Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072949.t1 | XP_003603464.1 | 95.8 | 383 | 14 | 1 | 1 | 381 | 34 | 416 | 5.30E-200 | 706.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072949.t1 | Q84MB2 | 38.9 | 342 | 129 | 11 | 42 | 376 | 91 | 359 | 1.2e-43 | 178.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072949.t1 | G7JBP9 | 95.8 | 383 | 14 | 1 | 1 | 381 | 34 | 416 | 3.8e-200 | 706.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene072949.t1 | TF | Tify |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072949.t1 | MTR_3g107950 | 95.822 | 383 | 14 | 1 | 1 | 381 | 34 | 416 | 0.0 | 738 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072949.t1 | AT4G32570 | 38.281 | 384 | 156 | 12 | 1 | 376 | 49 | 359 | 6.82e-49 | 169 |
| MS.gene072949.t1 | AT4G32570 | 39.298 | 285 | 103 | 6 | 1 | 283 | 49 | 265 | 1.78e-47 | 165 |
Find 123 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATTCTGATTCCTCATTTA+TGG | 0.101310 | 3.1:-85554771 | MS.gene072949:CDS |
| CTAAGATTGATGCGAATAAA+TGG | 0.197424 | 3.1:-85554448 | MS.gene072949:CDS |
| ATCAGTAGCAGCGGTGTTTA+TGG | 0.205391 | 3.1:+85554235 | None:intergenic |
| TCCACCTCCGAAACCGTTTC+TGG | 0.230412 | 3.1:-85555468 | MS.gene072949:intron |
| ATTATATTAGTTAGAGGTTT+TGG | 0.247280 | 3.1:+85554176 | None:intergenic |
| AATTCTGATTCCTCATTTAT+GGG | 0.297898 | 3.1:-85554770 | MS.gene072949:CDS |
| GTTTATGGAACTTAAAATTC+CGG | 0.306770 | 3.1:+85554250 | None:intergenic |
| ACCAGCTTTGCAGTAGATTT+CGG | 0.332699 | 3.1:+85552058 | None:intergenic |
| CATAGTGGAGAAAATGAAAC+AGG | 0.343306 | 3.1:-85552019 | MS.gene072949:CDS |
| TTCCACCGACGTTAGGTTAC+CGG | 0.369691 | 3.1:-85555538 | MS.gene072949:CDS |
| GATTCTATTATATTAGTTAG+AGG | 0.379814 | 3.1:+85554170 | None:intergenic |
| GACCATTTGAAAGGCATCTC+TGG | 0.380703 | 3.1:+85554742 | None:intergenic |
| TCTCTCCTCCAGACGCATTT+CGG | 0.381595 | 3.1:+85554564 | None:intergenic |
| GATGTTATAATGGCTTTGGC+TGG | 0.382975 | 3.1:-85552115 | MS.gene072949:CDS |
| TTTATGGAACTTAAAATTCC+GGG | 0.391734 | 3.1:+85554251 | None:intergenic |
| CTCGAGGGAGTTCCATTCTA+TGG | 0.400380 | 3.1:-85554854 | MS.gene072949:CDS |
| AACTAACTTCAAACAAGCTT+AGG | 0.400478 | 3.1:-85554346 | MS.gene072949:CDS |
| TGCTAAAGATACTAGAAATC+CGG | 0.405348 | 3.1:-85551387 | MS.gene072949:CDS |
| GGAGAAAGGGCCACGAGCAC+CGG | 0.406027 | 3.1:+85555491 | None:intergenic |
| GAGGCTGATGCTGATGCTTC+CGG | 0.410605 | 3.1:+85555519 | None:intergenic |
| TAAGCTTGTTTGAAGTTAGT+TGG | 0.412879 | 3.1:+85554348 | None:intergenic |
| CATGGGAAGTTGTCTGCTAC+TGG | 0.416162 | 3.1:-85551962 | MS.gene072949:CDS |
| GCCACGAGCACCGGCGGAGG+AGG | 0.420220 | 3.1:+85555500 | None:intergenic |
| GTGCTTACCAGAAACGGTTT+CGG | 0.424015 | 3.1:+85555461 | None:intergenic |
| CGCGGAGGATGCTGCATGGA+AGG | 0.427118 | 3.1:+85554398 | None:intergenic |
| ATCTGGCGGCTGGCAGGTGT+TGG | 0.436258 | 3.1:+85554003 | None:intergenic |
| CTGGGTCAAATGGTGGATCT+TGG | 0.437897 | 3.1:-85552096 | MS.gene072949:CDS |
| GGCAGATGTTATAATGGCTT+TGG | 0.438099 | 3.1:-85552119 | MS.gene072949:CDS |
| TGATGATGTCCACCAACATA+AGG | 0.439728 | 3.1:-85553947 | MS.gene072949:intron |
| GAAGTTAGTTGGTGTGCAAA+AGG | 0.439875 | 3.1:+85554359 | None:intergenic |
| CAGGTCCTCCGAAATGCGTC+TGG | 0.445569 | 3.1:-85554572 | MS.gene072949:CDS |
| TCACTTCTTGGGCCATAGAA+TGG | 0.448253 | 3.1:+85554842 | None:intergenic |
| TCAAAACTCACATTTGATGA+AGG | 0.451036 | 3.1:-85554708 | MS.gene072949:intron |
| CGCATCAATCTTAGTGTTGG+CGG | 0.457246 | 3.1:+85554457 | None:intergenic |
| GGAGTAGATACACGGTCAAC+AGG | 0.460556 | 3.1:+85551917 | None:intergenic |
| ATAGTCATCTGGCGGCTGGC+AGG | 0.466446 | 3.1:+85553997 | None:intergenic |
| TATCAATTTGGTAGAAAAGC+AGG | 0.466579 | 3.1:-85554888 | MS.gene072949:intron |
| ACCAGAAACGGTTTCGGAGG+TGG | 0.466600 | 3.1:+85555467 | None:intergenic |
| GCATTCCCACAAGAGCTTCA+TGG | 0.467087 | 3.1:-85551980 | MS.gene072949:CDS |
| TATGCAGGCAGATGTTATAA+TGG | 0.469314 | 3.1:-85552125 | MS.gene072949:intron |
| CATTCCCACAAGAGCTTCAT+GGG | 0.469855 | 3.1:-85551979 | MS.gene072949:CDS |
| CTCCAGAGATGCCTTTCAAA+TGG | 0.470651 | 3.1:-85554744 | MS.gene072949:CDS |
| AAGCTTAGGGATACCATTGC+CGG | 0.471593 | 3.1:-85554332 | MS.gene072949:CDS |
| TAAGATTGATGCGAATAAAT+GGG | 0.473687 | 3.1:-85554447 | MS.gene072949:CDS |
| ACCGAAATCTACTGCAAAGC+TGG | 0.475875 | 3.1:-85552059 | MS.gene072949:CDS |
| GTTTCGGAGGTGGAGGAGAA+AGG | 0.476240 | 3.1:+85555477 | None:intergenic |
| GACCGTGTATCTACTCCAAC+CGG | 0.477444 | 3.1:-85551911 | MS.gene072949:intron |
| AGGGCCACGAGCACCGGCGG+AGG | 0.478100 | 3.1:+85555497 | None:intergenic |
| ATGGCTTTGGCTGGGTCAAA+TGG | 0.478398 | 3.1:-85552106 | MS.gene072949:CDS |
| CTGATACTTCCACCGACGTT+AGG | 0.478726 | 3.1:-85555545 | MS.gene072949:CDS |
| CTGGAGGAGAGAGATCTAGA+AGG | 0.484867 | 3.1:-85554553 | MS.gene072949:CDS |
| GCCTCCTCCGCCGGTGCTCG+TGG | 0.487582 | 3.1:-85555501 | MS.gene072949:CDS |
| GGATCTGCTGCTTGAACCGC+CGG | 0.490647 | 3.1:+85551368 | None:intergenic |
| GCTGATGAAGGATCTAGAAC+TGG | 0.491143 | 3.1:-85554284 | MS.gene072949:CDS |
| AACTTCCCATGAAGCTCTTG+TGG | 0.491396 | 3.1:+85551974 | None:intergenic |
| CTCCATAAAAGATAGTCATC+TGG | 0.496051 | 3.1:+85553986 | None:intergenic |
