AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene072696

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072696.t1 MTR_7g109560 91.523 637 46 3 1 634 133 764 0.0 1157
MS.gene072696.t1 MTR_7g055660 55.016 618 254 11 31 630 119 730 0.0 657
MS.gene072696.t1 MTR_1g086980 59.036 415 153 7 225 631 223 628 1.35e-162 480
MS.gene072696.t1 MTR_1g086980 55.285 123 50 1 108 225 2 124 1.46e-34 139
MS.gene072696.t1 MTR_1g086980 59.036 415 153 7 225 631 351 756 2.01e-161 481
MS.gene072696.t1 MTR_1g086980 50.435 230 107 2 1 225 25 252 6.90e-66 230
MS.gene072696.t1 MTR_1g086980 59.036 415 153 7 225 631 372 777 2.08e-161 482
MS.gene072696.t1 MTR_1g086980 50.435 230 107 2 1 225 46 273 7.88e-66 231
MS.gene072696.t1 MTR_1g086980 59.036 415 153 7 225 631 403 808 2.58e-161 483
MS.gene072696.t1 MTR_1g086980 50.435 230 107 2 1 225 77 304 1.38e-65 230
MS.gene072696.t1 MTR_1g086980 59.036 415 153 7 225 631 413 818 4.26e-161 483
MS.gene072696.t1 MTR_1g086980 50.435 230 107 2 1 225 87 314 2.00e-65 230
MS.gene072696.t1 MTR_1g086980 59.036 415 153 7 225 631 423 828 4.47e-161 483
MS.gene072696.t1 MTR_1g086980 50.435 230 107 2 1 225 97 324 1.48e-65 231
MS.gene072696.t1 MTR_1g086980 59.207 353 130 5 225 569 413 759 5.02e-135 413
MS.gene072696.t1 MTR_1g086980 50.435 230 107 2 1 225 87 314 6.04e-66 231
MS.gene072696.t1 MTR_5g016870 56.233 377 157 5 259 630 488 861 2.08e-133 412
MS.gene072696.t1 MTR_5g016870 42.254 213 118 1 12 219 126 338 2.66e-47 179
MS.gene072696.t1 MTR_1g086980 56.098 287 112 5 225 503 351 631 1.84e-95 307
MS.gene072696.t1 MTR_1g086980 50.435 230 107 2 1 225 25 252 4.14e-67 231
MS.gene072696.t1 MTR_1g086980 56.098 287 112 5 225 503 413 693 6.46e-95 307
MS.gene072696.t1 MTR_1g086980 50.435 230 107 2 1 225 87 314 2.00e-66 231
MS.gene072696.t1 MTR_1g086980 54.622 238 94 5 225 454 413 644 2.39e-70 240
MS.gene072696.t1 MTR_1g086980 50.435 230 107 2 1 225 87 314 1.70e-66 230
MS.gene072696.t1 MTR_8g064240 71.765 85 24 0 545 629 1 85 1.15e-36 132
MS.gene072696.t1 MTR_8g064320 89.394 66 7 0 567 632 7 72 1.48e-35 130
MS.gene072696.t1 MTR_8g064250 89.062 64 7 0 569 632 7 70 6.39e-34 125
MS.gene072696.t1 MTR_8g064310 85.000 60 9 0 570 629 8 67 9.85e-30 112
MS.gene072696.t1 MTR_2g036060 34.783 138 87 2 463 598 1014 1150 1.04e-19 94.4
MS.gene072696.t1 MTR_2g036060 34.783 138 87 2 463 598 1039 1175 1.04e-19 94.4
MS.gene072696.t1 MTR_7g021365 35.537 121 75 2 481 598 904 1024 2.48e-17 86.7
MS.gene072696.t1 MTR_1g008230 34.711 121 75 3 482 599 614 733 2.14e-15 80.5
MS.gene072696.t1 MTR_1g098370 38.532 109 65 1 493 599 109 217 2.27e-15 79.7
MS.gene072696.t1 MTR_8g027725 33.613 119 77 2 483 599 808 926 2.84e-15 80.1
MS.gene072696.t1 MTR_8g027725 33.613 119 77 2 483 599 793 911 2.92e-15 80.1
MS.gene072696.t1 MTR_1g008230 34.711 121 75 3 482 599 892 1011 4.84e-15 79.3
MS.gene072696.t1 MTR_1g098000 38.532 109 65 1 493 599 106 214 5.10e-15 78.6
MS.gene072696.t1 MTR_0071s0100 31.325 166 103 4 436 598 171 328 9.17e-15 77.0
MS.gene072696.t1 MTR_7g117355 32.520 123 81 2 483 603 823 945 3.87e-14 76.6
MS.gene072696.t1 MTR_3g091310 32.773 119 78 2 483 599 922 1040 4.40e-14 76.3
MS.gene072696.t1 MTR_3g091310 32.773 119 78 2 483 599 828 946 4.45e-14 76.3
MS.gene072696.t1 MTR_3g088625 32.576 132 87 1 469 598 1311 1442 4.67e-13 73.2
MS.gene072696.t1 MTR_3g088625 32.576 132 87 1 469 598 1205 1336 4.67e-13 73.2
MS.gene072696.t1 MTR_1g012910 29.921 127 80 2 488 605 532 658 8.84e-13 72.0
MS.gene072696.t1 MTR_1g012910 29.921 127 80 2 488 605 369 495 1.12e-12 71.2
MS.gene072696.t1 MTR_1g012890 28.125 128 86 1 478 599 219 346 4.94e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072696.t1 AT4G02020 59.008 383 144 5 258 633 479 855 3.62e-151 458
MS.gene072696.t1 AT4G02020 45.022 231 113 4 1 225 92 314 1.49e-50 188
MS.gene072696.t1 AT2G23380 51.422 422 170 6 238 630 258 673 1.81e-134 409
MS.gene072696.t1 AT2G23380 43.182 88 46 2 133 219 7 91 5.59e-15 79.0
MS.gene072696.t1 AT2G23380 51.422 422 170 6 238 630 485 900 9.70e-133 412
MS.gene072696.t1 AT2G23380 42.574 202 112 2 19 219 120 318 2.07e-42 164
MS.gene072696.t1 AT1G02580 41.463 574 292 11 32 598 124 660 2.03e-132 404
MS.gene072696.t1 AT4G02020 60.312 320 117 3 258 570 479 795 1.95e-129 400
MS.gene072696.t1 AT4G02020 45.022 231 113 4 1 225 92 314 6.95e-51 189
MS.gene072696.t1 AT4G02020 57.929 309 118 4 258 557 479 784 7.89e-114 359
MS.gene072696.t1 AT4G02020 45.022 231 113 4 1 225 92 314 6.64e-51 189
MS.gene072696.t1 AT4G02020 57.929 309 118 4 258 557 479 784 7.89e-114 359
MS.gene072696.t1 AT4G02020 45.022 231 113 4 1 225 92 314 6.64e-51 189
MS.gene072696.t1 AT1G02580 38.037 489 257 12 16 497 110 559 8.19e-88 285
MS.gene072696.t1 AT5G42400 36.567 134 82 2 467 598 1235 1367 5.92e-21 98.6
