AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene072694

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072694.t1 MTR_7g109600 92.086 278 8 3 1 277 1 265 0.0 511
MS.gene072694.t1 MTR_7g109600 89.320 206 8 3 73 277 7 199 2.05e-128 363
MS.gene072694.t1 MTR_7g079040 54.331 127 51 3 43 163 144 269 2.03e-36 132
MS.gene072694.t1 MTR_2g032030 46.061 165 75 5 1 160 213 368 1.05e-35 132
MS.gene072694.t1 MTR_8g087000 57.273 110 42 3 25 131 45 152 1.39e-35 128
MS.gene072694.t1 MTR_2g032030 46.061 165 75 5 1 160 213 368 1.85e-35 132
MS.gene072694.t1 MTR_8g087000 56.481 108 42 3 27 131 48 153 2.94e-34 124
MS.gene072694.t1 MTR_8g028565 48.462 130 55 2 8 137 122 239 3.81e-34 126
MS.gene072694.t1 MTR_2g016770 51.200 125 55 4 24 146 9 129 5.74e-33 120
MS.gene072694.t1 MTR_2g016770 50.820 122 54 4 27 146 4 121 6.92e-32 117
MS.gene072694.t1 MTR_2g083870 54.032 124 47 5 2 120 31 149 2.19e-31 117
MS.gene072694.t1 MTR_1g099600 48.276 116 49 2 8 120 148 255 2.58e-30 115
MS.gene072694.t1 MTR_5g016610 54.945 91 37 1 20 110 170 256 6.51e-28 108
MS.gene072694.t1 MTR_8g098945 61.333 75 26 1 49 120 125 199 1.13e-27 108
MS.gene072694.t1 MTR_4g094908 55.814 86 34 1 25 110 242 323 1.84e-26 106
MS.gene072694.t1 MTR_1g009613 51.136 88 38 1 23 110 237 319 5.88e-26 104
MS.gene072694.t1 MTR_4g127040 55.056 89 36 2 22 110 218 302 1.32e-25 103
MS.gene072694.t1 MTR_2g024350 51.316 76 37 0 51 126 6 81 5.72e-23 94.4
MS.gene072694.t1 MTR_1g070455 60.000 60 24 0 51 110 291 350 3.82e-22 94.7
MS.gene072694.t1 MTR_2g024380 54.167 72 33 0 43 114 241 312 1.48e-21 94.0
MS.gene072694.t1 MTR_3g108960 43.023 86 40 1 25 110 295 371 5.56e-20 89.0
MS.gene072694.t1 MTR_0117s0040 55.000 60 27 0 51 110 72 131 7.16e-20 86.7
MS.gene072694.t1 MTR_3g053330 39.200 125 61 4 3 124 213 325 7.71e-20 89.0
MS.gene072694.t1 MTR_4g094588 60.317 63 24 1 54 116 179 240 2.22e-19 86.7
MS.gene072694.t1 MTR_7g110720 50.649 77 35 1 51 124 214 290 2.37e-19 87.4
MS.gene072694.t1 MTR_7g110720 50.649 77 35 1 51 124 187 263 2.90e-19 87.0
MS.gene072694.t1 MTR_2g023930 46.429 84 39 1 30 113 288 365 2.94e-19 87.8
MS.gene072694.t1 MTR_8g067635 42.991 107 56 1 7 113 308 409 3.10e-19 87.4
MS.gene072694.t1 MTR_1g086790 52.000 75 34 2 54 128 159 231 5.15e-19 85.5
MS.gene072694.t1 MTR_4g094412 55.556 63 28 0 53 115 243 305 5.24e-19 86.7
MS.gene072694.t1 MTR_6g053200 48.571 70 36 0 46 115 323 392 5.26e-19 87.0
MS.gene072694.t1 MTR_4g094412 55.556 63 28 0 53 115 234 296 5.73e-19 86.7
MS.gene072694.t1 MTR_4g132430 55.556 63 28 0 53 115 127 189 7.85e-19 85.5
MS.gene072694.t1 MTR_4g132430 55.556 63 28 0 53 115 261 323 1.17e-18 85.9
MS.gene072694.t1 MTR_5g042920 54.412 68 30 1 54 121 321 387 1.44e-18 85.1
MS.gene072694.t1 MTR_5g042920 47.826 69 32 3 54 120 152 218 1.54e-11 64.7
MS.gene072694.t1 MTR_8g069935 40.187 107 59 1 7 113 290 391 1.96e-18 85.1
MS.gene072694.t1 MTR_4g082580 46.512 86 44 2 54 139 279 362 2.08e-18 84.3
MS.gene072694.t1 MTR_4g082580 38.372 86 45 3 42 125 139 218 1.61e-11 64.3
MS.gene072694.t1 MTR_7g109800 40.777 103 56 3 54 152 146 247 2.34e-18 83.2
MS.gene072694.t1 MTR_2g033820 50.000 74 35 2 54 127 204 275 2.99e-18 84.0
MS.gene072694.t1 MTR_7g011820 40.594 101 57 2 54 152 411 510 4.13e-18 84.3
MS.gene072694.t1 MTR_7g011820 51.667 60 27 2 54 113 229 286 7.52e-12 65.5
MS.gene072694.t1 MTR_7g009730 55.932 59 26 0 53 111 219 277 4.63e-18 84.0
MS.gene072694.t1 MTR_4g122530 29.299 157 101 2 54 201 209 364 4.77e-18 83.6
MS.gene072694.t1 MTR_8g027860 46.296 108 51 4 3 108 91 193 8.33e-18 82.4
MS.gene072694.t1 MTR_2g088000 38.384 99 55 1 17 115 319 411 1.17e-17 82.8
MS.gene072694.t1 MTR_8g067650 44.444 90 43 1 24 113 317 399 3.88e-17 81.3
MS.gene072694.t1 MTR_7g062220 57.576 66 27 1 45 110 116 180 5.96e-17 79.7
MS.gene072694.t1 MTR_3g009470 53.623 69 31 1 54 122 496 563 6.68e-17 80.9
MS.gene072694.t1 MTR_3g009470 53.846 65 27 3 50 113 276 338 9.09e-14 71.6
MS.gene072694.t1 MTR_4g049790 47.761 67 35 0 49 115 308 374 7.43e-17 80.5
MS.gene072694.t1 MTR_5g091390 55.556 63 27 1 54 116 158 219 1.00e-16 79.0
MS.gene072694.t1 MTR_7g079010 56.897 58 24 1 54 111 142 198 1.40e-16 77.0
MS.gene072694.t1 MTR_4g107970 54.098 61 28 0 53 113 178 238 1.83e-16 79.3
MS.gene072694.t1 MTR_4g107970 54.098 61 28 0 53 113 255 315 1.83e-16 79.3
MS.gene072694.t1 MTR_4g049760 49.231 65 33 0 49 113 286 350 2.07e-16 79.3
MS.gene072694.t1 MTR_5g094430 53.030 66 30 1 54 119 253 317 2.68e-16 78.6
MS.gene072694.t1 MTR_5g094430 50.820 61 28 2 53 113 88 146 2.08e-12 67.0
MS.gene072694.t1 MTR_4g007060 46.269 67 36 0 54 120 129 195 2.78e-16 77.4
MS.gene072694.t1 MTR_5g094430 53.030 66 30 1 54 119 231 295 2.81e-16 78.6
MS.gene072694.t1 MTR_5g094430 50.820 61 28 2 53 113 66 124 2.44e-12 67.0
MS.gene072694.t1 MTR_1g015140 54.237 59 26 1 54 112 103 160 3.02e-16 74.7
MS.gene072694.t1 MTR_3g056100 38.136 118 62 4 9 119 223 336 3.16e-16 78.6
MS.gene072694.t1 MTR_3g056100 50.000 60 28 2 54 113 100 157 1.57e-11 64.7
MS.gene072694.t1 MTR_4g007060 46.269 67 36 0 54 120 163 229 3.21e-16 77.4
MS.gene072694.t1 MTR_3g056100 38.136 118 62 4 9 119 210 323 3.79e-16 78.2
MS.gene072694.t1 MTR_3g056100 50.000 60 28 2 54 113 100 157 1.69e-11 64.3
MS.gene072694.t1 MTR_5g097490 39.130 115 57 3 13 115 200 313 3.99e-16 77.8
MS.gene072694.t1 MTR_5g094430 53.030 66 30 1 54 119 365 429 4.28e-16 78.2
MS.gene072694.t1 MTR_5g094430 51.667 60 27 2 54 113 201 258 3.03e-12 66.6
MS.gene072694.t1 MTR_3g056100 39.130 115 65 3 9 119 367 480 4.83e-16 78.2
