Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072713.t1 | KAE8686544.1 | 90.5 | 63 | 6 | 0 | 1 | 63 | 414 | 476 | 2.60E-18 | 100.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072713.t1 | Q04088 | 74.6 | 63 | 16 | 0 | 1 | 63 | 189 | 251 | 2.3e-15 | 82.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072713.t1 | A0A072UX84 | 88.9 | 63 | 7 | 0 | 1 | 63 | 348 | 410 | 5.5e-18 | 99.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene072713.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072713.t1 | MTR_4g072090 | 88.889 | 63 | 7 | 0 | 1 | 63 | 348 | 410 | 1.32e-30 | 111 |
| MS.gene072713.t1 | MTR_4g072090 | 88.889 | 63 | 7 | 0 | 1 | 63 | 348 | 410 | 2.29e-30 | 111 |
| MS.gene072713.t1 | MTR_2g099050 | 74.603 | 63 | 16 | 0 | 1 | 63 | 209 | 271 | 5.29e-24 | 93.2 |
| MS.gene072713.t1 | MTR_6g034945 | 74.603 | 63 | 16 | 0 | 1 | 63 | 139 | 201 | 9.70e-24 | 91.3 |
| MS.gene072713.t1 | MTR_5g075390 | 74.603 | 63 | 16 | 0 | 1 | 63 | 147 | 209 | 3.32e-23 | 90.1 |
| MS.gene072713.t1 | MTR_3g467120 | 74.603 | 63 | 16 | 0 | 1 | 63 | 165 | 227 | 7.94e-23 | 89.4 |
| MS.gene072713.t1 | MTR_3g094020 | 66.667 | 63 | 21 | 0 | 1 | 63 | 96 | 158 | 5.80e-21 | 83.6 |
| MS.gene072713.t1 | MTR_0405s0060 | 81.818 | 44 | 8 | 0 | 1 | 44 | 112 | 155 | 1.48e-17 | 73.6 |
| MS.gene072713.t1 | MTR_1g023690 | 77.273 | 66 | 15 | 0 | 1 | 66 | 375 | 440 | 7.72e-16 | 70.5 |
| MS.gene072713.t1 | MTR_2g090900 | 59.615 | 52 | 21 | 0 | 11 | 62 | 189 | 240 | 5.52e-13 | 62.0 |
| MS.gene072713.t1 | MTR_2g090900 | 58.491 | 53 | 22 | 0 | 11 | 63 | 189 | 241 | 5.84e-13 | 62.0 |
| MS.gene072713.t1 | MTR_4g079500 | 56.604 | 53 | 23 | 0 | 11 | 63 | 192 | 244 | 3.93e-12 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072713.t1 | AT2G21230 | 79.032 | 62 | 13 | 0 | 2 | 63 | 359 | 420 | 1.04e-24 | 95.5 |
| MS.gene072713.t1 | AT4G38900 | 80.952 | 63 | 12 | 0 | 1 | 63 | 382 | 444 | 1.07e-24 | 95.5 |
| MS.gene072713.t1 | AT4G38900 | 80.952 | 63 | 12 | 0 | 1 | 63 | 382 | 444 | 1.07e-24 | 95.5 |
| MS.gene072713.t1 | AT2G21230 | 79.032 | 62 | 13 | 0 | 2 | 63 | 359 | 420 | 1.10e-24 | 95.5 |
| MS.gene072713.t1 | AT2G21230 | 79.032 | 62 | 13 | 0 | 2 | 63 | 359 | 420 | 1.10e-24 | 95.5 |
| MS.gene072713.t1 | AT1G43700 | 68.254 | 63 | 20 | 0 | 1 | 63 | 182 | 244 | 2.22e-23 | 90.5 |
| MS.gene072713.t1 | AT1G06070 | 76.271 | 59 | 14 | 0 | 5 | 63 | 202 | 260 | 3.78e-23 | 90.9 |
| MS.gene072713.t1 | AT2G40620 | 73.016 | 63 | 17 | 0 | 1 | 63 | 136 | 198 | 5.81e-23 | 89.7 |
| MS.gene072713.t1 | AT2G31370 | 74.603 | 63 | 16 | 0 | 1 | 63 | 189 | 251 | 6.65e-23 | 89.7 |
| MS.gene072713.t1 | AT2G21230 | 79.032 | 62 | 13 | 0 | 2 | 63 | 359 | 420 | 7.33e-23 | 90.1 |
| MS.gene072713.t1 | AT2G31370 | 74.603 | 63 | 16 | 0 | 1 | 63 | 189 | 251 | 8.49e-23 | 89.7 |
