Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073017.t1 | XP_003603547.1 | 77.5 | 453 | 48 | 4 | 1 | 451 | 1 | 401 | 1.20E-113 | 420.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073017.t1 | Q9SJA8 | 38.9 | 434 | 118 | 10 | 1 | 419 | 1 | 302 | 2.5e-48 | 194.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073017.t1 | G7J2S9 | 77.5 | 453 | 48 | 4 | 1 | 451 | 1 | 401 | 8.5e-114 | 420.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene073017.t1 | TF | WRKY |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073017.t1 | MTR_3g108960 | 82.040 | 451 | 31 | 4 | 1 | 451 | 1 | 401 | 0.0 | 666 |
MS.gene073017.t1 | MTR_1g009613 | 61.635 | 159 | 51 | 5 | 279 | 432 | 178 | 331 | 1.03e-56 | 191 |
MS.gene073017.t1 | MTR_1g009613 | 43.192 | 213 | 84 | 9 | 1 | 179 | 1 | 210 | 4.33e-29 | 117 |
MS.gene073017.t1 | MTR_4g127040 | 62.143 | 140 | 43 | 4 | 281 | 419 | 174 | 304 | 1.00e-51 | 177 |
MS.gene073017.t1 | MTR_4g127040 | 33.178 | 214 | 89 | 8 | 1 | 179 | 1 | 195 | 3.99e-13 | 70.5 |
MS.gene073017.t1 | MTR_0117s0040 | 92.593 | 81 | 5 | 1 | 339 | 419 | 53 | 132 | 7.46e-47 | 162 |
MS.gene073017.t1 | MTR_4g094908 | 58.871 | 124 | 49 | 1 | 296 | 417 | 200 | 323 | 5.34e-42 | 152 |
MS.gene073017.t1 | MTR_5g016610 | 59.483 | 116 | 46 | 1 | 303 | 417 | 141 | 256 | 6.14e-40 | 144 |
MS.gene073017.t1 | MTR_1g070455 | 62.500 | 80 | 30 | 0 | 338 | 417 | 271 | 350 | 3.18e-31 | 123 |
MS.gene073017.t1 | MTR_0229s0060 | 43.192 | 213 | 84 | 9 | 1 | 179 | 1 | 210 | 1.78e-29 | 115 |
MS.gene073017.t1 | MTR_2g032030 | 48.454 | 97 | 45 | 2 | 326 | 417 | 228 | 324 | 5.77e-24 | 103 |
MS.gene073017.t1 | MTR_2g032030 | 48.454 | 97 | 45 | 2 | 326 | 417 | 228 | 324 | 6.87e-24 | 104 |
MS.gene073017.t1 | MTR_2g016770 | 52.439 | 82 | 38 | 1 | 337 | 417 | 11 | 92 | 1.13e-23 | 99.0 |
MS.gene073017.t1 | MTR_2g016770 | 51.852 | 81 | 38 | 1 | 338 | 417 | 4 | 84 | 6.57e-23 | 96.7 |
MS.gene073017.t1 | MTR_2g083870 | 49.462 | 93 | 31 | 2 | 336 | 417 | 50 | 137 | 6.94e-23 | 97.8 |
MS.gene073017.t1 | MTR_7g079040 | 43.396 | 106 | 49 | 3 | 312 | 417 | 117 | 211 | 3.28e-22 | 97.4 |
MS.gene073017.t1 | MTR_2g024350 | 56.250 | 64 | 28 | 0 | 354 | 417 | 2 | 65 | 3.35e-21 | 92.4 |
MS.gene073017.t1 | MTR_8g087000 | 40.952 | 105 | 55 | 2 | 320 | 417 | 29 | 133 | 3.40e-21 | 92.8 |
MS.gene073017.t1 | MTR_2g024380 | 48.750 | 80 | 40 | 1 | 338 | 417 | 230 | 308 | 8.29e-21 | 95.1 |
MS.gene073017.t1 | MTR_8g087000 | 57.627 | 59 | 25 | 0 | 359 | 417 | 76 | 134 | 1.10e-20 | 91.3 |
MS.gene073017.t1 | MTR_8g028565 | 50.000 | 80 | 39 | 1 | 338 | 417 | 134 | 212 | 2.14e-20 | 92.4 |
MS.gene073017.t1 | MTR_7g109600 | 43.023 | 86 | 40 | 1 | 341 | 417 | 25 | 110 | 2.34e-20 | 90.9 |
MS.gene073017.t1 | MTR_8g098945 | 58.333 | 60 | 25 | 0 | 360 | 419 | 129 | 188 | 4.33e-18 | 84.3 |
MS.gene073017.t1 | MTR_5g043880 | 44.706 | 85 | 46 | 1 | 336 | 420 | 100 | 183 | 6.35e-18 | 84.0 |
MS.gene073017.t1 | MTR_1g099600 | 43.750 | 80 | 44 | 1 | 339 | 417 | 163 | 242 | 1.38e-17 | 83.6 |
MS.gene073017.t1 | MTR_2g023930 | 48.649 | 74 | 38 | 0 | 344 | 417 | 289 | 362 | 2.27e-17 | 85.1 |
MS.gene073017.t1 | MTR_7g062220 | 37.615 | 109 | 53 | 3 | 339 | 436 | 106 | 210 | 2.79e-17 | 82.8 |
MS.gene073017.t1 | MTR_8g092140 | 51.613 | 62 | 29 | 1 | 356 | 417 | 156 | 216 | 4.04e-17 | 80.9 |
MS.gene073017.t1 | MTR_1g086790 | 40.217 | 92 | 54 | 1 | 326 | 417 | 124 | 214 | 6.58e-17 | 82.0 |
MS.gene073017.t1 | MTR_4g132430 | 47.297 | 74 | 39 | 0 | 344 | 417 | 111 | 184 | 7.50e-17 | 82.0 |
MS.gene073017.t1 | MTR_3g053330 | 45.946 | 74 | 40 | 0 | 344 | 417 | 235 | 308 | 7.97e-17 | 82.8 |
MS.gene073017.t1 | MTR_2g088000 | 47.297 | 74 | 39 | 0 | 344 | 417 | 333 | 406 | 8.54e-17 | 83.2 |
MS.gene073017.t1 | MTR_3g095080 | 51.613 | 62 | 29 | 1 | 356 | 417 | 140 | 200 | 1.05e-16 | 79.3 |
MS.gene073017.t1 | MTR_3g095080 | 51.613 | 62 | 29 | 1 | 356 | 417 | 164 | 224 | 1.07e-16 | 79.7 |
MS.gene073017.t1 | MTR_5g091390 | 47.222 | 72 | 37 | 1 | 347 | 418 | 144 | 214 | 1.21e-16 | 80.9 |
MS.gene073017.t1 | MTR_4g132430 | 47.297 | 74 | 39 | 0 | 344 | 417 | 245 | 318 | 1.28e-16 | 82.4 |
MS.gene073017.t1 | MTR_8g007270 | 44.706 | 85 | 43 | 3 | 336 | 417 | 127 | 210 | 1.40e-16 | 79.0 |
MS.gene073017.t1 | MTR_7g109800 | 38.614 | 101 | 60 | 2 | 317 | 417 | 103 | 201 | 1.40e-16 | 80.5 |
MS.gene073017.t1 | MTR_7g110720 | 45.946 | 74 | 40 | 0 | 344 | 417 | 200 | 273 | 2.64e-16 | 81.3 |
MS.gene073017.t1 | MTR_7g110720 | 45.946 | 74 | 40 | 0 | 344 | 417 | 173 | 246 | 2.92e-16 | 80.9 |
MS.gene073017.t1 | MTR_5g094430 | 47.297 | 74 | 38 | 1 | 344 | 417 | 348 | 420 | 4.81e-16 | 80.9 |
MS.gene073017.t1 | MTR_4g094588 | 45.070 | 71 | 38 | 1 | 347 | 417 | 165 | 234 | 4.88e-16 | 79.3 |
MS.gene073017.t1 | MTR_5g094430 | 47.297 | 74 | 38 | 1 | 344 | 417 | 236 | 308 | 5.21e-16 | 80.1 |
MS.gene073017.t1 | MTR_5g094430 | 47.297 | 74 | 38 | 1 | 344 | 417 | 214 | 286 | 5.29e-16 | 80.1 |
MS.gene073017.t1 | MTR_8g067635 | 39.423 | 104 | 55 | 2 | 337 | 440 | 329 | 424 | 5.44e-16 | 80.5 |
MS.gene073017.t1 | MTR_1g013760 | 52.632 | 57 | 27 | 0 | 361 | 417 | 141 | 197 | 5.44e-16 | 78.6 |
MS.gene073017.t1 | MTR_3g056100 | 43.678 | 87 | 42 | 2 | 344 | 424 | 386 | 471 | 6.55e-16 | 80.5 |
MS.gene073017.t1 | MTR_8g069935 | 43.210 | 81 | 46 | 0 | 337 | 417 | 308 | 388 | 6.81e-16 | 80.1 |
MS.gene073017.t1 | MTR_3g056100 | 43.678 | 87 | 42 | 2 | 344 | 424 | 399 | 484 | 6.81e-16 | 80.5 |
MS.gene073017.t1 | MTR_5g074400 | 48.052 | 77 | 39 | 1 | 341 | 417 | 401 | 476 | 7.48e-16 | 80.5 |
MS.gene073017.t1 | MTR_3g056100 | 43.678 | 87 | 42 | 2 | 344 | 424 | 242 | 327 | 9.24e-16 | 79.3 |
MS.gene073017.t1 | MTR_3g031220 | 47.436 | 78 | 40 | 1 | 340 | 417 | 345 | 421 | 1.00e-15 | 79.7 |
MS.gene073017.t1 | MTR_3g056100 | 43.678 | 87 | 42 | 2 | 344 | 424 | 255 | 340 | 1.07e-15 | 79.3 |
MS.gene073017.t1 | MTR_7g100510 | 52.239 | 67 | 31 | 1 | 352 | 418 | 353 | 418 | 1.10e-15 | 79.3 |
MS.gene073017.t1 | MTR_7g100510 | 45.122 | 82 | 38 | 4 | 356 | 436 | 184 | 259 | 9.62e-13 | 70.1 |
MS.gene073017.t1 | MTR_4g107970 | 47.368 | 76 | 36 | 3 | 344 | 417 | 162 | 235 | 1.53e-15 | 79.3 |
MS.gene073017.t1 | MTR_4g007060 | 45.455 | 77 | 38 | 1 | 358 | 434 | 126 | 198 | 1.61e-15 | 77.0 |
MS.gene073017.t1 | MTR_2g033820 | 45.333 | 75 | 40 | 1 | 343 | 417 | 186 | 259 | 1.85e-15 | 78.2 |
MS.gene073017.t1 | MTR_7g080000 | 38.596 | 114 | 55 | 4 | 318 | 417 | 376 | 488 | 2.03e-15 | 79.3 |
MS.gene073017.t1 | MTR_7g080000 | 49.123 | 57 | 27 | 2 | 361 | 417 | 235 | 289 | 6.27e-11 | 65.1 |
MS.gene073017.t1 | MTR_2g105060 | 36.047 | 86 | 43 | 1 | 344 | 417 | 66 | 151 | 2.06e-15 | 75.9 |