MS.gene072694.t1 MTR_3g056100 50.000 60 28 2 54 113 244 301 1.69e-11 64.7
MS.gene072694.t1 MTR_3g056100 39.640 111 62 3 9 115 354 463 5.92e-16 77.8
MS.gene072694.t1 MTR_3g056100 50.000 60 28 2 54 113 244 301 1.84e-11 64.3
MS.gene072694.t1 MTR_2g045360 49.333 75 32 1 54 122 212 286 6.38e-16 77.4
MS.gene072694.t1 MTR_3g104750 56.897 58 24 1 54 111 105 161 6.72e-16 73.9
MS.gene072694.t1 MTR_7g071120 48.571 70 35 1 54 123 325 393 7.38e-16 77.4
MS.gene072694.t1 MTR_7g071120 55.000 60 25 2 54 113 167 224 2.17e-13 70.1
MS.gene072694.t1 MTR_7g028415 50.000 58 28 1 54 111 94 150 1.56e-15 73.2
MS.gene072694.t1 MTR_7g028710 50.000 58 28 1 54 111 94 150 1.56e-15 73.2
MS.gene072694.t1 MTR_2g105060 47.541 61 32 0 54 114 95 155 1.60e-15 74.3
MS.gene072694.t1 MTR_7g117200 41.026 117 60 4 3 113 71 184 1.82e-15 75.5
MS.gene072694.t1 MTR_2g105060 47.541 61 32 0 54 114 170 230 1.87e-15 75.5
MS.gene072694.t1 MTR_5g043880 42.574 101 55 3 10 110 83 180 2.99e-15 74.3
MS.gene072694.t1 MTR_3g106060 32.240 183 103 6 39 206 117 293 3.07e-15 74.3
MS.gene072694.t1 MTR_4g130900 44.444 72 39 1 43 114 349 419 3.25e-15 75.5
MS.gene072694.t1 MTR_7g100510 47.887 71 33 2 53 123 361 427 4.19e-15 75.1
MS.gene072694.t1 MTR_7g100510 53.333 60 26 2 54 113 190 247 6.34e-13 68.6
MS.gene072694.t1 MTR_4g047580 43.023 86 43 1 30 115 264 343 4.74e-15 75.1
MS.gene072694.t1 MTR_1g077780 47.059 68 35 1 54 121 63 129 6.44e-15 70.9
MS.gene072694.t1 MTR_8g087000 57.895 57 22 1 73 129 35 89 6.64e-15 71.6
MS.gene072694.t1 MTR_7g080000 40.659 91 48 2 54 139 433 522 7.74e-15 74.7
MS.gene072694.t1 MTR_7g080000 48.387 62 30 2 54 115 235 294 1.51e-12 67.8
MS.gene072694.t1 MTR_7g080020 46.053 76 35 2 54 124 494 568 7.77e-15 74.7
MS.gene072694.t1 MTR_7g080020 53.333 60 26 2 54 113 281 338 9.95e-13 68.6
MS.gene072694.t1 MTR_4g013260 48.387 62 31 1 54 115 337 397 1.05e-14 73.9
MS.gene072694.t1 MTR_4g013260 53.333 60 27 1 54 113 185 243 1.50e-13 70.5
MS.gene072694.t1 MTR_8g099350 34.545 165 80 5 24 184 106 246 1.39e-14 73.2
MS.gene072694.t1 MTR_3g090860 53.226 62 27 1 49 108 129 190 1.65e-14 72.8
MS.gene072694.t1 MTR_5g074400 49.254 67 33 1 54 120 421 486 2.23e-14 73.2
MS.gene072694.t1 MTR_5g074400 53.333 60 26 2 54 113 244 301 1.73e-12 67.4
MS.gene072694.t1 MTR_3g095040 50.000 60 29 1 54 113 119 177 2.97e-14 70.1
MS.gene072694.t1 MTR_8g092010 50.000 60 29 1 54 113 109 167 3.26e-14 69.7
MS.gene072694.t1 MTR_6g086555 46.250 80 35 3 35 113 194 266 4.63e-14 72.0
MS.gene072694.t1 MTR_3g031220 45.714 70 37 1 54 123 366 434 5.93e-14 72.0
MS.gene072694.t1 MTR_3g031220 51.613 62 28 2 54 115 199 258 3.63e-13 69.7
MS.gene072694.t1 MTR_3g009470 53.846 65 27 3 50 113 276 338 8.05e-14 71.6
MS.gene072694.t1 MTR_1g013760 47.368 57 30 0 54 110 141 197 1.64e-13 69.3
MS.gene072694.t1 MTR_1g013790 46.667 60 32 0 54 113 102 161 1.92e-13 68.9
MS.gene072694.t1 MTR_3g031220 51.613 62 28 2 54 115 199 258 2.91e-13 69.3
MS.gene072694.t1 MTR_8g007270 54.386 57 25 1 54 110 155 210 3.64e-13 67.8
MS.gene072694.t1 MTR_1g078260 50.000 64 30 2 48 110 242 304 1.07e-12 68.2
MS.gene072694.t1 MTR_8g096730 44.828 58 31 1 54 111 71 127 1.51e-12 64.3
MS.gene072694.t1 MTR_3g095080 45.588 68 36 1 54 121 145 211 1.14e-11 63.2
MS.gene072694.t1 MTR_3g095080 45.588 68 36 1 54 121 169 235 1.70e-11 63.2
MS.gene072694.t1 MTR_8g092140 45.588 68 36 1 54 121 161 227 2.01e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072694.t1 AT2G34830 54.783 115 51 1 1 114 162 276 1.10e-35 132
MS.gene072694.t1 AT2G34830 54.783 115 51 1 1 114 171 285 1.12e-35 132
MS.gene072694.t1 AT4G01250 50.000 130 48 2 24 145 108 228 5.85e-35 127
MS.gene072694.t1 AT1G29280 60.396 101 34 3 25 122 44 141 9.36e-34 124
MS.gene072694.t1 AT3G58710 54.198 131 43 4 10 126 14 141 1.00e-33 124
MS.gene072694.t1 AT1G30650 60.417 96 37 1 19 113 182 277 1.99e-33 126
MS.gene072694.t1 AT3G58710 60.000 105 36 3 25 126 41 142 7.37e-33 121
MS.gene072694.t1 AT5G52830 43.871 155 70 3 24 169 144 290 6.68e-32 120
MS.gene072694.t1 AT4G23550 52.336 107 48 1 43 146 130 236 8.68e-28 109
MS.gene072694.t1 AT2G23320 53.333 90 36 2 22 110 213 297 4.34e-27 107
MS.gene072694.t1 AT5G45050 56.044 91 32 1 24 114 1131 1213 2.47e-26 108
MS.gene072694.t1 AT5G45050 56.044 91 32 1 24 114 1159 1241 2.57e-26 108
MS.gene072694.t1 AT5G45050 56.044 91 32 1 24 114 1020 1102 2.91e-26 108
MS.gene072694.t1 AT4G24240 56.180 89 35 2 22 110 254 338 2.97e-26 105
MS.gene072694.t1 AT2G30590 52.222 90 39 2 22 111 286 371 1.19e-25 104
MS.gene072694.t1 AT4G31550 54.651 86 35 2 25 110 221 302 1.62e-24 100
MS.gene072694.t1 AT5G28650 48.936 94 42 2 18 110 231 319 1.86e-24 100
MS.gene072694.t1 AT2G24570 56.000 75 31 1 36 110 228 300 2.68e-24 100
MS.gene072694.t1 AT4G31550 56.000 75 31 1 36 110 231 303 2.99e-24 100
MS.gene072694.t1 AT3G04670 47.872 94 43 2 18 110 231 319 5.24e-24 99.4
MS.gene072694.t1 AT5G45260 60.274 73 24 2 53 120 1208 1280 1.90e-22 97.4
MS.gene072694.t1 AT4G04450 39.655 116 64 3 28 137 170 285 4.19e-20 89.7
MS.gene072694.t1 AT4G04450 39.655 116 64 3 28 137 264 379 4.77e-20 90.1
MS.gene072694.t1 AT1G29860 55.882 68 29 1 54 121 137 203 5.69e-20 87.4
MS.gene072694.t1 AT5G46350 54.321 81 32 2 54 130 184 263 5.95e-20 88.2
MS.gene072694.t1 AT1G68150 48.000 75 39 0 53 127 235 309 1.35e-19 87.8
MS.gene072694.t1 AT4G18170 48.485 99 48 2 20 116 137 234 1.41e-19 87.0
MS.gene072694.t1 AT4G22070 46.429 84 39 1 30 113 280 357 1.71e-19 88.2
MS.gene072694.t1 AT4G22070 46.429 84 39 1 30 113 280 357 1.71e-19 88.2
MS.gene072694.t1 AT4G22070 46.429 84 39 1 30 113 280 357 1.71e-19 88.2