| MS.gene072713.t1 | AT2G31370 | 74.603 | 63 | 16 | 0 | 1 | 63 | 189 | 251 | 8.49e-23 | 89.7 |
| MS.gene072713.t1 | AT2G31370 | 74.603 | 63 | 16 | 0 | 1 | 63 | 189 | 251 | 8.49e-23 | 89.7 |
| MS.gene072713.t1 | AT2G31370 | 74.603 | 63 | 16 | 0 | 1 | 63 | 189 | 251 | 8.49e-23 | 89.7 |
| MS.gene072713.t1 | AT2G31370 | 74.603 | 63 | 16 | 0 | 1 | 63 | 189 | 251 | 8.49e-23 | 89.7 |
| MS.gene072713.t1 | AT2G31370 | 74.603 | 63 | 16 | 0 | 1 | 63 | 189 | 251 | 8.49e-23 | 89.7 |
| MS.gene072713.t1 | AT1G06850 | 73.016 | 63 | 17 | 0 | 1 | 63 | 136 | 198 | 9.25e-23 | 87.0 |
| MS.gene072713.t1 | AT4G38900 | 73.913 | 69 | 12 | 1 | 1 | 63 | 382 | 450 | 2.04e-22 | 89.0 |
| MS.gene072713.t1 | AT1G06850 | 73.016 | 63 | 17 | 0 | 1 | 63 | 136 | 198 | 3.75e-22 | 87.4 |
| MS.gene072713.t1 | AT3G58120 | 60.784 | 51 | 20 | 0 | 13 | 63 | 202 | 252 | 5.77e-13 | 62.0 |
| MS.gene072713.t1 | AT3G58120 | 62.000 | 50 | 19 | 0 | 13 | 62 | 202 | 251 | 2.22e-12 | 60.5 |
| MS.gene072713.t1 | AT2G42380 | 58.824 | 51 | 21 | 0 | 13 | 63 | 186 | 236 | 2.36e-12 | 60.1 |
| MS.gene072713.t1 | AT2G42380 | 58.824 | 51 | 21 | 0 | 13 | 63 | 186 | 236 | 3.66e-12 | 59.7 |
Find 11 sgRNAs with CRISPR-Local
Find 118 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCACAACTTACTTTGTTGC+AGG | 0.290633 | 7.3:-5605170 | MS.gene072713:intron |
| GCGCAAGATGCAATACATTT+CGG | 0.446357 | 7.3:-5605242 | MS.gene072713:CDS |
| TAGCACCTCTTAGCCCGCTT+CGG | 0.466315 | 7.3:+5605388 | None:intergenic |
| CATTTCGGAGCTAGAACAAA+AGG | 0.466921 | 7.3:-5605227 | MS.gene072713:CDS |
| GAAAGTTGCTGAGATTGTTA+TGG | 0.484882 | 7.3:-5605416 | MS.gene072713:CDS |
| CATCTTTGAAGCTGCATGAA+GGG | 0.494452 | 7.3:+5603322 | None:intergenic |
| TCATCTTTGAAGCTGCATGA+AGG | 0.520555 | 7.3:+5603321 | None:intergenic |
| CTGATCCGAAGCGGGCTAAG+AGG | 0.529672 | 7.3:-5605393 | MS.gene072713:intron |
| TGTTATGGCTGATCCGAAGC+GGG | 0.561676 | 7.3:-5605401 | MS.gene072713:CDS |
| TTGTTATGGCTGATCCGAAG+CGG | 0.656660 | 7.3:-5605402 | MS.gene072713:CDS |
| AAGTTGTGCAGAAAGTGTAG+TGG | 0.665732 | 7.3:+5605183 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAGTATATTTTTTCATT+TGG | - | chr7.3:5604227-5604246 | MS.gene072713:intron | 10.0% |
| !!! | TTTTTATTTCATAAAAAGAA+TGG | - | chr7.3:5604390-5604409 | MS.gene072713:intron | 10.0% |
| !! | AAAATAAATAAGCAATATGA+AGG | + | chr7.3:5604554-5604573 | None:intergenic | 15.0% |
| !! | AAATAAATAAGCAATATGAA+GGG | + | chr7.3:5604553-5604572 | None:intergenic | 15.0% |
| !! | ATTATTAAAGAAGGATAAAA+TGG | + | chr7.3:5605029-5605048 | None:intergenic | 15.0% |
| !!! | AAGTTTTGGATTTATTTTTT+TGG | - | chr7.3:5604096-5604115 | MS.gene072713:intron | 15.0% |