MS.gene073017.t1 | MTR_7g009730 | 48.101 | 79 | 33 | 2 | 341 | 417 | 204 | 276 | 2.06e-15 | 79.0 |
MS.gene073017.t1 | MTR_4g107970 | 47.368 | 76 | 36 | 3 | 344 | 417 | 239 | 312 | 2.18e-15 | 79.0 |
MS.gene073017.t1 | MTR_4g007060 | 45.455 | 77 | 38 | 1 | 358 | 434 | 160 | 232 | 2.53e-15 | 77.0 |
MS.gene073017.t1 | MTR_2g105060 | 36.047 | 86 | 43 | 1 | 344 | 417 | 141 | 226 | 2.55e-15 | 77.0 |
MS.gene073017.t1 | MTR_1g015140 | 43.662 | 71 | 39 | 1 | 347 | 417 | 89 | 158 | 2.92e-15 | 73.6 |
MS.gene073017.t1 | MTR_7g011820 | 53.226 | 62 | 28 | 1 | 356 | 417 | 406 | 466 | 3.72e-15 | 77.8 |
MS.gene073017.t1 | MTR_7g011820 | 46.053 | 76 | 38 | 3 | 357 | 431 | 224 | 297 | 1.85e-13 | 72.8 |
MS.gene073017.t1 | MTR_3g106060 | 45.455 | 66 | 34 | 1 | 361 | 426 | 139 | 202 | 4.36e-15 | 75.9 |
MS.gene073017.t1 | MTR_3g009470 | 39.604 | 101 | 55 | 2 | 322 | 417 | 452 | 551 | 4.43e-15 | 78.2 |
MS.gene073017.t1 | MTR_3g009470 | 47.368 | 57 | 28 | 2 | 361 | 417 | 281 | 335 | 3.28e-11 | 65.9 |
MS.gene073017.t1 | MTR_8g099350 | 40.816 | 98 | 46 | 3 | 336 | 422 | 100 | 196 | 4.79e-15 | 76.6 |
MS.gene073017.t1 | MTR_1g013790 | 51.667 | 60 | 29 | 0 | 358 | 417 | 99 | 158 | 5.25e-15 | 75.1 |
MS.gene073017.t1 | MTR_4g094412 | 46.667 | 75 | 36 | 1 | 343 | 417 | 221 | 291 | 6.11e-15 | 77.0 |
MS.gene073017.t1 | MTR_4g094412 | 46.667 | 75 | 36 | 1 | 343 | 417 | 230 | 300 | 6.67e-15 | 77.0 |
MS.gene073017.t1 | MTR_4g130900 | 55.000 | 60 | 26 | 1 | 358 | 417 | 357 | 415 | 7.04e-15 | 77.0 |
MS.gene073017.t1 | MTR_5g067680 | 52.381 | 63 | 28 | 1 | 359 | 419 | 201 | 263 | 8.91e-15 | 75.9 |
MS.gene073017.t1 | MTR_7g080020 | 34.028 | 144 | 69 | 5 | 308 | 431 | 421 | 558 | 1.05e-14 | 77.0 |
MS.gene073017.t1 | MTR_7g080020 | 43.939 | 66 | 35 | 2 | 356 | 421 | 276 | 339 | 7.81e-11 | 64.7 |
MS.gene073017.t1 | MTR_4g122530 | 44.595 | 74 | 40 | 1 | 344 | 417 | 192 | 264 | 1.23e-14 | 75.9 |
MS.gene073017.t1 | MTR_8g067650 | 39.640 | 111 | 57 | 3 | 331 | 440 | 313 | 414 | 1.25e-14 | 76.3 |
MS.gene073017.t1 | MTR_2g045360 | 41.333 | 75 | 44 | 0 | 344 | 418 | 195 | 269 | 1.84e-14 | 75.5 |
MS.gene073017.t1 | MTR_5g042920 | 50.000 | 62 | 30 | 1 | 356 | 417 | 316 | 376 | 2.18e-14 | 75.1 |
MS.gene073017.t1 | MTR_5g042920 | 47.761 | 67 | 32 | 3 | 352 | 417 | 142 | 206 | 2.00e-11 | 66.2 |
MS.gene073017.t1 | MTR_4g013260 | 42.857 | 77 | 43 | 1 | 341 | 417 | 317 | 392 | 2.64e-14 | 75.1 |
MS.gene073017.t1 | MTR_6g086555 | 28.571 | 210 | 124 | 9 | 222 | 417 | 66 | 263 | 2.86e-14 | 74.7 |
MS.gene073017.t1 | MTR_3g104750 | 41.892 | 74 | 42 | 1 | 344 | 417 | 88 | 160 | 4.57e-14 | 70.5 |
MS.gene073017.t1 | MTR_1g078260 | 41.584 | 101 | 46 | 4 | 329 | 417 | 205 | 304 | 5.64e-14 | 74.3 |
MS.gene073017.t1 | MTR_4g082580 | 48.387 | 62 | 31 | 1 | 356 | 417 | 274 | 334 | 1.26e-13 | 72.8 |
MS.gene073017.t1 | MTR_7g117200 | 42.553 | 94 | 46 | 5 | 336 | 424 | 92 | 182 | 1.51e-13 | 72.0 |
MS.gene073017.t1 | MTR_7g079010 | 40.000 | 80 | 44 | 2 | 341 | 417 | 119 | 197 | 2.19e-13 | 69.7 |
MS.gene073017.t1 | MTR_6g053200 | 38.202 | 89 | 49 | 2 | 336 | 419 | 302 | 389 | 2.19e-13 | 72.4 |
MS.gene073017.t1 | MTR_1g077780 | 37.624 | 101 | 59 | 2 | 341 | 438 | 43 | 142 | 2.51e-13 | 67.8 |
MS.gene073017.t1 | MTR_3g090860 | 52.632 | 57 | 25 | 1 | 361 | 415 | 134 | 190 | 7.04e-13 | 70.1 |
MS.gene073017.t1 | MTR_7g071120 | 32.143 | 140 | 83 | 3 | 278 | 417 | 253 | 380 | 1.21e-12 | 70.1 |
MS.gene073017.t1 | MTR_7g028415 | 45.161 | 62 | 33 | 1 | 356 | 417 | 89 | 149 | 1.87e-12 | 65.9 |
MS.gene073017.t1 | MTR_7g028710 | 45.161 | 62 | 33 | 1 | 356 | 417 | 89 | 149 | 1.87e-12 | 65.9 |
MS.gene073017.t1 | MTR_3g095040 | 41.935 | 62 | 35 | 1 | 357 | 418 | 115 | 175 | 4.09e-12 | 65.5 |
MS.gene073017.t1 | MTR_8g092010 | 44.262 | 61 | 33 | 1 | 357 | 417 | 105 | 164 | 4.23e-12 | 65.1 |
MS.gene073017.t1 | MTR_4g049760 | 45.614 | 57 | 31 | 0 | 361 | 417 | 291 | 347 | 7.05e-12 | 67.8 |
MS.gene073017.t1 | MTR_5g097490 | 43.662 | 71 | 39 | 1 | 347 | 417 | 239 | 308 | 9.38e-12 | 67.0 |
MS.gene073017.t1 | MTR_4g049790 | 40.580 | 69 | 40 | 1 | 350 | 417 | 301 | 369 | 2.00e-11 | 66.2 |
MS.gene073017.t1 | MTR_3g009470 | 47.368 | 57 | 28 | 2 | 361 | 417 | 281 | 335 | 3.00e-11 | 65.9 |
MS.gene073017.t1 | MTR_3g031220 | 39.535 | 86 | 46 | 3 | 332 | 417 | 174 | 253 | 5.74e-11 | 64.3 |
MS.gene073017.t1 | MTR_8g027860 | 49.123 | 57 | 27 | 1 | 361 | 415 | 137 | 193 | 8.11e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073017.t1 | AT4G31550 | 63.690 | 168 | 52 | 4 | 272 | 434 | 152 | 315 | 3.20e-63 | 207 |
MS.gene073017.t1 | AT4G31550 | 39.512 | 205 | 82 | 6 | 1 | 179 | 1 | 189 | 4.20e-30 | 119 |
MS.gene073017.t1 | AT4G31550 | 63.314 | 169 | 52 | 5 | 272 | 434 | 152 | 316 | 1.84e-61 | 203 |
MS.gene073017.t1 | AT4G31550 | 39.512 | 205 | 82 | 6 | 1 | 179 | 1 | 189 | 3.95e-30 | 119 |
MS.gene073017.t1 | AT2G24570 | 58.084 | 167 | 57 | 6 | 278 | 436 | 154 | 315 | 5.01e-53 | 181 |
MS.gene073017.t1 | AT2G24570 | 37.705 | 244 | 118 | 11 | 1 | 219 | 1 | 235 | 2.11e-23 | 100 |
MS.gene073017.t1 | AT4G24240 | 51.923 | 156 | 58 | 5 | 267 | 417 | 195 | 338 | 2.26e-42 | 153 |
MS.gene073017.t1 | AT4G31550 | 64.912 | 114 | 35 | 3 | 272 | 380 | 152 | 265 | 8.53e-38 | 139 |
MS.gene073017.t1 | AT4G31550 | 39.512 | 205 | 82 | 6 | 1 | 179 | 1 | 189 | 2.05e-30 | 119 |
MS.gene073017.t1 | AT2G30590 | 58.879 | 107 | 41 | 2 | 321 | 424 | 271 | 377 | 5.81e-37 | 139 |
MS.gene073017.t1 | AT2G23320 | 54.867 | 113 | 46 | 3 | 309 | 417 | 186 | 297 | 1.01e-36 | 137 |
MS.gene073017.t1 | AT3G04670 | 45.238 | 168 | 74 | 5 | 254 | 420 | 172 | 322 | 2.96e-36 | 136 |
MS.gene073017.t1 | AT5G28650 | 41.237 | 194 | 96 | 6 | 231 | 420 | 143 | 322 | 5.41e-36 | 135 |
MS.gene073017.t1 | AT4G24240 | 50.420 | 119 | 42 | 5 | 267 | 380 | 195 | 301 | 3.58e-24 | 102 |
MS.gene073017.t1 | AT3G58710 | 49.462 | 93 | 31 | 2 | 336 | 417 | 40 | 127 | 3.61e-23 | 99.0 |
MS.gene073017.t1 | AT2G34830 | 50.575 | 87 | 38 | 2 | 336 | 417 | 186 | 272 | 3.72e-23 | 101 |
MS.gene073017.t1 | AT2G34830 | 50.575 | 87 | 38 | 2 | 336 | 417 | 195 | 281 | 4.99e-23 | 101 |
MS.gene073017.t1 | AT1G29280 | 61.017 | 59 | 23 | 0 | 359 | 417 | 73 | 131 | 7.64e-23 | 97.8 |
MS.gene073017.t1 | AT4G01250 | 44.898 | 98 | 49 | 1 | 320 | 417 | 93 | 185 | 1.18e-22 | 98.2 |
MS.gene073017.t1 | AT1G30650 | 46.392 | 97 | 47 | 2 | 326 | 417 | 178 | 274 | 1.49e-22 | 100 |
MS.gene073017.t1 | AT3G58710 | 48.387 | 93 | 32 | 2 | 336 | 417 | 41 | 128 | 1.96e-22 | 97.1 |
MS.gene073017.t1 | AT5G45050 | 33.503 | 197 | 110 | 8 | 225 | 417 | 1058 | 1237 | 7.14e-21 | 96.7 |
MS.gene073017.t1 | AT5G45050 | 33.503 | 197 | 110 | 8 | 225 | 417 | 919 | 1098 | 7.28e-21 | 96.7 |