MS.gene072694.t1 AT4G22070 46.429 84 39 1 30 113 280 357 1.71e-19 88.2
MS.gene072694.t1 AT2G04880 54.930 71 31 1 53 123 283 352 2.36e-19 87.8
MS.gene072694.t1 AT2G04880 48.387 62 30 2 54 115 112 171 4.15e-12 66.2
MS.gene072694.t1 AT2G04880 53.425 73 33 1 51 123 305 376 2.69e-19 87.8
MS.gene072694.t1 AT2G04880 48.387 62 30 2 54 115 112 171 4.52e-12 66.2
MS.gene072694.t1 AT1G62300 57.377 61 26 0 53 113 312 372 4.46e-19 87.0
MS.gene072694.t1 AT5G49520 60.000 60 23 1 54 113 222 280 6.69e-19 85.9
MS.gene072694.t1 AT1G18860 49.412 85 37 2 29 113 221 299 7.15e-19 86.7
MS.gene072694.t1 AT4G26640 34.228 149 76 3 12 151 176 311 1.94e-18 84.7
MS.gene072694.t1 AT4G26640 44.595 74 39 2 51 124 33 104 6.19e-13 68.6
MS.gene072694.t1 AT4G26640 34.228 149 76 3 12 151 176 311 1.94e-18 84.7
MS.gene072694.t1 AT4G26640 44.595 74 39 2 51 124 33 104 6.19e-13 68.6
MS.gene072694.t1 AT4G26640 34.228 149 76 3 12 151 176 311 1.94e-18 84.7
MS.gene072694.t1 AT4G26640 44.595 74 39 2 51 124 33 104 6.19e-13 68.6
MS.gene072694.t1 AT4G26640 34.228 149 76 3 12 151 176 311 1.94e-18 84.7
MS.gene072694.t1 AT4G26640 44.595 74 39 2 51 124 33 104 6.19e-13 68.6
MS.gene072694.t1 AT4G26640 34.228 149 76 3 12 151 280 415 3.71e-18 84.3
MS.gene072694.t1 AT4G26640 44.595 74 39 2 51 124 137 208 1.03e-12 68.2
MS.gene072694.t1 AT4G26640 34.228 149 76 3 12 151 312 447 4.10e-18 84.3
MS.gene072694.t1 AT4G26640 44.595 74 39 2 51 124 169 240 1.27e-12 67.8
MS.gene072694.t1 AT4G26640 34.228 149 76 3 12 151 352 487 4.46e-18 84.3
MS.gene072694.t1 AT4G26640 44.595 74 39 2 51 124 209 280 1.29e-12 68.2
MS.gene072694.t1 AT2G25000 50.000 70 35 0 54 123 104 173 8.70e-18 80.5
MS.gene072694.t1 AT2G25000 50.000 70 35 0 54 123 104 173 8.70e-18 80.5
MS.gene072694.t1 AT4G01720 45.122 82 39 1 32 113 224 299 1.27e-17 82.8
MS.gene072694.t1 AT2G25000 50.000 70 35 0 54 123 126 195 1.35e-17 80.5
MS.gene072694.t1 AT5G15130 49.333 75 35 1 53 124 227 301 1.42e-17 82.8
MS.gene072694.t1 AT2G25000 50.000 70 35 0 54 123 147 216 1.77e-17 80.5
MS.gene072694.t1 AT5G15130 49.333 75 35 1 53 124 185 259 2.06e-17 82.0
MS.gene072694.t1 AT3G62340 40.000 120 64 3 54 169 119 234 2.21e-17 80.5
MS.gene072694.t1 AT4G31800 53.226 62 29 0 54 115 112 173 2.26e-17 79.7
MS.gene072694.t1 AT4G31800 53.226 62 29 0 54 115 177 238 2.49e-17 80.5
MS.gene072694.t1 AT1G13960 54.386 57 25 1 54 110 257 312 2.53e-17 81.3
MS.gene072694.t1 AT1G13960 53.333 60 26 2 54 113 77 134 4.88e-13 68.9
MS.gene072694.t1 AT2G21900 33.019 106 68 2 11 116 69 171 2.62e-17 78.6
MS.gene072694.t1 AT2G03340 51.515 66 31 1 54 119 416 480 2.71e-17 81.6
MS.gene072694.t1 AT2G03340 45.333 75 38 3 37 110 233 305 1.86e-12 67.4
MS.gene072694.t1 AT1G13960 54.386 57 25 1 54 110 410 465 4.72e-17 81.3
MS.gene072694.t1 AT1G13960 53.333 60 26 2 54 113 230 287 7.39e-13 68.6
MS.gene072694.t1 AT1G80840 47.692 65 34 0 54 118 147 211 1.35e-16 78.6
MS.gene072694.t1 AT2G30250 54.545 66 29 1 54 119 329 393 1.88e-16 79.0
MS.gene072694.t1 AT1G55600 48.438 64 32 1 52 115 306 368 2.02e-16 79.3
MS.gene072694.t1 AT4G23810 48.276 87 40 2 24 108 132 215 2.50e-16 78.2
MS.gene072694.t1 AT1G69310 44.565 92 47 4 19 110 116 203 3.64e-16 77.0
MS.gene072694.t1 AT1G69310 44.565 92 47 4 19 110 116 203 3.64e-16 77.0
MS.gene072694.t1 AT1G69310 44.565 92 47 4 19 110 116 203 3.64e-16 77.0
MS.gene072694.t1 AT3G01080 53.968 63 28 1 51 113 304 365 5.18e-16 77.8
MS.gene072694.t1 AT3G01080 53.333 60 26 2 54 113 168 225 9.79e-13 68.2
MS.gene072694.t1 AT2G38470 51.389 72 33 2 54 124 363 433 5.20e-16 78.2
MS.gene072694.t1 AT2G38470 51.667 60 27 2 54 113 185 242 5.29e-12 66.2
MS.gene072694.t1 AT3G01080 55.000 60 26 1 54 113 345 403 6.80e-16 77.4
MS.gene072694.t1 AT3G01080 53.333 60 26 2 54 113 206 263 1.19e-12 67.8
MS.gene072694.t1 AT4G30935 44.444 72 39 1 43 114 321 391 6.81e-16 77.4
MS.gene072694.t1 AT5G13080 50.000 58 28 1 54 111 68 124 1.26e-15 72.8
MS.gene072694.t1 AT2G46400 36.806 144 77 4 14 145 65 206 1.60e-15 75.5
MS.gene072694.t1 AT5G56270 53.226 62 28 1 54 115 488 548 1.74e-15 76.6
MS.gene072694.t1 AT5G56270 34.646 127 80 3 50 175 269 393 1.53e-13 70.9
MS.gene072694.t1 AT4G11070 41.509 106 57 2 5 108 64 166 1.94e-15 75.1
MS.gene072694.t1 AT5G26170 54.386 57 25 1 54 110 114 169 2.38e-15 72.8
MS.gene072694.t1 AT4G11070 41.509 106 57 2 5 108 96 198 2.58e-15 75.1
MS.gene072694.t1 AT2G47260 53.333 60 27 1 54 113 175 233 2.79e-15 75.1
MS.gene072694.t1 AT2G46130 48.611 72 36 1 54 125 31 101 3.57e-15 70.5
MS.gene072694.t1 AT5G43290 46.429 84 41 3 29 110 89 170 8.46e-15 73.2
MS.gene072694.t1 AT1G64000 50.000 58 28 1 54 111 115 171 1.39e-14 70.9
MS.gene072694.t1 AT4G26440 50.000 66 32 1 54 119 373 437 1.50e-14 73.9
MS.gene072694.t1 AT4G26440 47.297 74 32 3 54 122 179 250 4.35e-12 66.2
MS.gene072694.t1 AT5G41570 50.000 58 28 1 54 111 99 155 1.52e-14 70.5
MS.gene072694.t1 AT5G24110 42.222 90 43 3 23 108 86 170 4.09e-14 71.6
MS.gene072694.t1 AT3G01970 47.368 57 29 1 54 110 66 121 5.94e-14 68.2
MS.gene072694.t1 AT2G37260 54.386 57 25 1 54 110 350 405 6.76e-14 71.6
MS.gene072694.t1 AT2G37260 45.122 82 38 3 54 130 166 245 3.23e-11 63.5
MS.gene072694.t1 AT2G37260 54.386 57 25 1 54 110 270 325 7.28e-14 71.2
MS.gene072694.t1 AT2G37260 45.122 82 38 3 54 130 86 165 3.64e-11 63.2
MS.gene072694.t1 AT2G37260 54.386 57 25 1 54 110 268 323 7.62e-14 70.9
MS.gene072694.t1 AT2G37260 45.122 82 38 3 54 130 84 163 3.72e-11 63.2
MS.gene072694.t1 AT2G44745 49.315 73 28 2 54 118 146 217 8.60e-14 69.3
