0%
ACGCATGCATAAAGCTTTGC+AGG - 51337:5392-5411 MS.gene072392:intron 45.0%
ACTTACTTTCTGGACCACCA+AGG + 51337:5103-5122 None:intergenic 45.0%
CAAGGAGTTTGTGAACTGAG+AGG + 51337:3958-3977 None:intergenic 45.0%
CGCATGCATAAAGCTTTGCA+GGG - 51337:5393-5412 MS.gene072392:intron 45.0%
CTGAATTGTCAAGCCTATGG+AGG - 51337:3918-3937 MS.gene072392:intron 45.0%
CTGACCCAACAACCTTAACT+AGG + 51337:3665-3684 None:intergenic 45.0%
CTTTCAGAAAGACCTGAGGA+AGG - 51337:5502-5521 MS.gene072392:CDS 45.0%
GAGTCAATTACCGGCAAATG+AGG + 51337:5325-5344 None:intergenic 45.0%
GCTTAAGGCTGCTAGGAAAT+AGG + 51337:5680-5699 None:intergenic 45.0%
GGGACAATAATGAATTGCGG+AGG - 51337:4548-4567 MS.gene072392:CDS 45.0%
GTGTTGGGCTGATTGTGATA+TGG - 51337:4426-4445 MS.gene072392:intron 45.0%
GTTGGGCTGATTGTGATATG+GGG - 51337:4428-4447 MS.gene072392:intron 45.0%
GTTGGGTCAGACCAAATTGT+TGG - 51337:3675-3694 MS.gene072392:CDS 45.0%
TCTGTTCTATGTCCTTCCTC+AGG + 51337:5517-5536 None:intergenic 45.0%
TTCAAGGGGCTTCTCATCAA+TGG + 51337:4126-4145 None:intergenic 45.0%
TTCTGTGAAGCCTCATTTGC+CGG - 51337:5312-5331 MS.gene072392:intron 45.0%
TTGTTGCAGGGTGACTTGAT+TGG + 51337:3723-3742 None:intergenic 45.0%
! GCTTGACAATTCAGCATTGG+AGG + 51337:3912-3931 None:intergenic 45.0%
ATCACGGCAGTTGCATCTAG+AGG - 51337:5710-5729 MS.gene072392:CDS 50.0%


Chromosome Type Strat End Strand Name
51337 gene 3600 6012 3600 ID=MS.gene072392
51337 mRNA 3600 6012 3600 ID=MS.gene072392.t1;Parent=MS.gene072392
51337 exon 5446 6012 5446 ID=MS.gene072392.t1.exon1;Parent=MS.gene072392.t1
51337 CDS 5446 6012 5446 ID=cds.MS.gene072392.t1;Parent=MS.gene072392.t1
51337 exon 4496 4667 4496 ID=MS.gene072392.t1.exon2;Parent=MS.gene072392.t1
51337 CDS 4496 4667 4496 ID=cds.MS.gene072392.t1;Parent=MS.gene072392.t1
51337 exon 4346 4422 4346 ID=MS.gene072392.t1.exon3;Parent=MS.gene072392.t1
51337 CDS 4346 4422 4346 ID=cds.MS.gene072392.t1;Parent=MS.gene072392.t1
51337 exon 4198 4237 4198 ID=MS.gene072392.t1.exon4;Parent=MS.gene072392.t1
51337 CDS 4198 4237 4198 ID=cds.MS.gene072392.t1;Parent=MS.gene072392.t1
51337 exon 4049 4103 4049 ID=MS.gene072392.t1.exon5;Parent=MS.gene072392.t1
51337 CDS 4049 4103 4049 ID=cds.MS.gene072392.t1;Parent=MS.gene072392.t1
51337 exon 3851 3920 3851 ID=MS.gene072392.t1.exon6;Parent=MS.gene072392.t1
51337 CDS 3851 3920 3851 ID=cds.MS.gene072392.t1;Parent=MS.gene072392.t1
51337 exon 3600 3719 3600 ID=MS.gene072392.t1.exon7;Parent=MS.gene072392.t1
51337 CDS 3600 3719 3600 ID=cds.MS.gene072392.t1;Parent=MS.gene072392.t1
Gene Sequence