MS.gene073017.t1 | AT5G45050 | 33.503 | 197 | 110 | 8 | 225 | 417 | 1030 | 1209 | 7.49e-21 | 96.7 |
MS.gene073017.t1 | AT5G52830 | 51.220 | 82 | 36 | 2 | 336 | 417 | 145 | 222 | 7.53e-21 | 94.0 |
MS.gene073017.t1 | AT3G04670 | 43.182 | 132 | 57 | 5 | 254 | 384 | 172 | 286 | 7.42e-20 | 90.1 |
MS.gene073017.t1 | AT2G23320 | 53.947 | 76 | 30 | 3 | 309 | 380 | 186 | 260 | 1.80e-18 | 85.5 |
MS.gene073017.t1 | AT1G29860 | 37.607 | 117 | 70 | 2 | 303 | 417 | 77 | 192 | 2.25e-18 | 85.5 |
MS.gene073017.t1 | AT4G39410 | 46.988 | 83 | 40 | 2 | 338 | 417 | 198 | 279 | 4.22e-18 | 85.1 |
MS.gene073017.t1 | AT1G69310 | 45.349 | 86 | 45 | 2 | 336 | 420 | 122 | 206 | 9.36e-18 | 84.0 |
MS.gene073017.t1 | AT1G69310 | 45.349 | 86 | 45 | 2 | 336 | 420 | 122 | 206 | 9.36e-18 | 84.0 |
MS.gene073017.t1 | AT1G69310 | 45.349 | 86 | 45 | 2 | 336 | 420 | 122 | 206 | 9.36e-18 | 84.0 |
MS.gene073017.t1 | AT4G04450 | 42.553 | 94 | 54 | 0 | 324 | 417 | 162 | 255 | 1.74e-17 | 84.7 |
MS.gene073017.t1 | AT4G18170 | 41.053 | 95 | 50 | 2 | 323 | 417 | 140 | 228 | 1.75e-17 | 83.6 |
MS.gene073017.t1 | AT2G47260 | 40.217 | 92 | 54 | 1 | 326 | 417 | 140 | 230 | 2.37e-17 | 83.6 |
MS.gene073017.t1 | AT5G07100 | 37.143 | 105 | 64 | 2 | 315 | 418 | 188 | 291 | 3.72e-17 | 82.4 |
MS.gene073017.t1 | AT4G04450 | 42.553 | 94 | 54 | 0 | 324 | 417 | 256 | 349 | 4.51e-17 | 84.0 |
MS.gene073017.t1 | AT5G26170 | 41.333 | 75 | 43 | 1 | 347 | 421 | 100 | 173 | 4.85e-17 | 79.0 |
MS.gene073017.t1 | AT4G23550 | 51.613 | 62 | 30 | 0 | 357 | 418 | 137 | 198 | 7.40e-17 | 81.6 |
MS.gene073017.t1 | AT1G62300 | 47.297 | 74 | 39 | 0 | 344 | 417 | 296 | 369 | 1.17e-16 | 82.8 |
MS.gene073017.t1 | AT2G44745 | 44.048 | 84 | 43 | 3 | 337 | 417 | 119 | 201 | 1.22e-16 | 79.0 |
MS.gene073017.t1 | AT5G07100 | 37.143 | 105 | 64 | 2 | 315 | 418 | 95 | 198 | 1.34e-16 | 79.0 |
MS.gene073017.t1 | AT5G07100 | 37.143 | 105 | 64 | 2 | 315 | 418 | 95 | 198 | 1.34e-16 | 79.0 |
MS.gene073017.t1 | AT5G07100 | 37.143 | 105 | 64 | 2 | 315 | 418 | 95 | 198 | 1.34e-16 | 79.0 |
MS.gene073017.t1 | AT5G07100 | 37.143 | 105 | 64 | 2 | 315 | 418 | 95 | 198 | 1.34e-16 | 79.0 |
MS.gene073017.t1 | AT4G22070 | 47.297 | 74 | 39 | 0 | 344 | 417 | 281 | 354 | 1.40e-16 | 82.4 |
MS.gene073017.t1 | AT4G22070 | 47.297 | 74 | 39 | 0 | 344 | 417 | 281 | 354 | 1.40e-16 | 82.4 |
MS.gene073017.t1 | AT4G22070 | 47.297 | 74 | 39 | 0 | 344 | 417 | 281 | 354 | 1.40e-16 | 82.4 |
MS.gene073017.t1 | AT4G22070 | 47.297 | 74 | 39 | 0 | 344 | 417 | 281 | 354 | 1.40e-16 | 82.4 |
MS.gene073017.t1 | AT5G49520 | 45.946 | 74 | 39 | 1 | 344 | 417 | 205 | 277 | 1.63e-16 | 81.6 |
MS.gene073017.t1 | AT2G37260 | 45.882 | 85 | 43 | 2 | 338 | 420 | 245 | 328 | 2.39e-16 | 80.5 |
MS.gene073017.t1 | AT4G31800 | 37.615 | 109 | 64 | 2 | 346 | 452 | 97 | 203 | 2.50e-16 | 79.0 |
MS.gene073017.t1 | AT2G37260 | 45.882 | 85 | 43 | 2 | 338 | 420 | 243 | 326 | 2.53e-16 | 80.5 |
MS.gene073017.t1 | AT2G37260 | 53.846 | 65 | 29 | 1 | 356 | 420 | 345 | 408 | 3.00e-16 | 80.9 |
MS.gene073017.t1 | AT5G46350 | 46.479 | 71 | 37 | 1 | 347 | 417 | 170 | 239 | 3.59e-16 | 79.7 |
MS.gene073017.t1 | AT5G15130 | 43.434 | 99 | 42 | 4 | 321 | 417 | 156 | 242 | 3.60e-16 | 81.3 |
MS.gene073017.t1 | AT5G15130 | 43.434 | 99 | 42 | 4 | 321 | 417 | 198 | 284 | 4.24e-16 | 80.9 |
MS.gene073017.t1 | AT4G31800 | 37.615 | 109 | 64 | 2 | 346 | 452 | 162 | 268 | 6.42e-16 | 79.0 |
MS.gene073017.t1 | AT4G26640 | 47.297 | 74 | 38 | 1 | 344 | 417 | 189 | 261 | 1.55e-15 | 78.6 |
MS.gene073017.t1 | AT4G26640 | 47.297 | 74 | 38 | 1 | 344 | 417 | 189 | 261 | 1.55e-15 | 78.6 |
MS.gene073017.t1 | AT4G26640 | 47.297 | 74 | 38 | 1 | 344 | 417 | 189 | 261 | 1.55e-15 | 78.6 |
MS.gene073017.t1 | AT4G26640 | 47.297 | 74 | 38 | 1 | 344 | 417 | 189 | 261 | 1.55e-15 | 78.6 |
MS.gene073017.t1 | AT4G26640 | 47.297 | 74 | 38 | 1 | 344 | 417 | 293 | 365 | 1.72e-15 | 79.0 |
MS.gene073017.t1 | AT4G26640 | 47.297 | 74 | 38 | 1 | 344 | 417 | 325 | 397 | 1.73e-15 | 79.0 |
MS.gene073017.t1 | AT4G26640 | 47.297 | 74 | 38 | 1 | 344 | 417 | 365 | 437 | 1.80e-15 | 79.0 |
MS.gene073017.t1 | AT4G01720 | 47.297 | 74 | 39 | 0 | 344 | 417 | 223 | 296 | 2.56e-15 | 78.6 |
MS.gene073017.t1 | AT2G04880 | 46.479 | 71 | 37 | 1 | 347 | 417 | 270 | 339 | 2.85e-15 | 78.2 |
MS.gene073017.t1 | AT2G04880 | 46.479 | 71 | 37 | 1 | 347 | 417 | 294 | 363 | 3.45e-15 | 78.2 |
MS.gene073017.t1 | AT2G38470 | 45.946 | 74 | 39 | 1 | 344 | 417 | 346 | 418 | 5.25e-15 | 77.4 |
MS.gene073017.t1 | AT1G64000 | 49.180 | 61 | 30 | 1 | 357 | 417 | 111 | 170 | 5.34e-15 | 73.9 |
MS.gene073017.t1 | AT1G66550 | 38.281 | 128 | 66 | 4 | 290 | 415 | 44 | 160 | 5.90e-15 | 75.1 |
MS.gene073017.t1 | AT5G41570 | 41.250 | 80 | 46 | 1 | 338 | 417 | 76 | 154 | 6.10e-15 | 73.2 |
MS.gene073017.t1 | AT2G03340 | 46.479 | 71 | 37 | 1 | 347 | 417 | 402 | 471 | 6.36e-15 | 77.4 |
MS.gene073017.t1 | AT2G03340 | 46.032 | 63 | 31 | 3 | 356 | 417 | 245 | 305 | 7.17e-11 | 64.7 |
MS.gene073017.t1 | AT3G01080 | 51.613 | 62 | 29 | 1 | 356 | 417 | 340 | 400 | 7.72e-15 | 77.0 |
MS.gene073017.t1 | AT3G01080 | 43.529 | 85 | 45 | 3 | 357 | 440 | 201 | 283 | 8.58e-14 | 73.6 |
MS.gene073017.t1 | AT2G40740 | 44.048 | 84 | 43 | 3 | 336 | 415 | 147 | 230 | 1.01e-14 | 75.1 |
MS.gene073017.t1 | AT1G13960 | 46.479 | 71 | 37 | 1 | 347 | 417 | 396 | 465 | 1.03e-14 | 76.6 |
MS.gene073017.t1 | AT3G01080 | 51.613 | 62 | 29 | 1 | 356 | 417 | 302 | 362 | 1.21e-14 | 75.9 |
MS.gene073017.t1 | AT3G01080 | 43.529 | 85 | 45 | 3 | 357 | 440 | 163 | 245 | 1.29e-13 | 72.8 |
MS.gene073017.t1 | AT2G40740 | 44.048 | 84 | 43 | 3 | 336 | 415 | 156 | 239 | 1.57e-14 | 74.7 |
MS.gene073017.t1 | AT1G13960 | 46.479 | 71 | 37 | 1 | 347 | 417 | 243 | 312 | 2.05e-14 | 74.7 |
MS.gene073017.t1 | AT5G56270 | 45.455 | 77 | 41 | 1 | 341 | 417 | 468 | 543 | 2.66e-14 | 75.9 |
MS.gene073017.t1 | AT3G01080 | 43.529 | 85 | 45 | 3 | 357 | 440 | 201 | 283 | 2.84e-14 | 73.9 |
MS.gene073017.t1 | AT1G68150 | 45.333 | 75 | 37 | 1 | 343 | 417 | 222 | 292 | 3.13e-14 | 74.3 |
MS.gene073017.t1 | AT1G18860 | 52.632 | 57 | 27 | 0 | 361 | 417 | 240 | 296 | 3.32e-14 | 75.1 |
MS.gene073017.t1 | AT4G30935 | 51.667 | 60 | 28 | 1 | 358 | 417 | 329 | 387 | 4.38e-14 | 74.7 |
MS.gene073017.t1 | AT4G26440 | 41.237 | 97 | 51 | 2 | 341 | 437 | 353 | 443 | 4.58e-14 | 74.7 |
MS.gene073017.t1 | AT4G26440 | 46.667 | 60 | 29 | 3 | 359 | 417 | 176 | 233 | 7.91e-11 | 64.7 |
MS.gene073017.t1 | AT3G62340 | 42.500 | 80 | 45 | 1 | 338 | 417 | 96 | 174 | 4.95e-14 | 72.8 |
MS.gene073017.t1 | AT2G25000 | 47.368 | 57 | 30 | 0 | 361 | 417 | 104 | 160 | 6.73e-14 | 71.2 |