MS.gene072694.t1 AT5G64810 50.877 57 27 1 54 110 111 166 1.30e-13 68.2
MS.gene072694.t1 AT5G07100 50.820 61 29 1 54 114 142 201 1.53e-13 68.6
MS.gene072694.t1 AT5G07100 46.667 75 37 2 54 126 25 98 6.35e-13 67.0
MS.gene072694.t1 AT5G07100 50.820 61 29 1 54 114 142 201 1.53e-13 68.6
MS.gene072694.t1 AT5G07100 46.667 75 37 2 54 126 25 98 6.35e-13 67.0
MS.gene072694.t1 AT5G07100 50.820 61 29 1 54 114 142 201 1.53e-13 68.6
MS.gene072694.t1 AT5G07100 46.667 75 37 2 54 126 25 98 6.35e-13 67.0
MS.gene072694.t1 AT5G07100 50.820 61 29 1 54 114 142 201 1.53e-13 68.6
MS.gene072694.t1 AT5G07100 46.667 75 37 2 54 126 25 98 6.35e-13 67.0
MS.gene072694.t1 AT5G07100 50.820 61 29 1 54 114 235 294 3.66e-13 68.9
MS.gene072694.t1 AT5G07100 33.898 118 72 3 54 171 118 229 1.51e-12 67.0
MS.gene072694.t1 AT1G69810 45.455 66 35 1 53 117 203 268 8.59e-13 68.2
MS.gene072694.t1 AT3G01080 53.333 60 26 2 54 113 206 263 1.47e-12 67.0
MS.gene072694.t1 AT1G69810 45.455 66 35 1 53 117 145 210 1.61e-12 67.0
MS.gene072694.t1 AT2G40740 43.373 83 45 1 52 132 181 263 2.34e-12 66.2
MS.gene072694.t1 AT2G40740 43.373 83 45 1 52 132 172 254 2.64e-12 66.2
MS.gene072694.t1 AT4G39410 46.479 71 32 2 54 119 224 293 5.41e-12 65.5
MS.gene072694.t1 AT4G12020 42.222 90 37 4 42 123 462 544 1.80e-11 65.1
MS.gene072694.t1 AT4G12020 42.222 90 37 4 42 123 462 544 1.80e-11 65.1
MS.gene072694.t1 AT4G12020 42.222 90 37 4 42 123 462 544 1.94e-11 64.7
MS.gene072694.t1 AT4G12020 42.222 90 37 4 42 123 462 544 1.95e-11 64.7
MS.gene072694.t1 AT4G12020 42.222 90 37 4 42 123 462 544 2.08e-11 64.7
MS.gene072694.t1 AT4G12020 42.222 90 37 4 42 123 462 544 2.11e-11 64.7
MS.gene072694.t1 AT4G12020 42.222 90 37 4 42 123 462 544 2.11e-11 64.7
MS.gene072694.t1 AT1G69310 41.304 92 46 5 19 110 116 199 2.28e-11 63.2
MS.gene072694.t1 AT4G12020 42.222 90 37 4 42 123 462 544 2.32e-11 64.7
MS.gene072694.t1 AT4G12020 42.222 90 37 4 42 123 462 544 2.35e-11 64.7
MS.gene072694.t1 AT4G12020 42.222 90 37 4 42 123 395 477 2.36e-11 64.7
MS.gene072694.t1 AT4G12020 42.222 90 37 4 42 123 462 544 2.42e-11 64.3
MS.gene072694.t1 AT3G56400 28.205 156 97 4 54 204 121 266 6.86e-11 62.0

Find 50 sgRNAs with CRISPR-Local

Find 228 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTATCTGTTTCTGTTCT+TGG 0.057409 7.3:+5409095 None:intergenic
AATCTATCTGTTTCTGTTCT+TGG 0.106628 7.3:+5409131 None:intergenic
ATCTTTGGTTGTTTCGGTTT+CGG 0.251832 7.3:+5409180 None:intergenic
CAAAATAGATCTTCTCTTAG+AGG 0.264483 7.3:-5408918 MS.gene072694:CDS
TTCTTAGATACTTGAGATTC+TGG 0.282785 7.3:+5412198 None:intergenic
AGATGTTTCTGACTCAAGTT+TGG 0.285896 7.3:+5412233 None:intergenic
TTACTTTGAAAGGATCTTCT+TGG 0.303191 7.3:+5408963 None:intergenic
GAGGAGAGGGCTGTGGGATC+TGG 0.309355 7.3:+5409238 None:intergenic
AGATCCTTTCAAAGTAAATA+TGG 0.318455 7.3:-5408957 MS.gene072694:CDS
TGGGAGATCTTTGGTTGTTT+CGG 0.331416 7.3:+5409174 None:intergenic
AGAAGTAACTGGGAGATCTT+TGG 0.334573 7.3:+5409165 None:intergenic
ACAGAAACAGATAGATTCTA+AGG 0.337204 7.3:-5409125 MS.gene072694:CDS
AAGAATGCACACCTTGGATA+TGG 0.343407 7.3:+5411911 None:intergenic
GTTTCGGTTTCGGATTCTTT+TGG 0.357685 7.3:+5409190 None:intergenic
GGTGGAGGAGGAGAGGGCTG+TGG 0.362115 7.3:+5409231 None:intergenic
AGATCTCCCAGTTACTTCTA+AGG 0.363955 7.3:-5409161 MS.gene072694:CDS
GATGTTTCTGACTCAAGTTT+GGG 0.377930 7.3:+5412234 None:intergenic
AGCTAAATTTGTGGTGGAGG+AGG 0.406354 7.3:+5409219 None:intergenic
GGATATGGAGAGCCTTTGAT+TGG 0.415352 7.3:+5411926 None:intergenic
ATCAATCAAGAAGGGGCAAC+AGG 0.418051 7.3:+5408752 None:intergenic
TTGTGCATGTCTCAGGAAAA+TGG 0.421017 7.3:-5412053 MS.gene072694:intron
CAGGAAAATGGTTGAGAAAA+CGG 0.425854 7.3:-5412041 MS.gene072694:CDS
AAATCTACAGGGGATATTAT+AGG 0.447185 7.3:-5409360 MS.gene072694:intron
GTGGAGGAGGAGAGGGCTGT+GGG 0.474492 7.3:+5409232 None:intergenic
AACACTTGAATCAATCAAGA+AGG 0.485790 7.3:+5408743 None:intergenic
AATCTCAAGTATCTAAGAAA+CGG 0.515113 7.3:-5412194 MS.gene072694:intron
TTGAGCTAAATTTGTGGTGG+AGG 0.521910 7.3:+5409216 None:intergenic
GTTAGCAAGGTGAAGAATGA+AGG 0.526261 7.3:-5411992 MS.gene072694:CDS
TGGTCGTTGAGCTAAATTTG+TGG 0.534592 7.3:+5409210 None:intergenic
ACGGTTGTGACTGTGAGGAT+TGG 0.535468 7.3:-5412022 MS.gene072694:CDS
TTATAGGTGCAGCACATGCA+AGG 0.538816 7.3:-5409344 MS.gene072694:CDS
ATTTGTGGTGGAGGAGGAGA+GGG 0.545438 7.3:+5409225 None:intergenic
ACACTTGAATCAATCAAGAA+GGG 0.556191 7.3:+5408744 None:intergenic
GATTGGAGAGAATGTTAGCA+AGG 0.558707 7.3:-5412005 MS.gene072694:CDS
TTTCTTCCTTAGAAGTAACT+GGG 0.572607 7.3:+5409155 None:intergenic
AGAACAGAAACAGATAGAAG+AGG 0.574832 7.3:-5409092 MS.gene072694:CDS
AGAGGGCTGTGGGATCTGGA+TGG 0.593338 7.3:+5409242 None:intergenic
ATGGTTATGTGTTGAAGTAT+AGG 0.596238 7.3:+5409261 None:intergenic
AATTTGTGGTGGAGGAGGAG+AGG 0.601207 7.3:+5409224 None:intergenic
TATAGGTGCAGCACATGCAA+GGG 0.614000 7.3:-5409343 MS.gene072694:CDS
ATGTTTCTGACTCAAGTTTG+GGG 0.614751 7.3:+5412235 None:intergenic
TCAAAGGCTCTCCATATCCA+AGG 0.621296 7.3:-5411922 MS.gene072694:intron
ATGTCCTCTGAGCAGTGTGT+TGG 0.622572 7.3:+5408995 None:intergenic
TCGTTGAGCTAAATTTGTGG+TGG 0.624880 7.3:+5409213 None:intergenic
TGCAAAATAGATGAAGACAT+AGG 0.628453 7.3:+5408809 None:intergenic
CACTTGAATCAATCAAGAAG+GGG 0.629385 7.3:+5408745 None:intergenic
TGTTTCTGACTCAAGTTTGG+GGG 0.636435 7.3:+5412236 None:intergenic
TTTAACTGTGCATAGCAGAG+TGG 0.661783 7.3:+5408890 None:intergenic
ATCTCCAACACACTGCTCAG+AGG 0.702439 7.3:-5408999 MS.gene072694:CDS
AGAAAACGGTTGTGACTGTG+AGG 0.708929 7.3:-5412027 MS.gene072694:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTAATAATTACTTTTAGA+TGG + chr7.3:5410837-5410856 None:intergenic 10.0%
