AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene07278

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07278.t1 MTR_1g087140 96.192 1103 37 4 7 1105 1 1102 0.0 2182
MS.gene07278.t1 MTR_1g090850 61.887 1102 346 20 10 1096 3 1045 0.0 1228
MS.gene07278.t1 MTR_8g075340 29.529 552 338 17 148 674 210 735 1.69e-43 172
MS.gene07278.t1 MTR_8g075340 30.808 198 114 7 912 1087 957 1153 6.31e-16 83.6
MS.gene07278.t1 MTR_5g022470 34.133 375 225 9 303 674 418 773 1.12e-41 167
MS.gene07278.t1 MTR_5g022470 33.690 374 228 9 303 674 418 773 1.26e-41 167
MS.gene07278.t1 MTR_5g022470 34.483 145 71 4 966 1087 1040 1183 9.50e-16 83.2
MS.gene07278.t1 MTR_8g019680 64.948 97 29 2 1002 1096 53 146 1.16e-35 133
MS.gene07278.t1 MTR_8g080770 28.325 406 222 12 383 770 272 626 1.72e-30 130
MS.gene07278.t1 MTR_8g080770 31.884 138 70 6 973 1097 729 855 6.94e-13 73.6
MS.gene07278.t1 MTR_3g085130 28.251 446 254 17 272 678 102 520 3.77e-30 129
MS.gene07278.t1 MTR_3g085130 32.847 137 69 6 973 1097 693 818 1.55e-13 75.9
MS.gene07278.t1 MTR_8g080770 28.079 406 223 12 383 770 381 735 4.39e-30 129
MS.gene07278.t1 MTR_8g080770 31.884 138 70 6 973 1097 838 964 7.18e-13 73.6
MS.gene07278.t1 MTR_3g085130 28.027 446 255 17 272 678 312 730 2.08e-29 127
MS.gene07278.t1 MTR_3g085130 32.099 162 84 8 948 1097 881 1028 1.76e-13 75.9
MS.gene07278.t1 MTR_5g097410 25.833 360 215 11 351 685 576 908 3.82e-23 107
MS.gene07278.t1 MTR_5g097410 33.333 150 62 7 976 1099 1074 1211 4.72e-12 71.2
MS.gene07278.t1 MTR_8g106150 26.344 372 220 9 351 684 97 452 4.14e-22 103
MS.gene07278.t1 MTR_8g106150 33.113 151 76 5 964 1097 606 748 2.59e-14 78.2
MS.gene07278.t1 MTR_8g106150 26.075 372 221 9 351 684 340 695 4.41e-22 103
MS.gene07278.t1 MTR_8g106150 33.113 151 76 5 964 1097 849 991 3.50e-14 77.8
MS.gene07278.t1 MTR_3g105590 29.464 336 180 14 367 669 335 646 1.27e-19 95.5
MS.gene07278.t1 MTR_4g031150 26.503 366 205 11 364 708 359 681 3.43e-18 90.9
MS.gene07278.t1 MTR_1g013360 26.027 365 203 12 399 713 381 728 8.55e-18 89.7
MS.gene07278.t1 MTR_7g109150 27.459 244 137 7 454 690 393 603 1.00e-15 82.4
MS.gene07278.t1 MTR_8g063580 36.496 137 61 6 979 1102 15 138 6.87e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07278.t1 AT2G47430 38.066 1148 614 25 11 1101 12 1119 0.0 676
MS.gene07278.t1 AT2G17820 27.872 592 382 15 103 674 196 762 1.92e-44 176
MS.gene07278.t1 AT2G17820 31.658 199 97 7 927 1096 1004 1192 7.16e-16 83.6
MS.gene07278.t1 AT1G27320 26.316 532 297 19 272 769 315 785 9.99e-31 131
MS.gene07278.t1 AT2G01830 27.869 366 220 11 338 677 392 739 2.38e-28 124
MS.gene07278.t1 AT2G01830 36.296 135 68 4 973 1097 919 1045 2.91e-15 81.6
MS.gene07278.t1 AT2G01830 27.869 366 220 11 338 677 392 739 2.38e-28 124
MS.gene07278.t1 AT2G01830 36.296 135 68 4 973 1097 919 1045 2.91e-15 81.6
MS.gene07278.t1 AT2G01830 27.869 366 220 11 338 677 392 739 2.38e-28 124
MS.gene07278.t1 AT2G01830 36.296 135 68 4 973 1097 919 1045 2.91e-15 81.6
MS.gene07278.t1 AT2G01830 27.869 366 220 11 338 677 392 739 2.38e-28 124
MS.gene07278.t1 AT2G01830 36.296 135 68 4 973 1097 919 1045 2.91e-15 81.6
MS.gene07278.t1 AT2G01830 27.869 366 220 11 338 677 415 762 2.49e-28 124
MS.gene07278.t1 AT2G01830 36.296 135 68 4 973 1097 942 1068 3.09e-15 81.6
MS.gene07278.t1 AT2G01830 27.869 366 220 11 338 677 404 751 3.03e-28 123
MS.gene07278.t1 AT2G01830 36.765 136 66 5 973 1097 931 1057 3.11e-15 81.6
MS.gene07278.t1 AT5G35750 28.916 332 173 12 380 680 573 872 5.34e-25 113
MS.gene07278.t1 AT5G35750 31.544 149 68 5 973 1097 1032 1170 1.35e-11 69.7
MS.gene07278.t1 AT1G66340 27.532 316 178 9 378 686 323 594 5.19e-19 93.2
MS.gene07278.t1 AT5G10720 30.037 273 154 11 399 669 371 608 3.75e-18 90.9
MS.gene07278.t1 AT2G40940 25.538 325 185 9 364 676 309 588 2.44e-15 81.3

Find 204 sgRNAs with CRISPR-Local

Find 364 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTATGATTATATCTTAA+TGG 0.123404 1.4:-69473520 MS.gene07278:CDS
TTGCTACCCCATTGATATTA+TGG 0.146001 1.4:-69477788 MS.gene07278:CDS
GCTTATCTTGCAGGCCTTAT+TGG 0.151594 1.4:-69476809 MS.gene07278:CDS
GATAGTGTTGTTAGATATTA+TGG 0.179176 1.4:+69478209 None:intergenic
AGGTGACATTAGTAGAATTA+AGG 0.196080 1.4:+69478734 None:intergenic
TGTGATCTAGGTTCATTTCT+TGG 0.224149 1.4:+69473852 None:intergenic
ATTGATGCAAGTTGGATAAA+TGG 0.240438 1.4:-69478183 MS.gene07278:CDS
AGTTGTTACTAATTCAAAAT+TGG 0.240702 1.4:-69476762 MS.gene07278:CDS
GTTTCAATTCAAGCTGTTAA+TGG 0.241296 1.4:-69477907 MS.gene07278:CDS
GATGGAAAAGTTATTGTAAA+AGG 0.243895 1.4:-69477967 MS.gene07278:CDS
TCAAGGGACAAAATCATATT+TGG 0.248361 1.4:-69477998 MS.gene07278:CDS
TTCTGAACTTGGTTTCAAAT+TGG 0.254047 1.4:+69476736 None:intergenic
ACTGACTTGTGATTCTCTTT+AGG 0.274643 1.4:+69476022 None:intergenic
TTCACATGAATTTGCATCAT+TGG 0.275818 1.4:-69478148 MS.gene07278:CDS
CACAGGTTGGATATAGTATA+TGG 0.279878 1.4:+69478263 None:intergenic
AGCAAAAGCAAGACTCTTAT+TGG 0.282452 1.4:+69476853 None:intergenic
GATCTTCGTGCTTATCTTGC+AGG 0.288028 1.4:-69476818 MS.gene07278:CDS
TTCTTTCCACTTAATGGTTT+AGG 0.288577 1.4:+69473693 None:intergenic
ATTAGTAACAACTAATTTAG+AGG 0.290279 1.4:+69476772 None:intergenic
ACAAAAGTCCTATGTTAATC+TGG 0.291733 1.4:-69473772 MS.gene07278:CDS
AGTAAATGCTCTTTCTTGAT+AGG 0.295947 1.4:+69473231 None:intergenic
TTCCTGAGTTCGGTGGTAAT+TGG 0.302430 1.4:-69473893 MS.gene07278:CDS
TTTGAAACCAAGTTCAGAAT+TGG 0.304813 1.4:-69476732 MS.gene07278:CDS
TGCTACCCCATTGATATTAT+GGG 0.314042 1.4:-69477787 MS.gene07278:CDS
GTGTTAGCTGTCCCACAAAA+TGG 0.319563 1.4:-69477064 MS.gene07278:CDS
TTCATCTTTCATGATCTTGC+TGG 0.339861 1.4:-69479126 MS.gene07278:intron
ATGATTTACCTAGCAAATCT+TGG 0.341823 1.4:+69476678 None:intergenic
TTGGAAGGTACTTGTGATCT+AGG 0.351381 1.4:+69473840 None:intergenic
GCTGTTAAATTTACTGATGA+AGG 0.355175 1.4:-69476247 MS.gene07278:CDS
GGTGACATTAGTAGAATTAA+GGG 0.356467 1.4:+69478735 None:intergenic
ATTCAAGCTGTTAATGGTAA+TGG 0.357123 1.4:-69477901 MS.gene07278:CDS
GTAGATTGTTCCAAGTCATT+AGG 0.359195 1.4:-69473920 MS.gene07278:CDS
TCCAACCAAACAACTTTACT+AGG 0.359940 1.4:+69474020 None:intergenic
GTGATATCAAAACCATTTCA+TGG 0.361788 1.4:-69473945 MS.gene07278:CDS
CCAACAAGATCCATGTCTTA+TGG 0.374116 1.4:-69476083 MS.gene07278:CDS
ACAATTCGTACTGCTAGTTC+TGG 0.375945 1.4:-69474500 MS.gene07278:CDS
ATGCTCTTTCTTGATAGGTT+TGG 0.386579 1.4:+69473236 None:intergenic
ACACCTTTCTTCATTGCCAT+TGG 0.389100 1.4:+69476373 None:intergenic
GAGACAGTGAATTATGAGTA+TGG 0.390792 1.4:-69474566 MS.gene07278:CDS
TCACATGAATTTGCATCATT+GGG 0.392411 1.4:-69478147 MS.gene07278:CDS
GTATTTGAAGTGGATGATAC+AGG 0.399459 1.4:-69476055 MS.gene07278:CDS
TCAATCCTAGTAAAGTTGTT+TGG 0.399703 1.4:-69474025 MS.gene07278:CDS
TAGACACACACTTTCATCAT+TGG 0.402470 1.4:+69473821 None:intergenic
TTCTATTCCCATAATATCAA+TGG 0.403961 1.4:+69477780 None:intergenic