MS.gene073017.t1 | AT2G25000 | 47.368 | 57 | 30 | 0 | 361 | 417 | 104 | 160 | 6.73e-14 | 71.2 |
MS.gene073017.t1 | AT2G25000 | 47.368 | 57 | 30 | 0 | 361 | 417 | 126 | 182 | 1.12e-13 | 71.2 |
MS.gene073017.t1 | AT2G25000 | 47.368 | 57 | 30 | 0 | 361 | 417 | 147 | 203 | 1.83e-13 | 70.9 |
MS.gene073017.t1 | AT5G64810 | 39.474 | 76 | 45 | 1 | 347 | 422 | 97 | 171 | 3.29e-13 | 68.6 |
MS.gene073017.t1 | AT1G66550 | 38.043 | 92 | 47 | 2 | 334 | 415 | 74 | 165 | 3.51e-13 | 69.7 |
MS.gene073017.t1 | AT5G45260 | 32.692 | 156 | 89 | 7 | 274 | 417 | 1116 | 1267 | 3.69e-13 | 72.4 |
MS.gene073017.t1 | AT1G69310 | 41.860 | 86 | 44 | 3 | 336 | 420 | 122 | 202 | 3.72e-13 | 70.1 |
MS.gene073017.t1 | AT1G80840 | 41.667 | 60 | 35 | 0 | 358 | 417 | 144 | 203 | 5.99e-13 | 69.7 |
MS.gene073017.t1 | AT5G43290 | 42.857 | 77 | 40 | 2 | 342 | 418 | 99 | 171 | 2.64e-12 | 67.4 |
MS.gene073017.t1 | AT1G66560 | 50.847 | 59 | 27 | 1 | 359 | 415 | 102 | 160 | 2.78e-12 | 67.0 |
MS.gene073017.t1 | AT2G46130 | 45.161 | 62 | 33 | 1 | 356 | 417 | 26 | 86 | 4.17e-12 | 63.2 |
MS.gene073017.t1 | AT1G80590 | 44.304 | 79 | 37 | 2 | 361 | 437 | 86 | 159 | 5.44e-12 | 65.9 |
MS.gene073017.t1 | AT1G55600 | 38.961 | 77 | 46 | 1 | 341 | 417 | 288 | 363 | 6.19e-12 | 67.8 |
MS.gene073017.t1 | AT2G21900 | 45.614 | 57 | 30 | 1 | 361 | 417 | 110 | 165 | 8.46e-12 | 64.7 |
MS.gene073017.t1 | AT1G69810 | 36.364 | 99 | 53 | 5 | 344 | 439 | 187 | 278 | 9.57e-12 | 67.0 |
MS.gene073017.t1 | AT1G69810 | 36.364 | 99 | 53 | 5 | 344 | 439 | 129 | 220 | 9.83e-12 | 66.2 |
MS.gene073017.t1 | AT2G30250 | 41.096 | 73 | 40 | 2 | 345 | 417 | 315 | 384 | 2.77e-11 | 65.5 |
MS.gene073017.t1 | AT3G01970 | 33.036 | 112 | 74 | 1 | 306 | 417 | 11 | 121 | 5.77e-11 | 60.8 |
MS.gene073017.t1 | AT5G13080 | 31.897 | 116 | 73 | 3 | 307 | 417 | 9 | 123 | 8.44e-11 | 60.5 |
Find 165 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTTCTAGATCTAAGGATTT+AGG | 0.160577 | 3.4:+94342110 | None:intergenic |
GGATTTAGGGTTAGATTTAA+AGG | 0.234283 | 3.4:+94342124 | None:intergenic |
AGGGAGTGGGAGCATGGATT+TGG | 0.234912 | 3.4:-94340829 | MS.gene073017:CDS |
GGGAGTGGGAGCATGGATTT+GGG | 0.237711 | 3.4:-94340828 | MS.gene073017:CDS |
TACGTTACAACTAGTATATT+TGG | 0.242016 | 3.4:+94340924 | None:intergenic |
CTTGGGGATTTCTAGATCTA+AGG | 0.245293 | 3.4:+94342103 | None:intergenic |
GAAAATGACTTTGAGATTGA+TGG | 0.268812 | 3.4:-94342495 | None:intergenic |
AATAATTCTGGTTCAGGTTC+AGG | 0.270724 | 3.4:-94340849 | MS.gene073017:CDS |
GTATGGCTCCAAACCGATTA+AGG | 0.275343 | 3.4:-94341131 | MS.gene073017:CDS |
TTTATTTCAGGGGTTATTAT+AGG | 0.286785 | 3.4:-94341004 | MS.gene073017:intron |
TTTCTAGATCTAAGGATTTA+GGG | 0.294531 | 3.4:+94342111 | None:intergenic |
AAAGGTTGGTTATGGCTCTT+AGG | 0.300408 | 3.4:+94342173 | None:intergenic |
GGATGTGGTGTTCCCTTAAT+CGG | 0.308127 | 3.4:+94341118 | None:intergenic |
TTAGTAAAATCGAGAGTTAA+AGG | 0.311607 | 3.4:+94342155 | None:intergenic |
CAGAATTATTCTCTTGCATT+GGG | 0.323224 | 3.4:+94340862 | None:intergenic |
CAAGAGAATAATTCTGGTTC+AGG | 0.324630 | 3.4:-94340855 | MS.gene073017:CDS |
AATCACTCCGGCGATGTCTC+TGG | 0.334104 | 3.4:-94341540 | MS.gene073017:CDS |
GTTTGTGGCAGCGGTTGATC+AGG | 0.340156 | 3.4:+94342257 | None:intergenic |
GGAAGCGAGCGTGGCCTTTA+CGG | 0.340610 | 3.4:+94342300 | None:intergenic |
GCCGGTGTAATGGCCGGTGA+TGG | 0.353361 | 3.4:+94341788 | None:intergenic |
ACCCTCACCCCTGCTGTCTC+TGG | 0.371044 | 3.4:-94341609 | MS.gene073017:CDS |
GGAAAACTAAATGTTTCCTT+GGG | 0.371745 | 3.4:+94342086 | None:intergenic |
CCAATGCAAGAGAATAATTC+TGG | 0.372712 | 3.4:-94340861 | MS.gene073017:CDS |
CTGAGTAGAGGTGGAGGGAG+TGG | 0.376016 | 3.4:+94342232 | None:intergenic |
TGGAAAACTAAATGTTTCCT+TGG | 0.386222 | 3.4:+94342085 | None:intergenic |
GAGTATTCATGGAGGAAGTA+TGG | 0.388070 | 3.4:-94341148 | MS.gene073017:CDS |
GGTTGATCAGGGGTTGCATT+TGG | 0.390158 | 3.4:+94342269 | None:intergenic |
CCGGTGTAATGGCCGGTGAT+GGG | 0.391889 | 3.4:+94341789 | None:intergenic |
CGAGAGTTAAAGGTTGGTTA+TGG | 0.401114 | 3.4:+94342165 | None:intergenic |
TGTTTACCACGGGAGATAGA+AGG | 0.401450 | 3.4:+94341717 | None:intergenic |
TGAAGTGGTGGTGGTGGAGG+TGG | 0.402228 | 3.4:+94342209 | None:intergenic |
AAAATTGTCCAGCTAGGAAA+AGG | 0.409042 | 3.4:-94340968 | MS.gene073017:CDS |
TGGTGTTCCCTTAATCGGTT+TGG | 0.409958 | 3.4:+94341123 | None:intergenic |
CCAGAATTATTCTCTTGCAT+TGG | 0.415510 | 3.4:+94340861 | None:intergenic |
GGGTTAGATTTAAAGGTGTA+AGG | 0.415786 | 3.4:+94342131 | None:intergenic |
ATTTGAAGTGGTGGTGGTGG+AGG | 0.418020 | 3.4:+94342206 | None:intergenic |
GGGGTGTTTGAGCTAACCTT+AGG | 0.419189 | 3.4:-94340807 | MS.gene073017:CDS |
GGAGTGGGAGCATGGATTTG+GGG | 0.422889 | 3.4:-94340827 | MS.gene073017:CDS |
CGGTGTAATGGCCGGTGATG+GGG | 0.429599 | 3.4:+94341790 | None:intergenic |
TGGAGGTGGCTGAGTAGAGG+TGG | 0.430349 | 3.4:+94342223 | None:intergenic |
TACCAGCAGATGAGTATTCA+TGG | 0.434617 | 3.4:-94341159 | MS.gene073017:CDS |
GTGGAGGGAGTGGAAGTTTG+TGG | 0.440856 | 3.4:+94342242 | None:intergenic |
CACTGGCTTCGCCGGTGTAA+TGG | 0.443886 | 3.4:+94341778 | None:intergenic |
GAGATAGAAGGGGTGAGGAG+TGG | 0.448554 | 3.4:+94341729 | None:intergenic |
AACACTGCCGTCGCCGGTGA+TGG | 0.454613 | 3.4:+94342046 | None:intergenic |
TAAAATCGAGAGTTAAAGGT+TGG | 0.454643 | 3.4:+94342159 | None:intergenic |
AGAGACATTATTAGCGAAGT+TGG | 0.457022 | 3.4:+94342400 | None:intergenic |
GAAGGGGTGAGGAGTGGAGA+TGG | 0.464492 | 3.4:+94341735 | None:intergenic |
AGGTGGCTGAGTAGAGGTGG+AGG | 0.473021 | 3.4:+94342226 | None:intergenic |
GAGTGGGAGCATGGATTTGG+GGG | 0.475482 | 3.4:-94340826 | MS.gene073017:CDS |
AAAGATGAGTAAGATGTAAG+AGG | 0.475709 | 3.4:+94341693 | None:intergenic |
CTCCATGAATACTCATCTGC+TGG | 0.476195 | 3.4:+94341157 | None:intergenic |
AGAAATGCCACTGCCAGAAA+AGG | 0.476227 | 3.4:-94341500 | MS.gene073017:intron |
CTTGTTCTAATTCCCTCCTA+AGG | 0.478049 | 3.4:+94340791 | None:intergenic |
ATCACTCCGGCGATGTCTCT+GGG | 0.478282 | 3.4:-94341539 | MS.gene073017:CDS |
TGTTTACCACGGGAGACAGC+GGG | 0.481273 | 3.4:+94341846 | None:intergenic |
AACGCTTCTATCGCCGGTGA+TGG | 0.481498 | 3.4:+94341659 | None:intergenic |
CAGGGGTTGCATTTGGATTG+CGG | 0.482525 | 3.4:+94342276 | None:intergenic |
GAGTCCCGTGCATAAGTTCA+AGG | 0.483185 | 3.4:-94341192 | MS.gene073017:CDS |
TTCAATGACGGCGATGAAAG+AGG | 0.483268 | 3.4:+94341576 | None:intergenic |
ATAATTCTGGTTCAGGTTCA+GGG | 0.485370 | 3.4:-94340848 | MS.gene073017:CDS |
CGCCGGTGATGGCGGAGGAT+AGG | 0.488781 | 3.4:+94342057 | None:intergenic |
TTGGGGCTTGATTATGAAGC+TGG | 0.489027 | 3.4:+94340880 | None:intergenic |
TATGGCTCCAAACCGATTAA+GGG | 0.491967 | 3.4:-94341130 | MS.gene073017:CDS |
GGTGTAATGGCCGGTGATGG+GGG | 0.493480 | 3.4:+94341791 | None:intergenic |