| !!! | AGATATTTGTTAATAGAAAT+GGG | + | chr7.3:5603761-5603780 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTTTGGTTATTTC+AGG | - | chr7.3:5603445-5603464 | MS.gene072713:intron | 15.0% |
| !!! | TAATCAACTTAAGTTTTTTT+AGG | - | chr7.3:5605353-5605372 | MS.gene072713:intron | 15.0% |
| !!! | TAGATATTTGTTAATAGAAA+TGG | + | chr7.3:5603762-5603781 | None:intergenic | 15.0% |
| !!! | TTTGATTTTTATGATTTGTT+TGG | - | chr7.3:5605222-5605241 | MS.gene072713:CDS | 15.0% |
| !!! | TTTTTTTAGGTTTCTAATTA+GGG | - | chr7.3:5605366-5605385 | MS.gene072713:intron | 15.0% |
| !! | AAAATTAAGCTAAAATGAGA+AGG | - | chr7.3:5603998-5604017 | MS.gene072713:intron | 20.0% |
| !! | AAATTAAGCTAAAATGAGAA+GGG | - | chr7.3:5603999-5604018 | MS.gene072713:intron | 20.0% |
| !! | ATACTAATATACAAAGATGA+AGG | + | chr7.3:5604969-5604988 | None:intergenic | 20.0% |
| !! | ATAGACATCTATACTATTAT+TGG | - | chr7.3:5603944-5603963 | MS.gene072713:intron | 20.0% |
| !! | TAGACATCTATACTATTATT+GGG | - | chr7.3:5603945-5603964 | MS.gene072713:intron | 20.0% |
| !! | TTTAGTTAGTAATGTCAATA+TGG | - | chr7.3:5603402-5603421 | MS.gene072713:intron | 20.0% |
| !!! | AGTTTAGTTTTTAACACAAA+AGG | - | chr7.3:5603864-5603883 | MS.gene072713:intron | 20.0% |
| !!! | ATATTTTTTCATTTGGAGTT+TGG | - | chr7.3:5604234-5604253 | MS.gene072713:intron | 20.0% |
| !!! | ATTGTTTCTTATATCTGAAA+TGG | - | chr7.3:5603823-5603842 | MS.gene072713:intron | 20.0% |
| !!! | GTTTTTTTAGGTTTCTAATT+AGG | - | chr7.3:5605365-5605384 | MS.gene072713:intron | 20.0% |
| !!! | TGACTTGGATATTTTTTTTT+TGG | - | chr7.3:5603435-5603454 | MS.gene072713:intron | 20.0% |
| ! | AAGTTTAATGTTCAACTTGA+TGG | + | chr7.3:5605125-5605144 | None:intergenic | 25.0% |
| ! | AATAGTATAGATGTCTATCA+AGG | + | chr7.3:5603942-5603961 | None:intergenic | 25.0% |
| ! | AATTAAGCTAAAATGAGAAG+GGG | - | chr7.3:5604000-5604019 | MS.gene072713:intron | 25.0% |
| ! | ACAATGTCAAATTGATGTAT+AGG | + | chr7.3:5603976-5603995 | None:intergenic | 25.0% |
| ! | ATCTCATGTTAAGAACTAAA+CGG | + | chr7.3:5603899-5603918 | None:intergenic | 25.0% |
| ! | GAGATAAATTACATAGACAA+TGG | + | chr7.3:5604036-5604055 | None:intergenic | 25.0% |
| ! | TAAACCATCAACAATATGAA+GGG | + | chr7.3:5604593-5604612 | None:intergenic | 25.0% |
| ! | TGTAAAACTACTCAAATCAT+AGG | + | chr7.3:5603699-5603718 | None:intergenic | 25.0% |
| ! | TTCATTGAACATTGCAAATT+TGG | + | chr7.3:5603672-5603691 | None:intergenic | 25.0% |
| !! | TACAAATGAATCAGATTTTG+AGG | - | chr7.3:5604421-5604440 | MS.gene072713:intron | 25.0% |
| !! | TCTTTTTGAACATTTAGTGA+AGG | - | chr7.3:5603726-5603745 | MS.gene072713:intron | 25.0% |
| !! | TTATATCTGAAATGGACAAA+AGG | - | chr7.3:5603831-5603850 | MS.gene072713:intron | 25.0% |
| !!! | AAATATGCTAAAAGCATTCA+TGG | + | chr7.3:5603789-5603808 | None:intergenic | 25.0% |