GTAGGAACTGGCTTGGGACT+TGG 0.405420 1.4:-69475956 MS.gene07278:CDS
GAGGGGCTAACATGGAGTTT+TGG 0.406382 1.4:+69474455 None:intergenic
AACACTCTTGTGGTTAGTCT+TGG 0.410012 1.4:+69476177 None:intergenic
AGTCTTCGGAGATGAGTTCT+AGG 0.419954 1.4:-69474244 MS.gene07278:CDS
ATCTTACAAAGCTTAGAAAA+TGG 0.421080 1.4:+69474074 None:intergenic
AACAATCTACTACCATGAAA+TGG 0.422179 1.4:+69473933 None:intergenic
ATTAGGCTTCTTCCTGAGTT+CGG 0.422475 1.4:-69473903 MS.gene07278:CDS
ACATTTCAATCAAACCAATA+AGG 0.422617 1.4:+69476795 None:intergenic
CAGTTGTTCATAGAGAGCTT+AGG 0.425096 1.4:-69474368 MS.gene07278:CDS
TTTGTTGATGATGATTTCAT+TGG 0.427329 1.4:+69478781 None:intergenic
TCATATTTGGCTACCAAAGA+TGG 0.429385 1.4:-69477985 MS.gene07278:CDS
ATGGCTACTTTGAGATCTCT+TGG 0.429609 1.4:-69473627 MS.gene07278:CDS
TTATATCTTAATGGATTGTC+AGG 0.430305 1.4:-69473511 MS.gene07278:intron
CCATAAGACATGGATCTTGT+TGG 0.432881 1.4:+69476083 None:intergenic
AGTTGTTCATAGAGAGCTTA+GGG 0.434205 1.4:-69474367 MS.gene07278:CDS
CCACCATACTCAATGAATAC+TGG 0.434464 1.4:-69479173 None:intergenic
TCCTAGTAAAGTTGTTTGGT+TGG 0.434623 1.4:-69474021 MS.gene07278:CDS
TTGGTCTCCAATTCTGAACT+TGG 0.436377 1.4:+69476725 None:intergenic
TCTATTCCCATAATATCAAT+GGG 0.437409 1.4:+69477781 None:intergenic
CATAAGACATGGATCTTGTT+GGG 0.439105 1.4:+69476084 None:intergenic
GACAAGCTGACCACTGAGAC+TGG 0.440049 1.4:-69473276 MS.gene07278:CDS
AAGAGTTCCTTTCAAAGCTA+TGG 0.440702 1.4:-69474192 MS.gene07278:CDS
CCTTTCAAAGCTATGGATCA+TGG 0.441919 1.4:-69474185 MS.gene07278:CDS
TCAAAGTTCACCGGAGTCTT+CGG 0.442260 1.4:-69474258 MS.gene07278:CDS
AATCCAAGTCATAAAGAAAA+GGG 0.444621 1.4:-69477028 MS.gene07278:CDS
CACTGTCTCATTCTCACATA+AGG 0.445103 1.4:+69474580 None:intergenic
GAAAGGTGTAGAAGTTGTAT+TGG 0.447417 1.4:-69476359 MS.gene07278:CDS
TCTGTTGGCCAAGTAGGAAC+TGG 0.448175 1.4:-69475968 MS.gene07278:CDS
TATCATCTTGATCAATTGCT+TGG 0.448900 1.4:+69473970 None:intergenic
GGAGACCAACTTAAAACAAA+TGG 0.449087 1.4:-69476711 MS.gene07278:CDS
TAATCCAAGTCATAAAGAAA+AGG 0.450153 1.4:-69477029 MS.gene07278:CDS
ATTATCATTGATGCAAATGC+AGG 0.450739 1.4:-69474098 MS.gene07278:CDS
GACACTCTTGATTGTAATGA+TGG 0.452822 1.4:-69477002 MS.gene07278:CDS
TATGTTAATCTGGGAAGAAA+AGG 0.456024 1.4:-69473762 MS.gene07278:CDS
ATGGTAATGGAGATCTAATA+AGG 0.458097 1.4:-69477888 MS.gene07278:CDS
GTTGTGTTATTGTAGGCATA+TGG 0.458179 1.4:-69478943 MS.gene07278:intron
GCCTCAAACCCATCCTTCAC+TGG 0.462390 1.4:+69473372 None:intergenic
GTCCCAAGCCAGTTCCTACT+TGG 0.464624 1.4:+69475960 None:intergenic
TAGGAACTGGCTTGGGACTT+GGG 0.466445 1.4:-69475955 MS.gene07278:CDS
GGCCAAGTAGGAACTGGCTT+GGG 0.467713 1.4:-69475962 MS.gene07278:CDS
GAGAATTCTGTTGGCCAAGT+AGG 0.471261 1.4:-69475974 MS.gene07278:CDS
AGAATAGGAGGGGTCTCTCT+TGG 0.472858 1.4:-69478069 MS.gene07278:CDS
GAAAATAGTGACATAATGTA+AGG 0.473865 1.4:-69473189 None:intergenic
TGATATTATGGGAATAGAAT+CGG 0.482331 1.4:-69477776 MS.gene07278:intron
TTGATCACTGAGCCATTACA+AGG 0.483090 1.4:+69476334 None:intergenic
GCCTCTGAGAGGGGCTAACA+TGG 0.484367 1.4:+69474447 None:intergenic
ACTTGGGATTGTGCAGTCAT+TGG 0.486079 1.4:-69475939 MS.gene07278:intron
TCCATTAAGATATAATCATA+AGG 0.487002 1.4:+69473519 None:intergenic
TCAGCTAGAATCAACAGAAT+AGG 0.488864 1.4:-69478084 MS.gene07278:CDS
AGCAATCCTAAACCATTAAG+TGG 0.490150 1.4:-69473699 MS.gene07278:CDS
GCCAGTGAAGGATGGGTTTG+AGG 0.491157 1.4:-69473373 MS.gene07278:CDS
TCTTGATAGGTTTGGTAATG+TGG 0.491525 1.4:+69473244 None:intergenic
TAATCAACACTACTCTCAAA+AGG 0.491934 1.4:+69473993 None:intergenic
TGATTTACCTAGCAAATCTT+GGG 0.494105 1.4:+69476679 None:intergenic
ATTCACGTGTGAAAGGTGAT+AGG 0.495625 1.4:-69476309 MS.gene07278:CDS
TTCAATGCTTGAAATAATAA+CGG 0.495873 1.4:+69478414 None:intergenic
GTTGTATTGGACCCTTGTAA+TGG 0.497519 1.4:-69476346 MS.gene07278:CDS
GGTATTGTGGACAAGGAAGT+TGG 0.498320 1.4:-69474641 MS.gene07278:CDS
TTGACACAAATCTCATACAT+AGG 0.498626 1.4:-69478378 MS.gene07278:CDS
CAAGTTAAAGAGAATTCTGT+TGG 0.500351 1.4:-69475983 MS.gene07278:CDS
CAAGATAAGCACGAAGATCA+TGG 0.500470 1.4:+69476822 None:intergenic
CAGGAAGAAGCCTAATGACT+TGG 0.500658 1.4:+69473910 None:intergenic
AGGAGGATTAGTAAAATCCT+TGG 0.504201 1.4:+69473539 None:intergenic
TTCTAGGTACGTTTGATGCA+TGG 0.504400 1.4:-69474671 MS.gene07278:intron
TATGCTGAGAAAGATTTGTA+TGG 0.505750 1.4:-69473646 MS.gene07278:CDS
ATTCCAGTGTCATGGTTCAC+AGG 0.507966 1.4:+69478246 None:intergenic
CATCCAATGGCAATGAAGAA+AGG 0.508058 1.4:-69476376 MS.gene07278:CDS
CAGTGTCATGGTTCACAGGT+TGG 0.508152 1.4:+69478250 None:intergenic
GACAGATGCCAGTGAAGGAT+GGG 0.510140 1.4:-69473380 MS.gene07278:intron
CCATGATCCATAGCTTTGAA+AGG 0.512640 1.4:+69474185 None:intergenic
AATGAATACTGGTTTATCAA+TGG 0.512649 1.4:-69479162 MS.gene07278:CDS
CAAAAGTCCTATGTTAATCT+GGG 0.514695 1.4:-69473771 MS.gene07278:CDS
GACAAGGAAGTTGGCAAAAG+AGG 0.518131 1.4:-69474632 MS.gene07278:CDS
ATGATAATCAAAACAAAACT+TGG 0.518308 1.4:+69474113 None:intergenic
TGGAGATCTAATAAGGAATG+AGG 0.518743 1.4:-69477881 MS.gene07278:CDS
CTATCAATATTGATGCAAGT+TGG 0.529019 1.4:-69478191 MS.gene07278:CDS
CGTTTGATGCATGGAGACAT+TGG 0.531016 1.4:-69474662 MS.gene07278:CDS
GGACAGATGCCAGTGAAGGA+TGG 0.536750 1.4:-69473381 MS.gene07278:intron
GAGCTTAGGGATTAAAGTCA+AGG 0.538142 1.4:-69474354 MS.gene07278:CDS
GAAGGCTCAGGCCTCTGAGA+GGG 0.538284 1.4:+69474437 None:intergenic
AATTGTGCCCAAGATTTGCT+AGG 0.541010 1.4:-69476686 MS.gene07278:intron
GACAATGCGAGTGATATAAT+CGG 0.541959 1.4:+69478026 None:intergenic
CTTTCTCTCAGCTTGTTCTG+TGG 0.542457 1.4:+69476880 None:intergenic
ATCTCATACATAGGAATGGA+AGG 0.542582 1.4:-69478369 MS.gene07278:CDS
TATGAGTATGGATCAACCTC+AGG 0.543399 1.4:-69474554 MS.gene07278:CDS
CATTCTTTACATTACTGATG+AGG 0.545789 1.4:-69474408 MS.gene07278:CDS
CTCGCATTGTCGATCGTCAA+GGG 0.547004 1.4:-69478014 MS.gene07278:CDS
TATTTGAAGTGGATGATACA+GGG 0.550570 1.4:-69476054 MS.gene07278:CDS
CAAGGTGAAATAGAAGAAAG+TGG 0.553365 1.4:-69473729 MS.gene07278:CDS
GCTAGAATCAACAGAATAGG+AGG 0.555811 1.4:-69478081 MS.gene07278:CDS
GACACAAGCAAGATTGAGGC+AGG 0.556358 1.4:-69476466 MS.gene07278:CDS
TGTACTCTAACTCATCTAGT+GGG 0.561197 1.4:-69478302 MS.gene07278:CDS
ACTATTGACCAATGTGAGAA+TGG 0.561890 1.4:-69473597 MS.gene07278:CDS
AGAGAGATGGAGAAACACTA+TGG 0.561980 1.4:-69473336 MS.gene07278:CDS
ATCAAACATTCACGTGTGAA+AGG 0.562833 1.4:-69476316 MS.gene07278:CDS
ACAAATCTCATACATAGGAA+TGG 0.563392 1.4:-69478373 MS.gene07278:CDS
AGCAAGATCATGAAAGATGA+AGG 0.564158 1.4:+69479128 None:intergenic
CTGTTAAATTTACTGATGAA+GGG 0.567152 1.4:-69476246 MS.gene07278:CDS
GACACCATGTTGGTATCTCA+TGG 0.568120 1.4:-69478896 MS.gene07278:CDS
TGGCCAAGTAGGAACTGGCT+TGG 0.570068 1.4:-69475963 MS.gene07278:CDS
TCTTGCAAGGAGCAAGCTGT+TGG 0.570849 1.4:-69477850 MS.gene07278:CDS
AGGATGGGTTTGAGGCAACA+AGG 0.571342 1.4:-69473365 MS.gene07278:CDS
ACTCGCATTGTCGATCGTCA+AGG 0.572216 1.4:-69478015 MS.gene07278:CDS