MS.gene072696.t1 AT5G42400 36.567 134 82 2 467 598 1235 1367 5.92e-21 98.6
MS.gene072696.t1 AT5G42400 36.567 134 82 2 467 598 1235 1367 5.92e-21 98.6
MS.gene072696.t1 AT5G42400 36.567 134 82 2 467 598 1235 1367 5.92e-21 98.6
MS.gene072696.t1 AT5G42400 36.567 134 82 2 467 598 1235 1367 5.92e-21 98.6
MS.gene072696.t1 AT5G42400 36.567 134 82 2 467 598 1235 1367 5.92e-21 98.6
MS.gene072696.t1 AT5G42400 36.567 134 82 2 467 598 1235 1367 5.92e-21 98.6
MS.gene072696.t1 AT5G42400 36.567 134 82 2 467 598 1235 1367 5.92e-21 98.6
MS.gene072696.t1 AT2G31650 36.364 121 74 2 481 598 897 1017 1.68e-18 90.5
MS.gene072696.t1 AT4G30860 39.024 123 71 2 479 598 323 444 3.17e-17 85.5
MS.gene072696.t1 AT1G76710 40.367 109 63 1 493 599 100 208 1.99e-16 83.2
MS.gene072696.t1 AT1G05830 33.884 121 77 2 481 598 918 1038 2.02e-16 84.0
MS.gene072696.t1 AT1G05830 33.884 121 77 2 481 598 918 1038 2.02e-16 84.0
MS.gene072696.t1 AT1G05830 33.884 121 77 2 481 598 918 1038 2.02e-16 84.0
MS.gene072696.t1 AT1G05830 33.884 121 77 2 481 598 918 1038 2.02e-16 84.0
MS.gene072696.t1 AT1G76710 40.367 109 63 1 493 599 100 208 2.40e-16 82.8
MS.gene072696.t1 AT1G76710 40.367 109 63 1 493 599 100 208 2.40e-16 82.8
MS.gene072696.t1 AT1G76710 40.367 109 63 1 493 599 100 208 2.56e-16 82.8
MS.gene072696.t1 AT4G27910 34.454 119 76 2 483 599 886 1004 5.37e-15 79.3
MS.gene072696.t1 AT5G53430 34.167 120 77 2 482 599 901 1020 1.06e-14 78.6
MS.gene072696.t1 AT1G77300 36.090 133 81 2 469 598 1013 1144 2.38e-13 74.3
MS.gene072696.t1 AT1G77300 36.090 133 81 2 469 598 1013 1144 3.43e-13 73.6
MS.gene072696.t1 AT3G61740 30.000 120 81 2 483 599 840 959 8.31e-13 72.4
MS.gene072696.t1 AT3G61740 30.000 120 81 2 483 599 876 995 1.17e-12 72.0
MS.gene072696.t1 AT3G59960 31.967 122 81 2 479 598 108 229 4.20e-12 67.8
MS.gene072696.t1 AT3G59960 31.967 122 81 2 479 598 108 229 4.20e-12 67.8
MS.gene072696.t1 AT3G59960 31.967 122 81 2 479 598 108 229 4.20e-12 67.8
MS.gene072696.t1 AT3G59960 31.967 122 81 2 479 598 108 229 6.68e-12 67.8

Find 106 sgRNAs with CRISPR-Local

Find 216 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTATATTTGTCAGATTCTT+TGG 0.176923 7.3:+5436661 MS.gene072696:intron
CTCTACGATCTTCATCATTT+TGG 0.203520 7.3:-5434382 None:intergenic
TTGTAGATTGTGTTTGTTAA+TGG 0.242431 7.3:+5437302 MS.gene072696:intron
TAGAAATGTTTGGGAGAAAT+AGG 0.261350 7.3:+5435002 MS.gene072696:CDS
CCGTATCATTCAAGTTAAAA+AGG 0.263836 7.3:-5436918 None:intergenic
TTGTATGAGGGGCTTAAATT+TGG 0.276488 7.3:+5434838 MS.gene072696:CDS
TCAGCGAGAGCACTGTTTCT+TGG 0.281828 7.3:-5437486 None:intergenic
TCAACCCGATCATCAAGTTT+TGG 0.284315 7.3:+5433375 MS.gene072696:CDS
CCTTCAGGTTCTTGCCAAAC+TGG 0.285004 7.3:-5434755 None:intergenic
CATGGATCCATGGACGAAAA+TGG 0.290421 7.3:+5435196 MS.gene072696:CDS
CATGGTTCTCTGGGACCTTC+AGG 0.309857 7.3:-5434770 None:intergenic
TGGATGGGGAGCTTTCTTAA+AGG 0.310146 7.3:+5436701 MS.gene072696:CDS
TCTTTCGGATTGGAAACTTT+TGG 0.327216 7.3:+5434955 MS.gene072696:CDS
TTGAAGGGAATAGAAATGTT+TGG 0.329797 7.3:+5434992 MS.gene072696:CDS
CTTGTGGACTTCCATCTAAA+TGG 0.334827 7.3:+5435725 MS.gene072696:CDS
TGTAGATTGTGTTTGTTAAT+GGG 0.343535 7.3:+5437303 MS.gene072696:intron
GTCATCACCACATGGTTCTC+TGG 0.363244 7.3:-5434780 None:intergenic
TGGGCAAGGTCTGATGTTGC+TGG 0.366049 7.3:+5436681 MS.gene072696:CDS
AGGTACCAGTTCAGAAATTC+AGG 0.366551 7.3:+5434173 MS.gene072696:CDS
AAGGTCTGATGTTGCTGGAT+GGG 0.377084 7.3:+5436686 MS.gene072696:CDS
GTATATTTGTCAGATTCTTT+GGG 0.380194 7.3:+5436662 MS.gene072696:intron
TGAAGGGAATAGAAATGTTT+GGG 0.387527 7.3:+5434993 MS.gene072696:CDS
ACCATGGCTACATAAACTTC+TGG 0.394000 7.3:+5437415 MS.gene072696:CDS
AAATGTATCCAAGACGTATA+TGG 0.398309 7.3:-5433463 None:intergenic
TTGTGACATCTTTATTATGA+AGG 0.413196 7.3:-5434808 None:intergenic
TTGATGATCGGGTTGATGAT+TGG 0.418627 7.3:-5433368 None:intergenic
CAAGGTCTGATGTTGCTGGA+TGG 0.418842 7.3:+5436685 MS.gene072696:CDS
TGTTGGATCATCATCTTCCT+TGG 0.421957 7.3:-5437447 None:intergenic
GGAGGAGTCTACTACTCTTT+CGG 0.427997 7.3:+5434940 MS.gene072696:CDS
AGTTCGAAAAGCAACCAGTT+TGG 0.430460 7.3:+5434741 MS.gene072696:intron
TCACAATTAGTAATTGTATG+AGG 0.430536 7.3:+5434825 MS.gene072696:CDS
AGGTCTGATGTTGCTGGATG+GGG 0.436683 7.3:+5436687 MS.gene072696:CDS
TCTCCCAAAACTTGATGATC+GGG 0.437642 7.3:-5433379 None:intergenic
TATGTCGAAATTGTTGGGTT+AGG 0.439250 7.3:+5436072 MS.gene072696:CDS
TGATGATCGGGTTGATGATT+GGG 0.450857 7.3:-5433367 None:intergenic
CTCTCCCAAAACTTGATGAT+CGG 0.452457 7.3:-5433380 None:intergenic
CATTACCTGAATTTCTGAAC+TGG 0.453071 7.3:-5434178 None:intergenic
GCAAAGGAACACATTGAAGC+TGG 0.455412 7.3:+5437347 MS.gene072696:CDS
CACTTGTGTGACTCAATAGA+AGG 0.458241 7.3:+5434908 MS.gene072696:CDS
AAATGTATATTATGATCATC+AGG 0.462380 7.3:+5433706 MS.gene072696:CDS