| ACTAACTTCAAACAAGCTTA+GGG | 0.496585 | 3.1:-85554345 | MS.gene072949:CDS |
| TTTCGGAGGTGGAGGAGAAA+GGG | 0.497327 | 3.1:+85555478 | None:intergenic |
| GAGATAAGTAACAGACTAGT+GGG | 0.497646 | 3.1:-85554806 | MS.gene072949:CDS |
| ACTTCCCATGAAGCTCTTGT+GGG | 0.498210 | 3.1:+85551975 | None:intergenic |
| TTAATAGTGCTTACCAGAAA+CGG | 0.500267 | 3.1:+85555455 | None:intergenic |
| TCAGCATCAGCCTCCTCCGC+CGG | 0.503745 | 3.1:-85555510 | MS.gene072949:CDS |
| ATTCGCATCAATCTTAGTGT+TGG | 0.504337 | 3.1:+85554454 | None:intergenic |
| GCAGGCTGAGAGATAAATGA+AGG | 0.506389 | 3.1:+85554308 | None:intergenic |
| AGTAACACTTCGCCGTCATT+AGG | 0.510294 | 3.1:+85554530 | None:intergenic |
| GAAAGGGCCACGAGCACCGG+CGG | 0.511791 | 3.1:+85555494 | None:intergenic |
| GGATCTAGAACTGGAATCAA+AGG | 0.514477 | 3.1:-85554275 | MS.gene072949:CDS |
| AATGACGGCGAAGTGTTACT+TGG | 0.515528 | 3.1:-85554527 | MS.gene072949:CDS |
| TCTCAGCCTGCCGCTGATGA+AGG | 0.519106 | 3.1:-85554296 | MS.gene072949:CDS |
| GCATCAATCTTAGTGTTGGC+GGG | 0.522950 | 3.1:+85554458 | None:intergenic |
| CTAGATCCTTCATCAGCGGC+AGG | 0.525101 | 3.1:+85554290 | None:intergenic |
| CGATCTATTCTCATGAATGC+TGG | 0.527762 | 3.1:-85554422 | MS.gene072949:CDS |
| GGCAGTTCTAGCCGTGCCGT+TGG | 0.541164 | 3.1:-85551941 | MS.gene072949:CDS |
| ATGTTATAATGGCTTTGGCT+GGG | 0.543215 | 3.1:-85552114 | MS.gene072949:CDS |
| AATATCTGAGAACTAGAAGA+TGG | 0.544323 | 3.1:+85554488 | None:intergenic |
| AAAGATAGTCATCTGGCGGC+TGG | 0.544851 | 3.1:+85553993 | None:intergenic |
| GCATTGAACAGCAGTCAACA+TGG | 0.551557 | 3.1:-85554027 | MS.gene072949:intron |
| CTGAGAGATAAATGAAGGGC+CGG | 0.554107 | 3.1:+85554313 | None:intergenic |
| GATAAATGAAGGGCCGGCAA+TGG | 0.555598 | 3.1:+85554319 | None:intergenic |
| ATTTCATCTGTGGTGTTGCT+CGG | 0.555835 | 3.1:-85554209 | MS.gene072949:CDS |
| GCGGAGGATGCTGCATGGAA+GGG | 0.560490 | 3.1:+85554399 | None:intergenic |
| AGAACTGGAATCAAAGGCCC+CGG | 0.567203 | 3.1:-85554269 | MS.gene072949:CDS |
| AGAAACGGTTTCGGAGGTGG+AGG | 0.574883 | 3.1:+85555470 | None:intergenic |
| AATGATAGTAACTTGCATAG+TGG | 0.579416 | 3.1:-85552034 | MS.gene072949:CDS |
| TCTGGAGGAACCCATAAATG+AGG | 0.581916 | 3.1:+85554760 | None:intergenic |
| TCCACGCGGAGGATGCTGCA+TGG | 0.586678 | 3.1:+85554394 | None:intergenic |
| GAGGTCAGACCTTATGTTGG+TGG | 0.592305 | 3.1:+85553938 | None:intergenic |
| GCTTTGGCTGGGTCAAATGG+TGG | 0.593671 | 3.1:-85552103 | MS.gene072949:CDS |
| GGTCAACAGGTCCAACGGCA+CGG | 0.599017 | 3.1:+85551930 | None:intergenic |
| GGAATCAGGGACCATTTGAA+AGG | 0.601761 | 3.1:+85554733 | None:intergenic |
| TACACGGTCAACAGGTCCAA+CGG | 0.603243 | 3.1:+85551925 | None:intergenic |
| CTCCTCCAGACGCATTTCGG+AGG | 0.605747 | 3.1:+85554567 | None:intergenic |
| CCGGTTGTAGGGGTACATCA+AGG | 0.607519 | 3.1:-85551419 | MS.gene072949:intron |
| AACGTCGGTGGAAGTATCAG+TGG | 0.609086 | 3.1:+85555548 | None:intergenic |
| GTCCTCCGAAATGCGTCTGG+AGG | 0.623376 | 3.1:-85554569 | MS.gene072949:CDS |
| AGATCTAGAAGGCCTAATGA+CGG | 0.625025 | 3.1:-85554542 | MS.gene072949:CDS |
| TGAGATAAGTAACAGACTAG+TGG | 0.631355 | 3.1:-85554807 | MS.gene072949:CDS |
| CTTACCAGAAACGGTTTCGG+AGG | 0.633124 | 3.1:+85555464 | None:intergenic |
| ATGCAGCATCCTCCGCGTGG+AGG | 0.635328 | 3.1:-85554392 | MS.gene072949:CDS |
| TACTGATAAAATTTCATCTG+TGG | 0.635799 | 3.1:-85554219 | MS.gene072949:CDS |
| CATTTGAAAGGCATCTCTGG+AGG | 0.646720 | 3.1:+85554745 | None:intergenic |
| CAGGTATCGAATCATCTCGA+GGG | 0.650968 | 3.1:-85554869 | MS.gene072949:CDS |
| TACGAGGTCAGACCTTATGT+TGG | 0.651133 | 3.1:+85553935 | None:intergenic |
| AGTTCTAGATCCTTCATCAG+CGG | 0.651396 | 3.1:+85554286 | None:intergenic |
| CATTGAACAGCAGTCAACAT+GGG | 0.652838 | 3.1:-85554026 | MS.gene072949:intron |
| ACGTCGGTGGAAGTATCAGT+GGG | 0.655076 | 3.1:+85555549 | None:intergenic |
| GCAGGTATCGAATCATCTCG+AGG | 0.661921 | 3.1:-85554870 | MS.gene072949:CDS |
| TTATGGAACTTAAAATTCCG+GGG | 0.662736 | 3.1:+85554252 | None:intergenic |
| TCAATCTTAGTGTTGGCGGG+AGG | 0.664926 | 3.1:+85554461 | None:intergenic |
| CATAAAAGATAGTCATCTGG+CGG | 0.666315 | 3.1:+85553989 | None:intergenic |
| TTCCGGTAACCTAACGTCGG+TGG | 0.673051 | 3.1:+85555536 | None:intergenic |
| TCCATGCAGCATCCTCCGCG+TGG | 0.673722 | 3.1:-85554395 | MS.gene072949:CDS |
| CAGGCTGAGAGATAAATGAA+GGG | 0.676282 | 3.1:+85554309 | None:intergenic |
| GTCAACTGTCCTCCACGCGG+AGG | 0.679890 | 3.1:+85554383 | None:intergenic |
| TCATCTGTGGTGTTGCTCGG+TGG | 0.681028 | 3.1:-85554206 | MS.gene072949:CDS |
| AACAGGGTTAGTGAGTAATG+TGG | 0.689431 | 3.1:-85552002 | MS.gene072949:CDS |
| TACCGGTTGGAGTAGATACA+CGG | 0.691538 | 3.1:+85551909 | None:intergenic |
| TGCTTCCGGTAACCTAACGT+CGG | 0.703784 | 3.1:+85555533 | None:intergenic |
| ATAAGATAGATTTACCTTGG+GGG | 0.712059 | 3.1:+85554140 | None:intergenic |
| TAAAGATACTAGAAATCCGG+CGG | 0.716386 | 3.1:-85551384 | MS.gene072949:CDS |
| ATAGTGGAGAAAATGAAACA+GGG | 0.722474 | 3.1:-85552018 | MS.gene072949:CDS |
| AGATAAGTAACAGACTAGTG+GGG | 0.741446 | 3.1:-85554805 | MS.gene072949:CDS |
| GGAGTCAACTGTCCTCCACG+CGG | 0.758189 | 3.1:+85554380 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCTATGAATTTAAAAAATT+CGG | - | chr3.1:85553043-85553062 | MS.gene072949:intron | 10.0% |