GGTTTACCGCTGGAGACAGC+AGG | 0.494929 | 3.4:+94341987 | None:intergenic |
AGTGTTTCCAATGGCAGACT+TGG | 0.497101 | 3.4:-94342029 | MS.gene073017:CDS |
TGGTGGAGGTGGCTGAGTAG+AGG | 0.497676 | 3.4:+94342220 | None:intergenic |
CTGGTTCAGGTTCAGGGAGT+GGG | 0.498298 | 3.4:-94340842 | MS.gene073017:CDS |
GCCTTTACGGTGGAGTAAGT+TGG | 0.499407 | 3.4:+94342313 | None:intergenic |
AGTGTCTCCAATGGCAGGCT+AGG | 0.503100 | 3.4:-94341900 | MS.gene073017:CDS |
AGATGGACCAAGTCTGCCAT+TGG | 0.504301 | 3.4:+94342022 | None:intergenic |
ATTGGAAACACTGGCTTCGC+CGG | 0.506348 | 3.4:+94341770 | None:intergenic |
AGCTAGGAAAAGGGTGGAGA+AGG | 0.508533 | 3.4:-94340958 | MS.gene073017:CDS |
TGAATTTGAAGTGGTGGTGG+TGG | 0.508665 | 3.4:+94342203 | None:intergenic |
GTGGTAGATGGCATTGGACA+TGG | 0.509221 | 3.4:+94341876 | None:intergenic |
TCTGGTTCAGGTTCAGGGAG+TGG | 0.509914 | 3.4:-94340843 | MS.gene073017:CDS |
GTGTTTGAGCTAACCTTAGG+AGG | 0.513166 | 3.4:-94340804 | MS.gene073017:CDS |
GATGACATGAATGATGAGTT+AGG | 0.513463 | 3.4:+94341954 | None:intergenic |
ATAGAAGCGTTTCCAGCGGC+AGG | 0.515749 | 3.4:-94341647 | MS.gene073017:CDS |
GGCTTCGCCGGTGTAATGGC+CGG | 0.516112 | 3.4:+94341782 | None:intergenic |
TTTGTGGCAGCGGTTGATCA+GGG | 0.520203 | 3.4:+94342258 | None:intergenic |
ACATGGACCTAGCCTGCCAT+TGG | 0.522173 | 3.4:+94341893 | None:intergenic |
AGGTTCAGGGAGTGGGAGCA+TGG | 0.522327 | 3.4:-94340835 | MS.gene073017:CDS |
AGATGGACCGATCCTGCCGC+TGG | 0.527015 | 3.4:+94341635 | None:intergenic |
CACCAGAGACAGCAGGGGTG+AGG | 0.529492 | 3.4:+94341607 | None:intergenic |
GCCGTCGCCGGTGATGGCGG+AGG | 0.529845 | 3.4:+94342052 | None:intergenic |
GGAGTGGAAGTTTGTGGCAG+CGG | 0.530182 | 3.4:+94342248 | None:intergenic |
TTCATGTCCTCCGCCATCAC+CGG | 0.530650 | 3.4:-94341672 | MS.gene073017:CDS |
ATTGGAAACACTGCCGTCGC+CGG | 0.530836 | 3.4:+94342040 | None:intergenic |
ACGGCAGTGTCTCCAATGGC+AGG | 0.531858 | 3.4:-94341905 | MS.gene073017:CDS |
GCTGGAAACGCTTCTATCGC+CGG | 0.535199 | 3.4:+94341653 | None:intergenic |
ATCATCAGTCACCTTGGATG+TGG | 0.536621 | 3.4:+94341103 | None:intergenic |
AGCGTTTCCAGCGGCAGGAT+CGG | 0.536745 | 3.4:-94341642 | MS.gene073017:CDS |
CTCCTATCCTCCGCCATCAC+CGG | 0.540008 | 3.4:-94342059 | MS.gene073017:CDS |
ATGGCGGAGGATAGGAGTGA+TGG | 0.540988 | 3.4:+94342065 | None:intergenic |
ACCAGAGACAGCAGGGGTGA+GGG | 0.543631 | 3.4:+94341608 | None:intergenic |
TGAAAGAGGTGGTTTACCGC+TGG | 0.544509 | 3.4:+94341977 | None:intergenic |
CCCATCACCGGCCATTACAC+CGG | 0.545382 | 3.4:-94341789 | MS.gene073017:CDS |
GTTTACCACGGGAGATAGAA+GGG | 0.547446 | 3.4:+94341718 | None:intergenic |
TCTATCGCCGGTGATGGCGG+AGG | 0.548144 | 3.4:+94341665 | None:intergenic |
ATTGGAGACACTGCCGTCGC+CGG | 0.548673 | 3.4:+94341911 | None:intergenic |
AGATGGTACTAGTCTGCCAT+TGG | 0.550295 | 3.4:+94341752 | None:intergenic |
GGTGGCTGAGTAGAGGTGGA+GGG | 0.555049 | 3.4:+94342227 | None:intergenic |
AATGATGAGTTAGGTGAAAG+AGG | 0.558263 | 3.4:+94341963 | None:intergenic |
GATTGCGGCGGAAGCGAGCG+TGG | 0.558913 | 3.4:+94342291 | None:intergenic |
GGAGGAATTTGAATTTGAAG+TGG | 0.561033 | 3.4:+94342194 | None:intergenic |
ACTGCCGTCGCCGGTGATGG+CGG | 0.561235 | 3.4:+94342049 | None:intergenic |
GTTTACCGCTGGAGACAGCA+GGG | 0.565068 | 3.4:+94341988 | None:intergenic |
GGTTTACCACCAGAGACAGC+AGG | 0.565359 | 3.4:+94341600 | None:intergenic |
GGAATTTGAATTTGAAGTGG+TGG | 0.567821 | 3.4:+94342197 | None:intergenic |
TCCTCCGCCATCACCGGCGA+CGG | 0.570163 | 3.4:-94342053 | MS.gene073017:CDS |
ATTTGAATTTGAAGTGGTGG+TGG | 0.570309 | 3.4:+94342200 | None:intergenic |
GCTTCTATCGCCGGTGATGG+CGG | 0.573163 | 3.4:+94341662 | None:intergenic |
GCCGGTGATATCGCGAGCAA+AGG | 0.576295 | 3.4:+94341929 | None:intergenic |
CACGGGAGATAGAAGGGGTG+AGG | 0.577389 | 3.4:+94341724 | None:intergenic |
GGTTGGTTATGGCTCTTAGG+AGG | 0.578662 | 3.4:+94342176 | None:intergenic |
AAATTGTCCAGCTAGGAAAA+GGG | 0.578813 | 3.4:-94340967 | MS.gene073017:CDS |
CTGTTTACCACGGGAGACAG+CGG | 0.579258 | 3.4:+94341845 | None:intergenic |
TCCAACTTACTCCACCGTAA+AGG | 0.584686 | 3.4:-94342314 | MS.gene073017:CDS |
TAGTCTGCCATTGGAAACAC+TGG | 0.587119 | 3.4:+94341761 | None:intergenic |
GTAAGTTGGATAGTTTCTTG+AGG | 0.588388 | 3.4:+94342327 | None:intergenic |
AGCGAGCGTGGCCTTTACGG+TGG | 0.596751 | 3.4:+94342303 | None:intergenic |
TTGTGGCAGCGGTTGATCAG+GGG | 0.597446 | 3.4:+94342259 | None:intergenic |
CTCACCCCTGCTGTCTCTGG+TGG | 0.599307 | 3.4:-94341606 | MS.gene073017:CDS |
GCAGGGGTGAGGGTATAAGA+TGG | 0.600551 | 3.4:+94341618 | None:intergenic |
CAATCCTTGAACTTATGCAC+GGG | 0.601760 | 3.4:+94341188 | None:intergenic |
GCCTTTGCTCGCGATATCAC+CGG | 0.603472 | 3.4:-94341930 | MS.gene073017:CDS |
AATGGTGAGATAGAAGAAAG+AGG | 0.604400 | 3.4:+94341822 | None:intergenic |
GAGGTCTGAAACAGTGATGT+TGG | 0.604494 | 3.4:+94342346 | None:intergenic |
GCAGTGGCATTTCTTAGATG+CGG | 0.605629 | 3.4:+94341509 | None:intergenic |
AGAAAGAGGCTGTTTACCAC+GGG | 0.608993 | 3.4:+94341836 | None:intergenic |
CTCACCCCTGCTGTCTCCAG+CGG | 0.609509 | 3.4:-94341993 | MS.gene073017:CDS |
GCAGGGGTGAGAATTTGAGA+TGG | 0.611517 | 3.4:+94342005 | None:intergenic |
GGCGAAGCCAGTGTTTCCAA+TGG | 0.611891 | 3.4:-94341768 | MS.gene073017:CDS |
TTTACCACGGGAGACAGCGG+GGG | 0.612657 | 3.4:+94341848 | None:intergenic |
GCTCGCGATATCACCGGCGA+CGG | 0.612885 | 3.4:-94341924 | MS.gene073017:CDS |
GTGGCATTTCTTAGATGCGG+AGG | 0.615532 | 3.4:+94341512 | None:intergenic |
GTTTACCACCAGAGACAGCA+GGG | 0.616141 | 3.4:+94341601 | None:intergenic |
TGTAAGAGGCTGTTTACCAC+GGG | 0.617465 | 3.4:+94341707 | None:intergenic |
GGCGACGGCAGTGTCTCCAA+TGG | 0.618204 | 3.4:-94341909 | MS.gene073017:CDS |
AGAATTATTCTCTTGCATTG+GGG | 0.619176 | 3.4:+94340863 | None:intergenic |
GTTTACCACGGGAGACAGCG+GGG | 0.620522 | 3.4:+94341847 | None:intergenic |
GAAAACTAAATGTTTCCTTG+GGG | 0.621149 | 3.4:+94342087 | None:intergenic |
GCAATCCTTGAACTTATGCA+CGG | 0.621816 | 3.4:+94341187 | None:intergenic |
AAGAAAGAGGCTGTTTACCA+CGG | 0.623906 | 3.4:+94341835 | None:intergenic |
ATATTAGAAACTGCCACACA+AGG | 0.629159 | 3.4:-94342437 | MS.gene073017:CDS |
TTAAGGGAACACCACATCCA+AGG | 0.631610 | 3.4:-94341114 | MS.gene073017:intron |
TGTTTGAGCTAACCTTAGGA+GGG | 0.631673 | 3.4:-94340803 | MS.gene073017:CDS |
ATGTAAGAGGCTGTTTACCA+CGG | 0.635354 | 3.4:+94341706 | None:intergenic |
GGCGACGGCAGTGTTTCCAA+TGG | 0.643275 | 3.4:-94342038 | MS.gene073017:CDS |
CTCACCCCTTCTATCTCCCG+TGG | 0.644664 | 3.4:-94341723 | MS.gene073017:CDS |
GATGAGTTAGGTGAAAGAGG+TGG | 0.645788 | 3.4:+94341966 | None:intergenic |
AAAAGCTGTCACAATCACTC+CGG | 0.649448 | 3.4:-94341552 | MS.gene073017:CDS |
TTGTCCAGCTAGGAAAAGGG+TGG | 0.652692 | 3.4:-94340964 | MS.gene073017:CDS |