!!! TAATAATTACTTTTTTTTGA+AGG + chr7.3:5410861-5410880 None:intergenic 10.0%
!!! TTTTTAAATTTTCTAGTTTT+TGG - chr7.3:5408890-5408909 MS.gene072694:CDS 10.0%
!! CTTTAAACATGTTATAATTA+TGG + chr7.3:5410530-5410549 None:intergenic 15.0%
!!! GAAATTTTAGAGAAAAAATT+GGG + chr7.3:5410681-5410700 None:intergenic 15.0%
!!! GATTTTGTTTATTTTTCTTT+TGG + chr7.3:5409977-5409996 None:intergenic 15.0%
!!! TCATTTTCTCAAATTAATAT+TGG - chr7.3:5410262-5410281 MS.gene072694:intron 15.0%
!!! TGAAATTTTAGAGAAAAAAT+TGG + chr7.3:5410682-5410701 None:intergenic 15.0%
!! AATATCATAAAAACTTGAGT+TGG + chr7.3:5410206-5410225 None:intergenic 20.0%
!! CATTAATTGAATCACATATA+TGG - chr7.3:5409154-5409173 MS.gene072694:CDS 20.0%
!!! TTTATTTTTCTTTTGGTGTA+TGG + chr7.3:5409970-5409989 None:intergenic 20.0%
!!! TTTTCCATATTTACTTTGAA+AGG + chr7.3:5412059-5412078 None:intergenic 20.0%
! AACATTAAACAAACTGCAAT+AGG + chr7.3:5411624-5411643 None:intergenic 25.0%
! AATCAATTACTTCTCTTCTT+TGG + chr7.3:5411268-5411287 None:intergenic 25.0%
! AATCTCAAGTATCTAAGAAA+CGG - chr7.3:5408815-5408834 MS.gene072694:CDS 25.0%
! AGATCCTTTCAAAGTAAATA+TGG - chr7.3:5412052-5412071 MS.gene072694:intron 25.0%
! ATATTCTGACAGAATCAATA+GGG - chr7.3:5409433-5409452 MS.gene072694:intron 25.0%
! ATGATGATTATCATATCTAG+TGG + chr7.3:5409125-5409144 None:intergenic 25.0%
! CTGTTACAACAGATAAAATA+AGG - chr7.3:5409862-5409881 MS.gene072694:intron 25.0%
! TATATTCTGACAGAATCAAT+AGG - chr7.3:5409432-5409451 MS.gene072694:intron 25.0%
! TGTAACTAAAAAGAGATATG+AGG + chr7.3:5409398-5409417 None:intergenic 25.0%
!! CACTCTTAATTTGAGTATTT+AGG + chr7.3:5410719-5410738 None:intergenic 25.0%
!! TATTGCAGTTTGTTTAATGT+TGG - chr7.3:5411623-5411642 MS.gene072694:intron 25.0%
!! TCATCTCTTATTTAAGTTCA+AGG + chr7.3:5410756-5410775 None:intergenic 25.0%
!! TGTAAAAAAGATTTGAGATG+TGG - chr7.3:5411290-5411309 MS.gene072694:intron 25.0%
!! TTTTTGAATATAACCACATG+TGG + chr7.3:5410240-5410259 None:intergenic 25.0%
!!! ACTAGGCTGTAAATATTTTT+TGG - chr7.3:5410069-5410088 MS.gene072694:intron 25.0%
!!! TTTTGTTTTTTGAGCGAATA+AGG + chr7.3:5411018-5411037 None:intergenic 25.0%
AAATCTACAGGGGATATTAT+AGG - chr7.3:5411649-5411668 MS.gene072694:intron 30.0%
AACCACAAAAATACAAGAAC+AGG + chr7.3:5411367-5411386 None:intergenic 30.0%
AATGTTGGTACAAATCTACA+GGG - chr7.3:5411638-5411657 MS.gene072694:intron 30.0%
ACACAATACTAATACAAGCT+TGG - chr7.3:5409570-5409589 MS.gene072694:intron 30.0%
ACAGAAACAGATAGATTCTA+AGG - chr7.3:5411884-5411903 MS.gene072694:intron 30.0%
ACATGCAAGATCTTAAAACA+GGG + chr7.3:5410154-5410173 None:intergenic 30.0%
ACCACAAAAATACAAGAACA+GGG + chr7.3:5411366-5411385 None:intergenic 30.0%
ATGGTTATGTGTTGAAGTAT+AGG + chr7.3:5411751-5411770 None:intergenic 30.0%
ATTGTCCTTATATCAAGACA+TGG + chr7.3:5409656-5409675 None:intergenic 30.0%
ATTTCTTTCTCAGCGTTAAA+AGG - chr7.3:5411512-5411531 MS.gene072694:intron 30.0%
CAAAATAGATCTTCTCTTAG+AGG - chr7.3:5412091-5412110 MS.gene072694:intron 30.0%
GGACAATTACTCATAGAAAT+TGG - chr7.3:5409669-5409688 MS.gene072694:intron 30.0%
GTCACATTAAGAAACTTCTT+TGG + chr7.3:5409516-5409535 None:intergenic 30.0%
TAATGTTGGTACAAATCTAC+AGG - chr7.3:5411637-5411656 MS.gene072694:intron 30.0%
TACATGCAAGATCTTAAAAC+AGG + chr7.3:5410155-5410174 None:intergenic 30.0%
TATGGACAAAAACCAATCAA+AGG - chr7.3:5409071-5409090 MS.gene072694:CDS 30.0%
TATTCTGACAGAATCAATAG+GGG - chr7.3:5409434-5409453 MS.gene072694:intron 30.0%
TGCAAAATAGATGAAGACAT+AGG + chr7.3:5412203-5412222 None:intergenic 30.0%
TTAAGCCATGTCTTGATATA+AGG - chr7.3:5409648-5409667 MS.gene072694:intron 30.0%
TTCTTAGATACTTGAGATTC+TGG + chr7.3:5408814-5408833 None:intergenic 30.0%
TTTCTTCCTTAGAAGTAACT+GGG + chr7.3:5411857-5411876 None:intergenic 30.0%
TTTCTTTCTCAGCGTTAAAA+GGG - chr7.3:5411513-5411532 MS.gene072694:intron 30.0%
! CTCATTCATACAATGTGTTT+TGG - chr7.3:5409761-5409780 MS.gene072694:intron 30.0%
! GAACATAGAGTTCTGATATT+TGG - chr7.3:5408851-5408870 MS.gene072694:CDS 30.0%
! GAAGATCTATTTTGTCAATG+TGG + chr7.3:5412085-5412104 None:intergenic 30.0%
! TAGAGTTCTGATATTTGGTT+TGG - chr7.3:5408856-5408875 MS.gene072694:CDS 30.0%
! TTACTTTGAAAGGATCTTCT+TGG + chr7.3:5412049-5412068 None:intergenic 30.0%
! TTTTCTTCCTTAGAAGTAAC+TGG + chr7.3:5411858-5411877 None:intergenic 30.0%
! TTTTGTATAAGAACCACATG+TGG - chr7.3:5410224-5410243 MS.gene072694:intron 30.0%
!! AATCTATCTGTTTCTGTTCT+TGG + chr7.3:5411881-5411900 None:intergenic 30.0%
!!! AGGCTGTAAATATTTTTTGG+AGG - chr7.3:5410072-5410091 MS.gene072694:intron 30.0%
!!! AGTGCCAAGGTTTTAAAAAA+CGG + chr7.3:5411600-5411619 None:intergenic 30.0%
!!! ATACAATGTGTTTTGGAAAG+GGG - chr7.3:5409768-5409787 MS.gene072694:intron 30.0%
!!! CATACAATGTGTTTTGGAAA+GGG - chr7.3:5409767-5409786 MS.gene072694:intron 30.0%
!!! CTTAGAGATGTTTTAAGACA+GGG - chr7.3:5409693-5409712 MS.gene072694:intron 30.0%
!!! TATTGCTGTTTCGGTATTTT+GGG + chr7.3:5410003-5410022 None:intergenic 30.0%
!!! TCATACAATGTGTTTTGGAA+AGG - chr7.3:5409766-5409785 MS.gene072694:intron 30.0%
!!! TGATTTTTTCGATGAACTTG+AGG - chr7.3:5412172-5412191 MS.gene072694:intron 30.0%
AAAGCATGCTACAACAGTAT+AGG - chr7.3:5410025-5410044 MS.gene072694:intron 35.0%
AAAGGACACAGCAGAAAAAA+AGG - chr7.3:5409918-5409937 MS.gene072694:intron 35.0%
AGAACAGAAACAGATAGAAG+AGG - chr7.3:5411917-5411936 MS.gene072694:intron 35.0%
ATAGGAACTGGTATGTTAGT+GGG - chr7.3:5410043-5410062 MS.gene072694:intron 35.0%
ATATATGTTGTGCATGTCTC+AGG - chr7.3:5408949-5408968 MS.gene072694:CDS 35.0%