| !!! | AAATGATTTTAATGAAAAAT+TGG | + | chr3.1:85554553-85554572 | None:intergenic | 10.0% |
| !!! | ATATAATGATATGAATTTTT+AGG | - | chr3.1:85551850-85551869 | MS.gene072949:intron | 10.0% |
| !!! | ATTTTTCATTAAAATCATTT+AGG | - | chr3.1:85554553-85554572 | MS.gene072949:CDS | 10.0% |
| !!! | CTTTTTCTATTAAATATTAT+AGG | + | chr3.1:85553250-85553269 | None:intergenic | 10.0% |
| !!! | TTTTTCATTAAAATCATTTA+GGG | - | chr3.1:85554554-85554573 | MS.gene072949:CDS | 10.0% |
| !! | AAAGATCAAAGAAAATAAAT+AGG | + | chr3.1:85554602-85554621 | None:intergenic | 15.0% |
| !! | AATAAAAAAAATCAAACAAG+GGG | + | chr3.1:85551498-85551517 | None:intergenic | 15.0% |
| !! | ATACATGTTAAAAAATCTAT+TGG | + | chr3.1:85554168-85554187 | None:intergenic | 15.0% |
| !! | CAATAAAAAAAATCAAACAA+GGG | + | chr3.1:85551499-85551518 | None:intergenic | 15.0% |
| !! | TACATGTTAAAAAATCTATT+GGG | + | chr3.1:85554167-85554186 | None:intergenic | 15.0% |
| !! | TCAATAAAAAAAATCAAACA+AGG | + | chr3.1:85551500-85551519 | None:intergenic | 15.0% |
| !!! | AAATTCTCTAAAAAAATGTT+TGG | - | chr3.1:85553544-85553563 | MS.gene072949:intron | 15.0% |
| !!! | CTGTTTAATTTTTTATTATC+CGG | - | chr3.1:85555457-85555476 | MS.gene072949:intron | 15.0% |
| !!! | TTTTTATTTTTTTGTGTCTA+TGG | - | chr3.1:85551598-85551617 | MS.gene072949:intron | 15.0% |
| !!! | TTTTTTATACTGAATGTATT+TGG | - | chr3.1:85553383-85553402 | MS.gene072949:intron | 15.0% |
| !! | AAATACTTATACAAATGACT+AGG | + | chr3.1:85553981-85554000 | None:intergenic | 20.0% |
| !! | AGTGAAAATAAATAGAATCA+AGG | + | chr3.1:85552801-85552820 | None:intergenic | 20.0% |
| !! | ATAAAAAAAATCAAACAAGG+GGG | + | chr3.1:85551497-85551516 | None:intergenic | 20.0% |
| !! | ATATAAGATAGATTTACCTT+GGG | + | chr3.1:85552760-85552779 | None:intergenic | 20.0% |
| !! | GATTCTATTATATTAGTTAG+AGG | + | chr3.1:85552728-85552747 | None:intergenic | 20.0% |
| !! | TAGACTTGATGTATAAATAT+TGG | - | chr3.1:85554399-85554418 | MS.gene072949:CDS | 20.0% |
| !! | TAGTCATTTGTATAAGTATT+TGG | - | chr3.1:85553980-85553999 | MS.gene072949:CDS | 20.0% |
| !! | TATATAAGATAGATTTACCT+TGG | + | chr3.1:85552761-85552780 | None:intergenic | 20.0% |
| !! | TTCTAAATTCATCAGAATAT+TGG | - | chr3.1:85555315-85555334 | MS.gene072949:intron | 20.0% |
| !!! | AAAGTTTTGTGTTCAAAAAA+TGG | + | chr3.1:85551798-85551817 | None:intergenic | 20.0% |
| !!! | ATTATATTAGTTAGAGGTTT+TGG | + | chr3.1:85552722-85552741 | None:intergenic | 20.0% |
| !!! | CTTTATTTTGATTTGTAGTA+TGG | - | chr3.1:85551694-85551713 | MS.gene072949:intron | 20.0% |
| !!! | GTTTCTATGTTTTCTTTAAA+TGG | - | chr3.1:85551965-85551984 | MS.gene072949:CDS | 20.0% |
| !!! | TTCTTCATCTTATTTTTTCT+AGG | - | chr3.1:85553467-85553486 | MS.gene072949:intron | 20.0% |
| ! | AATACATTTGCTTAAGCTTT+GGG | - | chr3.1:85553287-85553306 | MS.gene072949:intron | 25.0% |
| ! | AATATTCTGATTTCTAAGTG+GGG | - | chr3.1:85554211-85554230 | MS.gene072949:CDS | 25.0% |
| ! | AATCAAGAAAATATTCGAGT+TGG | + | chr3.1:85555371-85555390 | None:intergenic | 25.0% |
| ! | AATTCTGATTCCTCATTTAT+GGG | - | chr3.1:85552125-85552144 | MS.gene072949:intron | 25.0% |
| ! | AGCTTAAGCAAATGTATTAT+TGG | + | chr3.1:85553285-85553304 | None:intergenic | 25.0% |
| ! | ATAAGCTGAAAACAACTTAT+AGG | + | chr3.1:85554034-85554053 | None:intergenic | 25.0% |
| ! | CAGTTAAATTTAAACTCATC+AGG | - | chr3.1:85553112-85553131 | MS.gene072949:intron | 25.0% |
| ! | CATAGATACAAACTAATTTC+AGG | + | chr3.1:85553030-85553049 | None:intergenic | 25.0% |
| ! | CTCACTTTAAATTATTTCCA+TGG | + | chr3.1:85551742-85551761 | None:intergenic | 25.0% |
| ! | GAATATTCTGATTTCTAAGT+GGG | - | chr3.1:85554210-85554229 | MS.gene072949:CDS | 25.0% |
| ! | GACTTAAAAATTAACAGAGT+TGG | - | chr3.1:85553705-85553724 | MS.gene072949:intron | 25.0% |
| ! | GATTTGATTATTTGTTTCCA+TGG | - | chr3.1:85551722-85551741 | MS.gene072949:intron | 25.0% |
| ! | GTATTATCATACCTTCAAAT+TGG | - | chr3.1:85555059-85555078 | MS.gene072949:intron | 25.0% |
| ! | GTTTATGGAACTTAAAATTC+CGG | + | chr3.1:85552648-85552667 | None:intergenic | 25.0% |
| ! | TAAGATTGATGCGAATAAAT+GGG | - | chr3.1:85552448-85552467 | MS.gene072949:intron | 25.0% |
| ! | TAATACATTTGCTTAAGCTT+TGG | - | chr3.1:85553286-85553305 | MS.gene072949:intron | 25.0% |
| ! | TAATTCTGATTCCTCATTTA+TGG | - | chr3.1:85552124-85552143 | MS.gene072949:intron | 25.0% |
| ! | TACTGATAAAATTTCATCTG+TGG | - | chr3.1:85552676-85552695 | MS.gene072949:intron | 25.0% |
| ! | TAGTATATAAAGTCAGCTTA+GGG | - | chr3.1:85553440-85553459 | MS.gene072949:intron | 25.0% |
| ! | TATAAGATAGATTTACCTTG+GGG | + | chr3.1:85552759-85552778 | None:intergenic | 25.0% |
| ! | TATTTGGATGATAGTTTCTA+TGG | - | chr3.1:85553399-85553418 | MS.gene072949:intron | 25.0% |
| ! | TTACTGCATTTAGTGAAATT+AGG | - | chr3.1:85553004-85553023 | MS.gene072949:intron | 25.0% |
| ! | TTTATGGAACTTAAAATTCC+GGG | + | chr3.1:85552647-85552666 | None:intergenic | 25.0% |
| !! | CAAATTTATGGTCATGATTT+TGG | - | chr3.1:85551670-85551689 | MS.gene072949:intron | 25.0% |
| !! | CATTGCATTTAAGTTACATT+TGG | - | chr3.1:85553928-85553947 | MS.gene072949:intron | 25.0% |