AGTTGATTTGTATCATCCAA+TGG 0.573037 1.4:-69476389 MS.gene07278:CDS
ATGTAAAGAATGACATGTGA+AGG 0.573120 1.4:+69474419 None:intergenic
CACACACTTTCATCATTGGA+AGG 0.574607 1.4:+69473825 None:intergenic
GGAGATCTAATAAGGAATGA+GGG 0.576644 1.4:-69477880 MS.gene07278:CDS
GTGTTATGAAACATTTGTCT+TGG 0.576661 1.4:-69476159 MS.gene07278:CDS
GGCTGTGAGAACTGTTCAAG+AGG 0.577188 1.4:-69473568 MS.gene07278:CDS
ATCCAATTACCACCGAACTC+AGG 0.583478 1.4:+69473891 None:intergenic
GCTGACCACTGAGACTGGAA+TGG 0.584171 1.4:-69473271 MS.gene07278:CDS
ACTTGACACAAGCAAGATTG+AGG 0.587753 1.4:-69476470 MS.gene07278:CDS
TATCAGTGATCAAAGTTCAC+CGG 0.592353 1.4:-69474267 MS.gene07278:CDS
TTGCCTCATTGACACCATGT+TGG 0.593071 1.4:-69478906 MS.gene07278:CDS
AAGTGTGGAACAATGTTGGA+AGG 0.593740 1.4:-69473799 MS.gene07278:CDS
GCATGGAGACATTGGTATTG+TGG 0.595262 1.4:-69474654 MS.gene07278:CDS
AGAAAAGGTTCTGTTCATCA+AGG 0.596627 1.4:-69473747 MS.gene07278:CDS
CCTCTTCACCATTCTCACAT+TGG 0.597986 1.4:+69473589 None:intergenic
ATACAAATCTTTCTCAGCAT+AGG 0.598094 1.4:+69473648 None:intergenic
AGGCTTCTTCCTGAGTTCGG+TGG 0.599749 1.4:-69473900 MS.gene07278:CDS
GGCACATAACAGTTAGAGCA+TGG 0.600016 1.4:-69476225 MS.gene07278:CDS
TGATTTATCCTCTCTCCTTG+AGG 0.602251 1.4:-69476416 MS.gene07278:CDS
TGAGGGAGCTGTATCTTGCA+AGG 0.603521 1.4:-69477863 MS.gene07278:CDS
AAGGCTCAGGCCTCTGAGAG+GGG 0.603713 1.4:+69474438 None:intergenic
AGAATGACATGTGAAGGCTC+AGG 0.609075 1.4:+69474425 None:intergenic
AACAAGGGAGATAAGAGAGA+TGG 0.610075 1.4:-69473349 MS.gene07278:CDS
GAAGTGGATGATACAGGGAA+AGG 0.611039 1.4:-69476049 MS.gene07278:CDS
GTCTAAGTGTGGAACAATGT+TGG 0.612167 1.4:-69473803 MS.gene07278:CDS
ATGTACTCTAACTCATCTAG+TGG 0.614715 1.4:-69478303 MS.gene07278:CDS
GAACTCATCTCCGAAGACTC+CGG 0.615301 1.4:+69474248 None:intergenic
CAACCTGTGAACCATGACAC+TGG 0.615905 1.4:-69478249 MS.gene07278:CDS
AATGTTTCATAACACTCTTG+TGG 0.617188 1.4:+69476167 None:intergenic
AACTACATCCTCAAGGAGAG+AGG 0.617424 1.4:+69476408 None:intergenic
AGACATTGGTATTGTGGACA+AGG 0.619613 1.4:-69474648 MS.gene07278:CDS
TGTTCAAGAGGGTTTAACCA+AGG 0.619844 1.4:-69473556 MS.gene07278:CDS
GGATGGGTTTGAGGCAACAA+GGG 0.621462 1.4:-69473364 MS.gene07278:CDS
GTACTCTAACTCATCTAGTG+GGG 0.623166 1.4:-69478301 MS.gene07278:CDS
AACATGGTGTCAATGAGGCA+AGG 0.632743 1.4:+69478908 None:intergenic
AGTGTGGAACAATGTTGGAA+GGG 0.632865 1.4:-69473798 MS.gene07278:CDS
CTAGAATCAACAGAATAGGA+GGG 0.634091 1.4:-69478080 MS.gene07278:CDS
ACAAATCAACTACATCCTCA+AGG 0.638204 1.4:+69476401 None:intergenic
AATACAAAATCCATAAGACA+TGG 0.641986 1.4:+69476073 None:intergenic
GCTGTGAGAACTGTTCAAGA+GGG 0.647146 1.4:-69473567 MS.gene07278:CDS
TACTCTAACTCATCTAGTGG+GGG 0.650632 1.4:-69478300 MS.gene07278:CDS
CTTGGTGTGAACATCAGAGA+AGG 0.651051 1.4:+69478714 None:intergenic
CCAATGTGAGAATGGTGAAG+AGG 0.657628 1.4:-69473589 MS.gene07278:CDS
TGAAGGCTCAGGCCTCTGAG+AGG 0.658399 1.4:+69474436 None:intergenic
TGAAAGTGTGTGTCTAAGTG+TGG 0.660501 1.4:-69473814 MS.gene07278:CDS
TGTGAACCATGACACTGGAA+TGG 0.664217 1.4:-69478244 MS.gene07278:CDS
ATACCAACATGGTGTCAATG+AGG 0.665423 1.4:+69478903 None:intergenic
ATTAAGATATAATCATAAGG+AGG 0.668188 1.4:+69473522 None:intergenic
AATTGGACAGATGCCAGTGA+AGG 0.672213 1.4:-69473385 MS.gene07278:intron
TATGAGATTTGTGTCAAGTG+AGG 0.675612 1.4:+69478384 None:intergenic
GAAATCCATTCCAGTCTCAG+TGG 0.681772 1.4:+69473266 None:intergenic
TAGAATCAACAGAATAGGAG+GGG 0.688378 1.4:-69478079 MS.gene07278:CDS
TCCATGTTAGCCCCTCTCAG+AGG 0.694979 1.4:-69474448 MS.gene07278:CDS
TGATCACTGAGCCATTACAA+GGG 0.704208 1.4:+69476335 None:intergenic
CTTCTCTGATGTTCACACCA+AGG 0.706528 1.4:-69478713 MS.gene07278:intron
CTATTCCCATAATATCAATG+GGG 0.765530 1.4:+69477782 None:intergenic
GTGACCATGAGATACCAACA+TGG 0.814649 1.4:+69478892 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAGTAGTAAAATTATTTTT+TGG + chr1.4:69474743-69474762 None:intergenic 10.0%
!!! AAGTAGTAAAATTATTTTTT+GGG + chr1.4:69474742-69474761 None:intergenic 10.0%
!!! GTATTTGAATTTTTTTTTTA+TGG + chr1.4:69474936-69474955 None:intergenic 10.0%
!! ATAAGCAAACAAAATATTTA+TGG + chr1.4:69473698-69473717 None:intergenic 15.0%
!! CATTTAATAAAAATGTCAAA+TGG - chr1.4:69477654-69477673 MS.gene07278:intron 15.0%
!! TATCATTAAAAATCATCAAA+CGG + chr1.4:69474423-69474442 None:intergenic 15.0%
!!! AAAATATTTATGGTTTTGAA+GGG + chr1.4:69473688-69473707 None:intergenic 15.0%
!!! AACTAATTTTATTAAATGTC+AGG - chr1.4:69475260-69475279 MS.gene07278:intron 15.0%
!!! AATTGTTAATTTTTTCTCTA+GGG + chr1.4:69477838-69477857 None:intergenic 15.0%
!!! ATAACTTAAGCTTTATATTT+TGG - chr1.4:69478918-69478937 MS.gene07278:CDS 15.0%
!!! ATGATTTTTTTACAACTAAA+AGG + chr1.4:69477637-69477656 None:intergenic 15.0%
!!! GTGTTAAATTTTCAAATTAT+GGG + chr1.4:69475033-69475052 None:intergenic 15.0%
!!! TGATTTTTTTACAACTAAAA+GGG + chr1.4:69477636-69477655 None:intergenic 15.0%
!!! TGTGTTAAATTTTCAAATTA+TGG + chr1.4:69475034-69475053 None:intergenic 15.0%
!!! TTTTATTTTGTTACAATCTT+AGG - chr1.4:69475844-69475863 MS.gene07278:intron 15.0%
!! AAAAAATTCTTTCCACTTAA+TGG + chr1.4:69478668-69478687 None:intergenic 20.0%
!! AAATGTTTGATATATAAGAG+AGG + chr1.4:69476726-69476745 None:intergenic 20.0%
!! AAGAAGATCAAAAAAGAAAA+GGG - chr1.4:69478056-69478075 MS.gene07278:CDS 20.0%
!! AGTTCATATATGATATAGAA+AGG - chr1.4:69477453-69477472 MS.gene07278:intron 20.0%
!! AGTTGTTACTAATTCAAAAT+TGG - chr1.4:69475590-69475609 MS.gene07278:intron 20.0%
!! ATGATAATCAAAACAAAACT+TGG + chr1.4:69478242-69478261 None:intergenic 20.0%
!! ATTAAGATATAATCATAAGG+AGG + chr1.4:69478833-69478852 None:intergenic 20.0%
!! ATTAGTAACAACTAATTTAG+AGG + chr1.4:69475583-69475602 None:intergenic 20.0%
!! GTTAGTTAATATACTACTAT+TGG + chr1.4:69474666-69474685 None:intergenic 20.0%
!! TCCATTAAGATATAATCATA+AGG + chr1.4:69478836-69478855 None:intergenic 20.0%
!! TCCTTATGATTATATCTTAA+TGG - chr1.4:69478832-69478851 MS.gene07278:CDS 20.0%
!! TTAAGATTCAAATCATGAAT+TGG + chr1.4:69477592-69477611 None:intergenic 20.0%
!! TTAATTTATTTGCACTTTGT+AGG - chr1.4:69473910-69473929 MS.gene07278:CDS 20.0%
!! TTATGGAATGTGTTTATAAA+CGG + chr1.4:69474919-69474938 None:intergenic 20.0%
!! TTCAATGCTTGAAATAATAA+CGG + chr1.4:69473941-69473960 None:intergenic 20.0%
!! TTGTACTAAATAGTATATCA+CGG + chr1.4:69475783-69475802 None:intergenic 20.0%
!!! AAAGTACTATTTGGTATTTT+CGG + chr1.4:69474716-69474735 None:intergenic 20.0%
!!! AAATATCTTTGTAGCTTTAA+TGG - chr1.4:69473886-69473905 MS.gene07278:CDS 20.0%
!!! ATTAAGTGGAAAGAATTTTT+TGG - chr1.4:69478667-69478686 MS.gene07278:intron 20.0%
!!! ATTATCCATTTGTTTTAAGT+TGG + chr1.4:69475649-69475668 None:intergenic 20.0%
!!! ATTATTTGTTGTGTTATTGT+AGG - chr1.4:69473402-69473421 MS.gene07278:intron 20.0%
!!! CAAAATATTTATGGTTTTGA+AGG + chr1.4:69473689-69473708 None:intergenic 20.0%