CAACAATTTCGACATACATC+AGG 0.464497 7.3:-5436065 None:intergenic
AGGGTGAAGACCGATTTATT+AGG 0.467728 7.3:+5433804 MS.gene072696:CDS
AAATATTCTTCAAAATCTTG+TGG 0.468339 7.3:+5435709 MS.gene072696:CDS
TCAGGATGCCAAGCATCAAC+AGG 0.472001 7.3:+5433434 MS.gene072696:CDS
GGAAGTGTTGAGTATTGTTA+AGG 0.491359 7.3:+5434140 MS.gene072696:CDS
TTTGTCAATAGTTGTGGAGA+TGG 0.492244 7.3:+5436492 MS.gene072696:intron
ATCTTTGATTGTCCTTTGCA+CGG 0.496740 7.3:+5434608 MS.gene072696:CDS
GCATCAAAAGCTAATTGCTA+TGG 0.496913 7.3:+5437186 MS.gene072696:CDS
AAAACATGATGCTTCTTGTA+AGG 0.500417 7.3:+5436556 MS.gene072696:CDS
CTACATAAACTTCTGGATGA+TGG 0.506909 7.3:+5437422 MS.gene072696:CDS
ATGATCAAAAGTATCTAAAG+AGG 0.509607 7.3:-5434450 None:intergenic
CGTCTTGGATACATTTAGCC+AGG 0.511255 7.3:+5433470 MS.gene072696:CDS
AGTCTACTACTCTTTCGGAT+TGG 0.511550 7.3:+5434945 MS.gene072696:CDS
TTTGTCAGATTCTTTGGGCA+AGG 0.512971 7.3:+5436667 MS.gene072696:intron
CACAATTAGTAATTGTATGA+GGG 0.514622 7.3:+5434826 MS.gene072696:CDS
CAAAGGAACACATTGAAGCT+GGG 0.517669 7.3:+5437348 MS.gene072696:CDS
GTAGATTGTGTTTGTTAATG+GGG 0.518073 7.3:+5437304 MS.gene072696:intron
CTGATGTATGTCGAAATTGT+TGG 0.519505 7.3:+5436066 MS.gene072696:CDS
GGCATCCTGATACTTCTCAC+AGG 0.523294 7.3:-5433421 None:intergenic
TGATGTATGTCGAAATTGTT+GGG 0.532358 7.3:+5436067 MS.gene072696:CDS
TCATCACCACATGGTTCTCT+GGG 0.539476 7.3:-5434779 None:intergenic
GGTTACCTCCATATACGTCT+TGG 0.539814 7.3:+5433455 MS.gene072696:CDS
GTCAATGCCACATGGATCCA+TGG 0.545867 7.3:+5435186 MS.gene072696:CDS
TAGTTGTGGAGATGGTAACT+TGG 0.551130 7.3:+5436500 MS.gene072696:intron
ACATGGACATTGCTTTCCAC+AGG 0.551199 7.3:-5435818 None:intergenic
AAAAGCTAATTGCTATGGAA+AGG 0.554769 7.3:+5437191 MS.gene072696:CDS
TCTCTCGAAGCTGCAAAACA+TGG 0.560977 7.3:-5436035 None:intergenic
TCTTGTAAGGAAACAACAAA+AGG 0.562281 7.3:+5436569 MS.gene072696:CDS
ATGAGATGACATCGAGGTCA+AGG 0.562748 7.3:+5435653 MS.gene072696:CDS
AGTATTGTTAAGGATGTCAT+CGG 0.565880 7.3:+5434150 MS.gene072696:CDS
AGTTGTGGAGATGGTAACTT+GGG 0.568538 7.3:+5436501 MS.gene072696:intron
AGAAACAGTGCTCTCGCTGA+TGG 0.570720 7.3:+5437489 MS.gene072696:CDS
ACTTCTGGATGATGGTTCCA+AGG 0.574557 7.3:+5437430 MS.gene072696:CDS
TCCAGAAGTTTATGTAGCCA+TGG 0.577075 7.3:-5437416 None:intergenic
GGAGGTAACCTGTTGATGCT+TGG 0.585377 7.3:-5433442 None:intergenic
CATATAGAAGCTGATAAGCG+TGG 0.585855 7.3:+5436865 MS.gene072696:CDS
ACAATTAGTAATTGTATGAG+GGG 0.586473 7.3:+5434827 MS.gene072696:CDS
AATAGAAGGACAAGCTGAGG+AGG 0.588743 7.3:+5434922 MS.gene072696:CDS
AGGACGGTATTTGATGAACA+TGG 0.591105 7.3:+5434108 MS.gene072696:intron
GTATACTCCTTGTGAATGTG+AGG 0.594115 7.3:+5435792 MS.gene072696:CDS
CAAGAACTATTAAGAAGACA+TGG 0.596810 7.3:-5435835 None:intergenic
GTTAATGGGGATCATCGAGT+AGG 0.597741 7.3:+5437317 MS.gene072696:CDS
AACAATTTCGACATACATCA+GGG 0.601740 7.3:-5436064 None:intergenic
TGAAGAGTCAAACGAGCACA+AGG 0.605193 7.3:+5433760 MS.gene072696:CDS
GGAACACATTGAAGCTGGGG+AGG 0.615949 7.3:+5437352 MS.gene072696:CDS
TCGAGTAGGAATATTTGCAA+AGG 0.624767 7.3:+5437331 MS.gene072696:CDS
CTCAATAGAAGGACAAGCTG+AGG 0.630020 7.3:+5434919 MS.gene072696:CDS
AAAGGAACACATTGAAGCTG+GGG 0.641785 7.3:+5437349 MS.gene072696:CDS
CCAGTTTGGCAAGAACCTGA+AGG 0.643958 7.3:+5434755 MS.gene072696:CDS
TGTGAATGTGAGGGAGCCTG+TGG 0.648105 7.3:+5435802 MS.gene072696:CDS
GCTGAAGAGTCAATGCCACA+TGG 0.648318 7.3:+5435178 MS.gene072696:CDS
CAGGCTCCCTCACATTCACA+AGG 0.652042 7.3:-5435799 None:intergenic
GTATATTATGATCATCAGGA+AGG 0.661006 7.3:+5433710 MS.gene072696:CDS
TATACTCCTTGTGAATGTGA+GGG 0.663231 7.3:+5435793 MS.gene072696:CDS
TGTATCCAAGACGTATATGG+AGG 0.666836 7.3:-5433460 None:intergenic
TGATGAACATGGTTTAACTG+AGG 0.669808 7.3:+5434119 MS.gene072696:CDS
AGAGTCGTCTCATCGTGGAG+AGG 0.678757 7.3:+5436524 MS.gene072696:CDS
ATTGTTAAGGATGTCATCGG+AGG 0.690600 7.3:+5434153 MS.gene072696:CDS
TTGGGAGAGTCGTCTCATCG+TGG 0.699122 7.3:+5436519 MS.gene072696:CDS
AGGTAACAGTCATCACCACA+TGG 0.703610 7.3:-5434788 None:intergenic
TTGGGACTATAGAACTTACA+CGG 0.709896 7.3:-5433349 None:intergenic
ACGAAAATAGTCGACCACCA+TGG 0.710964 7.3:+5437399 MS.gene072696:CDS
AGAAGTTTATGTAGCCATGG+TGG 0.711973 7.3:-5437413 None:intergenic
AGGACAATGAGATGACATCG+AGG 0.791829 7.3:+5435647 MS.gene072696:intron
GAAGGTCCCAGAGAACCATG+TGG 0.793045 7.3:+5434773 MS.gene072696:CDS
GGACTATAGAACTTACACGG+TGG 0.797366 7.3:-5433346 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATTATTCATTGATAC+TGG - chr7.3:5434705-5434724 None:intergenic 15.0%
!! ACAAATATACAAATCAATTA+AGG - chr7.3:5436652-5436671 None:intergenic 15.0%
!! ATAATTAATTCAATTCTACA+AGG - chr7.3:5436338-5436357 None:intergenic 15.0%
!! ATATAAAAATATCAAGGAAA+AGG + chr7.3:5434358-5434377 MS.gene072696:CDS 15.0%