| !! | CTTTTCTACCAAATTGATAA+GGG | + | chr3.1:85552006-85552025 | None:intergenic | 25.0% |
| !! | TGATTGTTCAAAGCTAATTT+TGG | + | chr3.1:85555208-85555227 | None:intergenic | 25.0% |
| !! | TTGTCTGATTTTTCTTTTCT+TGG | - | chr3.1:85551887-85551906 | MS.gene072949:intron | 25.0% |
| !! | TTTTCTACCAAATTGATAAG+GGG | + | chr3.1:85552005-85552024 | None:intergenic | 25.0% |
| !! | TTTTTAATCAAAATCCAGTG+AGG | - | chr3.1:85554447-85554466 | MS.gene072949:CDS | 25.0% |
| !!! | ATTTTTTATTATCCGGTTGT+AGG | - | chr3.1:85555464-85555483 | MS.gene072949:intron | 25.0% |
| !!! | CAAAAGTGTTTTTCTTCTTT+TGG | + | chr3.1:85552260-85552279 | None:intergenic | 25.0% |
| !!! | TCTTTCTCGTTTTATTGAAA+TGG | + | chr3.1:85554282-85554301 | None:intergenic | 25.0% |
| !!! | TTTTTTATTATCCGGTTGTA+GGG | - | chr3.1:85555465-85555484 | MS.gene072949:intron | 25.0% |
| !!! | TTTTTTTGTGTCTATGGATT+TGG | - | chr3.1:85551604-85551623 | MS.gene072949:intron | 25.0% |
| AACTAACTTCAAACAAGCTT+AGG | - | chr3.1:85552549-85552568 | MS.gene072949:intron | 30.0% | |
| AAGAAAAGGATGACACAAAA+AGG | + | chr3.1:85555277-85555296 | None:intergenic | 30.0% | |
| AATATCTGAGAACTAGAAGA+TGG | + | chr3.1:85552410-85552429 | None:intergenic | 30.0% | |
| AATGATCCTTAAATCAACCA+CGG | + | chr3.1:85553081-85553100 | None:intergenic | 30.0% | |
| ACTAACTTCAAACAAGCTTA+GGG | - | chr3.1:85552550-85552569 | MS.gene072949:intron | 30.0% | |
| ACTACTATAAGACTAGAGTT+TGG | + | chr3.1:85554127-85554146 | None:intergenic | 30.0% | |
| AGAAGACGAGAAATTTCATA+TGG | + | chr3.1:85555410-85555429 | None:intergenic | 30.0% | |
| ATAAGATAGATTTACCTTGG+GGG | + | chr3.1:85552758-85552777 | None:intergenic | 30.0% | |
| CGAATCCATCAAGAAATTTA+AGG | - | chr3.1:85553680-85553699 | MS.gene072949:intron | 30.0% | |
| CGACTATCAATACCATATTT+CGG | + | chr3.1:85553144-85553163 | None:intergenic | 30.0% | |
| CTAAGATTGATGCGAATAAA+TGG | - | chr3.1:85552447-85552466 | MS.gene072949:intron | 30.0% | |
| CTACTATAAGACTAGAGTTT+GGG | + | chr3.1:85554126-85554145 | None:intergenic | 30.0% | |
| CTAGTATATAAAGTCAGCTT+AGG | - | chr3.1:85553439-85553458 | MS.gene072949:intron | 30.0% | |
| GCATACTACATAGTTTGATT+TGG | - | chr3.1:85555017-85555036 | MS.gene072949:intron | 30.0% | |
| GGAATATTCTGATTTCTAAG+TGG | - | chr3.1:85554209-85554228 | MS.gene072949:CDS | 30.0% | |
| TATCAATTTGGTAGAAAAGC+AGG | - | chr3.1:85552007-85552026 | MS.gene072949:CDS | 30.0% | |
| TCAAAACTCACATTTGATGA+AGG | - | chr3.1:85552187-85552206 | MS.gene072949:intron | 30.0% | |
| TCTGATGAATTTAGAAAGCA+AGG | + | chr3.1:85555311-85555330 | None:intergenic | 30.0% | |
| TCTTGGTTTCTTACTTATTC+TGG | - | chr3.1:85551904-85551923 | MS.gene072949:intron | 30.0% | |
| TGAAAACTTCCAAATTTCAG+CGG | + | chr3.1:85553524-85553543 | None:intergenic | 30.0% | |
| TGCTAAAGATACTAGAAATC+CGG | - | chr3.1:85555508-85555527 | MS.gene072949:CDS | 30.0% | |
| TGGAAAGTAAAGAACTTTAG+TGG | + | chr3.1:85551535-85551554 | None:intergenic | 30.0% | |
| TTAATAGTGCTTACCAGAAA+CGG | + | chr3.1:85551443-85551462 | None:intergenic | 30.0% | |
| TTATGGAACTTAAAATTCCG+GGG | + | chr3.1:85552646-85552665 | None:intergenic | 30.0% | |
| ! | AAACAGTCTTTTTCTCTTAC+TGG | - | chr3.1:85553333-85553352 | MS.gene072949:intron | 30.0% |
| ! | AATGATAGTAACTTGCATAG+TGG | - | chr3.1:85554861-85554880 | MS.gene072949:CDS | 30.0% |
| ! | ATAGTGGAGAAAATGAAACA+GGG | - | chr3.1:85554877-85554896 | MS.gene072949:CDS | 30.0% |
| ! | GCTTTTCTACCAAATTGATA+AGG | + | chr3.1:85552007-85552026 | None:intergenic | 30.0% |
| ! | TAAGCTTGTTTGAAGTTAGT+TGG | + | chr3.1:85552550-85552569 | None:intergenic | 30.0% |
| ! | TGAAATTTTATCAGTAGCAG+CGG | + | chr3.1:85552672-85552691 | None:intergenic | 30.0% |
| ! | TGTTGCTTGATATTGCTTAT+TGG | - | chr3.1:85554334-85554353 | MS.gene072949:CDS | 30.0% |
| ! | TGTTTTTCCCCTTATCAATT+TGG | - | chr3.1:85551995-85552014 | MS.gene072949:CDS | 30.0% |
| ! | TTAATCGACGTTATGCATTT+TGG | - | chr3.1:85552846-85552865 | MS.gene072949:intron | 30.0% |
| ! | TTTTTATTATCCGGTTGTAG+GGG | - | chr3.1:85555466-85555485 | MS.gene072949:intron | 30.0% |
| !! | AGAAAATATTCGAGTTGGTT+CGG | + | chr3.1:85555366-85555385 | None:intergenic | 30.0% |
| !! | CGAAATATGGTATTGATAGT+CGG | - | chr3.1:85553142-85553161 | MS.gene072949:intron | 30.0% |
| !! | CTTTTGGCTATTGAATATGT+TGG | + | chr3.1:85552244-85552263 | None:intergenic | 30.0% |
| !! | TAGGGCAAACTCATTTTTAT+AGG | - | chr3.1:85554572-85554591 | MS.gene072949:CDS | 30.0% |
| !! | TCTTTGTCTAGTTCTTGTAA+TGG | - | chr3.1:85554621-85554640 | MS.gene072949:intron | 30.0% |
| !! | TTGGTTTGTTTCAAGTTAGT+TGG | - | chr3.1:85551623-85551642 | MS.gene072949:intron | 30.0% |
| !!! | CATCAAATGTGAGTTTTGAA+AGG | + | chr3.1:85552186-85552205 | None:intergenic | 30.0% |
| AAAACTTCCAAATTTCAGCG+GGG | + | chr3.1:85553522-85553541 | None:intergenic | 35.0% | |
| AAGGATGACACAAAAAGGAT+CGG | + | chr3.1:85555272-85555291 | None:intergenic | 35.0% | |
| ACAATTTAACTGATCCTCAC+TGG | + | chr3.1:85554464-85554483 | None:intergenic | 35.0% | |
| ACCATAAATTTGCATACCAG+GGG | + | chr3.1:85551662-85551681 | None:intergenic | 35.0% | |
| AGATAAGTAACAGACTAGTG+GGG | - | chr3.1:85552090-85552109 | MS.gene072949:CDS | 35.0% | |