| !!! | ATCAAGTTGAACATTAAACT+TGG | - | chr7.3:5605124-5605143 | MS.gene072713:intron | 25.0% |
| !!! | CAATTTGATTTGGATTTTAG+AGG | + | chr7.3:5605081-5605100 | None:intergenic | 25.0% |
| !!! | TGGATTTATTTTTTTGGTGA+AGG | - | chr7.3:5604102-5604121 | MS.gene072713:intron | 25.0% |
| !!! | TTTTTTCCCAAGTTTTGTTT+CGG | - | chr7.3:5604788-5604807 | MS.gene072713:intron | 25.0% |
| AAAGACACTACTTGTGAAAA+TGG | + | chr7.3:5604337-5604356 | None:intergenic | 30.0% | |
| ATACAAAGATGAAGGAATGA+AGG | + | chr7.3:5604961-5604980 | None:intergenic | 30.0% | |
| ATATGAAGGGAAAAATCCAA+TGG | + | chr7.3:5604540-5604559 | None:intergenic | 30.0% | |
| ATTATTGTCATTGCAAAGTG+AGG | + | chr7.3:5604134-5604153 | None:intergenic | 30.0% | |
| CTAAACCATCAACAATATGA+AGG | + | chr7.3:5604594-5604613 | None:intergenic | 30.0% | |
| CTTCATTATCTCCATATCAA+AGG | + | chr7.3:5604474-5604493 | None:intergenic | 30.0% | |
| GATTTCTTTCTCATATTGCT+TGG | - | chr7.3:5605146-5605165 | MS.gene072713:intron | 30.0% | |
| GTAGCTGTCATTATTAAAGA+AGG | + | chr7.3:5605038-5605057 | None:intergenic | 30.0% | |
| GTTAGTAATGTCAATATGGA+TGG | - | chr7.3:5603406-5603425 | MS.gene072713:intron | 30.0% | |
| TAGGTAGTGTCAATTTGATT+TGG | + | chr7.3:5605091-5605110 | None:intergenic | 30.0% | |
| ! | AAGAAGTGCAAAAAACGAAA+TGG | + | chr7.3:5604926-5604945 | None:intergenic | 30.0% |
| ! | AGAAGGAATTCTCTATTTCT+AGG | + | chr7.3:5605269-5605288 | None:intergenic | 30.0% |
| ! | GTTTGTGAAACAATGTTTTG+AGG | - | chr7.3:5603618-5603637 | MS.gene072713:intron | 30.0% |
| ! | TATAGAGCTGATACAAGTTT+TGG | - | chr7.3:5604082-5604101 | MS.gene072713:intron | 30.0% |
| ! | TATGGATGGTTAATTTGACT+TGG | - | chr7.3:5603420-5603439 | MS.gene072713:intron | 30.0% |
| !! | ATTTCAGGATTTTGAGAAAC+AGG | - | chr7.3:5603460-5603479 | MS.gene072713:intron | 30.0% |
| !! | TTTTGTTTCCCGACAATAAT+TGG | - | chr7.3:5604818-5604837 | MS.gene072713:intron | 30.0% |
| AAAGATGAAGGAATGAAGGA+GGG | + | chr7.3:5604957-5604976 | None:intergenic | 35.0% | |
| AAGTGCAAAAAACGAAATGG+TGG | + | chr7.3:5604923-5604942 | None:intergenic | 35.0% | |
| CTAAAAGTTCCCAAACTAAG+TGG | + | chr7.3:5605316-5605335 | None:intergenic | 35.0% | |
| CTGTTCGATTCAGTTTAGAA+TGG | - | chr7.3:5604760-5604779 | MS.gene072713:intron | 35.0% | |
| CTTAGACCGAAACAAAACTT+GGG | + | chr7.3:5604797-5604816 | None:intergenic | 35.0% | |
| CTTTCCCTTCATATTGTTGA+TGG | - | chr7.3:5604586-5604605 | MS.gene072713:intron | 35.0% | |
| GAAAGTTGCTGAGATTGTTA+TGG | - | chr7.3:5603332-5603351 | MS.gene072713:CDS | 35.0% | |
| GAGAGAGTAATAACTTTAGC+TGG | + | chr7.3:5604302-5604321 | None:intergenic | 35.0% | |
| GTCTTCATGTTCCTTTGATA+TGG | - | chr7.3:5604460-5604479 | MS.gene072713:intron | 35.0% | |