!! TTGTGACTATTTAATATATT+AGG + chr7.3:5434088-5434107 MS.gene072696:intron 15.0%
!!! TAACCATTTTTCTAATATTT+TGG + chr7.3:5435063-5435082 MS.gene072696:intron 15.0%
!!! TAATATAATGCTTTTAACTA+TGG + chr7.3:5436463-5436482 MS.gene072696:intron 15.0%
!!! TCAATGAATAATTAATTTGA+TGG + chr7.3:5434708-5434727 MS.gene072696:intron 15.0%
!!! TTTTGATTTACCTAATAAAT+CGG - chr7.3:5433817-5433836 None:intergenic 15.0%
!! AAATATTCTTCAAAATCTTG+TGG + chr7.3:5435709-5435728 MS.gene072696:CDS 20.0%
!! AAATGTATATTATGATCATC+AGG + chr7.3:5433706-5433725 MS.gene072696:CDS 20.0%
!! AAGCCAAAATATTAGAAAAA+TGG - chr7.3:5435069-5435088 None:intergenic 20.0%
!! ACTGAAAAAATTCATAGTAT+AGG - chr7.3:5437116-5437135 None:intergenic 20.0%
!! ATTCATAGTATAGGTTAATA+TGG - chr7.3:5437107-5437126 None:intergenic 20.0%
!! CAATGAAGAAAAAAATGATA+TGG + chr7.3:5434868-5434887 MS.gene072696:CDS 20.0%
!! GAAAAAGAATTATACTTGAA+GGG + chr7.3:5434977-5434996 MS.gene072696:CDS 20.0%
!! GACTATTTAATATATTAGGA+CGG + chr7.3:5434092-5434111 MS.gene072696:intron 20.0%
!! TCATATTATAGACAACAATA+TGG - chr7.3:5434543-5434562 None:intergenic 20.0%
!!! AAAAAATCATTTTTGTTTGC+TGG - chr7.3:5436817-5436836 None:intergenic 20.0%
!!! AAAAATCATTTTTGTTTGCT+GGG - chr7.3:5436816-5436835 None:intergenic 20.0%
!!! ATATGTAATACATATTTTGC+TGG + chr7.3:5433979-5433998 MS.gene072696:intron 20.0%
!!! ATGTTATTTTAGTAAACTAC+TGG + chr7.3:5435426-5435445 MS.gene072696:intron 20.0%
!!! CACAATAAGTATAAACTTTT+CGG - chr7.3:5434009-5434028 None:intergenic 20.0%
!!! GCAAACAAAAATGATTTTTT+AGG + chr7.3:5436817-5436836 MS.gene072696:CDS 20.0%
!!! TAAGTCATAAGTAATGTTTT+TGG + chr7.3:5436296-5436315 MS.gene072696:intron 20.0%
!!! TGTTATTTTAGTAAACTACT+GGG + chr7.3:5435427-5435446 MS.gene072696:intron 20.0%
! AAGAAATGAATGAAGAAACA+TGG - chr7.3:5434667-5434686 None:intergenic 25.0%
! ACAATTAGTAATTGTATGAG+GGG + chr7.3:5434827-5434846 MS.gene072696:CDS 25.0%
! AGATGACACAAATTTAACAT+AGG - chr7.3:5433608-5433627 None:intergenic 25.0%
! ATTGAATTGCAAATAATGTG+TGG + chr7.3:5437275-5437294 MS.gene072696:intron 25.0%
! CAAGATAATATGTTTAGTGA+AGG - chr7.3:5434071-5434090 None:intergenic 25.0%
! CACAATTAGTAATTGTATGA+GGG + chr7.3:5434826-5434845 MS.gene072696:CDS 25.0%
! CCAGAGAAAATAATACATAT+AGG - chr7.3:5436131-5436150 None:intergenic 25.0%
! CCTAAAAAATTTCATGTAAG+AGG - chr7.3:5433534-5433553 None:intergenic 25.0%
! GGAAAAAGAATTATACTTGA+AGG + chr7.3:5434976-5434995 MS.gene072696:CDS 25.0%
! GTATATTTGTCAGATTCTTT+GGG + chr7.3:5436662-5436681 MS.gene072696:intron 25.0%
! TAGTACTTAATTCAAGTACA+AGG - chr7.3:5436225-5436244 None:intergenic 25.0%
! TATTATAGACAACAATATGG+TGG - chr7.3:5434540-5434559 None:intergenic 25.0%
! TCACAATTAGTAATTGTATG+AGG + chr7.3:5434825-5434844 MS.gene072696:CDS 25.0%
! TGAAGAAAAAAATGATATGG+AGG + chr7.3:5434871-5434890 MS.gene072696:CDS 25.0%
! TGTATATTTGTCAGATTCTT+TGG + chr7.3:5436661-5436680 MS.gene072696:intron 25.0%
! TTGTGACATCTTTATTATGA+AGG - chr7.3:5434811-5434830 None:intergenic 25.0%
!! AATAAGTATAAACTTTTCGG+AGG - chr7.3:5434006-5434025 None:intergenic 25.0%
!! ATAATTGTTTTCCATCGAAA+AGG - chr7.3:5435906-5435925 None:intergenic 25.0%
!! CCTATATGTATTATTTTCTC+TGG + chr7.3:5436128-5436147 MS.gene072696:intron 25.0%
!! GTATTATTTTCTCTGGTAAA+GGG + chr7.3:5436135-5436154 MS.gene072696:intron 25.0%
!! TATTATTTTCTCTGGTAAAG+GGG + chr7.3:5436136-5436155 MS.gene072696:intron 25.0%
!! TGTAGATTGTGTTTGTTAAT+GGG + chr7.3:5437303-5437322 MS.gene072696:intron 25.0%
!! TGTATTATTTTCTCTGGTAA+AGG + chr7.3:5436134-5436153 MS.gene072696:intron 25.0%
!! TTAATTATGTTCCTTTTCGA+TGG + chr7.3:5435892-5435911 MS.gene072696:intron 25.0%
!! TTGTAGATTGTGTTTGTTAA+TGG + chr7.3:5437302-5437321 MS.gene072696:intron 25.0%
!!! AAAATCATTTTTGTTTGCTG+GGG - chr7.3:5436815-5436834 None:intergenic 25.0%
!!! ATCGTCAAATTGTTTTTGAA+TGG + chr7.3:5435613-5435632 MS.gene072696:intron 25.0%
!!! ATGATCAAAAGTATCTAAAG+AGG - chr7.3:5434453-5434472 None:intergenic 25.0%
!!! CATTTTTTTGTCAATAGTTG+TGG + chr7.3:5436486-5436505 MS.gene072696:intron 25.0%
!!! CCTCTTACATGAAATTTTTT+AGG + chr7.3:5433531-5433550 MS.gene072696:intron 25.0%
!!! CCTTTTTAACTTGAATGATA+CGG + chr7.3:5436918-5436937 MS.gene072696:CDS 25.0%
!!! GTTATTTTAGTAAACTACTG+GGG + chr7.3:5435428-5435447 MS.gene072696:intron 25.0%
!!! TCGTCAAATTGTTTTTGAAT+GGG + chr7.3:5435614-5435633 MS.gene072696:intron 25.0%
!!! TTATTTTAGTAAACTACTGG+GGG + chr7.3:5435429-5435448 MS.gene072696:intron 25.0%
AAAACATGATGCTTCTTGTA+AGG + chr7.3:5436556-5436575 MS.gene072696:CDS 30.0%
AAAAGCTAATTGCTATGGAA+AGG + chr7.3:5437191-5437210 MS.gene072696:CDS 30.0%
AAATGTATCCAAGACGTATA+TGG - chr7.3:5433466-5433485 None:intergenic 30.0%
AACAATTTCGACATACATCA+GGG - chr7.3:5436067-5436086 None:intergenic 30.0%
AAGCTCTGTAAAAATCGATT+TGG + chr7.3:5435969-5435988 MS.gene072696:CDS 30.0%