!!! GAATTGTTAATTTTTTCTCT+AGG + chr1.4:69477839-69477858 None:intergenic 20.0%
!!! TAATGTAGTTAACAACTTTT+TGG - chr1.4:69477361-69477380 MS.gene07278:intron 20.0%
!!! TCTTTGAGTTAAAACTATTA+AGG + chr1.4:69475120-69475139 None:intergenic 20.0%
!!! TTGATTTGTAACAAAGATTA+AGG - chr1.4:69473318-69473337 MS.gene07278:CDS 20.0%
! AAAGACAAAATAGAAGTGAT+TGG + chr1.4:69477401-69477420 None:intergenic 25.0%
! AAGGGAAATTATACAAGAAA+TGG + chr1.4:69473670-69473689 None:intergenic 25.0%
! AATACAAAATCCATAAGACA+TGG + chr1.4:69476282-69476301 None:intergenic 25.0%
! AATCCAAGTCATAAAGAAAA+GGG - chr1.4:69475324-69475343 MS.gene07278:intron 25.0%
! ACATTTCAATCAAACCAATA+AGG + chr1.4:69475560-69475579 None:intergenic 25.0%
! AGGGAAATTATACAAGAAAT+GGG + chr1.4:69473669-69473688 None:intergenic 25.0%
! ATCTTACAAAGCTTAGAAAA+TGG + chr1.4:69478281-69478300 None:intergenic 25.0%
! ATGACATTTGTGAACATATT+TGG + chr1.4:69475197-69475216 None:intergenic 25.0%
! ATGTTCAAGAAGAAAAACAA+TGG - chr1.4:69478209-69478228 MS.gene07278:CDS 25.0%
! CAAGAAGATCAAAAAAGAAA+AGG - chr1.4:69478055-69478074 MS.gene07278:CDS 25.0%
! CTGTTAAATTTACTGATGAA+GGG - chr1.4:69476106-69476125 MS.gene07278:CDS 25.0%
! GATGGAAAAGTTATTGTAAA+AGG - chr1.4:69474385-69474404 MS.gene07278:CDS 25.0%
! TAATCCAAGTCATAAAGAAA+AGG - chr1.4:69475323-69475342 MS.gene07278:intron 25.0%
! TCTATTCCCATAATATCAAT+GGG + chr1.4:69474574-69474593 None:intergenic 25.0%
! TGATATTATGGGAATAGAAT+CGG - chr1.4:69474576-69474595 MS.gene07278:CDS 25.0%
! TGTTTCATTAGAATGAATCA+AGG + chr1.4:69477331-69477350 None:intergenic 25.0%
! TTAGTTGTCAATTCATTTAG+AGG - chr1.4:69476494-69476513 MS.gene07278:intron 25.0%
! TTCTATTCCCATAATATCAA+TGG + chr1.4:69474575-69474594 None:intergenic 25.0%
!! AAGTACTATTTGGTATTTTC+GGG + chr1.4:69474715-69474734 None:intergenic 25.0%
!! AGTTTTCTATTCTTGAATGT+TGG - chr1.4:69475396-69475415 MS.gene07278:intron 25.0%
!! GATAGTGTTGTTAGATATTA+TGG + chr1.4:69474146-69474165 None:intergenic 25.0%
!! TACAATAACTTTTCCATCTT+TGG + chr1.4:69474383-69474402 None:intergenic 25.0%
!! TATGGATTTTGTATTTGAAG+TGG - chr1.4:69476287-69476306 MS.gene07278:CDS 25.0%
!! TTAACTTTTCCACAATGAAT+TGG - chr1.4:69478950-69478969 MS.gene07278:intron 25.0%
!!! AATGTCAAATGGTTTTTTCT+AGG - chr1.4:69477665-69477684 MS.gene07278:intron 25.0%
!!! TTAATTTTTTCTCTAGGGTT+TGG + chr1.4:69477833-69477852 None:intergenic 25.0%
!!! TTATATCTTAATGGATTGTC+AGG - chr1.4:69478841-69478860 MS.gene07278:CDS 25.0%
!!! TTTGTTGATGATGATTTCAT+TGG + chr1.4:69473574-69473593 None:intergenic 25.0%
!!! TTTTTTTACAACTAAAAGGG+AGG + chr1.4:69477633-69477652 None:intergenic 25.0%
AACAATCTACTACCATGAAA+TGG + chr1.4:69478422-69478441 None:intergenic 30.0%
AATGTTTCATAACACTCTTG+TGG + chr1.4:69476188-69476207 None:intergenic 30.0%
ACAAAAGTCCTATGTTAATC+TGG - chr1.4:69478580-69478599 MS.gene07278:intron 30.0%
ACAAATCTCATACATAGGAA+TGG - chr1.4:69473979-69473998 MS.gene07278:CDS 30.0%
AGAGTCATATTGTTTGTGTT+GGG + chr1.4:69477263-69477282 None:intergenic 30.0%
AGGTGACATTAGTAGAATTA+AGG + chr1.4:69473621-69473640 None:intergenic 30.0%
AGTAAATGCTCTTTCTTGAT+AGG + chr1.4:69479124-69479143 None:intergenic 30.0%
ATACAAATCTTTCTCAGCAT+AGG + chr1.4:69478707-69478726 None:intergenic 30.0%
ATGATTTACCTAGCAAATCT+TGG + chr1.4:69475677-69475696 None:intergenic 30.0%
ATGTAAAGAATGACATGTGA+AGG + chr1.4:69477936-69477955 None:intergenic 30.0%
ATTATCATTGATGCAAATGC+AGG - chr1.4:69478254-69478273 MS.gene07278:CDS 30.0%
ATTCAAGCTGTTAATGGTAA+TGG - chr1.4:69474451-69474470 MS.gene07278:CDS 30.0%
ATTTATTTGCACTTTGTAGG+TGG - chr1.4:69473913-69473932 MS.gene07278:CDS 30.0%
CAAAAGTCCTATGTTAATCT+GGG - chr1.4:69478581-69478600 MS.gene07278:intron 30.0%
CAAGTTAAAGAGAATTCTGT+TGG - chr1.4:69476369-69476388 MS.gene07278:CDS 30.0%
CATTCTTTACATTACTGATG+AGG - chr1.4:69477944-69477963 MS.gene07278:CDS 30.0%
CCTATGAATAGGTAAAATGT+TGG + chr1.4:69477209-69477228 None:intergenic 30.0%
CTAGTGTTTGGATTAAGTAT+AGG + chr1.4:69477007-69477026 None:intergenic 30.0%
CTAGTGTTTGTATCAAGTAT+AGG + chr1.4:69476871-69476890 None:intergenic 30.0%
CTATCAATATTGATGCAAGT+TGG - chr1.4:69474161-69474180 MS.gene07278:CDS 30.0%
CTATTCCCATAATATCAATG+GGG + chr1.4:69474573-69474592 None:intergenic 30.0%
GACTCTTATCGTCTATAAAT+AGG + chr1.4:69476751-69476770 None:intergenic 30.0%
GCTACCAATGTTGTTAAATA+GGG - chr1.4:69475708-69475727 MS.gene07278:intron 30.0%
GCTGTTAAATTTACTGATGA+AGG - chr1.4:69476105-69476124 MS.gene07278:CDS 30.0%
GGTGACATTAGTAGAATTAA+GGG + chr1.4:69473620-69473639 None:intergenic 30.0%
GTGATATCAAAACCATTTCA+TGG - chr1.4:69478407-69478426 MS.gene07278:CDS 30.0%
GTGTTATGAAACATTTGTCT+TGG - chr1.4:69476193-69476212 MS.gene07278:CDS 30.0%
GTTTCAATTCAAGCTGTTAA+TGG - chr1.4:69474445-69474464 MS.gene07278:CDS 30.0%
TAATCAACACTACTCTCAAA+AGG + chr1.4:69478362-69478381 None:intergenic 30.0%
TAGAGTCATATTGTTTGTGT+TGG + chr1.4:69477264-69477283 None:intergenic 30.0%
TATCATCTTGATCAATTGCT+TGG + chr1.4:69478385-69478404 None:intergenic 30.0%
TATGCTGAGAAAGATTTGTA+TGG - chr1.4:69478706-69478725 MS.gene07278:intron 30.0%
TATGTTAATCTGGGAAGAAA+AGG - chr1.4:69478590-69478609 MS.gene07278:intron 30.0%
TCAAGGGACAAAATCATATT+TGG - chr1.4:69474354-69474373 MS.gene07278:CDS 30.0%
TCAATCCTAGTAAAGTTGTT+TGG - chr1.4:69478327-69478346 MS.gene07278:CDS 30.0%
TCACATGAATTTGCATCATT+GGG - chr1.4:69474205-69474224 MS.gene07278:CDS 30.0%
TGATTTACCTAGCAAATCTT+GGG + chr1.4:69475676-69475695 None:intergenic 30.0%
TGCTACCAATGTTGTTAAAT+AGG - chr1.4:69475707-69475726 MS.gene07278:intron 30.0%
TTCACATGAATTTGCATCAT+TGG - chr1.4:69474204-69474223 MS.gene07278:CDS 30.0%
TTCTGAACTTGGTTTCAAAT+TGG + chr1.4:69475619-69475638 None:intergenic 30.0%
TTCTTTCCACTTAATGGTTT+AGG + chr1.4:69478662-69478681 None:intergenic 30.0%
TTGACACAAATCTCATACAT+AGG - chr1.4:69473974-69473993 MS.gene07278:CDS 30.0%
TTTGCTAGGTAAATCATCAT+AGG - chr1.4:69475680-69475699 MS.gene07278:intron 30.0%
! AATCCCTTTTCTTTATGACT+TGG + chr1.4:69475330-69475349 None:intergenic 30.0%
! AGTCTTGGATTTTTGCAATT+TGG + chr1.4:69476163-69476182 None:intergenic 30.0%
! ATTGATGCAAGTTGGATAAA+TGG - chr1.4:69474169-69474188 MS.gene07278:CDS 30.0%
! CACACATTTTACCCATTTAT+AGG - chr1.4:69476780-69476799 MS.gene07278:CDS 30.0%
! CCAACATTTTACCTATTCAT+AGG - chr1.4:69477206-69477225 MS.gene07278:intron 30.0%
! TATTTGAAGTGGATGATACA+GGG - chr1.4:69476298-69476317 MS.gene07278:CDS 30.0%
! TTTGAAACCAAGTTCAGAAT+TGG - chr1.4:69475620-69475639 MS.gene07278:intron 30.0%
! TTTGGGTACAAAGTACTATT+TGG + chr1.4:69474725-69474744 None:intergenic 30.0%
! TTTTCACAAAACATCTCTCT+TGG - chr1.4:69474810-69474829 MS.gene07278:intron 30.0%
! TTTTCTTCCCAGATTAACAT+AGG + chr1.4:69478591-69478610 None:intergenic 30.0%
! TTTTTATTACCGAACTGTTG+TGG - chr1.4:69473746-69473765 MS.gene07278:CDS 30.0%