| TAAGTGGTAGCAGATGAAAT+TGG | + | chr7.3:5605300-5605319 | None:intergenic | 35.0% | |
| TCGATAGCACCAATTATTGT+CGG | + | chr7.3:5604830-5604849 | None:intergenic | 35.0% | |
| TTAGCAAACACATGTATGAC+AGG | - | chr7.3:5604610-5604629 | MS.gene072713:intron | 35.0% | |
| ! | ATTGCAAATTTGGCAGCTTT+TGG | + | chr7.3:5603662-5603681 | None:intergenic | 35.0% |
| !! | GATTTGGATTTTAGAGGTGA+TGG | + | chr7.3:5605075-5605094 | None:intergenic | 35.0% |
| !! | GATTTTGAGAAACAGGCAAT+CGG | - | chr7.3:5603467-5603486 | MS.gene072713:intron | 35.0% |
| !!! | AGCATGTGTTTTTTGTGGAT+GGG | - | chr7.3:5604873-5604892 | MS.gene072713:intron | 35.0% |
| !!! | GCTGGAGTTGTTTTTACAAT+AGG | + | chr7.3:5604284-5604303 | None:intergenic | 35.0% |
| !!! | GTTAGAGCATGTGTTTTTTG+TGG | - | chr7.3:5604868-5604887 | MS.gene072713:intron | 35.0% |
| !!! | GTTTTGTTTTTCTCTTGCAG+TGG | - | chr7.3:5605391-5605410 | MS.gene072713:intron | 35.0% |
| AAAGGAACATGAAGACAGAG+AGG | + | chr7.3:5604456-5604475 | None:intergenic | 40.0% | |
| ACAACTTACTTTGTTGCAGG+TGG | - | chr7.3:5603581-5603600 | MS.gene072713:intron | 40.0% | |
| ACCTGAACACCTTTGACATA+AGG | + | chr7.3:5604711-5604730 | None:intergenic | 40.0% | |
| CAAAGATGAAGGAATGAAGG+AGG | + | chr7.3:5604958-5604977 | None:intergenic | 40.0% | |
| CAACTTACTTTGTTGCAGGT+GGG | - | chr7.3:5603582-5603601 | MS.gene072713:intron | 40.0% | |
| CATAAGGCAACTACTCTGAA+CGG | + | chr7.3:5604695-5604714 | None:intergenic | 40.0% | |
| CATCTGCTACCACTTAGTTT+GGG | - | chr7.3:5605304-5605323 | MS.gene072713:intron | 40.0% | |
| CATTTCGGAGCTAGAACAAA+AGG | - | chr7.3:5603521-5603540 | MS.gene072713:intron | 40.0% | |
| CCTTAGACCGAAACAAAACT+TGG | + | chr7.3:5604798-5604817 | None:intergenic | 40.0% | |
| CGATAGCACCAATTATTGTC+GGG | + | chr7.3:5604829-5604848 | None:intergenic | 40.0% | |
| GACACTACTTGTGAAAATGG+TGG | + | chr7.3:5604334-5604353 | None:intergenic | 40.0% | |
| GAGTAGTTGCCTTATGTCAA+AGG | - | chr7.3:5604699-5604718 | MS.gene072713:intron | 40.0% | |
| GCGCAAGATGCAATACATTT+CGG | - | chr7.3:5603506-5603525 | MS.gene072713:intron | 40.0% | |
| GTAGCAGATGAAATTGGTCA+CGG | + | chr7.3:5605294-5605313 | None:intergenic | 40.0% | |
| TCATCTGCTACCACTTAGTT+TGG | - | chr7.3:5605303-5605322 | MS.gene072713:intron | 40.0% | |
| TGCACAACTTACTTTGTTGC+AGG | - | chr7.3:5603578-5603597 | MS.gene072713:intron | 40.0% | |
| ! | AAGTTGTGCAGAAAGTGTAG+TGG | + | chr7.3:5603568-5603587 | None:intergenic | 40.0% |
| ! | CTCTATCAACTGTCGTTTCA+TGG | - | chr7.3:5604053-5604072 | MS.gene072713:intron | 40.0% |
| ! | GCTCAAAGGAGTACAAAATC+TGG | + | chr7.3:5604661-5604680 | None:intergenic | 40.0% |
| ! | GCTGCTCTATTTTCTACCAT+TGG | - | chr7.3:5604521-5604540 | MS.gene072713:intron | 40.0% |
| !! | CATCTTTGAAGCTGCATGAA+GGG | + | chr7.3:5605429-5605448 | None:intergenic | 40.0% |