AGTATTGTTAAGGATGTCAT+CGG + chr7.3:5434150-5434169 MS.gene072696:CDS 30.0%
ATTTATAAGTCAAACACACC+TGG - chr7.3:5433491-5433510 None:intergenic 30.0%
ATTTGACGATCTTTGAATAG+TGG - chr7.3:5435603-5435622 None:intergenic 30.0%
CAAGAACTATTAAGAAGACA+TGG - chr7.3:5435838-5435857 None:intergenic 30.0%
CATAGAAGATATGCTAGAAT+AGG - chr7.3:5436983-5437002 None:intergenic 30.0%
CTATTCTAGCATATCTTCTA+TGG + chr7.3:5436981-5437000 MS.gene072696:intron 30.0%
GAATTTACATCACTAACAAC+AGG - chr7.3:5433939-5433958 None:intergenic 30.0%
GACAATTGTTAATACACTTC+AGG + chr7.3:5436789-5436808 MS.gene072696:intron 30.0%
GGAGCGATATAAAAATATCA+AGG + chr7.3:5434352-5434371 MS.gene072696:intron 30.0%
GTATATTATGATCATCAGGA+AGG + chr7.3:5433710-5433729 MS.gene072696:CDS 30.0%
TACTGATGAGAAAAACAAAC+TGG + chr7.3:5435762-5435781 MS.gene072696:CDS 30.0%
TAGAAATGTTTGGGAGAAAT+AGG + chr7.3:5435002-5435021 MS.gene072696:CDS 30.0%
TATTAAATCATTTCAGCCAG+AGG + chr7.3:5436419-5436438 MS.gene072696:intron 30.0%
TCTTGTAAGGAAACAACAAA+AGG + chr7.3:5436569-5436588 MS.gene072696:CDS 30.0%
TGAAGGGAATAGAAATGTTT+GGG + chr7.3:5434993-5435012 MS.gene072696:CDS 30.0%
TGATGTATGTCGAAATTGTT+GGG + chr7.3:5436067-5436086 MS.gene072696:CDS 30.0%
TGTTCTCAATCAAAATATGC+AGG + chr7.3:5434331-5434350 MS.gene072696:intron 30.0%
TTGAAGGGAATAGAAATGTT+TGG + chr7.3:5434992-5435011 MS.gene072696:CDS 30.0%
! ACAATATGGTGGTGAAAAAA+AGG - chr7.3:5434529-5434548 None:intergenic 30.0%
! AGTTGAACGTAAATTTTCTC+AGG + chr7.3:5433784-5433803 MS.gene072696:CDS 30.0%
! ATAGAGAGTACAATTTGCTT+AGG - chr7.3:5436393-5436412 None:intergenic 30.0%
! ATTATTTTCTCTGGTAAAGG+GGG + chr7.3:5436137-5436156 MS.gene072696:intron 30.0%
! CAGTTATATTTTCTACCTTC+AGG + chr7.3:5435940-5435959 MS.gene072696:intron 30.0%
! CCGTATCATTCAAGTTAAAA+AGG - chr7.3:5436921-5436940 None:intergenic 30.0%
! CTTCTTCTTTTCCATTTAGA+TGG - chr7.3:5435739-5435758 None:intergenic 30.0%
! GTAGATTGTGTTTGTTAATG+GGG + chr7.3:5437304-5437323 MS.gene072696:intron 30.0%
! GTTGAACGTAAATTTTCTCA+GGG + chr7.3:5433785-5433804 MS.gene072696:CDS 30.0%
! TCTTGCTGTGAAAAATATTG+CGG + chr7.3:5435853-5435872 MS.gene072696:CDS 30.0%
! TTTTATGATGAAGACTTGCA+AGG + chr7.3:5435135-5435154 MS.gene072696:CDS 30.0%
!! AAACCCTCTCTATTATTTTG+TGG + chr7.3:5436186-5436205 MS.gene072696:intron 30.0%
!! AATTTAGTTTGAATCACCTC+TGG - chr7.3:5436438-5436457 None:intergenic 30.0%
!!! TTTGAATGGGTTATTTTGCT+AGG + chr7.3:5435627-5435646 MS.gene072696:intron 30.0%
AAGAAACATGGTTGCTTACT+GGG - chr7.3:5434655-5434674 None:intergenic 35.0%
AAGTACAAGGAAAACTCTTC+CGG - chr7.3:5436212-5436231 None:intergenic 35.0%
ATCTTTGATTGTCCTTTGCA+CGG + chr7.3:5434608-5434627 MS.gene072696:CDS 35.0%
CAACAATTTCGACATACATC+AGG - chr7.3:5436068-5436087 None:intergenic 35.0%
CATTACCTGAATTTCTGAAC+TGG - chr7.3:5434181-5434200 None:intergenic 35.0%
CTACATAAACTTCTGGATGA+TGG + chr7.3:5437422-5437441 MS.gene072696:CDS 35.0%
CTGATGTATGTCGAAATTGT+TGG + chr7.3:5436066-5436085 MS.gene072696:CDS 35.0%
GCATCAAAAGCTAATTGCTA+TGG + chr7.3:5437186-5437205 MS.gene072696:CDS 35.0%
TATACTCCTTGTGAATGTGA+GGG + chr7.3:5435793-5435812 MS.gene072696:CDS 35.0%
TATGTCGAAATTGTTGGGTT+AGG + chr7.3:5436072-5436091 MS.gene072696:CDS 35.0%
TCTGCAAAGTCATATGACTT+TGG + chr7.3:5435521-5435540 MS.gene072696:intron 35.0%
TGATGAACATGGTTTAACTG+AGG + chr7.3:5434119-5434138 MS.gene072696:CDS 35.0%
TGTATTAATTACGTACGAGC+AGG + chr7.3:5434286-5434305 MS.gene072696:intron 35.0%
TTGGGACTATAGAACTTACA+CGG - chr7.3:5433352-5433371 None:intergenic 35.0%
TTGTATGAGGGGCTTAAATT+TGG + chr7.3:5434838-5434857 MS.gene072696:CDS 35.0%
TTTGTCAATAGTTGTGGAGA+TGG + chr7.3:5436492-5436511 MS.gene072696:intron 35.0%
! AGCAGGCTAATTTTATGTCA+TGG + chr7.3:5434303-5434322 MS.gene072696:intron 35.0%
! AGGAGCTTTTCTTTGATTAC+GGG + chr7.3:5437372-5437391 MS.gene072696:CDS 35.0%
! CTCTACGATCTTCATCATTT+TGG - chr7.3:5434385-5434404 None:intergenic 35.0%
! CTTGCTGTGAAAAATATTGC+GGG + chr7.3:5435854-5435873 MS.gene072696:CDS 35.0%
! GAGGAGCTTTTCTTTGATTA+CGG + chr7.3:5437371-5437390 MS.gene072696:CDS 35.0%
! GATGATCCAACATTTTCTCA+AGG + chr7.3:5437458-5437477 MS.gene072696:CDS 35.0%
! GCTTTTCCTTGAGAAAATGT+TGG - chr7.3:5437467-5437486 None:intergenic 35.0%
!! AAAAACCTGTGAGAAGTATC+AGG + chr7.3:5433416-5433435 MS.gene072696:CDS 35.0%
!! CTCTGTAAAAATCGATTTGG+AGG + chr7.3:5435972-5435991 MS.gene072696:CDS 35.0%
!! GGAAGTGTTGAGTATTGTTA+AGG + chr7.3:5434140-5434159 MS.gene072696:CDS 35.0%
!! TCTTTCGGATTGGAAACTTT+TGG + chr7.3:5434955-5434974 MS.gene072696:CDS 35.0%
!!! GATTTTTTAGGAGAGTACAC+TGG + chr7.3:5436829-5436848 MS.gene072696:CDS 35.0%
!!! TTCTCACAGGTTTTTTGCTA+CGG - chr7.3:5433411-5433430 None:intergenic 35.0%
AAAGGAACACATTGAAGCTG+GGG + chr7.3:5437349-5437368 MS.gene072696:CDS 40.0%