GGCGATAGAAGCGTTTCCAG+CGG | 0.654727 | 3.4:-94341651 | MS.gene073017:CDS |
AAGTGAGTTTAAGCCTTGTG+TGG | 0.663342 | 3.4:+94342424 | None:intergenic |
CTTAGATCTAGAAATCCCCA+AGG | 0.682048 | 3.4:-94342102 | MS.gene073017:CDS |
GGGTTGCATTTGGATTGCGG+CGG | 0.683767 | 3.4:+94342279 | None:intergenic |
AATGACGGCGATGAAAGAGG+CGG | 0.684940 | 3.4:+94341579 | None:intergenic |
TTTACCACGGGAGATAGAAG+GGG | 0.691554 | 3.4:+94341719 | None:intergenic |
GGGCTTGATTATGAAGCTGG+TGG | 0.693764 | 3.4:+94340883 | None:intergenic |
TTTACCGCTGGAGACAGCAG+GGG | 0.716826 | 3.4:+94341989 | None:intergenic |
TTTACCACCAGAGACAGCAG+GGG | 0.764702 | 3.4:+94341602 | None:intergenic |
CAGCAGATGAGTATTCATGG+AGG | 0.765821 | 3.4:-94341156 | MS.gene073017:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GTTTTGATTTTATTTTTTTT+AGG | - | chr3.4:94342048-94342067 | MS.gene073017:CDS | 10.0% |
!!! | TTATTTTTTTTAGGAAAAAT+CGG | - | chr3.4:94342057-94342076 | MS.gene073017:CDS | 10.0% |
!! | ATTTATTTGAATATGGTAAA+AGG | - | chr3.4:94342224-94342243 | MS.gene073017:CDS | 15.0% |
!! | TAAATGACAAATAAAATATG+CGG | + | chr3.4:94341962-94341981 | None:intergenic | 15.0% |
!!! | TAAATTAATTTTACCTTTTC+TGG | + | chr3.4:94341804-94341823 | None:intergenic | 15.0% |
!! | AAATGACAAATAAAATATGC+GGG | + | chr3.4:94341961-94341980 | None:intergenic | 20.0% |
!! | ACCATATTCAAATAAATCAA+CGG | + | chr3.4:94342221-94342240 | None:intergenic | 20.0% |
!!! | GTTTTGTTTTGTTTATTTCA+GGG | - | chr3.4:94342273-94342292 | MS.gene073017:CDS | 20.0% |
!!! | TGTTTTGTTTTGTTTATTTC+AGG | - | chr3.4:94342272-94342291 | MS.gene073017:CDS | 20.0% |
!!! | TTTTGTTTTGTTTATTTCAG+GGG | - | chr3.4:94342274-94342293 | MS.gene073017:CDS | 20.0% |
! | AATGACAAATAAAATATGCG+GGG | + | chr3.4:94341960-94341979 | None:intergenic | 25.0% |
! | GGTAAAAGGAATGTTTAATA+AGG | - | chr3.4:94342238-94342257 | MS.gene073017:CDS | 25.0% |
! | TACGTTACAACTAGTATATT+TGG | + | chr3.4:94342367-94342386 | None:intergenic | 25.0% |
! | TGTTAATAGTCAACATTCAA+TGG | - | chr3.4:94341835-94341854 | MS.gene073017:CDS | 25.0% |
! | TTAGTAAAATCGAGAGTTAA+AGG | + | chr3.4:94341136-94341155 | None:intergenic | 25.0% |
! | TTTATTTCAGGGGTTATTAT+AGG | - | chr3.4:94342284-94342303 | MS.gene073017:CDS | 25.0% |
! | TTTCTAGATCTAAGGATTTA+GGG | + | chr3.4:94341180-94341199 | None:intergenic | 25.0% |
!! | ATTTCTAGATCTAAGGATTT+AGG | + | chr3.4:94341181-94341200 | None:intergenic | 25.0% |
AAAGATGAGTAAGATGTAAG+AGG | + | chr3.4:94341598-94341617 | None:intergenic | 30.0% | |
AGAATTATTCTCTTGCATTG+GGG | + | chr3.4:94342428-94342447 | None:intergenic | 30.0% | |
CAGAATTATTCTCTTGCATT+GGG | + | chr3.4:94342429-94342448 | None:intergenic | 30.0% | |
GAAAACTAAATGTTTCCTTG+GGG | + | chr3.4:94341204-94341223 | None:intergenic | 30.0% | |
GGAAAACTAAATGTTTCCTT+GGG | + | chr3.4:94341205-94341224 | None:intergenic | 30.0% | |
TAAAATCGAGAGTTAAAGGT+TGG | + | chr3.4:94341132-94341151 | None:intergenic | 30.0% | |
TGGAAAACTAAATGTTTCCT+TGG | + | chr3.4:94341206-94341225 | None:intergenic | 30.0% | |
! | GGATTTAGGGTTAGATTTAA+AGG | + | chr3.4:94341167-94341186 | None:intergenic | 30.0% |
!! | GCCGTTGATTTATTTGAATA+TGG | - | chr3.4:94342217-94342236 | MS.gene073017:CDS | 30.0% |
!! | TTTTTAGGAAAAATCGGAAC+AGG | - | chr3.4:94342063-94342082 | MS.gene073017:CDS | 30.0% |
!!! | ATTGATGGATTTTCCAAACA+TGG | - | chr3.4:94340808-94340827 | MS.gene073017:CDS | 30.0% |
AAAATTGTCCAGCTAGGAAA+AGG | - | chr3.4:94342320-94342339 | MS.gene073017:CDS | 35.0% | |
AAATCAATCATCAGTCACCT+TGG | + | chr3.4:94342194-94342213 | None:intergenic | 35.0% | |
AAATTGTCCAGCTAGGAAAA+GGG | - | chr3.4:94342321-94342340 | MS.gene073017:CDS | 35.0% | |
AATGATGAGTTAGGTGAAAG+AGG | + | chr3.4:94341328-94341347 | None:intergenic | 35.0% | |
AATGGTGAGATAGAAGAAAG+AGG | + | chr3.4:94341469-94341488 | None:intergenic | 35.0% | |
AGAGACATTATTAGCGAAGT+TGG | + | chr3.4:94340891-94340910 | None:intergenic | 35.0% | |
ATATTAGAAACTGCCACACA+AGG | - | chr3.4:94340851-94340870 | MS.gene073017:CDS | 35.0% | |
CATGGATGAGGAAAAAGAAA+AGG | - | chr3.4:94340826-94340845 | MS.gene073017:CDS | 35.0% | |
CCAATGCAAGAGAATAATTC+TGG | - | chr3.4:94342427-94342446 | MS.gene073017:CDS | 35.0% | |
CCAGAATTATTCTCTTGCAT+TGG | + | chr3.4:94342430-94342449 | None:intergenic | 35.0% | |
CGTTTGTCGTAAAAAAGACA+AGG | - | chr3.4:94341906-94341925 | MS.gene073017:CDS | 35.0% | |
GATGACATGAATGATGAGTT+AGG | + | chr3.4:94341337-94341356 | None:intergenic | 35.0% | |
GGAGGAATTTGAATTTGAAG+TGG | + | chr3.4:94341097-94341116 | None:intergenic | 35.0% | |
TAGTCAACATTCAATGGTCA+CGG | - | chr3.4:94341841-94341860 | MS.gene073017:CDS | 35.0% | |
TGTCTAAAAATTGTCCAGCT+AGG | - | chr3.4:94342314-94342333 | MS.gene073017:CDS | 35.0% | |
! | ATTTGAATTTGAAGTGGTGG+TGG | + | chr3.4:94341091-94341110 | None:intergenic | 35.0% |
! | GGAATTTGAATTTGAAGTGG+TGG | + | chr3.4:94341094-94341113 | None:intergenic | 35.0% |
! | GGGTTAGATTTAAAGGTGTA+AGG | + | chr3.4:94341160-94341179 | None:intergenic | 35.0% |
! | GTAAGTTGGATAGTTTCTTG+AGG | + | chr3.4:94340964-94340983 | None:intergenic | 35.0% |
! | TCTTTTTCCTCATCCATGTT+TGG | + | chr3.4:94340824-94340843 | None:intergenic | 35.0% |
! | TGACAGCTTTTCTTCAATGA+CGG | + | chr3.4:94341727-94341746 | None:intergenic | 35.0% |
!! | AATAATTCTGGTTCAGGTTC+AGG | - | chr3.4:94342439-94342458 | MS.gene073017:CDS | 35.0% |
!! | AATTTTACCTTTTCTGGCAG+TGG | + | chr3.4:94341798-94341817 | None:intergenic | 35.0% |
!! | ATAATTCTGGTTCAGGTTCA+GGG | - | chr3.4:94342440-94342459 | MS.gene073017:CDS | 35.0% |
!! | CAAGAGAATAATTCTGGTTC+AGG | - | chr3.4:94342433-94342452 | MS.gene073017:CDS | 35.0% |
!!! | AGTTCAGTGTTTTGAAGAGA+GGG | + | chr3.4:94340920-94340939 | None:intergenic | 35.0% |
AAAAGCTGTCACAATCACTC+CGG | - | chr3.4:94341736-94341755 | MS.gene073017:CDS | 40.0% | |
AAGAAAGAGGCTGTTTACCA+CGG | + | chr3.4:94341456-94341475 | None:intergenic | 40.0% | |
ATGTAAGAGGCTGTTTACCA+CGG | + | chr3.4:94341585-94341604 | None:intergenic | 40.0% | |
CAATCCTTGAACTTATGCAC+GGG | + | chr3.4:94342103-94342122 | None:intergenic | 40.0% | |
CTTAGATCTAGAAATCCCCA+AGG | - | chr3.4:94341186-94341205 | MS.gene073017:CDS | 40.0% | |
GAGTATTCATGGAGGAAGTA+TGG | - | chr3.4:94342140-94342159 | MS.gene073017:CDS | 40.0% | |
GCAATCCTTGAACTTATGCA+CGG | + | chr3.4:94342104-94342123 | None:intergenic | 40.0% | |
TACCAGCAGATGAGTATTCA+TGG | - | chr3.4:94342129-94342148 | MS.gene073017:CDS | 40.0% | |
TATGGCTCCAAACCGATTAA+GGG | - | chr3.4:94342158-94342177 | MS.gene073017:CDS | 40.0% | |
TGTTTGAGCTAACCTTAGGA+GGG | - | chr3.4:94342485-94342504 | MS.gene073017:CDS | 40.0% | |