ATGTTGGTACAAATCTACAG+GGG - chr7.3:5411639-5411658 MS.gene072694:intron 35.0%
CAATTACTTCTCTTCTTTGG+TGG + chr7.3:5411265-5411284 None:intergenic 35.0%
CAGGAAAATGGTTGAGAAAA+CGG - chr7.3:5408968-5408987 MS.gene072694:CDS 35.0%
CCACAAAAATACAAGAACAG+GGG + chr7.3:5411365-5411384 None:intergenic 35.0%
CCTGTCTTAAAACATCTCTA+AGG + chr7.3:5409695-5409714 None:intergenic 35.0%
TACTATACCAAAGCAAACAG+CGG - chr7.3:5409894-5409913 MS.gene072694:intron 35.0%
TATAGGAACTGGTATGTTAG+TGG - chr7.3:5410042-5410061 MS.gene072694:intron 35.0%
TTCTTTCTCAGCGTTAAAAG+GGG - chr7.3:5411514-5411533 MS.gene072694:intron 35.0%
TTGAATGTCACTACATGTGT+TGG - chr7.3:5409243-5409262 MS.gene072694:CDS 35.0%
! AAGGACTTCCTTCAGATTTT+TGG - chr7.3:5409036-5409055 MS.gene072694:CDS 35.0%
! AATGAGCCTCATTTTACTTC+CGG + chr7.3:5409747-5409766 None:intergenic 35.0%
! AGATGTTTCTGACTCAAGTT+TGG + chr7.3:5408779-5408798 None:intergenic 35.0%
! ATCTTTGGTTGTTTCGGTTT+CGG + chr7.3:5411832-5411851 None:intergenic 35.0%
! ATGTTTCTGACTCAAGTTTG+GGG + chr7.3:5408777-5408796 None:intergenic 35.0%
! CATCTATTTTGCACTTTACG+AGG - chr7.3:5412210-5412229 MS.gene072694:CDS 35.0%
! GATGTTTCTGACTCAAGTTT+GGG + chr7.3:5408778-5408797 None:intergenic 35.0%
! TACAAAAGATTTGAGATGCC+TGG - chr7.3:5411313-5411332 MS.gene072694:intron 35.0%
!! ATGCTTTGCTATTGCTGTTT+CGG + chr7.3:5410012-5410031 None:intergenic 35.0%
!! CTTCCCAAGGTTCTAAAAAA+CGG - chr7.3:5410333-5410352 MS.gene072694:intron 35.0%
!! CTTCTATCTGTTTCTGTTCT+TGG + chr7.3:5411917-5411936 None:intergenic 35.0%
!! TCTTTTGGTGTATGGCTTTT+TGG + chr7.3:5409962-5409981 None:intergenic 35.0%
!!! CCTTAGAGATGTTTTAAGAC+AGG - chr7.3:5409692-5409711 MS.gene072694:intron 35.0%
!!! CTATTGCTGTTTCGGTATTT+TGG + chr7.3:5410004-5410023 None:intergenic 35.0%
!!! GCTTCTCTCTACTTGTTTTT+TGG + chr7.3:5411700-5411719 None:intergenic 35.0%
!!! GGAGCATTTTTTCTGATGAA+AGG - chr7.3:5412231-5412250 MS.gene072694:CDS 35.0%
!!! GTGCCAAGGTTTTAAAAAAC+GGG + chr7.3:5411599-5411618 None:intergenic 35.0%
!!! TTCCTTCAGATTTTTGGTCT+TGG - chr7.3:5409042-5409061 MS.gene072694:CDS 35.0%
!!! TTTTGGTCTTGGAGGAAATA+TGG - chr7.3:5409053-5409072 MS.gene072694:CDS 35.0%
AAAAGGGGCAAAAACGGTAA+CGG - chr7.3:5411529-5411548 MS.gene072694:intron 40.0%
AAATACAAGAACAGGGGAAG+AGG + chr7.3:5411359-5411378 None:intergenic 40.0%
AACAGAAGAACAGGAGAAGA+AGG + chr7.3:5411422-5411441 None:intergenic 40.0%
AAGAATGCACACCTTGGATA+TGG + chr7.3:5409101-5409120 None:intergenic 40.0%
AATGTCACTACATGTGTTGG+TGG - chr7.3:5409246-5409265 MS.gene072694:CDS 40.0%
AGAAGTAACTGGGAGATCTT+TGG + chr7.3:5411847-5411866 None:intergenic 40.0%
AGATCTCCCAGTTACTTCTA+AGG - chr7.3:5411848-5411867 MS.gene072694:intron 40.0%
AGCGTTAAAAGGGGCAAAAA+CGG - chr7.3:5411523-5411542 MS.gene072694:intron 40.0%
CAAAAACGGCCGTTACAAAT+CGG + chr7.3:5411567-5411586 None:intergenic 40.0%
CTCCAAGACCAAAAATCTGA+AGG + chr7.3:5409047-5409066 None:intergenic 40.0%
GATACAAATAACGGTCTTCG+CGG - chr7.3:5410416-5410435 MS.gene072694:intron 40.0%
GATTGGAGAGAATGTTAGCA+AGG - chr7.3:5409004-5409023 MS.gene072694:CDS 40.0%
GCTGTTTGCTTTGGTATAGT+AGG + chr7.3:5409895-5409914 None:intergenic 40.0%
GTTAGCAAGGTGAAGAATGA+AGG - chr7.3:5409017-5409036 MS.gene072694:CDS 40.0%
TAGGAACTGGTATGTTAGTG+GGG - chr7.3:5410044-5410063 MS.gene072694:intron 40.0%
TCACAGAAAAAACGCCGTTA+CGG + chr7.3:5411492-5411511 None:intergenic 40.0%
TCGTTGAGCTAAATTTGTGG+TGG + chr7.3:5411799-5411818 None:intergenic 40.0%
TGCTACAACAGTATAGGAAC+TGG - chr7.3:5410031-5410050 MS.gene072694:intron 40.0%
TGGGAGATCTTTGGTTGTTT+CGG + chr7.3:5411838-5411857 None:intergenic 40.0%
TGGTCGTTGAGCTAAATTTG+TGG + chr7.3:5411802-5411821 None:intergenic 40.0%
TTGAGCTAAATTTGTGGTGG+AGG + chr7.3:5411796-5411815 None:intergenic 40.0%
TTGCTTTGGTATAGTAGGCT+GGG + chr7.3:5409890-5409909 None:intergenic 40.0%
TTGTGCATGTCTCAGGAAAA+TGG - chr7.3:5408956-5408975 MS.gene072694:CDS 40.0%
TTTAACTGTGCATAGCAGAG+TGG + chr7.3:5412122-5412141 None:intergenic 40.0%
TTTGCTTTGGTATAGTAGGC+TGG + chr7.3:5409891-5409910 None:intergenic 40.0%
! GTTTCGGTTTCGGATTCTTT+TGG + chr7.3:5411822-5411841 None:intergenic 40.0%
! TCTTATCTTTTGTACCAGCC+AGG + chr7.3:5411334-5411353 None:intergenic 40.0%
! TGTTTCTGACTCAAGTTTGG+GGG + chr7.3:5408776-5408795 None:intergenic 40.0%
! TTTGGTTTCTTTCCTGTTGC+TGG + chr7.3:5409944-5409963 None:intergenic 40.0%
!! AAGGTTCTAAAAAACGGTCG+CGG - chr7.3:5410339-5410358 MS.gene072694:intron 40.0%
!! CCCCTGTTCTTGTATTTTTG+TGG - chr7.3:5411362-5411381 MS.gene072694:intron 40.0%
!!! ATTTGTAACGGCCGTTTTTG+CGG - chr7.3:5411567-5411586 MS.gene072694:intron 40.0%
!!! CGACCGTTTTTTAGAACCTT+GGG + chr7.3:5410339-5410358 None:intergenic 40.0%
!!! CGTCCCGTTTTTTAAAACCT+TGG - chr7.3:5411593-5411612 MS.gene072694:intron 40.0%
!!! CTTCAGATTTTTGGTCTTGG+AGG - chr7.3:5409045-5409064 MS.gene072694:CDS 40.0%
AACTAGAGTCACTGAACCTG+TGG - chr7.3:5409472-5409491 MS.gene072694:intron 45.0%
AAGAACAGGAGAAGAAGGAC+AGG + chr7.3:5411417-5411436 None:intergenic 45.0%
ACAGGTTCAGTGACTCTAGT+TGG + chr7.3:5409473-5409492 None:intergenic 45.0%
AGAAAACGGTTGTGACTGTG+AGG - chr7.3:5408982-5409001 MS.gene072694:CDS 45.0%
AGCCTCCAAATTCGTTGGAA+CGG + chr7.3:5409719-5409738 None:intergenic 45.0%
AGGAACTGGTATGTTAGTGG+GGG - chr7.3:5410045-5410064 MS.gene072694:intron 45.0%
AGTGGAAAGAATGCACACCT+TGG + chr7.3:5409107-5409126 None:intergenic 45.0%
CACTTATCACAAACCTGCCT+AGG - chr7.3:5411047-5411066 MS.gene072694:intron 45.0%
CAGAAAAAAAGGCCAGCAAC+AGG - chr7.3:5409929-5409948 MS.gene072694:intron 45.0%
CGTTAAGGTTGTCGCGATTT+CGG - chr7.3:5410377-5410396 MS.gene072694:intron 45.0%