ACCATGGCTACATAAACTTC+TGG + chr7.3:5437415-5437434 MS.gene072696:CDS 40.0%
AGAAGTTTATGTAGCCATGG+TGG - chr7.3:5437416-5437435 None:intergenic 40.0%
AGGACGGTATTTGATGAACA+TGG + chr7.3:5434108-5434127 MS.gene072696:intron 40.0%
AGGTACCAGTTCAGAAATTC+AGG + chr7.3:5434173-5434192 MS.gene072696:CDS 40.0%
AGTCTACTACTCTTTCGGAT+TGG + chr7.3:5434945-5434964 MS.gene072696:CDS 40.0%
AGTTCGAAAAGCAACCAGTT+TGG + chr7.3:5434741-5434760 MS.gene072696:intron 40.0%
AGTTGTGGAGATGGTAACTT+GGG + chr7.3:5436501-5436520 MS.gene072696:intron 40.0%
ATGGTTAGAGCTTAAGTGTG+AGG - chr7.3:5435050-5435069 None:intergenic 40.0%
ATTGTTAAGGATGTCATCGG+AGG + chr7.3:5434153-5434172 MS.gene072696:CDS 40.0%
CAAAGGAACACATTGAAGCT+GGG + chr7.3:5437348-5437367 MS.gene072696:CDS 40.0%
CACTTGTGTGACTCAATAGA+AGG + chr7.3:5434908-5434927 MS.gene072696:CDS 40.0%
CATATAGAAGCTGATAAGCG+TGG + chr7.3:5436865-5436884 MS.gene072696:CDS 40.0%
CGGCCACAAAATAATAGAGA+GGG - chr7.3:5436192-5436211 None:intergenic 40.0%
CTTGTGGACTTCCATCTAAA+TGG + chr7.3:5435725-5435744 MS.gene072696:CDS 40.0%
GAAGAAACATGGTTGCTTAC+TGG - chr7.3:5434656-5434675 None:intergenic 40.0%
GAGAGAGAAAGTCTCTTTGA+CGG - chr7.3:5435496-5435515 None:intergenic 40.0%
GTATACTCCTTGTGAATGTG+AGG + chr7.3:5435792-5435811 MS.gene072696:CDS 40.0%
TAGTTGTGGAGATGGTAACT+TGG + chr7.3:5436500-5436519 MS.gene072696:intron 40.0%
TCCAGAAGTTTATGTAGCCA+TGG - chr7.3:5437419-5437438 None:intergenic 40.0%
TGTATCCAAGACGTATATGG+AGG - chr7.3:5433463-5433482 None:intergenic 40.0%
TGTTGGATCATCATCTTCCT+TGG - chr7.3:5437450-5437469 None:intergenic 40.0%
TTAGTAAACTACTGGGGGAT+GGG + chr7.3:5435434-5435453 MS.gene072696:intron 40.0%
TTTAGTAAACTACTGGGGGA+TGG + chr7.3:5435433-5435452 MS.gene072696:intron 40.0%
TTTGTCAGATTCTTTGGGCA+AGG + chr7.3:5436667-5436686 MS.gene072696:intron 40.0%
! AGGGTGAAGACCGATTTATT+AGG + chr7.3:5433804-5433823 MS.gene072696:CDS 40.0%
! CAACCCGATCATCAAGTTTT+GGG + chr7.3:5433376-5433395 MS.gene072696:CDS 40.0%
! CTCTCCCAAAACTTGATGAT+CGG - chr7.3:5433383-5433402 None:intergenic 40.0%
! GTCTTGATGCTTTTCGCAAA+GGG + chr7.3:5437139-5437158 MS.gene072696:CDS 40.0%
! TCAACCCGATCATCAAGTTT+TGG + chr7.3:5433375-5433394 MS.gene072696:CDS 40.0%
! TCTCCCAAAACTTGATGATC+GGG - chr7.3:5433382-5433401 None:intergenic 40.0%
! TGATGTTCCATTTTCGTCCA+TGG - chr7.3:5435206-5435225 None:intergenic 40.0%
! TGTCTTGATGCTTTTCGCAA+AGG + chr7.3:5437138-5437157 MS.gene072696:CDS 40.0%
! TTTTTACTGTCGTCGTTGCA+TGG + chr7.3:5434472-5434491 MS.gene072696:CDS 40.0%
!! CCTCTCTATTATTTTGTGGC+CGG + chr7.3:5436190-5436209 MS.gene072696:intron 40.0%
!! TGATGATCGGGTTGATGATT+GGG - chr7.3:5433370-5433389 None:intergenic 40.0%
!! TTGATGATCGGGTTGATGAT+TGG - chr7.3:5433371-5433390 None:intergenic 40.0%
!! TTTTGAGAACAACCGTGCAA+AGG - chr7.3:5434623-5434642 None:intergenic 40.0%
AAGGTCTGATGTTGCTGGAT+GGG + chr7.3:5436686-5436705 MS.gene072696:CDS 45.0%
AATAGAAGGACAAGCTGAGG+AGG + chr7.3:5434922-5434941 MS.gene072696:CDS 45.0%
ACATGGACATTGCTTTCCAC+AGG - chr7.3:5435821-5435840 None:intergenic 45.0%
ACGAAAATAGTCGACCACCA+TGG + chr7.3:5437399-5437418 MS.gene072696:CDS 45.0%
AGAGAAAGTCTCTTTGACGG+TGG - chr7.3:5435493-5435512 None:intergenic 45.0%
AGGACAATGAGATGACATCG+AGG + chr7.3:5435647-5435666 MS.gene072696:intron 45.0%
AGGTAACAGTCATCACCACA+TGG - chr7.3:5434791-5434810 None:intergenic 45.0%
ATGAGATGACATCGAGGTCA+AGG + chr7.3:5435653-5435672 MS.gene072696:CDS 45.0%
CATGGATCCATGGACGAAAA+TGG + chr7.3:5435196-5435215 MS.gene072696:CDS 45.0%
CCGGCCACAAAATAATAGAG+AGG - chr7.3:5436193-5436212 None:intergenic 45.0%
CGTCTTGGATACATTTAGCC+AGG + chr7.3:5433470-5433489 MS.gene072696:CDS 45.0%
CTCAATAGAAGGACAAGCTG+AGG + chr7.3:5434919-5434938 MS.gene072696:CDS 45.0%
GCAAAGGAACACATTGAAGC+TGG + chr7.3:5437347-5437366 MS.gene072696:CDS 45.0%
GGACTATAGAACTTACACGG+TGG - chr7.3:5433349-5433368 None:intergenic 45.0%
GGAGGAGTCTACTACTCTTT+CGG + chr7.3:5434940-5434959 MS.gene072696:CDS 45.0%
GGTTACCTCCATATACGTCT+TGG + chr7.3:5433455-5433474 MS.gene072696:CDS 45.0%
TCATCACCACATGGTTCTCT+GGG - chr7.3:5434782-5434801 None:intergenic 45.0%
TCTCTCGAAGCTGCAAAACA+TGG - chr7.3:5436038-5436057 None:intergenic 45.0%
TGAAGAGTCAAACGAGCACA+AGG + chr7.3:5433760-5433779 MS.gene072696:CDS 45.0%
TGGATGGGGAGCTTTCTTAA+AGG + chr7.3:5436701-5436720 MS.gene072696:CDS 45.0%
TTTGACGGTGGTTTGAGGAT+GGG - chr7.3:5435481-5435500 None:intergenic 45.0%
! ACTTCTGGATGATGGTTCCA+AGG + chr7.3:5437430-5437449 MS.gene072696:CDS 45.0%
! TTTTCGTCCATGGATCCATG+TGG - chr7.3:5435196-5435215 None:intergenic 45.0%
!! ACAGAGCTTTGAACACCTGA+AGG - chr7.3:5435958-5435977 None:intergenic 45.0%
!!! CGATCATCAAGTTTTGGGAG+AGG + chr7.3:5433381-5433400 MS.gene072696:CDS 45.0%
AAACTACTGGGGGATGGGAT+GGG + chr7.3:5435439-5435458 MS.gene072696:intron 50.0%