! | AAAGGTTGGTTATGGCTCTT+AGG | + | chr3.4:94341118-94341137 | None:intergenic | 40.0% |
! | AAGTGAGTTTAAGCCTTGTG+TGG | + | chr3.4:94340867-94340886 | None:intergenic | 40.0% |
! | CGAGAGTTAAAGGTTGGTTA+TGG | + | chr3.4:94341126-94341145 | None:intergenic | 40.0% |
! | CTTGGGGATTTCTAGATCTA+AGG | + | chr3.4:94341188-94341207 | None:intergenic | 40.0% |
! | GGATTTTCCAAACATGGATG+AGG | - | chr3.4:94340814-94340833 | MS.gene073017:CDS | 40.0% |
!!! | AGTGTTTTGAAGAGAGGGTT+GGG | + | chr3.4:94340915-94340934 | None:intergenic | 40.0% |
!!! | GAGTTCAGTGTTTTGAAGAG+AGG | + | chr3.4:94340921-94340940 | None:intergenic | 40.0% |
AGAAAGAGGCTGTTTACCAC+GGG | + | chr3.4:94341455-94341474 | None:intergenic | 45.0% | |
AGAAATGCCACTGCCAGAAA+AGG | - | chr3.4:94341788-94341807 | MS.gene073017:CDS | 45.0% | |
AGTGTTTCCAATGGCAGACT+TGG | - | chr3.4:94341259-94341278 | MS.gene073017:intron | 45.0% | |
ATCATCAGTCACCTTGGATG+TGG | + | chr3.4:94342188-94342207 | None:intergenic | 45.0% | |
CAGCAGATGAGTATTCATGG+AGG | - | chr3.4:94342132-94342151 | MS.gene073017:CDS | 45.0% | |
CTCCATGAATACTCATCTGC+TGG | + | chr3.4:94342134-94342153 | None:intergenic | 45.0% | |
GATGAGTTAGGTGAAAGAGG+TGG | + | chr3.4:94341325-94341344 | None:intergenic | 45.0% | |
GCAGTGGCATTTCTTAGATG+CGG | + | chr3.4:94341782-94341801 | None:intergenic | 45.0% | |
GGATGTGGTGTTCCCTTAAT+CGG | + | chr3.4:94342173-94342192 | None:intergenic | 45.0% | |
GTATGGCTCCAAACCGATTA+AGG | - | chr3.4:94342157-94342176 | MS.gene073017:CDS | 45.0% | |
GTGTTTGAGCTAACCTTAGG+AGG | - | chr3.4:94342484-94342503 | MS.gene073017:CDS | 45.0% | |
GTTTACCACGGGAGATAGAA+GGG | + | chr3.4:94341573-94341592 | None:intergenic | 45.0% | |
TAGTCTGCCATTGGAAACAC+TGG | + | chr3.4:94341530-94341549 | None:intergenic | 45.0% | |
TCCAACTTACTCCACCGTAA+AGG | - | chr3.4:94340974-94340993 | MS.gene073017:CDS | 45.0% | |
TGGTGTTCCCTTAATCGGTT+TGG | + | chr3.4:94342168-94342187 | None:intergenic | 45.0% | |
TGTAAGAGGCTGTTTACCAC+GGG | + | chr3.4:94341584-94341603 | None:intergenic | 45.0% | |
TGTTTACCACGGGAGATAGA+AGG | + | chr3.4:94341574-94341593 | None:intergenic | 45.0% | |
TTAAGGGAACACCACATCCA+AGG | - | chr3.4:94342174-94342193 | MS.gene073017:CDS | 45.0% | |
TTCAATGACGGCGATGAAAG+AGG | + | chr3.4:94341715-94341734 | None:intergenic | 45.0% | |
TTGGGGCTTGATTATGAAGC+TGG | + | chr3.4:94342411-94342430 | None:intergenic | 45.0% | |
TTTACCACGGGAGATAGAAG+GGG | + | chr3.4:94341572-94341591 | None:intergenic | 45.0% | |
! | AGATGGTACTAGTCTGCCAT+TGG | + | chr3.4:94341539-94341558 | None:intergenic | 45.0% |
! | GAGGTCTGAAACAGTGATGT+TGG | + | chr3.4:94340945-94340964 | None:intergenic | 45.0% |
!! | TGAATTTGAAGTGGTGGTGG+TGG | + | chr3.4:94341088-94341107 | None:intergenic | 45.0% |
!!! | CAGTGTTTTGAAGAGAGGGT+TGG | + | chr3.4:94340916-94340935 | None:intergenic | 45.0% |
!!! | GTGTTTTGAAGAGAGGGTTG+GGG | + | chr3.4:94340914-94340933 | None:intergenic | 45.0% |
AATGACGGCGATGAAAGAGG+CGG | + | chr3.4:94341712-94341731 | None:intergenic | 50.0% | |
AGATGGACCAAGTCTGCCAT+TGG | + | chr3.4:94341269-94341288 | None:intergenic | 50.0% | |
AGCTAGGAAAAGGGTGGAGA+AGG | - | chr3.4:94342330-94342349 | MS.gene073017:CDS | 50.0% | |
CAGGGGTTGCATTTGGATTG+CGG | + | chr3.4:94341015-94341034 | None:intergenic | 50.0% | |
GAGTCCCGTGCATAAGTTCA+AGG | - | chr3.4:94342096-94342115 | MS.gene073017:CDS | 50.0% | |
GCAGGGGTGAGAATTTGAGA+TGG | + | chr3.4:94341286-94341305 | None:intergenic | 50.0% | |
GCCTTTACGGTGGAGTAAGT+TGG | + | chr3.4:94340978-94340997 | None:intergenic | 50.0% | |
GGGCTTGATTATGAAGCTGG+TGG | + | chr3.4:94342408-94342427 | None:intergenic | 50.0% | |
GGTTGATCAGGGGTTGCATT+TGG | + | chr3.4:94341022-94341041 | None:intergenic | 50.0% | |
GTGGCATTTCTTAGATGCGG+AGG | + | chr3.4:94341779-94341798 | None:intergenic | 50.0% | |
GTTTACCACCAGAGACAGCA+GGG | + | chr3.4:94341690-94341709 | None:intergenic | 50.0% | |
TGAAAGAGGTGGTTTACCGC+TGG | + | chr3.4:94341314-94341333 | None:intergenic | 50.0% | |
TTGTCCAGCTAGGAAAAGGG+TGG | - | chr3.4:94342324-94342343 | MS.gene073017:CDS | 50.0% | |
TTTACCACCAGAGACAGCAG+GGG | + | chr3.4:94341689-94341708 | None:intergenic | 50.0% | |
TTTGTGGCAGCGGTTGATCA+GGG | + | chr3.4:94341033-94341052 | None:intergenic | 50.0% | |
! | GGGGTGTTTGAGCTAACCTT+AGG | - | chr3.4:94342481-94342500 | MS.gene073017:CDS | 50.0% |
! | GGTTGGTTATGGCTCTTAGG+AGG | + | chr3.4:94341115-94341134 | None:intergenic | 50.0% |
! | GTGGTAGATGGCATTGGACA+TGG | + | chr3.4:94341415-94341434 | None:intergenic | 50.0% |
! | TTCTCCACCCTTTTCCTAGC+TGG | + | chr3.4:94342331-94342350 | None:intergenic | 50.0% |
!! | ATTGGAAACACTGGCTTCGC+CGG | + | chr3.4:94341521-94341540 | None:intergenic | 50.0% |
!! | ATTTGAAGTGGTGGTGGTGG+AGG | + | chr3.4:94341085-94341104 | None:intergenic | 50.0% |
AACGCTTCTATCGCCGGTGA+TGG | + | chr3.4:94341632-94341651 | None:intergenic | 55.0% | |
AATCACTCCGGCGATGTCTC+TGG | - | chr3.4:94341748-94341767 | MS.gene073017:CDS | 55.0% | |
ACATGGACCTAGCCTGCCAT+TGG | + | chr3.4:94341398-94341417 | None:intergenic | 55.0% | |
AGTGTCTCCAATGGCAGGCT+AGG | - | chr3.4:94341388-94341407 | MS.gene073017:intron | 55.0% | |
ATCACTCCGGCGATGTCTCT+GGG | - | chr3.4:94341749-94341768 | MS.gene073017:CDS | 55.0% | |
ATTGGAAACACTGCCGTCGC+CGG | + | chr3.4:94341251-94341270 | None:intergenic | 55.0% | |
CTGTTTACCACGGGAGACAG+CGG | + | chr3.4:94341446-94341465 | None:intergenic | 55.0% | |
GAGATAGAAGGGGTGAGGAG+TGG | + | chr3.4:94341562-94341581 | None:intergenic | 55.0% | |
GCCTTTGCTCGCGATATCAC+CGG | - | chr3.4:94341358-94341377 | MS.gene073017:intron | 55.0% | |
GCTGGAAACGCTTCTATCGC+CGG | + | chr3.4:94341638-94341657 | None:intergenic | 55.0% | |
GGAGTGGAAGTTTGTGGCAG+CGG | + | chr3.4:94341043-94341062 | None:intergenic | 55.0% | |
GGCGAAGCCAGTGTTTCCAA+TGG | - | chr3.4:94341520-94341539 | MS.gene073017:CDS | 55.0% | |
GGGTTGCATTTGGATTGCGG+CGG | + | chr3.4:94341012-94341031 | None:intergenic | 55.0% | |
GGTTTACCACCAGAGACAGC+AGG | + | chr3.4:94341691-94341710 | None:intergenic | 55.0% | |
GTGGAGGGAGTGGAAGTTTG+TGG | + | chr3.4:94341049-94341068 | None:intergenic | 55.0% | |
GTTTACCGCTGGAGACAGCA+GGG | + | chr3.4:94341303-94341322 | None:intergenic | 55.0% | |
GTTTGTGGCAGCGGTTGATC+AGG | + | chr3.4:94341034-94341053 | None:intergenic | 55.0% | |
TGTTTACCACGGGAGACAGC+GGG | + | chr3.4:94341445-94341464 | None:intergenic | 55.0% | |
TTCATGTCCTCCCCCATCAC+CGG | - | chr3.4:94341487-94341506 | MS.gene073017:intron | 55.0% | |
TTCATGTCCTCCGCCATCAC+CGG | - | chr3.4:94341616-94341635 | MS.gene073017:CDS | 55.0% | |
TTGTGGCAGCGGTTGATCAG+GGG | + | chr3.4:94341032-94341051 | None:intergenic | 55.0% | |
TTTACCGCTGGAGACAGCAG+GGG | + | chr3.4:94341302-94341321 | None:intergenic | 55.0% | |