! TTTTTCACACACTACAATGA+TGG - chr1.4:69474010-69474029 MS.gene07278:CDS 30.0%
!! AGTTGATTTGTATCATCCAA+TGG - chr1.4:69475963-69475982 MS.gene07278:CDS 30.0%
!! ATGGTAATGGAGATCTAATA+AGG - chr1.4:69474464-69474483 MS.gene07278:CDS 30.0%
!!! TATTTTCGGGTACAAAAGTA+CGG + chr1.4:69474702-69474721 None:intergenic 30.0%
!!! TATTTTTTTTCTTTTCGCGC+TGG + chr1.4:69473871-69473890 None:intergenic 30.0%
AAAAATGCAACTAGAGGAAG+AGG - chr1.4:69475909-69475928 MS.gene07278:intron 35.0%
AAATGGGTAAAATGTGTGAG+TGG + chr1.4:69476778-69476797 None:intergenic 35.0%
AAATGTTGGAAACGTAAGAG+AGG + chr1.4:69477195-69477214 None:intergenic 35.0%
AAGAGTTCCTTTCAAAGCTA+TGG - chr1.4:69478160-69478179 MS.gene07278:CDS 35.0%
AATGTACTCTAGATTTGCGA+AGG - chr1.4:69473830-69473849 MS.gene07278:CDS 35.0%
ACAAATCAACTACATCCTCA+AGG + chr1.4:69475954-69475973 None:intergenic 35.0%
ACTATTGACCAATGTGAGAA+TGG - chr1.4:69478755-69478774 MS.gene07278:CDS 35.0%
ACTCATACGTGAAATTGATG+TGG - chr1.4:69475006-69475025 MS.gene07278:intron 35.0%
AGAAAAGGTTCTGTTCATCA+AGG - chr1.4:69478605-69478624 MS.gene07278:intron 35.0%
AGCAAAAGCAAGACTCTTAT+TGG + chr1.4:69475502-69475521 None:intergenic 35.0%
AGCAAGATCATGAAAGATGA+AGG + chr1.4:69473227-69473246 None:intergenic 35.0%
AGCAATCCTAAACCATTAAG+TGG - chr1.4:69478653-69478672 MS.gene07278:intron 35.0%
AGTTGTTCATAGAGAGCTTA+GGG - chr1.4:69477985-69478004 MS.gene07278:CDS 35.0%
ATCAAACATTCACGTGTGAA+AGG - chr1.4:69476036-69476055 MS.gene07278:CDS 35.0%
ATCTCATACATAGGAATGGA+AGG - chr1.4:69473983-69474002 MS.gene07278:CDS 35.0%
ATGCTCTTTCTTGATAGGTT+TGG + chr1.4:69479119-69479138 None:intergenic 35.0%
ATGTACTCTAACTCATCTAG+TGG - chr1.4:69474049-69474068 MS.gene07278:CDS 35.0%
CAAGGTGAAATAGAAGAAAG+TGG - chr1.4:69478623-69478642 MS.gene07278:intron 35.0%
CATAAGACATGGATCTTGTT+GGG + chr1.4:69476271-69476290 None:intergenic 35.0%
CATTATTGGGTGAATGCTTT+AGG - chr1.4:69476567-69476586 MS.gene07278:intron 35.0%
CTAGAATCAACAGAATAGGA+GGG - chr1.4:69474272-69474291 MS.gene07278:CDS 35.0%
GACAATGCGAGTGATATAAT+CGG + chr1.4:69474329-69474348 None:intergenic 35.0%
GACACTCTTGATTGTAATGA+TGG - chr1.4:69475350-69475369 MS.gene07278:intron 35.0%
GAGACAGTGAATTATGAGTA+TGG - chr1.4:69477786-69477805 MS.gene07278:CDS 35.0%
GGAGACCAACTTAAAACAAA+TGG - chr1.4:69475641-69475660 MS.gene07278:intron 35.0%
GGAGATCTAATAAGGAATGA+GGG - chr1.4:69474472-69474491 MS.gene07278:CDS 35.0%
GTAGATTGTTCCAAGTCATT+AGG - chr1.4:69478432-69478451 MS.gene07278:intron 35.0%
GTGTTTGGATTAAGTATAGG+AGG + chr1.4:69477004-69477023 None:intergenic 35.0%
GTGTTTGTATCAAGTATAGG+AGG + chr1.4:69476868-69476887 None:intergenic 35.0%
TACAAGAAATGGGTATACCT+TGG + chr1.4:69473659-69473678 None:intergenic 35.0%
TAGAATCAACAGAATAGGAG+GGG - chr1.4:69474273-69474292 MS.gene07278:CDS 35.0%
TAGACACACACTTTCATCAT+TGG + chr1.4:69478534-69478553 None:intergenic 35.0%
TATCAGTGATCAAAGTTCAC+CGG - chr1.4:69478085-69478104 MS.gene07278:CDS 35.0%
TATGAGATTTGTGTCAAGTG+AGG + chr1.4:69473971-69473990 None:intergenic 35.0%
TCAGCTAGAATCAACAGAAT+AGG - chr1.4:69474268-69474287 MS.gene07278:CDS 35.0%
TCATATTTGGCTACCAAAGA+TGG - chr1.4:69474367-69474386 MS.gene07278:CDS 35.0%
TCCAACCAAACAACTTTACT+AGG + chr1.4:69478335-69478354 None:intergenic 35.0%
TCCTAGTAAAGTTGTTTGGT+TGG - chr1.4:69478331-69478350 MS.gene07278:CDS 35.0%
TGCTACCCCATTGATATTAT+GGG - chr1.4:69474565-69474584 MS.gene07278:CDS 35.0%
TGGAGATCTAATAAGGAATG+AGG - chr1.4:69474471-69474490 MS.gene07278:CDS 35.0%
TGTACTCTAACTCATCTAGT+GGG - chr1.4:69474050-69474069 MS.gene07278:CDS 35.0%
TGTGATCTAGGTTCATTTCT+TGG + chr1.4:69478503-69478522 None:intergenic 35.0%
TGTGCCCTATTTAACAACAT+TGG + chr1.4:69475715-69475734 None:intergenic 35.0%
TTCATCTTTCATGATCTTGC+TGG - chr1.4:69473226-69473245 MS.gene07278:CDS 35.0%
TTGCTACCCCATTGATATTA+TGG - chr1.4:69474564-69474583 MS.gene07278:CDS 35.0%
TTGGATTAAGTATAGGAGGT+GGG + chr1.4:69477000-69477019 None:intergenic 35.0%
TTGTTAACGAGCTGCTATAA+TGG - chr1.4:69475807-69475826 MS.gene07278:intron 35.0%
TTTGGATTAAGTATAGGAGG+TGG + chr1.4:69477001-69477020 None:intergenic 35.0%
! AAGATGAGAGATCCATTTTG+TGG + chr1.4:69475303-69475322 None:intergenic 35.0%
! ACCTAATGCCTTAAGGTTTT+GGG + chr1.4:69477162-69477181 None:intergenic 35.0%
! ACCTTAAGGCATTAGGTATA+TGG - chr1.4:69477165-69477184 MS.gene07278:intron 35.0%
! AGATGAGAGATCCATTTTGT+GGG + chr1.4:69475302-69475321 None:intergenic 35.0%
! AGGAGGATTAGTAAAATCCT+TGG + chr1.4:69478816-69478835 None:intergenic 35.0%
! ATGACACTGGAATGGTTTTT+GGG - chr1.4:69474116-69474135 MS.gene07278:CDS 35.0%
! CACAGGTTGGATATAGTATA+TGG + chr1.4:69474092-69474111 None:intergenic 35.0%
! CCTTAAGGCATTAGGTATAT+GGG - chr1.4:69477166-69477185 MS.gene07278:intron 35.0%
! GAAAGGTGTAGAAGTTGTAT+TGG - chr1.4:69475993-69476012 MS.gene07278:CDS 35.0%
! GTATTTGAAGTGGATGATAC+AGG - chr1.4:69476297-69476316 MS.gene07278:CDS 35.0%
! GTTGTGTTATTGTAGGCATA+TGG - chr1.4:69473409-69473428 MS.gene07278:intron 35.0%
! TACCTAATGCCTTAAGGTTT+TGG + chr1.4:69477163-69477182 None:intergenic 35.0%
!! ACTGACTTGTGATTCTCTTT+AGG + chr1.4:69476333-69476352 None:intergenic 35.0%
!! GAAGAAAATAAAGAGTGCTG+AGG + chr1.4:69473295-69473314 None:intergenic 35.0%
!! TCTTGATAGGTTTGGTAATG+TGG + chr1.4:69479111-69479130 None:intergenic 35.0%
!!! ATTGTTGGGTTTTAAGTGAG+TGG + chr1.4:69476821-69476840 None:intergenic 35.0%
AACAAGGGAGATAAGAGAGA+TGG - chr1.4:69479003-69479022 MS.gene07278:intron 40.0%
AACAAGTGGTATTAGTGCCT+TGG + chr1.4:69477061-69477080 None:intergenic 40.0%
AAGTGTGGAACAATGTTGGA+AGG - chr1.4:69478553-69478572 MS.gene07278:intron 40.0%
ACAATTCGTACTGCTAGTTC+TGG - chr1.4:69477852-69477871 MS.gene07278:CDS 40.0%
ACACCTTTCTTCATTGCCAT+TGG + chr1.4:69475982-69476001 None:intergenic 40.0%
ACTTGACACAAGCAAGATTG+AGG - chr1.4:69475882-69475901 MS.gene07278:intron 40.0%
AGACATTGGTATTGTGGACA+AGG - chr1.4:69477704-69477723 MS.gene07278:intron 40.0%
AGAGAGATGGAGAAACACTA+TGG - chr1.4:69479016-69479035 MS.gene07278:intron 40.0%
AGGCACTAATACCACTTGTT+GGG - chr1.4:69477061-69477080 MS.gene07278:CDS 40.0%
AGGGAGAATCTTGGGTTTAT+GGG + chr1.4:69476967-69476986 None:intergenic 40.0%
AGTCTCACGTCACCTATAAA+TGG + chr1.4:69476795-69476814 None:intergenic 40.0%
AGTGTGGAACAATGTTGGAA+GGG - chr1.4:69478554-69478573 MS.gene07278:intron 40.0%
ATTAGGCTTCTTCCTGAGTT+CGG - chr1.4:69478449-69478468 MS.gene07278:intron 40.0%
ATTCACGTGTGAAAGGTGAT+AGG - chr1.4:69476043-69476062 MS.gene07278:CDS 40.0%
CAAAAACCATTCCAGTGTCA+TGG + chr1.4:69474117-69474136 None:intergenic 40.0%
CAAGATAAGCACGAAGATCA+TGG + chr1.4:69475533-69475552 None:intergenic 40.0%
CACACACTTTCATCATTGGA+AGG + chr1.4:69478530-69478549 None:intergenic 40.0%
CACTGTCTCATTCTCACATA+AGG + chr1.4:69477775-69477794 None:intergenic 40.0%
CAGTTGTTCATAGAGAGCTT+AGG - chr1.4:69477984-69478003 MS.gene07278:CDS 40.0%