AGAAACAGTGCTCTCGCTGA+AGG + chr7.3:5437489-5437508 MS.gene072696:CDS 50.0%
AGGTCTGATGTTGCTGGATG+GGG + chr7.3:5436687-5436706 MS.gene072696:CDS 50.0%
CAAGGTCTGATGTTGCTGGA+TGG + chr7.3:5436685-5436704 MS.gene072696:CDS 50.0%
CCAGTTTGGCAAGAACCTGA+AGG + chr7.3:5434755-5434774 MS.gene072696:CDS 50.0%
CTTTGACGGTGGTTTGAGGA+TGG - chr7.3:5435482-5435501 None:intergenic 50.0%
GCTGAAGAGTCAATGCCACA+TGG + chr7.3:5435178-5435197 MS.gene072696:CDS 50.0%
GGAGGTAACCTGTTGATGCT+TGG - chr7.3:5433445-5433464 None:intergenic 50.0%
GGCATCCTGATACTTCTCAC+AGG - chr7.3:5433424-5433443 None:intergenic 50.0%
GTCAATGCCACATGGATCCA+TGG + chr7.3:5435186-5435205 MS.gene072696:CDS 50.0%
GTCATCACCACATGGTTCTC+TGG - chr7.3:5434783-5434802 None:intergenic 50.0%
GTCTCTTTGACGGTGGTTTG+AGG - chr7.3:5435486-5435505 None:intergenic 50.0%
TAAACTACTGGGGGATGGGA+TGG + chr7.3:5435438-5435457 MS.gene072696:intron 50.0%
TCAGGATGCCAAGCATCAAC+AGG + chr7.3:5433434-5433453 MS.gene072696:CDS 50.0%
TTGACGGTGGTTTGAGGATG+GGG - chr7.3:5435480-5435499 None:intergenic 50.0%
TTGAGGATGGGGATCTTACG+TGG - chr7.3:5435469-5435488 None:intergenic 50.0%
! CCTTCAGGTTCTTGCCAAAC+TGG - chr7.3:5434758-5434777 None:intergenic 50.0%
!! TCAGCGAGAGCACTGTTTCT+TGG - chr7.3:5437489-5437508 None:intergenic 50.0%
AACTACTGGGGGATGGGATG+GGG + chr7.3:5435440-5435459 MS.gene072696:intron 55.0%
AGAGTCGTCTCATCGTGGAG+AGG + chr7.3:5436524-5436543 MS.gene072696:CDS 55.0%
CAGGCTCCCTCACATTCACA+AGG - chr7.3:5435802-5435821 None:intergenic 55.0%
GAAGGTCCCAGAGAACCATG+TGG + chr7.3:5434773-5434792 MS.gene072696:CDS 55.0%
GGAACACATTGAAGCTGGGG+AGG + chr7.3:5437352-5437371 MS.gene072696:CDS 55.0%
TGGGCAAGGTCTGATGTTGC+TGG + chr7.3:5436681-5436700 MS.gene072696:CDS 55.0%
TGTGAATGTGAGGGAGCCTG+TGG + chr7.3:5435802-5435821 MS.gene072696:CDS 55.0%
TTGGGAGAGTCGTCTCATCG+TGG + chr7.3:5436519-5436538 MS.gene072696:CDS 55.0%
!! CATGGTTCTCTGGGACCTTC+AGG - chr7.3:5434773-5434792 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 5433337 5437508 5433337 ID=MS.gene072696
chr7.3 mRNA 5433337 5437508 5433337 ID=MS.gene072696.t1;Parent=MS.gene072696
chr7.3 exon 5433337 5433491 5433337 ID=MS.gene072696.t1.exon1;Parent=MS.gene072696.t1
chr7.3 CDS 5433337 5433491 5433337 ID=cds.MS.gene072696.t1;Parent=MS.gene072696.t1
chr7.3 exon 5433664 5433825 5433664 ID=MS.gene072696.t1.exon2;Parent=MS.gene072696.t1
chr7.3 CDS 5433664 5433825 5433664 ID=cds.MS.gene072696.t1;Parent=MS.gene072696.t1
chr7.3 exon 5434110 5434194 5434110 ID=MS.gene072696.t1.exon3;Parent=MS.gene072696.t1
chr7.3 CDS 5434110 5434194 5434110 ID=cds.MS.gene072696.t1;Parent=MS.gene072696.t1
chr7.3 exon 5434353 5434493 5434353 ID=MS.gene072696.t1.exon4;Parent=MS.gene072696.t1
chr7.3 CDS 5434353 5434493 5434353 ID=cds.MS.gene072696.t1;Parent=MS.gene072696.t1
chr7.3 exon 5434608 5434655 5434608 ID=MS.gene072696.t1.exon5;Parent=MS.gene072696.t1
chr7.3 CDS 5434608 5434655 5434608 ID=cds.MS.gene072696.t1;Parent=MS.gene072696.t1
chr7.3 exon 5434743 5435023 5434743 ID=MS.gene072696.t1.exon6;Parent=MS.gene072696.t1
chr7.3 CDS 5434743 5435023 5434743 ID=cds.MS.gene072696.t1;Parent=MS.gene072696.t1
chr7.3 exon 5435111 5435240 5435111 ID=MS.gene072696.t1.exon7;Parent=MS.gene072696.t1
chr7.3 CDS 5435111 5435240 5435111 ID=cds.MS.gene072696.t1;Parent=MS.gene072696.t1
chr7.3 exon 5435649 5435875 5435649 ID=MS.gene072696.t1.exon8;Parent=MS.gene072696.t1
chr7.3 CDS 5435649 5435875 5435649 ID=cds.MS.gene072696.t1;Parent=MS.gene072696.t1
chr7.3 exon 5435962 5436093 5435962 ID=MS.gene072696.t1.exon9;Parent=MS.gene072696.t1
chr7.3 CDS 5435962 5436093 5435962 ID=cds.MS.gene072696.t1;Parent=MS.gene072696.t1
chr7.3 exon 5436503 5436590 5436503 ID=MS.gene072696.t1.exon10;Parent=MS.gene072696.t1
chr7.3 CDS 5436503 5436590 5436503 ID=cds.MS.gene072696.t1;Parent=MS.gene072696.t1
chr7.3 exon 5436675 5436722 5436675 ID=MS.gene072696.t1.exon11;Parent=MS.gene072696.t1
chr7.3 CDS 5436675 5436722 5436675 ID=cds.MS.gene072696.t1;Parent=MS.gene072696.t1
chr7.3 exon 5436811 5436939 5436811 ID=MS.gene072696.t1.exon12;Parent=MS.gene072696.t1
chr7.3 CDS 5436811 5436939 5436811 ID=cds.MS.gene072696.t1;Parent=MS.gene072696.t1
chr7.3 exon 5437135 5437212 5437135 ID=MS.gene072696.t1.exon13;Parent=MS.gene072696.t1
chr7.3 CDS 5437135 5437212 5437135 ID=cds.MS.gene072696.t1;Parent=MS.gene072696.t1
chr7.3 exon 5437308 5437508 5437308 ID=MS.gene072696.t1.exon14;Parent=MS.gene072696.t1
chr7.3 CDS 5437308 5437508 5437308 ID=cds.MS.gene072696.t1;Parent=MS.gene072696.t1
Gene Sequence

>MS.gene072696