! | AGGGAGTGGGAGCATGGATT+TGG | - | chr3.4:94342459-94342478 | MS.gene073017:CDS | 55.0% |
! | ATGGCGGAGGATAGGAGTGA+TGG | + | chr3.4:94341226-94341245 | None:intergenic | 55.0% |
! | CTGGTTCAGGTTCAGGGAGT+GGG | - | chr3.4:94342446-94342465 | MS.gene073017:CDS | 55.0% |
! | GAGTGGGAGCATGGATTTGG+GGG | - | chr3.4:94342462-94342481 | MS.gene073017:CDS | 55.0% |
! | GCAGGGGTGAGGGTATAAGA+TGG | + | chr3.4:94341673-94341692 | None:intergenic | 55.0% |
! | GGAGTGGGAGCATGGATTTG+GGG | - | chr3.4:94342461-94342480 | MS.gene073017:CDS | 55.0% |
! | GGGAGTGGGAGCATGGATTT+GGG | - | chr3.4:94342460-94342479 | MS.gene073017:CDS | 55.0% |
! | GGTTTTCCCAGAGACATCGC+CGG | + | chr3.4:94341758-94341777 | None:intergenic | 55.0% |
! | GTGATGGGGGAGGACATGAA+TGG | + | chr3.4:94341487-94341506 | None:intergenic | 55.0% |
! | TCTGGTTCAGGTTCAGGGAG+TGG | - | chr3.4:94342445-94342464 | MS.gene073017:CDS | 55.0% |
!! | ATAGAAGCGTTTCCAGCGGC+AGG | - | chr3.4:94341641-94341660 | MS.gene073017:CDS | 55.0% |
!! | GGCGATAGAAGCGTTTCCAG+CGG | - | chr3.4:94341637-94341656 | MS.gene073017:CDS | 55.0% |
ACCAGAGACAGCAGGGGTGA+GGG | + | chr3.4:94341683-94341702 | None:intergenic | 60.0% | |
ACGGCAGTGTCTCCAATGGC+AGG | - | chr3.4:94341383-94341402 | MS.gene073017:intron | 60.0% | |
AGCGTTTCCAGCGGCAGGAT+CGG | - | chr3.4:94341646-94341665 | MS.gene073017:CDS | 60.0% | |
AGGTGGCTGAGTAGAGGTGG+AGG | + | chr3.4:94341065-94341084 | None:intergenic | 60.0% | |
AGGTTCAGGGAGTGGGAGCA+TGG | - | chr3.4:94342453-94342472 | MS.gene073017:CDS | 60.0% | |
ATTGGAGACACTGCCGTCGC+CGG | + | chr3.4:94341380-94341399 | None:intergenic | 60.0% | |
CACGGGAGATAGAAGGGGTG+AGG | + | chr3.4:94341567-94341586 | None:intergenic | 60.0% | |
CCCATCACCGGCCATTACAC+CGG | - | chr3.4:94341499-94341518 | MS.gene073017:intron | 60.0% | |
CCGGTGTAATGGCCGGTGAT+GGG | + | chr3.4:94341502-94341521 | None:intergenic | 60.0% | |
CGGTGTAATGGCCGGTGATG+GGG | + | chr3.4:94341501-94341520 | None:intergenic | 60.0% | |
CTCACCCCTTCTATCTCCCG+TGG | - | chr3.4:94341565-94341584 | MS.gene073017:CDS | 60.0% | |
CTCCTATCCTCCGCCATCAC+CGG | - | chr3.4:94341229-94341248 | MS.gene073017:intron | 60.0% | |
CTGAGTAGAGGTGGAGGGAG+TGG | + | chr3.4:94341059-94341078 | None:intergenic | 60.0% | |
GAAGGGGTGAGGAGTGGAGA+TGG | + | chr3.4:94341556-94341575 | None:intergenic | 60.0% | |
GCCGGTGATATCGCGAGCAA+AGG | + | chr3.4:94341362-94341381 | None:intergenic | 60.0% | |
GGAAGCGAGCGTGGCCTTTA+CGG | + | chr3.4:94340991-94341010 | None:intergenic | 60.0% | |
GGCGACGGCAGTGTTTCCAA+TGG | - | chr3.4:94341250-94341269 | MS.gene073017:intron | 60.0% | |
GGTGGCTGAGTAGAGGTGGA+GGG | + | chr3.4:94341064-94341083 | None:intergenic | 60.0% | |
GGTTTACCGCTGGAGACAGC+AGG | + | chr3.4:94341304-94341323 | None:intergenic | 60.0% | |
GTGGGGGTGGTAGATGGCAT+TGG | + | chr3.4:94341421-94341440 | None:intergenic | 60.0% | |
GTTTACCACGGGAGACAGCG+GGG | + | chr3.4:94341444-94341463 | None:intergenic | 60.0% | |
TGGAGGTGGCTGAGTAGAGG+TGG | + | chr3.4:94341068-94341087 | None:intergenic | 60.0% | |
TGGTGGAGGTGGCTGAGTAG+AGG | + | chr3.4:94341071-94341090 | None:intergenic | 60.0% | |
TTTACCACGGGAGACAGCGG+GGG | + | chr3.4:94341443-94341462 | None:intergenic | 60.0% | |
! | GCTTCTATCGCCGGTGATGG+CGG | + | chr3.4:94341629-94341648 | None:intergenic | 60.0% |
! | GGTGTAATGGCCGGTGATGG+GGG | + | chr3.4:94341500-94341519 | None:intergenic | 60.0% |
!! | CACTGGCTTCGCCGGTGTAA+TGG | + | chr3.4:94341513-94341532 | None:intergenic | 60.0% |
!! | TGAAGTGGTGGTGGTGGAGG+TGG | + | chr3.4:94341082-94341101 | None:intergenic | 60.0% |
AACACTGCCGTCGCCGGTGA+TGG | + | chr3.4:94341245-94341264 | None:intergenic | 65.0% | |
ACCCTCACCCCTGCTGTCTC+TGG | - | chr3.4:94341679-94341698 | MS.gene073017:CDS | 65.0% | |
AGATGGACCGATCCTGCCGC+TGG | + | chr3.4:94341656-94341675 | None:intergenic | 65.0% | |
AGCGAGCGTGGCCTTTACGG+TGG | + | chr3.4:94340988-94341007 | None:intergenic | 65.0% | |
CACCAGAGACAGCAGGGGTG+AGG | + | chr3.4:94341684-94341703 | None:intergenic | 65.0% | |
CTCACCCCTGCTGTCTCCAG+CGG | - | chr3.4:94341295-94341314 | MS.gene073017:intron | 65.0% | |
CTCACCCCTGCTGTCTCTGG+TGG | - | chr3.4:94341682-94341701 | MS.gene073017:CDS | 65.0% | |
GCCGGTGTAATGGCCGGTGA+TGG | + | chr3.4:94341503-94341522 | None:intergenic | 65.0% | |
GCTCGCGATATCACCGGCGA+CGG | - | chr3.4:94341364-94341383 | MS.gene073017:intron | 65.0% | |
GGCGACGGCAGTGTCTCCAA+TGG | - | chr3.4:94341379-94341398 | MS.gene073017:intron | 65.0% | |
GGCTTCGCCGGTGTAATGGC+CGG | + | chr3.4:94341509-94341528 | None:intergenic | 65.0% | |
!! | GTAATGGCCGGTGATGGGGG+AGG | + | chr3.4:94341497-94341516 | None:intergenic | 65.0% |
!! | TCTATCGCCGGTGATGGCGG+AGG | + | chr3.4:94341626-94341645 | None:intergenic | 65.0% |
GATTGCGGCGGAAGCGAGCG+TGG | + | chr3.4:94341000-94341019 | None:intergenic | 70.0% | |
TCCTCCGCCATCACCGGCGA+CGG | - | chr3.4:94341235-94341254 | MS.gene073017:intron | 70.0% | |
! | ACTGCCGTCGCCGGTGATGG+CGG | + | chr3.4:94341242-94341261 | None:intergenic | 70.0% |
!! | CGCCGGTGATGGCGGAGGAT+AGG | + | chr3.4:94341234-94341253 | None:intergenic | 70.0% |
ACCACGGGAGACAGCGGGGG+TGG | + | chr3.4:94341440-94341459 | None:intergenic | 75.0% | |
ACGGGAGACAGCGGGGGTGG+GGG | + | chr3.4:94341437-94341456 | None:intergenic | 75.0% | |
CACGGGAGACAGCGGGGGTG+GGG | + | chr3.4:94341438-94341457 | None:intergenic | 75.0% | |
CCACGGGAGACAGCGGGGGT+GGG | + | chr3.4:94341439-94341458 | None:intergenic | 75.0% | |
GCGGGGGTGGGGGTGGTAGA+TGG | + | chr3.4:94341427-94341446 | None:intergenic | 75.0% | |
! | CCCACCCCCGCTGTCTCCCG+TGG | - | chr3.4:94341436-94341455 | MS.gene073017:intron | 80.0% |
! | GGAGACAGCGGGGGTGGGGG+TGG | + | chr3.4:94341434-94341453 | None:intergenic | 80.0% |
!!! | GCCGTCGCCGGTGATGGCGG+AGG | + | chr3.4:94341239-94341258 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 94340797 | 94342513 | 94340797 | ID=MS.gene073017 |
chr3.4 | mRNA | 94340797 | 94342513 | 94340797 | ID=MS.gene073017.t1;Parent=MS.gene073017 |
chr3.4 | exon | 94341501 | 94342513 | 94341501 | ID=MS.gene073017.t1.exon1;Parent=MS.gene073017.t1 |
chr3.4 | CDS | 94341501 | 94342513 | 94341501 | ID=cds.MS.gene073017.t1;Parent=MS.gene073017.t1 |
chr3.4 | exon | 94341115 | 94341240 | 94341115 | ID=MS.gene073017.t1.exon2;Parent=MS.gene073017.t1 |
chr3.4 | CDS | 94341115 | 94341240 | 94341115 | ID=cds.MS.gene073017.t1;Parent=MS.gene073017.t1 |
chr3.4 | exon | 94340797 | 94341016 | 94340797 | ID=MS.gene073017.t1.exon3;Parent=MS.gene073017.t1 |
chr3.4 | CDS | 94340797 | 94341016 | 94340797 | ID=cds.MS.gene073017.t1;Parent=MS.gene073017.t1 |
Gene Sequence |
Protein sequence |