| AGGCATGTAAGGTAAAGAAA+AGG | + | chr3.1:85555291-85555310 | None:intergenic | 35.0% | |
| ATGGATCAATCAATGCCTTT+GGG | - | chr3.1:85554515-85554534 | MS.gene072949:CDS | 35.0% | |
| ATTCGCATCAATCTTAGTGT+TGG | + | chr3.1:85552444-85552463 | None:intergenic | 35.0% | |
| CAAACTATGTAGTATGCTTG+AGG | + | chr3.1:85555014-85555033 | None:intergenic | 35.0% | |
| CAACTGATGATCAACACTTT+CGG | + | chr3.1:85554362-85554381 | None:intergenic | 35.0% | |
| CATAAAAGATAGTCATCTGG+CGG | + | chr3.1:85552909-85552928 | None:intergenic | 35.0% | |
| CATGTGAATGTTTGTGCATT+GGG | - | chr3.1:85551825-85551844 | MS.gene072949:intron | 35.0% | |
| CTCCATAAAAGATAGTCATC+TGG | + | chr3.1:85552912-85552931 | None:intergenic | 35.0% | |
| GAAAACTTCCAAATTTCAGC+GGG | + | chr3.1:85553523-85553542 | None:intergenic | 35.0% | |
| GACCATAAATTTGCATACCA+GGG | + | chr3.1:85551663-85551682 | None:intergenic | 35.0% | |
| GAGATAAGTAACAGACTAGT+GGG | - | chr3.1:85552089-85552108 | MS.gene072949:CDS | 35.0% | |
| GTCAGCCTTAAATTTCTTGA+TGG | + | chr3.1:85553688-85553707 | None:intergenic | 35.0% | |
| GTTGTCCGATCTCATATTAA+CGG | + | chr3.1:85555170-85555189 | None:intergenic | 35.0% | |
| TAAAGATACTAGAAATCCGG+CGG | - | chr3.1:85555511-85555530 | MS.gene072949:CDS | 35.0% | |
| TATGACACGTTAAGAATACG+AGG | + | chr3.1:85552979-85552998 | None:intergenic | 35.0% | |
| TATGCAGGCAGATGTTATAA+TGG | - | chr3.1:85554770-85554789 | MS.gene072949:CDS | 35.0% | |
| TCAAGTCTAACAGTAACACT+CGG | + | chr3.1:85554388-85554407 | None:intergenic | 35.0% | |
| TCATGTGAATGTTTGTGCAT+TGG | - | chr3.1:85551824-85551843 | MS.gene072949:intron | 35.0% | |
| TCTTCACATGTCATAACAGA+AGG | - | chr3.1:85554685-85554704 | MS.gene072949:intron | 35.0% | |
| TGACCATAAATTTGCATACC+AGG | + | chr3.1:85551664-85551683 | None:intergenic | 35.0% | |
| TGAGATAAGTAACAGACTAG+TGG | - | chr3.1:85552088-85552107 | MS.gene072949:CDS | 35.0% | |
| TGCAACCTATGTTGTATTGA+AGG | - | chr3.1:85553809-85553828 | MS.gene072949:intron | 35.0% | |
| TGCCAGAAAAATCACTTCTT+GGG | + | chr3.1:85552067-85552086 | None:intergenic | 35.0% | |
| TTCAATCACTGCCAATTTGA+AGG | + | chr3.1:85555073-85555092 | None:intergenic | 35.0% | |
| TTCACAGTTGAAGTGATTGA+TGG | + | chr3.1:85554255-85554274 | None:intergenic | 35.0% | |
| TTGCTCCTTCAATACAACAT+AGG | + | chr3.1:85553817-85553836 | None:intergenic | 35.0% | |
| TTGGCTATTGAATATGTTGG+AGG | + | chr3.1:85552241-85552260 | None:intergenic | 35.0% | |
| TTTAGAAAGCAAGGCATGTA+AGG | + | chr3.1:85555302-85555321 | None:intergenic | 35.0% | |
| ! | ACAGCAACATAAGTGTTGTA+CGG | + | chr3.1:85553177-85553196 | None:intergenic | 35.0% |
| ! | ATACTGCAGGCGATATTTTT+GGG | + | chr3.1:85555115-85555134 | None:intergenic | 35.0% |
| ! | CAGATGACTATCTTTTATGG+AGG | - | chr3.1:85552910-85552929 | MS.gene072949:intron | 35.0% |
| ! | CATAGTGGAGAAAATGAAAC+AGG | - | chr3.1:85554876-85554895 | MS.gene072949:CDS | 35.0% |
| ! | TATTTTCACTCCCTTTACGT+TGG | - | chr3.1:85552811-85552830 | MS.gene072949:intron | 35.0% |
| ! | TCCTAAATTCTGACTTGAGT+TGG | - | chr3.1:85554488-85554507 | MS.gene072949:CDS | 35.0% |
| ! | TGGTTTTTGATAAAGCCCAA+AGG | + | chr3.1:85554533-85554552 | None:intergenic | 35.0% |
| !! | ATGTTATAATGGCTTTGGCT+GGG | - | chr3.1:85554781-85554800 | MS.gene072949:CDS | 35.0% |
| !! | GAAAATATTCGAGTTGGTTC+GGG | + | chr3.1:85555365-85555384 | None:intergenic | 35.0% |
| !!! | CCATTTTTTCTTCTCTCAGT+GGG | - | chr3.1:85551552-85551571 | MS.gene072949:intron | 35.0% |
| !!! | GTGAGTTTTGAAAGGAATCA+GGG | + | chr3.1:85552178-85552197 | None:intergenic | 35.0% |
| !!! | TCCATTTTTTCTTCTCTCAG+TGG | - | chr3.1:85551551-85551570 | MS.gene072949:intron | 35.0% |
| !!! | TGTGAGTTTTGAAAGGAATC+AGG | + | chr3.1:85552179-85552198 | None:intergenic | 35.0% |
| ACAAAAAGGATCGGTGGAAT+TGG | + | chr3.1:85555263-85555282 | None:intergenic | 40.0% | |
| ACATGTATACCCAAGACAGT+AGG | - | chr3.1:85554180-85554199 | MS.gene072949:CDS | 40.0% | |
| ACCAGCTTTGCAGTAGATTT+CGG | + | chr3.1:85554840-85554859 | None:intergenic | 40.0% | |
| AGATCTAGAAGGCCTAATGA+CGG | - | chr3.1:85552353-85552372 | MS.gene072949:intron | 40.0% | |
| ATCAGGTTTCAGCCGAAATA+TGG | - | chr3.1:85553129-85553148 | MS.gene072949:intron | 40.0% | |
| CAGGCTGAGAGATAAATGAA+GGG | + | chr3.1:85552589-85552608 | None:intergenic | 40.0% | |
| CATGGATCAATCAATGCCTT+TGG | - | chr3.1:85554514-85554533 | MS.gene072949:CDS | 40.0% | |
| CATGTATACCCAAGACAGTA+GGG | - | chr3.1:85554181-85554200 | MS.gene072949:CDS | 40.0% | |
| CATTGAACAGCAGTCAACAT+GGG | - | chr3.1:85552869-85552888 | MS.gene072949:intron | 40.0% | |
| CCATAAATTTGCATACCAGG+GGG | + | chr3.1:85551661-85551680 | None:intergenic | 40.0% | |
| CCCACTGAGAGAAGAAAAAA+TGG | + | chr3.1:85551555-85551574 | None:intergenic | 40.0% | |
| CCTGAAATCTTAACCAAGCA+GGG | - | chr3.1:85553893-85553912 | MS.gene072949:intron | 40.0% | |
| CCTGCTTGGTTAAGATTTCA+GGG | + | chr3.1:85553895-85553914 | None:intergenic | 40.0% | |
| CGATCTATTCTCATGAATGC+TGG | - | chr3.1:85552473-85552492 | MS.gene072949:intron | 40.0% | |
| CTTAGCATCAGCAATGTGTT+TGG | + | chr3.1:85553574-85553593 | None:intergenic | 40.0% | |
| GCCAACTCAAGTCAGAATTT+AGG | + | chr3.1:85554492-85554511 | None:intergenic | 40.0% | |