ATGAATCGTCCACCGTGTAAGTTCTATAGTCCCAATCATCAACCCGATCATCAAGTTTTGGGAGAGGAAGACCGTAGCAAAAAACCTGTGAGAAGTATCAGGATGCCAAGCATCAACAGGTTACCTCCATATACGTCTTGGATACATTTAGCCAGGTGTGTTTGACTTATAAATTTCAATGATATGTTGTGAATCCTCTTACATGAAATTTTTTAGGAAGTGAAAGTGTATGTTTAATATGCATTTGATGTCAAATGTTATTGATCAACCTATGTTAAATTTGTGTCATCTATTTACTACTTCTTGAAAACATTTCTTGCAAAACAGAAATGAAAAAATGACTGCAGATCAGTCAGTTTCTAGAAAAAGAAATGTATATTATGATCATCAGGAAGGTGAAACATTAGTATGCAGTGATAGTGATGAAGAGTCAAACGAGCACAAGGAAGTTGAACGTAAATTTTCTCAGGGTGAAGACCGATTTATTAGGTAAATCAAAATGTACATGTTGTTATATTTACATTTAGAAGTTCTATTTAATTTATCAGTAGAATTAGAGATACAATGACAATAAATAATTAGAGATATTGACTGCAATACCTGTTGTTAGTGATGTAAATTCTTAAATTTCAAATTTAATTGATATGTAATACATATTTTGCTGGACCTCCGAAAAGTTTATACTTATTGTGCATCATTTTTTCTACTTCATTAAAATAATTTAAGTTTCTCCTTCACTAAACATATTATCTTGTGACTATTTAATATATTAGGACGGTATTTGATGAACATGGTTTAACTGAGGAAGTGTTGAGTATTGTTAAGGATGTCATCGGAGGTACCAGTTCAGAAATTCAGGTAATGTAGAGTAATTTACAAGATTAATATAGCTTTGATGATTGTTAATTCTGATATGTATTACAAAAATAAGTTTCTTTGTGATATTTGTTGTATTAATTACGTACGAGCAGGCTAATTTTATGTCATGGACAAATGTTCTCAATCAAAATATGCAGGAGCGATATAAAAATATCAAGGAAAAGGACCAAAATGATGAAGATCGTAGAGAAAGTGAATCTCAGACTGATATAAGCTTGAACAAAAGCTTGAGTGCCTCTTTAGATACTTTTGATCATTTTTACTGTCGTCGTTGCATGGTAAATACAAGAAAAATAATATCAATATTTTGCCTTTTTTTCACCACCATATTGTTGTCTATAATATGATAATGATTATATTGTGTGTCTTTATTTTTGTAATTTTTTTTGTAGATCTTTGATTGTCCTTTGCACGGTTGTTCTCAAAAGATAATATACCCAGTAAGCAACCATGTTTCTTCATTCATTTCTTAACATGTGCATGCTTCCAGTATCAATGAATAATTAATTTGATGGTTTACTTCTCAGTTCGAAAAGCAACCAGTTTGGCAAGAACCTGAAGGTCCCAGAGAACCATGTGGTGATGACTGTTACCTTCATAATAAAGATGTCACAATTAGTAATTGTATGAGGGGCTTAAATTTGGATGCTAACAATGAAGAAAAAAATGATATGGAGGAAACAAAATCGAAACACTTGTGTGACTCAATAGAAGGACAAGCTGAGGAGGAGTCTACTACTCTTTCGGATTGGAAACTTTTGGAAAAAGAATTATACTTGAAGGGAATAGAAATGTTTGGGAGAAATAGGTATAAATCTTTCTCATTTTTCACCTCACACTTAAGCTCTAACCATTTTTCTAATATTTTGGCTTATACGCAATTTATGTTTTGCAGTTGTCTTATAGCTAAGAACTTACTTTTTATGATGAAGACTTGCAAGGAAGTTGCTAGATACATGTATGCTGAAGAGTCAATGCCACATGGATCCATGGACGAAAATGGAACATCAGATGCAATGCGCATTGTGAGCATTACAATCATTCATTTCATATACTCATCTCTTGTTGTTTTTTGTAGTCTACGTCTAAGATATTATTATGAGTCTTGTAGCATTAGTAAACTTAACGTAAAATAAATTTATTTGCATGTTATGTGAATAGATAAACAAATATAAAATGTAAAATATTTGAATATATCTATACAATTTTAATGTTATTTTAGTAAACTACTGGGGGATGGGATGGGGTCTCCACGTAAGATCCCCATCCTCAAACCACCGTCAAAGAGACTTTCTCTCTCTCTCGTCTGCAAAGTCATATGACTTTGGCACTTGAATATAATTTTTCAATTTTTTTTTTCAAACAAGAACATTTATGCAGTAGTCCACTATTCAAAGATCGTCAAATTGTTTTTGAATGGGTTATTTTGCTAGGACAATGAGATGACATCGAGGTCAAGGTCGTTGCAAAGAAAGAGCAAATCTAAGAAGTTCAAATATTCTTCAAAATCTTGTGGACTTCCATCTAAATGGAAAAGAAGAAGAAATACTGATGAGAAAAACAAACTGGAGAAGCAGTATACTCCTTGTGAATGTGAGGGAGCCTGTGGAAAGCAATGTCCATGTCTTCTTAATAGTTCTTGCTGTGAAAAATATTGCGGGTATGTCAATTTTCATTTAATTATGTTCCTTTTCGATGGAAAACAATTATGTTTTCAATGTGATCAGTTATATTTTCTACCTTCAGGTGTTCAAAGCTCTGTAAAAATCGATTTGGAGGATGTCAGTGTACTAAGAGTCAGTGTAGAAGTCGACACTGTCCATGTTTTGCAGCTTCGAGAGATTGTGACCCTGATGTATGTCGAAATTGTTGGGTTAGGTAATGTCTTTAATGTTAAATTTATTTCATTTTTCCTATATGTATTATTTTCTCTGGTAAAGGGGGCTTTGTTTGTGTTATGAGTGATTTACAAACCCTCTCTATTATTTTGTGGCCGGAAGAGTTTTCCTTGTACTTGAATTAAGTACTATTTGTACTTCTCTCATTCTACTTAACAAAATAAACACTGCATGTGATTGAATAAGTCATAAGTAATGTTTTTGGTCATAAGTAATGTTTTCCTTGTAGAATTGAATTAATTATGTCATGTATCTTTTGCTACGATAGTTGATGTACCTAAGCAAATTGTACTCTCTATATTTTCTATTAAATCATTTCAGCCAGAGGTGATTCAAACTAAATTGTAACTAATATAATGCTTTTAACTATGGCATTTTTTTGTCAATAGTTGTGGAGATGGTAACTTGGGAGAGTCGTCTCATCGTGGAGAGGATCAATGTGAAAACATGATGCTTCTTGTAAGGAAACAACAAAAGGTATTTTTATTTTTTTGCTCTTTACATTATCTATATTAAATTCATGAAATATCAGTTTCCTTAATTGATTTGTATATTTGTCAGATTCTTTGGGCAAGGTCTGATGTTGCTGGATGGGGAGCTTTCTTAAAGGTTAGAGATGTTTGCACTTGATTTATTTTATAAGAAAAAATTGTGAGTGTATTGTTATCACTGATTGACAATTGTTAATACACTTCAGGCCCCAGCAAACAAAAATGATTTTTTAGGAGAGTACACTGGTGAAGTAATCTCTCATATAGAAGCTGATAAGCGTGGAAAATTTTATGATCGTGTAGACTTTTCGTACCTTTTTAACTTGAATGATACGGTAAGTGTCTCGTATCAATTATAATTTCTCTTAAATTGAGCCTATTCTAGCATATCTTCTATGGACAAGCTTTCTCAATTAGTTTTTTTTTTTATTTTTTATCAAGAGCTTTCTTAATTACAAAGATAAATCTAATTACTATACAAAATGACTGCAAAATGACTCCATATTAACCTATACTATGAATTTTTTCAGTACTGTCTTGATGCTTTTCGCAAAGGGAACAAGTTGAAGTTTGCAAATCACGCATCAAAAGCTAATTGCTATGGAAAGGTGAGTCAAGCAACTCATTTTTATGAAACTTATCTTTTGATCTCTACACTGTGTACTTCATTATTGAATTGCAAATAATGTGTGGTCTATTGTAGATTGTGTTTGTTAATGGGGATCATCGAGTAGGAATATTTGCAAAGGAACACATTGAAGCTGGGGAGGAGCTTTTCTTTGATTACGGGTATGACGAAAATAGTCGACCACCATGGCTACATAAACTTCTGGATGATGGTTCCAAGGAAGATGATGATCCAACATTTTCTCAAGGAAAAGCCAAGAAACAGTGCTCTCGCTGA
Protein sequence

>MS.gene072696.t1

MNRPPCKFYSPNHQPDHQVLGEEDRSKKPVRSIRMPSINRLPPYTSWIHLARNEKMTADQSVSRKRNVYYDHQEGETLVCSDSDEESNEHKEVERKFSQGEDRFIRTVFDEHGLTEEVLSIVKDVIGGTSSEIQERYKNIKEKDQNDEDRRESESQTDISLNKSLSASLDTFDHFYCRRCMIFDCPLHGCSQKIIYPFEKQPVWQEPEGPREPCGDDCYLHNKDVTISNCMRGLNLDANNEEKNDMEETKSKHLCDSIEGQAEEESTTLSDWKLLEKELYLKGIEMFGRNSCLIAKNLLFMMKTCKEVARYMYAEESMPHGSMDENGTSDAMRIDNEMTSRSRSLQRKSKSKKFKYSSKSCGLPSKWKRRRNTDEKNKLEKQYTPCECEGACGKQCPCLLNSSCCEKYCGCSKLCKNRFGGCQCTKSQCRSRHCPCFAASRDCDPDVCRNCWVSCGDGNLGESSHRGEDQCENMMLLVRKQQKILWARSDVAGWGAFLKAPANKNDFLGEYTGEVISHIEADKRGKFYDRVDFSYLFNLNDTYCLDAFRKGNKLKFANHASKANCYGKIVFVNGDHRVGIFAKEHIEAGEELFFDYGYDENSRPPWLHKLLDDGSKEDDDPTFSQGKAKKQCSR