CATCCAATGGCAATGAAGAA+AGG - chr1.4:69475976-69475995 MS.gene07278:CDS 40.0%
CCAACAAGATCCATGTCTTA+TGG - chr1.4:69476269-69476288 MS.gene07278:CDS 40.0%
CCATAAGACATGGATCTTGT+TGG + chr1.4:69476272-69476291 None:intergenic 40.0%
CCCATATACCTAATGCCTTA+AGG + chr1.4:69477169-69477188 None:intergenic 40.0%
CCTTTCAAAGCTATGGATCA+TGG - chr1.4:69478167-69478186 MS.gene07278:CDS 40.0%
CTCTTGTGGTTATGGAACAT+TGG + chr1.4:69477119-69477138 None:intergenic 40.0%
GAGCTTAGGGATTAAAGTCA+AGG - chr1.4:69477998-69478017 MS.gene07278:CDS 40.0%
GCTAGAATCAACAGAATAGG+AGG - chr1.4:69474271-69474290 MS.gene07278:CDS 40.0%
GTACTCTAACTCATCTAGTG+GGG - chr1.4:69474051-69474070 MS.gene07278:CDS 40.0%
GTCTAAGTGTGGAACAATGT+TGG - chr1.4:69478549-69478568 MS.gene07278:intron 40.0%
GTCTATGTCTCTTGTGGTTA+TGG + chr1.4:69477127-69477146 None:intergenic 40.0%
GTCTCACATTGCCTATGAAT+AGG + chr1.4:69477220-69477239 None:intergenic 40.0%
GTCTCACGTCACCTATAAAT+GGG + chr1.4:69476794-69476813 None:intergenic 40.0%
GTTGTATTGGACCCTTGTAA+TGG - chr1.4:69476006-69476025 MS.gene07278:CDS 40.0%
TACTCTAACTCATCTAGTGG+GGG - chr1.4:69474052-69474071 MS.gene07278:CDS 40.0%
TATGAGTATGGATCAACCTC+AGG - chr1.4:69477798-69477817 MS.gene07278:CDS 40.0%
TGATCACTGAGCCATTACAA+GGG + chr1.4:69476020-69476039 None:intergenic 40.0%
TGATTTATCCTCTCTCCTTG+AGG - chr1.4:69475936-69475955 MS.gene07278:intron 40.0%
TGTTCAAGAGGGTTTAACCA+AGG - chr1.4:69478796-69478815 MS.gene07278:CDS 40.0%
TTCTAGGTACGTTTGATGCA+TGG - chr1.4:69477681-69477700 MS.gene07278:intron 40.0%
TTGATCACTGAGCCATTACA+AGG + chr1.4:69476021-69476040 None:intergenic 40.0%
TTGGTCTCCAATTCTGAACT+TGG + chr1.4:69475630-69475649 None:intergenic 40.0%
! AAGGCACTAATACCACTTGT+TGG - chr1.4:69477060-69477079 MS.gene07278:CDS 40.0%
! AATTGTGCCCAAGATTTGCT+AGG - chr1.4:69475666-69475685 MS.gene07278:intron 40.0%
! ACCCAAAACCTTAAGGCATT+AGG - chr1.4:69477158-69477177 MS.gene07278:intron 40.0%
! ATACCAACATGGTGTCAATG+AGG + chr1.4:69473452-69473471 None:intergenic 40.0%
! CATGACACTGGAATGGTTTT+TGG - chr1.4:69474115-69474134 MS.gene07278:CDS 40.0%
! TGAAAGTGTGTGTCTAAGTG+TGG - chr1.4:69478538-69478557 MS.gene07278:intron 40.0%
! TGACACTGGAATGGTTTTTG+GGG - chr1.4:69474117-69474136 MS.gene07278:CDS 40.0%
!! AACACTCTTGTGGTTAGTCT+TGG + chr1.4:69476178-69476197 None:intergenic 40.0%
!! ATGGCTACTTTGAGATCTCT+TGG - chr1.4:69478725-69478744 MS.gene07278:CDS 40.0%
!! CCATGATCCATAGCTTTGAA+AGG + chr1.4:69478170-69478189 None:intergenic 40.0%
!! CGCGAAGGAAATTCACTTTT+TGG - chr1.4:69473793-69473812 MS.gene07278:CDS 40.0%
!! GTTTGTGTTGGGTTTCTAGT+AGG + chr1.4:69477252-69477271 None:intergenic 40.0%
!! TTGGAAGGTACTTGTGATCT+AGG + chr1.4:69478515-69478534 None:intergenic 40.0%
!!! TAATGCCTTAAGGTTTTGGG+TGG + chr1.4:69477159-69477178 None:intergenic 40.0%
AACAAGTGGTTGCAATGTGC+TGG + chr1.4:69476927-69476946 None:intergenic 45.0%
AACTACATCCTCAAGGAGAG+AGG + chr1.4:69475947-69475966 None:intergenic 45.0%
AATTGGACAGATGCCAGTGA+AGG - chr1.4:69478967-69478986 MS.gene07278:intron 45.0%
ACTCACTTGAGGGAGAATCT+TGG + chr1.4:69476976-69476995 None:intergenic 45.0%
ACTTGGGATTGTGCAGTCAT+TGG - chr1.4:69476413-69476432 MS.gene07278:CDS 45.0%
AGAATGACATGTGAAGGCTC+AGG + chr1.4:69477930-69477949 None:intergenic 45.0%
AGCACATTGCAACCACTTGT+TGG - chr1.4:69476926-69476945 MS.gene07278:CDS 45.0%
AGTCTTCGGAGATGAGTTCT+AGG - chr1.4:69478108-69478127 MS.gene07278:CDS 45.0%
ATAATGCTCCTGACTCTCCT+CGG + chr1.4:69476553-69476572 None:intergenic 45.0%
ATCCAATTACCACCGAACTC+AGG + chr1.4:69478464-69478483 None:intergenic 45.0%
ATTAGTGCCTTGGTTCAGCT+TGG + chr1.4:69477051-69477070 None:intergenic 45.0%
ATTCCAGTGTCATGGTTCAC+AGG + chr1.4:69474109-69474128 None:intergenic 45.0%
CAGGAAGAAGCCTAATGACT+TGG + chr1.4:69478445-69478464 None:intergenic 45.0%
CATCTCCACCCAAAACCTTA+AGG - chr1.4:69477151-69477170 MS.gene07278:intron 45.0%
CCAATGTGAGAATGGTGAAG+AGG - chr1.4:69478763-69478782 MS.gene07278:CDS 45.0%
CCACTTTGACCACAACAGTT+CGG + chr1.4:69473758-69473777 None:intergenic 45.0%
CCTCTTCACCATTCTCACAT+TGG + chr1.4:69478766-69478785 None:intergenic 45.0%
CGTTTGATGCATGGAGACAT+TGG - chr1.4:69477690-69477709 MS.gene07278:intron 45.0%
CTCACTTGAGGGAGAATCTT+GGG + chr1.4:69476975-69476994 None:intergenic 45.0%
CTTCTCTGATGTTCACACCA+AGG - chr1.4:69473639-69473658 MS.gene07278:CDS 45.0%
CTTGAGGGAGAGAGATTGTT+GGG + chr1.4:69476835-69476854 None:intergenic 45.0%
GAAATCCATTCCAGTCTCAG+TGG + chr1.4:69479089-69479108 None:intergenic 45.0%
GAAGTGGATGATACAGGGAA+AGG - chr1.4:69476303-69476322 MS.gene07278:CDS 45.0%
GACAAGGAAGTTGGCAAAAG+AGG - chr1.4:69477720-69477739 MS.gene07278:intron 45.0%
GACACCATGTTGGTATCTCA+TGG - chr1.4:69473456-69473475 MS.gene07278:intron 45.0%
GAGAATTCTGTTGGCCAAGT+AGG - chr1.4:69476378-69476397 MS.gene07278:CDS 45.0%
GAGGGAGAATCTTGGGTTTA+TGG + chr1.4:69476968-69476987 None:intergenic 45.0%
GATCTTCGTGCTTATCTTGC+AGG - chr1.4:69475534-69475553 MS.gene07278:intron 45.0%
GCACATTGCAACCACTTGTT+GGG - chr1.4:69476927-69476946 MS.gene07278:CDS 45.0%
GCATGGAGACATTGGTATTG+TGG - chr1.4:69477698-69477717 MS.gene07278:intron 45.0%
GCTGTGAGAACTGTTCAAGA+GGG - chr1.4:69478785-69478804 MS.gene07278:CDS 45.0%
GGAAGTGGGATTCTAGTGTT+TGG + chr1.4:69477019-69477038 None:intergenic 45.0%
GGCACATAACAGTTAGAGCA+TGG - chr1.4:69476127-69476146 MS.gene07278:CDS 45.0%
GGCAGGAAAAATGCAACTAG+AGG - chr1.4:69475903-69475922 MS.gene07278:intron 45.0%
GGCATCTGTCCAATTCATTG+TGG + chr1.4:69478962-69478981 None:intergenic 45.0%
GGGAGAATCTTGGGTTTATG+GGG + chr1.4:69476966-69476985 None:intergenic 45.0%
GGTATTGTGGACAAGGAAGT+TGG - chr1.4:69477711-69477730 MS.gene07278:intron 45.0%
GTGACCATGAGATACCAACA+TGG + chr1.4:69473463-69473482 None:intergenic 45.0%
GTGTTAGCTGTCCCACAAAA+TGG - chr1.4:69475288-69475307 MS.gene07278:intron 45.0%
TAAGTAGTTCGAGATCGCGA+AGG - chr1.4:69473778-69473797 MS.gene07278:CDS 45.0%
TCAAAGTTCACCGGAGTCTT+CGG - chr1.4:69478094-69478113 MS.gene07278:CDS 45.0%
TGGGGAATCTGAGGAAACAT+CGG - chr1.4:69477080-69477099 MS.gene07278:intron 45.0%
TGTGAACCATGACACTGGAA+TGG - chr1.4:69474108-69474127 MS.gene07278:CDS 45.0%
TGTGGTGTCTATGTCTCTTG+TGG + chr1.4:69477133-69477152 None:intergenic 45.0%
TTGCCTCATTGACACCATGT+TGG - chr1.4:69473446-69473465 MS.gene07278:intron 45.0%
! AACATGGTGTCAATGAGGCA+AGG + chr1.4:69473447-69473466 None:intergenic 45.0%
! CTTGGTGTGAACATCAGAGA+AGG + chr1.4:69473641-69473660 None:intergenic 45.0%
! CTTTCTCTCAGCTTGTTCTG+TGG + chr1.4:69475475-69475494 None:intergenic 45.0%
! GCTTATCTTGCAGGCCTTAT+TGG - chr1.4:69475543-69475562 MS.gene07278:intron 45.0%
! GGCACTAATACCACTTGTTG+GGG - chr1.4:69477062-69477081 MS.gene07278:CDS 45.0%
! TTCCTGAGTTCGGTGGTAAT+TGG - chr1.4:69478459-69478478 MS.gene07278:intron 45.0%
!! AGGAGAGTCAGGAGCATTAT+TGG - chr1.4:69476553-69476572 MS.gene07278:intron 45.0%