| GCTGAATGAGAATCAAAGAG+GGG | + | chr3.1:85554104-85554123 | None:intergenic | 40.0% | |
| GGCAGATGTTATAATGGCTT+TGG | - | chr3.1:85554776-85554795 | MS.gene072949:CDS | 40.0% | |
| GGCTGAATGAGAATCAAAGA+GGG | + | chr3.1:85554105-85554124 | None:intergenic | 40.0% | |
| GTAGTATGCTTGAGGATTAC+CGG | + | chr3.1:85555006-85555025 | None:intergenic | 40.0% | |
| GTAGTCATTGCACAATATGG+TGG | - | chr3.1:85553214-85553233 | MS.gene072949:intron | 40.0% | |
| GTGCCAGAAAAATCACTTCT+TGG | + | chr3.1:85552068-85552087 | None:intergenic | 40.0% | |
| TATGTTTCCCCGCTGAAATT+TGG | - | chr3.1:85553512-85553531 | MS.gene072949:intron | 40.0% | |
| TGGGTAGTCATTGCACAATA+TGG | - | chr3.1:85553211-85553230 | MS.gene072949:intron | 40.0% | |
| TGTGCAATGACTACCCAAAT+AGG | + | chr3.1:85553208-85553227 | None:intergenic | 40.0% | |
| TTTACTGCGTCAAACTGTGT+GGG | + | chr3.1:85555138-85555157 | None:intergenic | 40.0% | |
| TTTGACGCAGTAAACGATCT+CGG | - | chr3.1:85555144-85555163 | MS.gene072949:intron | 40.0% | |
| ! | AACAGGGTTAGTGAGTAATG+TGG | - | chr3.1:85554893-85554912 | MS.gene072949:intron | 40.0% |
| ! | AAGAGACGCATAGTTTGTCT+TGG | - | chr3.1:85554654-85554673 | MS.gene072949:intron | 40.0% |
| ! | AGAGACGCATAGTTTGTCTT+GGG | - | chr3.1:85554655-85554674 | MS.gene072949:intron | 40.0% |
| ! | CGCCAGATGACTATCTTTTA+TGG | - | chr3.1:85552907-85552926 | MS.gene072949:intron | 40.0% |
| ! | GAAGTTAGTTGGTGTGCAAA+AGG | + | chr3.1:85552539-85552558 | None:intergenic | 40.0% |
| ! | GATACTGCAGGCGATATTTT+TGG | + | chr3.1:85555116-85555135 | None:intergenic | 40.0% |
| ! | GGATCTAGAACTGGAATCAA+AGG | - | chr3.1:85552620-85552639 | MS.gene072949:intron | 40.0% |
| ! | GTTCATCCGTGGTTGATTTA+AGG | - | chr3.1:85553072-85553091 | MS.gene072949:intron | 40.0% |
| ! | TCTCCTTTTGCCAACGTAAA+GGG | + | chr3.1:85552824-85552843 | None:intergenic | 40.0% |
| ! | TGATGATGTCCACCAACATA+AGG | - | chr3.1:85552948-85552967 | MS.gene072949:intron | 40.0% |
| ! | TTCTCCTTTTGCCAACGTAA+AGG | + | chr3.1:85552825-85552844 | None:intergenic | 40.0% |
| !! | AGTTCTAGATCCTTCATCAG+CGG | + | chr3.1:85552612-85552631 | None:intergenic | 40.0% |
| !! | ATTTCATCTGTGGTGTTGCT+CGG | - | chr3.1:85552686-85552705 | MS.gene072949:intron | 40.0% |
| !! | GATGTTATAATGGCTTTGGC+TGG | - | chr3.1:85554780-85554799 | MS.gene072949:CDS | 40.0% |
| !! | GCTGTTTCTACAGCCTATTT+GGG | - | chr3.1:85553192-85553211 | MS.gene072949:intron | 40.0% |
| !! | TACTGCAGGCGATATTTTTG+GGG | + | chr3.1:85555114-85555133 | None:intergenic | 40.0% |
| !! | TGCTGTTTCTACAGCCTATT+TGG | - | chr3.1:85553191-85553210 | MS.gene072949:intron | 40.0% |
| !!! | CTCAAGTCCTGTTTTTGTAC+AGG | - | chr3.1:85552304-85552323 | MS.gene072949:intron | 40.0% |
| AACTTCCCATGAAGCTCTTG+TGG | + | chr3.1:85554924-85554943 | None:intergenic | 45.0% | |
| AAGCTTAGGGATACCATTGC+CGG | - | chr3.1:85552563-85552582 | MS.gene072949:intron | 45.0% | |
| ACCGAAATCTACTGCAAAGC+TGG | - | chr3.1:85554836-85554855 | MS.gene072949:CDS | 45.0% | |
| ACTCCCTTTACGTTGGCAAA+AGG | - | chr3.1:85552818-85552837 | MS.gene072949:intron | 45.0% | |
| ACTTCCCATGAAGCTCTTGT+GGG | + | chr3.1:85554923-85554942 | None:intergenic | 45.0% | |
| AGAATCAAAGAGGGGTCTCA+GGG | + | chr3.1:85554096-85554115 | None:intergenic | 45.0% | |
| AGTAACACTTCGCCGTCATT+AGG | + | chr3.1:85552368-85552387 | None:intergenic | 45.0% | |
| ATCAGTAGCAGCGGTGTTTA+TGG | + | chr3.1:85552663-85552682 | None:intergenic | 45.0% | |
| CAACACATCTCGCATTTCGA+AGG | + | chr3.1:85554319-85554338 | None:intergenic | 45.0% | |
| CATTCCCACAAGAGCTTCAT+GGG | - | chr3.1:85554916-85554935 | MS.gene072949:intron | 45.0% | |
| CCCCCTGGTATGCAAATTTA+TGG | - | chr3.1:85551658-85551677 | MS.gene072949:intron | 45.0% | |
| CCCTGAAATCTTAACCAAGC+AGG | - | chr3.1:85553892-85553911 | MS.gene072949:intron | 45.0% | |
| CCCTGCTTGGTTAAGATTTC+AGG | + | chr3.1:85553896-85553915 | None:intergenic | 45.0% | |
| CCTATGCACTCTCAACGAAA+GGG | + | chr3.1:85553846-85553865 | None:intergenic | 45.0% | |
| CGAACAGACAGCTAATCAAC+TGG | + | chr3.1:85553772-85553791 | None:intergenic | 45.0% | |
| CTATGCACTCTCAACGAAAG+GGG | + | chr3.1:85553845-85553864 | None:intergenic | 45.0% | |
| CTCCAGAGATGCCTTTCAAA+TGG | - | chr3.1:85552151-85552170 | MS.gene072949:intron | 45.0% | |
| CTCGGCCGTTAATATGAGAT+CGG | - | chr3.1:85555162-85555181 | MS.gene072949:intron | 45.0% | |
| CTGAGAGATAAATGAAGGGC+CGG | + | chr3.1:85552585-85552604 | None:intergenic | 45.0% | |
| GATGACACAAAAAGGATCGG+TGG | + | chr3.1:85555269-85555288 | None:intergenic | 45.0% | |
| GCAGGCTGAGAGATAAATGA+AGG | + | chr3.1:85552590-85552609 | None:intergenic | 45.0% | |
| GCATTGAACAGCAGTCAACA+TGG | - | chr3.1:85552868-85552887 | MS.gene072949:intron | 45.0% | |
| GGAATCAGGGACCATTTGAA+AGG | + | chr3.1:85552165-85552184 | None:intergenic | 45.0% | |
| GGGCTGAATGAGAATCAAAG+AGG | + | chr3.1:85554106-85554125 | None:intergenic | 45.0% | |
| GTGCTTACCAGAAACGGTTT+CGG | + | chr3.1:85551437-85551456 | None:intergenic | 45.0% | |
| GTTTACTGCGTCAAACTGTG+TGG | + | chr3.1:85555139-85555158 | None:intergenic | 45.0% | |
| TACGAGGTCAGACCTTATGT+TGG | + | chr3.1:85552963-85552982 | None:intergenic | 45.0% | |