CTTTGGATTCTCTTGCCACT+TGG + chr7.3:5409499-5409518 None:intergenic 45.0%
GCAAGATCTTAAAACAGGGC+CGG + chr7.3:5410150-5410169 None:intergenic 45.0%
GGACGCTGCGATACAAATAA+CGG - chr7.3:5410407-5410426 MS.gene072694:intron 45.0%
GGATATGGAGAGCCTTTGAT+TGG + chr7.3:5409086-5409105 None:intergenic 45.0%
GTTAGTGTCAGTGTCGTCTT+CGG + chr7.3:5409183-5409202 None:intergenic 45.0%
GTTTGTGTTAGCACTTCCCA+AGG - chr7.3:5410320-5410339 MS.gene072694:intron 45.0%
TATAGGTGCAGCACATGCAA+GGG - chr7.3:5411666-5411685 MS.gene072694:intron 45.0%
TCAAAGGCTCTCCATATCCA+AGG - chr7.3:5409087-5409106 MS.gene072694:CDS 45.0%
TTATAGGTGCAGCACATGCA+AGG - chr7.3:5411665-5411684 MS.gene072694:intron 45.0%
TTCCAACGAATTTGGAGGCT+CGG - chr7.3:5409719-5409738 MS.gene072694:intron 45.0%
! AAAGATTTGAGATGCCTGGC+TGG - chr7.3:5411317-5411336 MS.gene072694:intron 45.0%
! AGCTAAATTTGTGGTGGAGG+AGG + chr7.3:5411793-5411812 None:intergenic 45.0%
! TATTTCAAGTGCCAAGCACC+AGG - chr7.3:5409821-5409840 MS.gene072694:intron 45.0%
! TTTGCCTTTTAGTGCACTCC+TGG + chr7.3:5409842-5409861 None:intergenic 45.0%
!! AACTGCAATAGGAAGTGCCA+AGG + chr7.3:5411613-5411632 None:intergenic 45.0%
!! CTGCCGATACCGATTTGTAA+CGG - chr7.3:5411555-5411574 MS.gene072694:intron 45.0%
!! GCTGTTTCGGTATTTTGGGA+GGG + chr7.3:5409999-5410018 None:intergenic 45.0%
!! GGAAGTGCTAACACAAACAC+GGG + chr7.3:5410318-5410337 None:intergenic 45.0%
!! GGGAAGTGCTAACACAAACA+CGG + chr7.3:5410319-5410338 None:intergenic 45.0%
!! TGTTGGTGGTATGTCAGTGA+CGG - chr7.3:5409260-5409279 MS.gene072694:CDS 45.0%
!! TTACAAATCGGTATCGGCAG+TGG + chr7.3:5411555-5411574 None:intergenic 45.0%
!! TTTTTGGAGGCCCATACCTT+GGG - chr7.3:5410085-5410104 MS.gene072694:intron 45.0%
!!! GCGACCGTTTTTTAGAACCT+TGG + chr7.3:5410340-5410359 None:intergenic 45.0%
!!! TGCTGTTTCGGTATTTTGGG+AGG + chr7.3:5410000-5410019 None:intergenic 45.0%
!!! TTTTTTGGAGGCCCATACCT+TGG - chr7.3:5410084-5410103 MS.gene072694:intron 45.0%
ACCAAAGCAAACAGCGGCAA+AGG - chr7.3:5409900-5409919 MS.gene072694:intron 50.0%
ACGGGACGTTACCGCAAAAA+CGG + chr7.3:5411581-5411600 None:intergenic 50.0%
ACGGTTGTGACTGTGAGGAT+TGG - chr7.3:5408987-5409006 MS.gene072694:CDS 50.0%
ATCGCAAATCGCAAGCAGGA+AGG - chr7.3:5411221-5411240 MS.gene072694:intron 50.0%
ATCTCCAACACACTGCTCAG+AGG - chr7.3:5412010-5412029 MS.gene072694:CDS 50.0%
ATGTCCTCTGAGCAGTGTGT+TGG + chr7.3:5412017-5412036 None:intergenic 50.0%
CAAATCGCAAGCAGGAAGGA+AGG - chr7.3:5411225-5411244 MS.gene072694:intron 50.0%
CAGAATCGCAAATCGCAAGC+AGG - chr7.3:5411217-5411236 MS.gene072694:intron 50.0%
CGGCCGTTACAAATCGGTAT+CGG + chr7.3:5411561-5411580 None:intergenic 50.0%
CTGCTTGCGATTTGCGATTC+TGG + chr7.3:5411219-5411238 None:intergenic 50.0%
GTTCGTTCTGCTTGCGATTC+TGG + chr7.3:5411195-5411214 None:intergenic 50.0%
TCCTTTGCCGCTGTTTGCTT+TGG + chr7.3:5409904-5409923 None:intergenic 50.0%
TCTCCTGTTCTTCTGTTGCG+CGG - chr7.3:5411425-5411444 MS.gene072694:intron 50.0%
TGTCGCGATTTCGGCTGTAA+CGG - chr7.3:5410386-5410405 MS.gene072694:intron 50.0%
TTCTGACTCAAGTTTGGGGG+AGG + chr7.3:5408773-5408792 None:intergenic 50.0%
TTTAGTGCACTCCTGGTGCT+TGG + chr7.3:5409835-5409854 None:intergenic 50.0%
! AATTTGTGGTGGAGGAGGAG+AGG + chr7.3:5411788-5411807 None:intergenic 50.0%
! ACGCAAGCAGAAGTGCAGAA+CGG - chr7.3:5411072-5411091 MS.gene072694:intron 50.0%
! AGCACCAGGAGTGCACTAAA+AGG - chr7.3:5409835-5409854 MS.gene072694:intron 50.0%
! ATTTGTGGTGGAGGAGGAGA+GGG + chr7.3:5411787-5411806 None:intergenic 50.0%
!! GGTATGTTAGTGGGGGTACT+AGG - chr7.3:5410052-5410071 MS.gene072694:intron 50.0%
!! TCGGTGCCGGAAGTAAAATG+AGG - chr7.3:5409738-5409757 MS.gene072694:intron 50.0%
!! TTTTGGAGGCCCATACCTTG+GGG - chr7.3:5410086-5410105 MS.gene072694:intron 50.0%
AAACGCCGTTACGGCCGTTA+CGG + chr7.3:5411483-5411502 None:intergenic 55.0%
ACGGCATTTCGCGGTCGTAA+CGG - chr7.3:5411453-5411472 MS.gene072694:intron 55.0%
CACCGAGCCTCCAAATTCGT+TGG + chr7.3:5409724-5409743 None:intergenic 55.0%
CACTGAACCTGTGGTCCAAG+TGG - chr7.3:5409481-5409500 MS.gene072694:intron 55.0%
CACTTCTGCTTGCGTCTCCT+AGG + chr7.3:5411067-5411086 None:intergenic 55.0%
CAGGGCCGTTCCAACGAATT+TGG - chr7.3:5409711-5409730 MS.gene072694:intron 55.0%
CTCCTGTTCTTCTGTTGCGC+GGG - chr7.3:5411426-5411445 MS.gene072694:intron 55.0%
GGCCGTTCCAACGAATTTGG+AGG - chr7.3:5409714-5409733 MS.gene072694:intron 55.0%
GTCGTAACGGCGTTCCGTAA+CGG - chr7.3:5411466-5411485 MS.gene072694:intron 55.0%
TTAAAACAGGGCCGGACCCT+GGG + chr7.3:5410142-5410161 None:intergenic 55.0%
! TCTCTTGCCACTTGGACCAC+AGG + chr7.3:5409491-5409510 None:intergenic 55.0%
ACCAGGCCTCCCCAAGGTAT+GGG + chr7.3:5410098-5410117 None:intergenic 60.0%
AGAGGGCTGTGGGATCTGGA+TGG + chr7.3:5411770-5411789 None:intergenic 60.0%
CTTAAAACAGGGCCGGACCC+TGG + chr7.3:5410143-5410162 None:intergenic 60.0%
CTTCTGTTGCGCGGGCGTAA+CGG - chr7.3:5411434-5411453 MS.gene072694:intron 60.0%
GCAAGCAGCGCTATAGCACC+AGG + chr7.3:5410115-5410134 None:intergenic 60.0%
GCGTTCCGTAACGGCCGTAA+CGG - chr7.3:5411475-5411494 MS.gene072694:intron 60.0%
TAAAACAGGGCCGGACCCTG+GGG + chr7.3:5410141-5410160 None:intergenic 60.0%
TATAGCACCAGGCCTCCCCA+AGG + chr7.3:5410104-5410123 None:intergenic 60.0%
TCTGCTTGCGTCTCCTAGGC+AGG + chr7.3:5411063-5411082 None:intergenic 60.0%
!! CGAATTTGGAGGCTCGGTGC+CGG - chr7.3:5409725-5409744 MS.gene072694:intron 60.0%
AAAACAGGGCCGGACCCTGG+GGG + chr7.3:5410140-5410159 None:intergenic 65.0%
CACCAGGCCTCCCCAAGGTA+TGG + chr7.3:5410099-5410118 None:intergenic 65.0%
CGCCCGCGCAACAGAAGAAC+AGG + chr7.3:5411431-5411450 None:intergenic 65.0%