!! GGAGAGTCAGGAGCATTATT+GGG - chr1.4:69476554-69476573 MS.gene07278:intron 45.0%
!!! GGTTTGGTTTTTGTCACCTG+AGG + chr1.4:69477817-69477836 None:intergenic 45.0%
!!! TAAGGTTTTGGGTGGAGATG+TGG + chr1.4:69477151-69477170 None:intergenic 45.0%
ACAATCTGTTAGAGAGCCCG+AGG - chr1.4:69476533-69476552 MS.gene07278:intron 50.0%
ACTCGCATTGTCGATCGTCA+AGG - chr1.4:69474337-69474356 MS.gene07278:CDS 50.0%
AGAATAGGAGGGGTCTCTCT+TGG - chr1.4:69474283-69474302 MS.gene07278:CDS 50.0%
CAACCTGTGAACCATGACAC+TGG - chr1.4:69474103-69474122 MS.gene07278:CDS 50.0%
CAGTGTCATGGTTCACAGGT+TGG + chr1.4:69474105-69474124 None:intergenic 50.0%
CCGAACTGTTGTGGTCAAAG+TGG - chr1.4:69473755-69473774 MS.gene07278:CDS 50.0%
CTCGCATTGTCGATCGTCAA+GGG - chr1.4:69474338-69474357 MS.gene07278:CDS 50.0%
CTCTCTCTCTCTCTCTCTCA+TGG + chr1.4:69476594-69476613 None:intergenic 50.0%
CTTGGTGGAAGAGTGGAAGT+GGG + chr1.4:69477033-69477052 None:intergenic 50.0%
GAACTCATCTCCGAAGACTC+CGG + chr1.4:69478107-69478126 None:intergenic 50.0%
GACACAAGCAAGATTGAGGC+AGG - chr1.4:69475886-69475905 MS.gene07278:intron 50.0%
GACAGATGCCAGTGAAGGAT+GGG - chr1.4:69478972-69478991 MS.gene07278:intron 50.0%
GCTTGAGGGAGAGAGATTGT+TGG + chr1.4:69476836-69476855 None:intergenic 50.0%
GGAATCTGAGGAAACATCGG+GGG - chr1.4:69477083-69477102 MS.gene07278:intron 50.0%
GGCTGTGAGAACTGTTCAAG+AGG - chr1.4:69478784-69478803 MS.gene07278:CDS 50.0%
GGGAATCTGAGGAAACATCG+GGG - chr1.4:69477082-69477101 MS.gene07278:intron 50.0%
GGGGAATCTGAGGAAACATC+GGG - chr1.4:69477081-69477100 MS.gene07278:intron 50.0%
TAATGCTCCTGACTCTCCTC+GGG + chr1.4:69476552-69476571 None:intergenic 50.0%
TCCTCAGATTCCCCAACAAG+TGG + chr1.4:69477075-69477094 None:intergenic 50.0%
TCTGTTGGCCAAGTAGGAAC+TGG - chr1.4:69476384-69476403 MS.gene07278:CDS 50.0%
TCTTCCACCAAGCTGAACCA+AGG - chr1.4:69477041-69477060 MS.gene07278:CDS 50.0%
TCTTGCAAGGAGCAAGCTGT+TGG - chr1.4:69474502-69474521 MS.gene07278:CDS 50.0%
TGAGGGAGCTGTATCTTGCA+AGG - chr1.4:69474489-69474508 MS.gene07278:CDS 50.0%
! ACCACTTGTTGGGGAATCTG+AGG - chr1.4:69477071-69477090 MS.gene07278:CDS 50.0%
! AGGATGGGTTTGAGGCAACA+AGG - chr1.4:69478987-69479006 MS.gene07278:intron 50.0%
! CATTGCAACCACTTGTTGGG+CGG - chr1.4:69476930-69476949 MS.gene07278:CDS 50.0%
! GAGGGGCTAACATGGAGTTT+TGG + chr1.4:69477900-69477919 None:intergenic 50.0%
! GGATGGGTTTGAGGCAACAA+GGG - chr1.4:69478988-69479007 MS.gene07278:intron 50.0%
!! GTGGTTGCAATGTGCTGGTT+CGG + chr1.4:69476922-69476941 None:intergenic 50.0%
!! TAGGAACTGGCTTGGGACTT+GGG - chr1.4:69476397-69476416 MS.gene07278:CDS 50.0%
AGGAGGTGAGAACTCGCTTG+AGG + chr1.4:69476851-69476870 None:intergenic 55.0%
AGGAGGTGGGAACTCACTTG+AGG + chr1.4:69476987-69477006 None:intergenic 55.0%
AGGCTTCTTCCTGAGTTCGG+TGG - chr1.4:69478452-69478471 MS.gene07278:intron 55.0%
AGTGCCTTGGTTCAGCTTGG+TGG + chr1.4:69477048-69477067 None:intergenic 55.0%
CTCGGTGGAAGAGTGGAAGT+GGG + chr1.4:69476899-69476918 None:intergenic 55.0%
GACAAGCTGACCACTGAGAC+TGG - chr1.4:69479076-69479095 MS.gene07278:intron 55.0%
GCCTCAAACCCATCCTTCAC+TGG + chr1.4:69478983-69479002 None:intergenic 55.0%
GCTGACCACTGAGACTGGAA+TGG - chr1.4:69479081-69479100 MS.gene07278:intron 55.0%
GGAAACATCGGGGGCAACAA+CGG - chr1.4:69477092-69477111 MS.gene07278:intron 55.0%
GGACAGATGCCAGTGAAGGA+TGG - chr1.4:69478971-69478990 MS.gene07278:intron 55.0%
GGAGGTGAGAACTCGCTTGA+GGG + chr1.4:69476850-69476869 None:intergenic 55.0%
GGAGGTGGGAACTCACTTGA+GGG + chr1.4:69476986-69477005 None:intergenic 55.0%
GTCCCAAGCCAGTTCCTACT+TGG + chr1.4:69476395-69476414 None:intergenic 55.0%
TCCATGTTAGCCCCTCTCAG+AGG - chr1.4:69477904-69477923 MS.gene07278:CDS 55.0%
TGGCCAAGTAGGAACTGGCT+TGG - chr1.4:69476389-69476408 MS.gene07278:CDS 55.0%
! GCCAGTGAAGGATGGGTTTG+AGG - chr1.4:69478979-69478998 MS.gene07278:intron 55.0%
! GCTTGGTGGAAGAGTGGAAG+TGG + chr1.4:69477034-69477053 None:intergenic 55.0%
! GGCCAAGTAGGAACTGGCTT+GGG - chr1.4:69476390-69476409 MS.gene07278:CDS 55.0%
! GGTTCAGCTTGGTGGAAGAG+TGG + chr1.4:69477040-69477059 None:intergenic 55.0%
!! GTAGGAACTGGCTTGGGACT+TGG - chr1.4:69476396-69476415 MS.gene07278:CDS 55.0%
!! TGCAATGTGCTGGTTCGGCT+CGG + chr1.4:69476917-69476936 None:intergenic 55.0%
CCAACAGACCGCCCAACAAG+TGG + chr1.4:69476941-69476960 None:intergenic 60.0%
TAGAGAGCCCGAGGAGAGTC+AGG - chr1.4:69476542-69476561 MS.gene07278:intron 60.0%
TGAAGGCTCAGGCCTCTGAG+AGG + chr1.4:69477919-69477938 None:intergenic 60.0%
! AAGGCTCAGGCCTCTGAGAG+GGG + chr1.4:69477917-69477936 None:intergenic 60.0%
! CCACTTGTTGGGCGGTCTGT+TGG - chr1.4:69476938-69476957 MS.gene07278:CDS 60.0%
! GAAGGCTCAGGCCTCTGAGA+GGG + chr1.4:69477918-69477937 None:intergenic 60.0%
! GCCTCTGAGAGGGGCTAACA+TGG + chr1.4:69477908-69477927 None:intergenic 60.0%
! GCTCGGTGGAAGAGTGGAAG+TGG + chr1.4:69476900-69476919 None:intergenic 60.0%
!! AATGTGCTGGTTCGGCTCGG+TGG + chr1.4:69476914-69476933 None:intergenic 60.0%
!! GGTTCGGCTCGGTGGAAGAG+TGG + chr1.4:69476906-69476925 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 69473191 69479183 69473191 ID=MS.gene07278
chr1.4 mRNA 69473191 69479183 69473191 ID=MS.gene07278.t1;Parent=MS.gene07278
chr1.4 exon 69479127 69479183 69479127 ID=MS.gene07278.t1.exon1;Parent=MS.gene07278.t1
chr1.4 CDS 69479127 69479183 69479127 ID=cds.MS.gene07278.t1;Parent=MS.gene07278.t1
chr1.4 exon 69478714 69478950 69478714 ID=MS.gene07278.t1.exon2;Parent=MS.gene07278.t1
chr1.4 CDS 69478714 69478950 69478714 ID=cds.MS.gene07278.t1;Parent=MS.gene07278.t1
chr1.4 exon 69477777 69478442 69477777 ID=MS.gene07278.t1.exon3;Parent=MS.gene07278.t1
chr1.4 CDS 69477777 69478442 69477777 ID=cds.MS.gene07278.t1;Parent=MS.gene07278.t1
chr1.4 exon 69476687 69477092 69476687 ID=MS.gene07278.t1.exon4;Parent=MS.gene07278.t1
chr1.4 CDS 69476687 69477092 69476687 ID=cds.MS.gene07278.t1;Parent=MS.gene07278.t1
chr1.4 exon 69475940 69476508 69475940 ID=MS.gene07278.t1.exon5;Parent=MS.gene07278.t1
chr1.4 CDS 69475940 69476508 69475940 ID=cds.MS.gene07278.t1;Parent=MS.gene07278.t1
chr1.4 exon 69473512 69474687 69473512 ID=MS.gene07278.t1.exon6;Parent=MS.gene07278.t1
chr1.4 CDS 69473512 69474687 69473512 ID=cds.MS.gene07278.t1;Parent=MS.gene07278.t1
chr1.4 exon 69473191 69473397 69473191 ID=MS.gene07278.t1.exon7;Parent=MS.gene07278.t1
chr1.4 CDS 69473191 69473397 69473191 ID=cds.MS.gene07278.t1;Parent=MS.gene07278.t1
Gene Sequence

>MS.gene07278