| TATGCTTGAGGATTACCGGT+TGG | + | chr3.1:85555002-85555021 | None:intergenic | 45.0% | |
| TCACTTCTTGGGCCATAGAA+TGG | + | chr3.1:85552056-85552075 | None:intergenic | 45.0% | |
| TCCTATGCACTCTCAACGAA+AGG | + | chr3.1:85553847-85553866 | None:intergenic | 45.0% | |
| TCGTGTTCGATGCAAAATGC+TGG | + | chr3.1:85553663-85553682 | None:intergenic | 45.0% | |
| TCTGGAGGAACCCATAAATG+AGG | + | chr3.1:85552138-85552157 | None:intergenic | 45.0% | |
| TGTTAGACATGCACTCAGAG+TGG | - | chr3.1:85553746-85553765 | MS.gene072949:intron | 45.0% | |
| ! | AATGACGGCGAAGTGTTACT+TGG | - | chr3.1:85552368-85552387 | MS.gene072949:intron | 45.0% |
| ! | CGCATCAATCTTAGTGTTGG+CGG | + | chr3.1:85552441-85552460 | None:intergenic | 45.0% |
| ! | GCTCTTTTGTCTTCGGAACT+GGG | + | chr3.1:85555551-85555570 | None:intergenic | 45.0% |
| ! | GCTGATGAAGGATCTAGAAC+TGG | - | chr3.1:85552611-85552630 | MS.gene072949:intron | 45.0% |
| ! | GGCCCAAGAAGTGATTTTTC+TGG | - | chr3.1:85552062-85552081 | MS.gene072949:CDS | 45.0% |
| ! | TACCGGTTGGAGTAGATACA+CGG | + | chr3.1:85554989-85555008 | None:intergenic | 45.0% |
| ! | TCACTGCGCTCTTTTGTCTT+CGG | + | chr3.1:85555558-85555577 | None:intergenic | 45.0% |
| !! | CAGGTATCGAATCATCTCGA+GGG | - | chr3.1:85552026-85552045 | MS.gene072949:CDS | 45.0% |
| !! | CATTTGAAAGGCATCTCTGG+AGG | + | chr3.1:85552153-85552172 | None:intergenic | 45.0% |
| !! | GACCATTTGAAAGGCATCTC+TGG | + | chr3.1:85552156-85552175 | None:intergenic | 45.0% |
| !! | GCATCAATCTTAGTGTTGGC+GGG | + | chr3.1:85552440-85552459 | None:intergenic | 45.0% |
| !! | TCTGACTTGAGTTGGCTACA+TGG | - | chr3.1:85554496-85554515 | MS.gene072949:CDS | 45.0% |
| !! | TGCTTAAGCTTTGGGTACAC+TGG | - | chr3.1:85553295-85553314 | MS.gene072949:intron | 45.0% |
| !! | TTAAGCTTTGGGTACACTGG+CGG | - | chr3.1:85553298-85553317 | MS.gene072949:intron | 45.0% |
| !! | AAAAAAATAAAAAAAAATTG+AGG | + | chr3.1:85551591-85551610 | None:intergenic | 5.0% |
| !! | AAAAAATAAAAAAAAATTGA+GGG | + | chr3.1:85551590-85551609 | None:intergenic | 5.0% |
| AAAGATAGTCATCTGGCGGC+TGG | + | chr3.1:85552905-85552924 | None:intergenic | 50.0% | |
| AGAACTGGAATCAAAGGCCC+CGG | - | chr3.1:85552626-85552645 | MS.gene072949:intron | 50.0% | |
| ATAGATTTACCTTGGGGGCG+TGG | + | chr3.1:85552753-85552772 | None:intergenic | 50.0% | |
| CAAACTGTGTGGGATACTGC+AGG | + | chr3.1:85555128-85555147 | None:intergenic | 50.0% | |
| CATGACAATTGCACGCGCTT+TGG | - | chr3.1:85554745-85554764 | MS.gene072949:CDS | 50.0% | |
| CATGGGAAGTTGTCTGCTAC+TGG | - | chr3.1:85554933-85554952 | MS.gene072949:intron | 50.0% | |
| CCTTGATGTACCCCTACAAC+CGG | + | chr3.1:85555479-85555498 | None:intergenic | 50.0% | |
| CGGAGGACCTGTACAAAAAC+AGG | + | chr3.1:85552314-85552333 | None:intergenic | 50.0% | |
| CTCGAGGGAGTTCCATTCTA+TGG | - | chr3.1:85552041-85552060 | MS.gene072949:CDS | 50.0% | |
| CTGATACTTCCACCGACGTT+AGG | - | chr3.1:85551350-85551369 | MS.gene072949:CDS | 50.0% | |
| CTGGAGGAGAGAGATCTAGA+AGG | - | chr3.1:85552342-85552361 | MS.gene072949:intron | 50.0% | |
| CTTACCAGAAACGGTTTCGG+AGG | + | chr3.1:85551434-85551453 | None:intergenic | 50.0% | |
| GACCGTGTATCTACTCCAAC+CGG | - | chr3.1:85554984-85555003 | MS.gene072949:intron | 50.0% | |
| GAGAATCAAAGAGGGGTCTC+AGG | + | chr3.1:85554097-85554116 | None:intergenic | 50.0% | |
| GAGGTCAGACCTTATGTTGG+TGG | + | chr3.1:85552960-85552979 | None:intergenic | 50.0% | |
| GATAAATGAAGGGCCGGCAA+TGG | + | chr3.1:85552579-85552598 | None:intergenic | 50.0% | |
| GCATTCCCACAAGAGCTTCA+TGG | - | chr3.1:85554915-85554934 | MS.gene072949:intron | 50.0% | |
| GGAGTAGATACACGGTCAAC+AGG | + | chr3.1:85554981-85555000 | None:intergenic | 50.0% | |
| TACACGGTCAACAGGTCCAA+CGG | + | chr3.1:85554973-85554992 | None:intergenic | 50.0% | |
| TCTCTCCTCCAGACGCATTT+CGG | + | chr3.1:85552334-85552353 | None:intergenic | 50.0% | |
| TGCTTCCGGTAACCTAACGT+CGG | + | chr3.1:85551365-85551384 | None:intergenic | 50.0% | |
| TTCCACCGACGTTAGGTTAC+CGG | - | chr3.1:85551357-85551376 | MS.gene072949:CDS | 50.0% | |
| TTTCGGAGGTGGAGGAGAAA+GGG | + | chr3.1:85551420-85551439 | None:intergenic | 50.0% | |
| ! | CCCTTTCGTTGAGAGTGCAT+AGG | - | chr3.1:85553843-85553862 | MS.gene072949:intron | 50.0% |
| ! | CGCTCTTTTGTCTTCGGAAC+TGG | + | chr3.1:85555552-85555571 | None:intergenic | 50.0% |
| ! | TGGAGTTGATTGTTTCCCCC+TGG | - | chr3.1:85551643-85551662 | MS.gene072949:intron | 50.0% |
| !! | AACGTCGGTGGAAGTATCAG+TGG | + | chr3.1:85551350-85551369 | None:intergenic | 50.0% |
| !! | ACGTCGGTGGAAGTATCAGT+GGG | + | chr3.1:85551349-85551368 | None:intergenic | 50.0% |
| !! | ATGGCTTTGGCTGGGTCAAA+TGG | - | chr3.1:85554789-85554808 | MS.gene072949:CDS | 50.0% |
| !! | CTGGGTCAAATGGTGGATCT+TGG | - | chr3.1:85554799-85554818 | MS.gene072949:CDS | 50.0% |
| !! | GCAGGTATCGAATCATCTCG+AGG | - | chr3.1:85552025-85552044 | MS.gene072949:CDS | 50.0% |
| !! | TATTCGAGTTGGTTCGGGCA+AGG | + | chr3.1:85555360-85555379 | None:intergenic | 50.0% |
| !! | TCAATCTTAGTGTTGGCGGG+AGG | + | chr3.1:85552437-85552456 | None:intergenic | 50.0% |
| !! | TTGGTTCGGGCAAGGTCTAA+AGG | + | chr3.1:85555352-85555371 | None:intergenic | 50.0% |