GAGGAGAGGGCTGTGGGATC+TGG + chr7.3:5411774-5411793 None:intergenic 65.0%
GCGGGCGTAACGGCATTTCG+CGG - chr7.3:5411444-5411463 MS.gene072694:intron 65.0%
GTGGAGGAGGAGAGGGCTGT+GGG + chr7.3:5411780-5411799 None:intergenic 65.0%
TCGCGATCGCGGTCGCGTTA+AGG - chr7.3:5410362-5410381 MS.gene072694:intron 65.0%
TGGAGGCCCATACCTTGGGG+AGG - chr7.3:5410089-5410108 MS.gene072694:intron 65.0%
AAACAGGGCCGGACCCTGGG+GGG + chr7.3:5410139-5410158 None:intergenic 70.0%
AACGGTCGCGGTCGCGATCG+CGG - chr7.3:5410351-5410370 MS.gene072694:intron 70.0%
AGCGCTGCTTGCACCCCCCA+GGG - chr7.3:5410123-5410142 MS.gene072694:intron 70.0%
GCCCATACCTTGGGGAGGCC+TGG - chr7.3:5410094-5410113 MS.gene072694:intron 70.0%
GGTGGAGGAGGAGAGGGCTG+TGG + chr7.3:5411781-5411800 None:intergenic 70.0%
TAGCGCTGCTTGCACCCCCC+AGG - chr7.3:5410122-5410141 MS.gene072694:intron 70.0%
TGCTTGCACCCCCCAGGGTC+CGG - chr7.3:5410128-5410147 MS.gene072694:intron 70.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 5408757 5412274 5408757 ID=MS.gene072694
chr7.3 mRNA 5408757 5412274 5408757 ID=MS.gene072694.t1;Parent=MS.gene072694
chr7.3 exon 5412195 5412274 5412195 ID=MS.gene072694.t1.exon1;Parent=MS.gene072694.t1
chr7.3 CDS 5412195 5412274 5412195 ID=cds.MS.gene072694.t1;Parent=MS.gene072694.t1
chr7.3 exon 5411923 5412060 5411923 ID=MS.gene072694.t1.exon2;Parent=MS.gene072694.t1
chr7.3 CDS 5411923 5412060 5411923 ID=cds.MS.gene072694.t1;Parent=MS.gene072694.t1
chr7.3 exon 5408757 5409372 5408757 ID=MS.gene072694.t1.exon3;Parent=MS.gene072694.t1
chr7.3 CDS 5408757 5409372 5408757 ID=cds.MS.gene072694.t1;Parent=MS.gene072694.t1
Gene Sequence

>MS.gene072694

ATGGACAGTAATGCCTCCCCCAAACTTGAGTCAGAAACATCTTTAGAGCTCAAACCAGAATCTCAAGTATCTAAGAAACGGTGAGTTTTGCTTAGAACATAGAGTTCTGATATTTGGTTTGGTTACTAGCATGTTTTTAAATTTTCTAGTTTTTGGTAAAGTAGTGATGTTTCTAGCTAGCTTGCATGTTTTATATATGTTGTGCATGTCTCAGGAAAATGGTTGAGAAAACGGTTGTGACTGTGAGGATTGGAGAGAATGTTAGCAAGGTGAAGAATGAAGGACTTCCTTCAGATTTTTGGTCTTGGAGGAAATATGGACAAAAACCAATCAAAGGCTCTCCATATCCAAGGTGTGCATTCTTTCCACTAGATATGATAATCATCATGATGATGTTCATTAATTGAATCACATATATGGACACCGAAGACGACACTGACACTAACATTTACAAACATCGTTCATAATTTAAGAAAATTAAAATGATTGAATGTCACTACATGTGTTGGTGGTATGTCAGTGACGGACATTCATTTAATCTGAAGTGCGATGCTTGTTTTTATGAACTTTCATATATTATGATGTGATAATTTGTTCTTTTTTTTATGAACAAAATAACAAAAATGATCGATTTATTGCCTCATATCTCTTTTTAGTTACAACTATTCATAGAAATATATTCTGACAGAATCAATAGGGGTATATTAATTTATCCAACTAGAGTCACTGAACCTGTGGTCCAAGTGGCAAGAGAATCCAAAGAAGTTTCTTAATGTGACTCAAATACAAAACAAACTGATTCATTCAGCTTATACACAATACTAATACAAGCTTGGTCACAAAAATACAAAACAAACTGTTTCAAATACACAGTTAATATACATGCTAAATTTAAGCCATGTCTTGATATAAGGACAATTACTCATAGAAATTGGCCTTAGAGATGTTTTAAGACAGGGCCGTTCCAACGAATTTGGAGGCTCGGTGCCGGAAGTAAAATGAGGCTCATTCATACAATGTGTTTTGGAAAGGGGAAAACGCTAATTTTTTTTTGAAACTGCATATATTTCAAGTGCCAAGCACCAGGAGTGCACTAAAAGGCAAACTGTTACAACAGATAAAATAAGGTGCCCAGCCTACTATACCAAAGCAAACAGCGGCAAAGGACACAGCAGAAAAAAAGGCCAGCAACAGGAAAGAAACCAAAAAGCCATACACCAAAAGAAAAATAAACAAAATCCCTCCCAAAATACCGAAACAGCAATAGCAAAGCATGCTACAACAGTATAGGAACTGGTATGTTAGTGGGGGTACTAGGCTGTAAATATTTTTTGGAGGCCCATACCTTGGGGAGGCCTGGTGCTATAGCGCTGCTTGCACCCCCCAGGGTCCGGCCCTGTTTTAAGATCTTGCATGTAAGACAGCATTCTTGTAATTAGAACATTTCCAACTCAAGTTTTTATGATATTTTGTATAAGAACCACATGTGGTTATATTCAAAAATTTCATTTTCTCAAATTAATATTGGTGTCGAGACTTGTCAATATTAGTATCGTGTCCCGTGTTTGTGTTAGCACTTCCCAAGGTTCTAAAAAACGGTCGCGGTCGCGATCGCGGTCGCGTTAAGGTTGTCGCGATTTCGGCTGTAACGGACGCTGCGATACAAATAACGGTCTTCGCGGTGTGAATTAATCAAAACGTTTCACAAAACGTATTAAAACTATTTATATTATCATATAATGTATAATAACTTAGATTAATACTTTTTTTCCATAATTATAACATGTTTAAAGTAAATATAATAATAAAAATAGACTACATTTAGTAAAGATAGAGTGTTTGACAGATTGAAAAGAAATTAACTAATAAATAACTACTCATAACATATCTTTAAACAAAGTTCATGATCTAACATCAAAGTCCCAATTTTTTCTCTAAAATTTCATCTAATATTTGTTACCTAAATACTCAAATTAAGAGTGTCAATTTAAAATTACCTTGAACTTAAATAAGAGATGAATGCACACTTCTTTTTTTTTTTGAGTTTAATAAATAAATATATGAATAAACAAATAAACCATCTAAAAGTAATTATTAATTTCCTTCAAAAAAAAGTAATTATTAATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTAATTGATTATTATTGAATGAAGAGTGAAGTTGTGTGTGTGCATACGTGTGTGTATTGTGATAAAACCTTATTCGCTCAAAAAACAAAAAATACTTATCACTTATCACAAACCTGCCTAGGAGACGCAAGCAGAAGTGCAGAACGGCAAGCAGAGAGACGCAAGCAGAAGTGCAGAACGAACAAAGAAACGCAAGCAGAACGAACAAAGAATCGCAAATCGCAAATCGCAAAAGAATCACACACCAGAATCGCAAGCAGAACGAACACCAGAATCGCAAATCGCAAGCAGGAAGGAAGGAACAAAGAATCACACCACCAAAGAAGAGAAGTAATTGATTTGTGTAAAAAAGATTTGAGATGTGGTACAAAAGATTTGAGATGCCTGGCTGGTACAAAAGATAAGATTCCTCTTCCCCTGTTCTTGTATTTTTGTGGTTTTTTTTTTTAATTTGAGATTTGAGATGCCTGTCCTTCTTCTCCTGTTCTTCTGTTGCGCGGGCGTAACGGCATTTCGCGGTCGTAACGGCGTTCCGTAACGGCCGTAACGGCGTTTTTTCTGTGAATTTCTTTCTCAGCGTTAAAAGGGGCAAAAACGGTAACGGCCACTGCCGATACCGATTTGTAACGGCCGTTTTTGCGGTAACGTCCCGTTTTTTAAAACCTTGGCACTTCCTATTGCAGTTTGTTTAATGTTGGTACAAATCTACAGGGGATATTATAGGTGCAGCACATGCAAGGGCTGTTCAGCCAAAAAACAAGTAGAGAGAAGCAGCACAGATGCTTCATTGCTCATCATCACCTATACTTCAACACATAACCATCCAGATCCCACAGCCCTCTCCTCCTCCACCACAAATTTAGCTCAACGACCAAAAGAATCCGAAACCGAAACAACCAAAGATCTCCCAGTTACTTCTAAGGAAGAAAACCAAGAACAGAAACAGATAGATTCTAAGGAAGAAAACCAAGAACAGAAACAGATAGAAGAGGAAATTAACAGTAATAAGAGCACTGTGAGTAGTGATCAAGTTACAAATGAAGAAAATTTTCATTACTTACAATCTCCAACACACTGCTCAGAGGACATCATTATAGACCAAGAAGATCCTTTCAAAGTAAATATGGAAAAAAGCCACATTGACAAAATAGATCTTCTCTTAGAGGAAGAGCCACTCTGCTATGCACAGTTAAAGAATTTGTCAGCATCTAAATCAGAAGAACTTGATTTTTTCGATGAACTTGAGGAGTTACCTATGTCTTCATCTATTTTGCACTTTACGAGGAGCATTTTTTCTGATGAAAGGATTCCTGTTGCCCCTTCTTGA
Protein sequence

>MS.gene072694.t1

MDSNASPKLESETSLELKPESQVSKKRKMVEKTVVTVRIGENVSKVKNEGLPSDFWSWRKYGQKPIKGSPYPRGYYRCSTCKGCSAKKQVERSSTDASLLIITYTSTHNHPDPTALSSSTTNLAQRPKESETETTKDLPVTSKEENQEQKQIDSKEENQEQKQIEEEINSNKSTVSSDQVTNEENFHYLQSPTHCSEDIIIDQEDPFKVNMEKSHIDKIDLLLEEEPLCYAQLKNLSASKSEELDFFDELEELPMSSSILHFTRSIFSDERIPVAPS