ATGAATACTGGTTTATCAATGGCATTACTTCGACCTTCATCTTTCATGATCTTGCTGGTACGTCTTTATATTTATGCGTTCATGCTATTTTTCTTCATGTTCCTCAGCACTCTTTATTTTCTTCGATTTGATTTGTAACAAAGATTAAGGAACAATTGAGATTTGTTATTGATGTCTTCAACTAGCACATAGCTACACATAAATTTACGATATTATTTGTTGTGTTATTGTAGGCATATGGTGCACTAATAGTCCTTGCCTCATTGACACCATGTTGGTATCTCATGGTCACACATATTGAGAAAAGTGTGAATTTGCACTCAGCAAATATTGTGTCACAATTGCAATCAGAAATTGAGTACTCAGCTGAACTATTGCAACCAATGAAATCATCATCAACAAATTTATCTACATTATTGAGCTCAACCCTTAATTCTACTAATGTCACCTTCTCTGATGTTCACACCAAGGTATACCCATTTCTTGTATAATTTCCCTTCAAAACCATAAATATTTTGTTTGCTTATTTTTTATTATTTTTTATATCAAAATTATTTTTTATTACCGAACTGTTGTGGTCAAAGTGGTAAGTAGTTCGAGATCGCGAAGGAAATTCACTTTTTGGAGCGAAAACTCTTAAATGTACTCTAGATTTGCGAAGGAATTAAGTTTTCGCGCCAGCGCGAAAAGAAAAAAAATATCTTTGTAGCTTTAATGGTTTAATTTATTTGCACTTTGTAGGTGGCTCCGTTATTATTTCAAGCATTGAAGACAATTCCTCACTTGACACAAATCTCATACATAGGAATGGAAGGTCTTTTTTTCACACACTACAATGATGGTGATCAAGTTCTAGCAATGTACTCTAACTCATCTAGTGGGGGTGCTTCAAACAAAACCATATACTATATCCAACCTGTGAACCATGACACTGGAATGGTTTTTGGGGAAGCCATAATATCTAACAACACTATCAATATTGATGCAAGTTGGATAAATGGAACAAATAATATTTCACATGAATTTGCATCATTGGGAACAAAGTTGAATAATGTTAGTGATCTTTTGTTCATGAATTCAGCTAGAATCAACAGAATAGGAGGGGTCTCTCTTGGATTTTCGACGAAAGCAATAACCGATTATATCACTCGCATTGTCGATCGTCAAGGGACAAAATCATATTTGGCTACCAAAGATGGAAAAGTTATTGTAAAAGGAATTCAAAATATCCGTTTGATGATTTTTAATGATAGTGTTTCAATTCAAGCTGTTAATGGTAATGGAGATCTAATAAGGAATGAGGGAGCTGTATCTTGCAAGGAGCAAGCTGTTGGTTCTAGTTTGAATATTCATGATACTCAATATTTGATTCATTGCTACCCCATTGATATTATGGGAATAGAATCGGTACGTTTTTATATTTTTTGCATATTAGTTTGTTTGATTACGATGCAATTTTTTTTCAATTGATTCCAATAGTAGTATATTAACTAACTAAGAAAACAAGACCGTACTTTTGTACCCGAAAATACCAAATAGTACTTTGTACCCAAAAAATAATTTTACTACTTTCACAATACAATTTGCATATTAGTTCACACTTTAATATTTTTATACTATTTTCACAAAACATCTCTCTTGGTCTTGTATCTTATAATTGTTTTCTAATTTTATTTTTTATGCTACATTTTTCTCACTCTATTTCATTATTTATTTAAATAATCACCGTTTATAAACACATTCCATAAAAAAAAAATTCAAATACACATTGTTTACAACATTTATTTTAGATAAGTTTTAGCAACATTATTTCTAACTCATACGTGAAATTGATGTGGTCCCATAATTTGAAAATTTAACACACATTAATTGACATGAATTTCACTCAATAAGAAAGTGAACATTGTGTTTTTTTGTCGAACATAACCTTAATAGTTTTAACTCAAAGAAGAAGAAAAAAATAATCAAGTAATAATGACTTCAATTAACATGTGTTTAATTATCCAAATATGTTCACAAATGTCATGTATGTTTCAATTAACATGTAACTGAATATTTTTCTTATCTCTAACTAATTTTATTAAATGTCAGGTGCATGTGTTAGCTGTCCCACAAAATGGATCTCTCATCTTTAATCCAAGTCATAAAGAAAAGGGATTGACACTCTTGATTGTAATGATGGTGATGATATTTATTGCTATCTTGAGTTTTCTATTCTTGAATGTTGGAGTGACAAAGAGAGAAATGCATTTGTGTGCATCACTCATACAACAAAAAGAAGCCACAGAACAAGCTGAGAGAAAGAATACCAATAAGAGTCTTGCTTTTGCTACTGCTAGCCATGATCTTCGTGCTTATCTTGCAGGCCTTATTGGTTTGATTGAAATGTCCTCTAAATTAGTTGTTACTAATTCAAAATTGGACACCAATTTGAAACCAAGTTCAGAATTGGAGACCAACTTAAAACAAATGGATAATTGTGCCCAAGATTTGCTAGGTAAATCATCATAGGTTCATGCTACCAATGTTGTTAAATAGGGCACATTATAGTGTTACAACATAATTGAATTTAAACAAATTGTTGTTGTTCCGTGATATACTATTTAGTACAAAATATTGTTAACGAGCTGCTATAATGGCATCATTAACTCATTTTTATTTTGTTACAATCTTAGGACTGTTGAATTCTATACTTGACACAAGCAAGATTGAGGCAGGAAAAATGCAACTAGAGGAAGAGGAATTTGATTTATCCTCTCTCCTTGAGGATGTAGTTGATTTGTATCATCCAATGGCAATGAAGAAAGGTGTAGAAGTTGTATTGGACCCTTGTAATGGCTCAGTGATCAAACATTCACGTGTGAAAGGTGATAGGAGAAAATTGAAGCAAGTTTTGTGTAACTTGCTAAGCAATGCTGTTAAATTTACTGATGAAGGGCACATAACAGTTAGAGCATGGACTCAGAAAGCCAAATTGCAAAAATCCAAGACTAACCACAAGAGTGTTATGAAACATTTGTCTTGGTTGTTTAGTAAGAAAGACAAAGAATGTGAAGACATAGAAGCTGTGAATTTAGCCCAACAAGATCCATGTCTTATGGATTTTGTATTTGAAGTGGATGATACAGGGAAAGGTATTCCTAAAGAGAATCACAAGTCAGTGTTTGAGAATTATGTTCAAGTTAAAGAGAATTCTGTTGGCCAAGTAGGAACTGGCTTGGGACTTGGGATTGTGCAGTCATTGGTAAGCATATTTTTTATCTATTCAAATAATTGTGAGAAAATTTCGAGTTTATAGTTCACTTAGTTGTCAATTCATTTAGAGGTCATACTAAATTGAATACAATCTGTTAGAGAGCCCGAGGAGAGTCAGGAGCATTATTGGGTGAATGCTTTAGGACCATGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGACGTCAAGTCTCGATATATGTGTCACCTCTCTTATATATCAAACATTTTACCTATTTATAGACGATAAGAGTCTTAACCACTCACACATTTTACCCATTTATAGGTGACGTGAGACTTAACCACTCACTTAAAACCCAACAATCTCTCTCCCTCAAGCGAGTTCTCACCTCCTATACTTGATACAAACACTAGAAAATCCCACTTCCACTCTTCCACCGAGCCGAACCAGCACATTGCAACCACTTGTTGGGCGGTCTGTTGGAACCCCATAAACCCAAGATTCTCCCTCAAGTGAGTTCCCACCTCCTATACTTAATCCAAACACTAGAATCCCACTTCCACTCTTCCACCAAGCTGAACCAAGGCACTAATACCACTTGTTGGGGAATCTGAGGAAACATCGGGGGCAACAACGGACCAATGTTCCATAACCACAAGAGACATAGACACCACATCTCCACCCAAAACCTTAAGGCATTAGGTATATGGGTCACCTCTCTTACGTTTCCAACATTTTACCTATTCATAGGCAATGTGAGACTTAATCACTCCTACTAGAAACCCAACACAAACAATATGACTCTAATATGTATCTGTTTGAATATTGAATCACAATTCATTATGATGAACCTTGATTCATTCTAATGAAACATTACTAAACTTAATGTAGTTAACAACTTTTTGGTCAATTTTGTATAACCAATCACTTCTATTTTGTCTTTTAATATATGACTTGAATCTTGAATTATTTTGAAGTTCATATATGATATAGAAAGGTTAGCTTATAATTTTGTTATGTCACTTGATTTTTACTTAAAAATAAATTTTTATTGACAATGTAGCTTATGTTTCATAATAAGATTCGATTCACAATTCGAAAACAACATCTTCCAATTCATGATTTGAATCTTAATAGTATGCATACATTAGTCCTCCCTTTTAGTTGTAAAAAAATCATTTAATAAAAATGTCAAATGGTTTTTTCTAGGTACGTTTGATGCATGGAGACATTGGTATTGTGGACAAGGAAGTTGGCAAAAGAGGAACATGCTTCAAGTTCAATGTGCTTCTCACCTTATGTGAGAATGAGACAGTGAATTATGAGTATGGATCAACCTCAGGTGACAAAAACCAAACCCTAGAGAAAAAATTAACAATTCGTACTGCTAGTTCTGGTTCAAGCATTTGTTCTTTGAGTCCAAAACTCCATGTTAGCCCCTCTCAGAGGCCTGAGCCTTCACATGTCATTCTTTACATTACTGATGAGGAAAGAAGAAGAACTTCGCAGTTGTTCATAGAGAGCTTAGGGATTAAAGTCAAGGTTGTGAAGAGTAGAAATCATCTAATTCATACTCTCAAGAAGATCAAAAAAGAAAAGGGTGACGATATCAGTGATCAAAGTTCACCGGAGTCTTCGGAGATGAGTTCTAGGTGTACATCTTATAACTCTTCTTGTAGTAGAAGAGTTCCTTTCAAAGCTATGGATCATGGAAATGAATATCTATCTTCAATGTTCAAGAAGAAAAACAATGGAGCTGCACCAAGTTTTGTTTTGATTATCATTGATGCAAATGCAGGACCATTTTCTAAGCTTTGTAAGATTGTGTCAAACTTCAAGAAAGATCTTCTCAATCCTAGTAAAGTTGTTTGGTTGGAAAAGCCTTTTGAGAGTAGTGTTGATTACCAAGCAATTGATCAAGATGATATTGTGATATCAAAACCATTTCATGGTAGTAGATTGTTCCAAGTCATTAGGCTTCTTCCTGAGTTCGGTGGTAATTGGATAAGCAATTCTAGTAAACCAAGAAATGAACCTAGATCACAAGTACCTTCCAATGATGAAAGTGTGTGTCTAAGTGTGGAACAATGTTGGAAGGGAACACAAAAGTCCTATGTTAATCTGGGAAGAAAAGGTTCTGTTCATCAAGGTGAAATAGAAGAAAGTGGAGAATCAAGCAATCCTAAACCATTAAGTGGAAAGAATTTTTTGGTTGTTGATGATAGTCCTATGCTGAGAAAGATTTGTATGGCTACTTTGAGATCTCTTGGTGTGACTACTATTGACCAATGTGAGAATGGTGAAGAGGCTGTGAGAACTGTTCAAGAGGGTTTAACCAAGGATTTTACTAATCCTCCTTATGATTATATCTTAATGGATTGTCAGGTAAGTAATGATTATTTGAGAGCATTTTTTTTCATGCTTGCAAGTCTTTTGCAATATAACTTAAGCTTTATATTTTGGTCAATGTGCTTAACTTTTCCACAATGAATTGGACAGATGCCAGTGAAGGATGGGTTTGAGGCAACAAGGGAGATAAGAGAGATGGAGAAACACTATGGTCTTCACATTTCTATCATTGCATTATCTGCTGAAATTGACAAGCTGACCACTGAGACTGGAATGGATTTCCACATTACCAAACCTATCAAGAAAGAGCATTTACTCAAAGCTATTGCGTACATAGAAAATAGTGACATAATGTAA
Protein sequence

>MS.gene07278.t1

MNTGLSMALLRPSSFMILLAYGALIVLASLTPCWYLMVTHIEKSVNLHSANIVSQLQSEIEYSAELLQPMKSSSTNLSTLLSSTLNSTNVTFSDVHTKVAPLLFQALKTIPHLTQISYIGMEGLFFTHYNDGDQVLAMYSNSSSGGASNKTIYYIQPVNHDTGMVFGEAIISNNTINIDASWINGTNNISHEFASLGTKLNNVSDLLFMNSARINRIGGVSLGFSTKAITDYITRIVDRQGTKSYLATKDGKVIVKGIQNIRLMIFNDSVSIQAVNGNGDLIRNEGAVSCKEQAVGSSLNIHDTQYLIHCYPIDIMGIESVHVLAVPQNGSLIFNPSHKEKGLTLLIVMMVMIFIAILSFLFLNVGVTKREMHLCASLIQQKEATEQAERKNTNKSLAFATASHDLRAYLAGLIGLIEMSSKLVVTNSKLDTNLKPSSELETNLKQMDNCAQDLLGLLNSILDTSKIEAGKMQLEEEEFDLSSLLEDVVDLYHPMAMKKGVEVVLDPCNGSVIKHSRVKGDRRKLKQVLCNLLSNAVKFTDEGHITVRAWTQKAKLQKSKTNHKSVMKHLSWLFSKKDKECEDIEAVNLAQQDPCLMDFVFEVDDTGKGIPKENHKSVFENYVQVKENSVGQVGTGLGLGIVQSLVRLMHGDIGIVDKEVGKRGTCFKFNVLLTLCENETVNYEYGSTSGDKNQTLEKKLTIRTASSGSSICSLSPKLHVSPSQRPEPSHVILYITDEERRRTSQLFIESLGIKVKVVKSRNHLIHTLKKIKKEKGDDISDQSSPESSEMSSRCTSYNSSCSRRVPFKAMDHGNEYLSSMFKKKNNGAAPSFVLIIIDANAGPFSKLCKIVSNFKKDLLNPSKVVWLEKPFESSVDYQAIDQDDIVISKPFHGSRLFQVIRLLPEFGGNWISNSSKPRNEPRSQVPSNDESVCLSVEQCWKGTQKSYVNLGRKGSVHQGEIEESGESSNPKPLSGKNFLVVDDSPMLRKICMATLRSLGVTTIDQCENGEEAVRTVQEGLTKDFTNPPYDYILMDCQMPVKDGFEATREIREMEKHYGLHISIIALSAEIDKLTTETGMDFHITKPIKKEHLLKAIAYIENSDIM