| !! | TCATCTTTGAAGCTGCATGA+AGG | + | chr7.3:5605430-5605449 | None:intergenic | 40.0% |
| !!! | CAAAGGTGTTCAGGTGTTTT+AGG | - | chr7.3:5604716-5604735 | MS.gene072713:intron | 40.0% |
| !!! | CCAAGTTTTGTTTCGGTCTA+AGG | - | chr7.3:5604795-5604814 | MS.gene072713:intron | 40.0% |
| !!! | GAGCATGTGTTTTTTGTGGA+TGG | - | chr7.3:5604872-5604891 | MS.gene072713:intron | 40.0% |
| !!! | GCATGTGTTTTTTGTGGATG+GGG | - | chr7.3:5604874-5604893 | MS.gene072713:intron | 40.0% |
| GGAGCTGTAATGACATGTAC+AGG | + | chr7.3:5605248-5605267 | None:intergenic | 45.0% | |
| TACCTGCTGGAAAACGATGA+AGG | + | chr7.3:5604994-5605013 | None:intergenic | 45.0% | |
| TGAAATTGGTCACGGTGAGA+AGG | + | chr7.3:5605286-5605305 | None:intergenic | 45.0% | |
| TTGTTATGGCTGATCCGAAG+CGG | - | chr7.3:5603346-5603365 | MS.gene072713:intron | 45.0% | |
| ! | ATCCTTCATCGTTTTCCAGC+AGG | - | chr7.3:5604989-5605008 | MS.gene072713:intron | 45.0% |
| ! | CAAATTTGGCAGCTTTTGGC+AGG | + | chr7.3:5603658-5603677 | None:intergenic | 45.0% |
| !! | CTTGATGGTGACGAAGCTTT+AGG | + | chr7.3:5605110-5605129 | None:intergenic | 45.0% |
| !! | GAGATCTAAGAAGTACCTGC+TGG | + | chr7.3:5605007-5605026 | None:intergenic | 45.0% |
| !! | GCCTTATGTCAAAGGTGTTC+AGG | - | chr7.3:5604707-5604726 | MS.gene072713:intron | 45.0% |
| !! | TTAGAGGTGATGGAGACACA+CGG | + | chr7.3:5605065-5605084 | None:intergenic | 45.0% |
| GGAACATGAAGACAGAGAGG+AGG | + | chr7.3:5604453-5604472 | None:intergenic | 50.0% | |
| TGTTATGGCTGATCCGAAGC+GGG | - | chr7.3:5603347-5603366 | MS.gene072713:intron | 50.0% | |
| !!! | GTGTTTTTTGTGGATGGGGC+TGG | - | chr7.3:5604878-5604897 | MS.gene072713:intron | 50.0% |
| CGGCAGCAGTTTCTGCTCAA+AGG | + | chr7.3:5604675-5604694 | None:intergenic | 55.0% | |
| TAGCACCTCTTAGCCCGCTT+CGG | + | chr7.3:5603363-5603382 | None:intergenic | 55.0% | |
| !! | CTGATCCGAAGCGGGCTAAG+AGG | - | chr7.3:5603355-5603374 | MS.gene072713:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 5603321 | 5605449 | 5603321 | ID=MS.gene072713 |
| chr7.3 | mRNA | 5603321 | 5605449 | 5603321 | ID=MS.gene072713.t1;Parent=MS.gene072713 |
| chr7.3 | exon | 5605394 | 5605449 | 5605394 | ID=MS.gene072713.t1.exon1;Parent=MS.gene072713.t1 |
| chr7.3 | CDS | 5605394 | 5605449 | 5605394 | ID=cds.MS.gene072713.t1;Parent=MS.gene072713.t1 |
| chr7.3 | exon | 5605171 | 5605303 | 5605171 | ID=MS.gene072713.t1.exon2;Parent=MS.gene072713.t1 |
| chr7.3 | CDS | 5605171 | 5605303 | 5605171 | ID=cds.MS.gene072713.t1;Parent=MS.gene072713.t1 |
| chr7.3 | exon | 5603321 | 5603359 | 5603321 | ID=MS.gene072713.t1.exon3;Parent=MS.gene072713.t1 |
| chr7.3 | CDS | 5603321 | 5603359 | 5603321 | ID=cds.MS.gene072713.t1;Parent=MS.gene072713.t1 |
| Gene Sequence |
| Protein sequence |