>MS.gene072392

ATGTACCAACATTGGTCAAAGATGTATGGAACTCAATGGGAATCCTACATAGGAATTAACAACCTAGTTAAGGTTGTTGGGTCAGACCAAATTGTTGGATCAGAACACATGAGTTATGAGCCAATCAAGTCACCCTGCAACAACATTGTCACTACAAATTTTCAAGGTCAAACATCTCATGATGGTTTTGGTGCAGTGAGTGTAGCCAAAATCAAAAGTAATGTTAGTTTTCAAGGTGAAGAATATTATGATGAGGATGAGATTGAAGTTTCTGGTTGGTGTTTTGATCAGTTTCCAAAGATAACAGACCCTCCAATGCTGAATTGTCAAGCCTATGGAGGAGAGAATTTTACAACCTCTCAGTTCACAAACTCCTTGTACTCTGTTGATGAATCTTTGTTGTCTAACAGTGCAGATAGTCATAATTCTTCTGAAGAAGAATATAGTAATTTTCAGTCTGGAAATATGTCATTTTATGACCACTTTCCGAAAAAACATGATGAATTGTTTAGGAATGATGCTTCCATTGATGAGAAGCCCCTTGAAATTTCTTTTCAGAGAACTAAGGTAATTCTTTCTTTCTTTCTTTCTTTGTATGTAGCTTGTAATTTTTTATTCCATCTGAATTATATATGAAATGATATATCATGTTGTGCTTTAACTTGTTTAATTATATTAGAGATTAGTGCTGTCCAAAAAAAGTTACAGTATTCTTTGTGCATTCATAACCTGTTTAATTATAGTATTAGATAATAGATATTAGTCCTTTTAAGTATTTCATGGATTTTTTTTTTTAATGGTTTCATCTATTTGTGAATGGTGAATTGTGTTGGGCTGATTGTGATATGGGGAATAAGAAGGTGATATAATATGAGATTGAAATTAATGTTTTGATTTTTCTTCCATATATGCAATGAATCTAATTATGAAATTTAGGGTTTTGTGAAAGGGACAATAATGAATTGCGGAGGGTAAGGGTCCAATCTAACGTGTTTTTCTAATAAAATTGATTAAAGTGGTCACATAAACATTCTTTTAACGGAGTTGGATGGAAAACTAAAAAGAAAATCAATGGTGTCCAAGTTATGGGACTTATAGTTGGGAATTTTTTTTTAAAGGACTACTAAAGCGCTATTACGTCGATTAAAGGGCCGCACGATGTATTTTGCCTAAAGTCACGCATGTGCAAAAACAAGAGTAGTTTACTAGTAATCTATTTATTCGGGTTAAGTGCTAAGTGTTAACCTAACAATTTCTCCAACTCGTCAATTAGGATATTGTAATCTATGCCTTTTTATTTGTTTATTTTCCTTTCTAATAAGCTATAATCCATGACTTACTATAGTCAGGCTCATCTACAAAGTCACAAAAGCAGACTCCTCAACTTAATGGAATGTGTGCCACTTCTAACAATTCTGCTTCTAGGAAAGCTCCAACATGTAAAAGAAGAGTAAGATGGACAGAGGATCTGCATGAATCATTCATGATAATCGTTGATCACCTTGGTGGTCCAGAAAGTAAGTAATTAACTAAGTAATAGCATTAGTTACACATAAGCAAATTCAATTAATTCACTGATTATAATTGCAGAGGCAAAGCCTAAGGCTATACTAGATATGATGAAATCAAATTTGCTATCCATTTCTCATGTTAAAAGCCATTTGCAGGTAAAACTATTTCCATTCAACAATTTCAATAATTTGTAAATGTTGTTCTGTGAAGCCTCATTTGCCGGTAATTGACTCTAACATTGTTCTTATATGATTGCCGTGCAGAAATGTCGATCTACAATACGCATGCATAAAGCTTTGCAGGGTAAATTAATTTTTTCATTGCATTCTATTACAACACTGCTTACTTATTAAGGAGGCTATGCGTATATTGTGACACGTTTATCTTTATCTTTCAGAAAGACCTGAGGAAGGACATAGAACAGATAGAGTCGCAGATCTTCAACTCAAAATGTAAATATTTTAGTGTTACGAATGATACTTATTGATTCTTTATGTAGTAATTGCAAGTTTTTTTTTTTTTTCTCTTCTGATTACTGGTTTTTTAAATTTATACACTTTGTTTTCCTATTTCCTAGCAGCCTTAAGCAAATTGAGGAATCACGGCAGTTGCATCTAGAGGTTCGAAAAAGTATTTCGCAACAGTTAGAGGTAATATACAATTATGCTTTGATGGAAACAAATTATACAGAATAAGTTATTATTGTTGAGATCATGAATCAGTCCAAAGTCGTATATCCTTACAACCTTGTTTTTATTTGTTATTTTTTCTTCGCCTTTAGACGCAAAGAAAGTTGCAAATACTAATTGAACAACATGACAAGAAGCTCAAACTAATGCAAAAAGAAAGAACCAACCAAAGAAAATTTTGGACACAACGAGAAAGGACAGTTCCCAAATAA
Protein sequence

>MS.gene072392.t1

MYQHWSKMYGTQWESYIGINNLVKVVGSDQIVGSEHMSYEPIKSPCNNIVTTNFQGQTSHDGFGAVSVAKIKSNVSFQGEEYYDEDEIEVSGWCFDQFPKITDPPMLNCQAYGGENFTTSQFTNSLYSVDESLLSNSADSHNSSEEEYSNFQSGNMSFYDHFPKKHDELFRNDASIDEKPLEISFQRTKSGSSTKSQKQTPQLNGMCATSNNSASRKAPTCKRRVRWTEDLHESFMIIVDHLGGPEKAKPKAILDMMKSNLLSISHVKSHLQKCRSTIRMHKALQERPEEGHRTDRVADLQLKILKQIEESRQLHLEVRKSISQQLETQRKLQILIEQHDKKLKLMQKERTNQRKFWTQRERTVPK