| ACCAGAAACGGTTTCGGAGG+TGG | + | chr3.1:85551431-85551450 | None:intergenic | 55.0% | |
| ACCCAAGACAGTAGGGTGCA+GGG | - | chr3.1:85554188-85554207 | MS.gene072949:CDS | 55.0% | |
| AGAAACGGTTTCGGAGGTGG+AGG | + | chr3.1:85551428-85551447 | None:intergenic | 55.0% | |
| CTAGATCCTTCATCAGCGGC+AGG | + | chr3.1:85552608-85552627 | None:intergenic | 55.0% | |
| GAGGCTGATGCTGATGCTTC+CGG | + | chr3.1:85551379-85551398 | None:intergenic | 55.0% | |
| GCTTGAGTCAAGACCCTGCT+TGG | + | chr3.1:85553909-85553928 | None:intergenic | 55.0% | |
| GCTTTGGCTGGGTCAAATGG+TGG | - | chr3.1:85554792-85554811 | MS.gene072949:CDS | 55.0% | |
| GTTTCGGAGGTGGAGGAGAA+AGG | + | chr3.1:85551421-85551440 | None:intergenic | 55.0% | |
| TACCCAAGACAGTAGGGTGC+AGG | - | chr3.1:85554187-85554206 | MS.gene072949:CDS | 55.0% | |
| TAGAATCATCCACGCCCCCA+AGG | - | chr3.1:85552741-85552760 | MS.gene072949:intron | 55.0% | |
| TCCACCTCCGAAACCGTTTC+TGG | - | chr3.1:85551427-85551446 | MS.gene072949:intron | 55.0% | |
| TCCCTGCACCCTACTGTCTT+GGG | + | chr3.1:85554192-85554211 | None:intergenic | 55.0% | |
| TTCCCTGCACCCTACTGTCT+TGG | + | chr3.1:85554193-85554212 | None:intergenic | 55.0% | |
| TTCCGGTAACCTAACGTCGG+TGG | + | chr3.1:85551362-85551381 | None:intergenic | 55.0% | |
| TTCGGTCTGCAGTTCATCCG+TGG | - | chr3.1:85553061-85553080 | MS.gene072949:intron | 55.0% | |
| ! | CCGGTTGTAGGGGTACATCA+AGG | - | chr3.1:85555476-85555495 | MS.gene072949:CDS | 55.0% |
| !! | TCATCTGTGGTGTTGCTCGG+TGG | - | chr3.1:85552689-85552708 | MS.gene072949:intron | 55.0% |
| ATAGTCATCTGGCGGCTGGC+AGG | + | chr3.1:85552901-85552920 | None:intergenic | 60.0% | |
| CAGGTCCTCCGAAATGCGTC+TGG | - | chr3.1:85552323-85552342 | MS.gene072949:intron | 60.0% | |
| CTCCTCCAGACGCATTTCGG+AGG | + | chr3.1:85552331-85552350 | None:intergenic | 60.0% | |
| GCGGAGGATGCTGCATGGAA+GGG | + | chr3.1:85552499-85552518 | None:intergenic | 60.0% | |
| GGAGTCAACTGTCCTCCACG+CGG | + | chr3.1:85552518-85552537 | None:intergenic | 60.0% | |
| GGTCAACAGGTCCAACGGCA+CGG | + | chr3.1:85554968-85554987 | None:intergenic | 60.0% | |
| GTCCTCCGAAATGCGTCTGG+AGG | - | chr3.1:85552326-85552345 | MS.gene072949:intron | 60.0% | |
| TCAAAGAGGGGTCTCAGGGC+AGG | + | chr3.1:85554092-85554111 | None:intergenic | 60.0% | |
| TCTCAGCCTGCCGCTGATGA+AGG | - | chr3.1:85552599-85552618 | MS.gene072949:intron | 60.0% | |
| ! | GGATCTGCTGCTTGAACCGC+CGG | + | chr3.1:85555530-85555549 | None:intergenic | 60.0% |
| ATCTGGCGGCTGGCAGGTGT+TGG | + | chr3.1:85552895-85552914 | None:intergenic | 65.0% | |
| ATGCAGCATCCTCCGCGTGG+AGG | - | chr3.1:85552503-85552522 | MS.gene072949:intron | 65.0% | |
| CGCGGAGGATGCTGCATGGA+AGG | + | chr3.1:85552500-85552519 | None:intergenic | 65.0% | |
| GCACGCGCTTTGGCGTATGC+AGG | - | chr3.1:85554755-85554774 | MS.gene072949:CDS | 65.0% | |
| GGAGAAAGGGCCACGAGCAC+CGG | + | chr3.1:85551407-85551426 | None:intergenic | 65.0% | |
| GTCAACTGTCCTCCACGCGG+AGG | + | chr3.1:85552515-85552534 | None:intergenic | 65.0% | |
| TCAGCATCAGCCTCCTCCGC+CGG | - | chr3.1:85551385-85551404 | MS.gene072949:CDS | 65.0% | |
| TCCACGCGGAGGATGCTGCA+TGG | + | chr3.1:85552504-85552523 | None:intergenic | 65.0% | |
| TCCATGCAGCATCCTCCGCG+TGG | - | chr3.1:85552500-85552519 | MS.gene072949:intron | 65.0% | |
| ! | GGCAGTTCTAGCCGTGCCGT+TGG | - | chr3.1:85554954-85554973 | MS.gene072949:intron | 65.0% |
| !! | GAAAGGGCCACGAGCACCGG+CGG | + | chr3.1:85551404-85551423 | None:intergenic | 70.0% |
| ! | GCCTCCTCCGCCGGTGCTCG+TGG | - | chr3.1:85551394-85551413 | MS.gene072949:CDS | 80.0% |
| !!! | AGGGCCACGAGCACCGGCGG+AGG | + | chr3.1:85551401-85551420 | None:intergenic | 80.0% |
| !!! | GCCACGAGCACCGGCGGAGG+AGG | + | chr3.1:85551398-85551417 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 85551340 | 85555577 | 85551340 | ID=MS.gene072949 |
| chr3.1 | mRNA | 85551340 | 85555577 | 85551340 | ID=MS.gene072949.t1;Parent=MS.gene072949 |
| chr3.1 | exon | 85555469 | 85555577 | 85555469 | ID=MS.gene072949.t1.exon1;Parent=MS.gene072949.t1 |
| chr3.1 | CDS | 85555469 | 85555577 | 85555469 | ID=cds.MS.gene072949.t1;Parent=MS.gene072949.t1 |
| chr3.1 | exon | 85554709 | 85554896 | 85554709 | ID=MS.gene072949.t1.exon2;Parent=MS.gene072949.t1 |
| chr3.1 | CDS | 85554709 | 85554896 | 85554709 | ID=cds.MS.gene072949.t1;Parent=MS.gene072949.t1 |
| chr3.1 | exon | 85554155 | 85554591 | 85554155 | ID=MS.gene072949.t1.exon3;Parent=MS.gene072949.t1 |
| chr3.1 | CDS | 85554155 | 85554591 | 85554155 | ID=cds.MS.gene072949.t1;Parent=MS.gene072949.t1 |
| chr3.1 | exon | 85553948 | 85554038 | 85553948 | ID=MS.gene072949.t1.exon4;Parent=MS.gene072949.t1 |
| chr3.1 | CDS | 85553948 | 85554038 | 85553948 | ID=cds.MS.gene072949.t1;Parent=MS.gene072949.t1 |
| chr3.1 | exon | 85551912 | 85552140 | 85551912 | ID=MS.gene072949.t1.exon5;Parent=MS.gene072949.t1 |
| chr3.1 | CDS | 85551912 | 85552140 | 85551912 | ID=cds.MS.gene072949.t1;Parent=MS.gene072949.t1 |
| chr3.1 | exon | 85551340 | 85551431 | 85551340 | ID=MS.gene072949.t1.exon6;Parent=MS.gene072949.t1 |
| chr3.1 | CDS | 85551340 | 85551431 | 85551340 | ID=cds.MS.gene072949.t1;Parent=MS.gene072949.t1 |
| Gene Sequence |
| Protein sequence |
