AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene07333

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07333.t1 MTR_1g086510 89.630 270 12 5 1 259 1 265 2.88e-159 442
MS.gene07333.t1 MTR_1g086530 54.475 257 90 7 15 250 26 276 1.56e-84 254
MS.gene07333.t1 MTR_1g110460 55.080 187 72 2 8 184 14 198 3.89e-66 208
MS.gene07333.t1 MTR_2g033170 71.942 139 29 1 17 145 19 157 3.92e-64 203
MS.gene07333.t1 MTR_4g123040 69.718 142 33 1 14 145 16 157 7.53e-64 202
MS.gene07333.t1 MTR_7g035075 64.167 120 33 1 9 118 1 120 1.17e-51 167
MS.gene07333.t1 MTR_6g006030 69.444 108 23 1 22 119 14 121 3.64e-51 166
MS.gene07333.t1 MTR_1g045610 59.836 122 38 2 6 117 6 126 4.97e-45 152
MS.gene07333.t1 MTR_1g073170 63.810 105 28 1 23 117 21 125 1.65e-43 148
MS.gene07333.t1 MTR_5g029840 45.763 177 75 4 12 169 2 176 4.71e-41 144
MS.gene07333.t1 MTR_8g027345 57.983 119 38 2 19 125 9 127 3.56e-40 140
MS.gene07333.t1 MTR_4g125520 60.345 116 33 2 15 120 8 120 1.06e-39 140
MS.gene07333.t1 MTR_5g007370 54.622 119 44 1 14 122 4 122 1.39e-39 139
MS.gene07333.t1 MTR_3g074520 51.429 140 57 2 12 141 2 140 8.88e-39 138
MS.gene07333.t1 MTR_4g478180 53.719 121 46 1 12 122 3 123 1.58e-38 138
MS.gene07333.t1 MTR_4g063100 57.407 108 36 1 23 120 8 115 2.13e-38 135
MS.gene07333.t1 MTR_7g117730 58.182 110 36 1 18 117 8 117 1.53e-37 132
MS.gene07333.t1 MTR_5g078140 53.043 115 44 1 18 122 8 122 1.67e-37 134
MS.gene07333.t1 MTR_3g065440 53.043 115 44 1 18 122 8 122 2.11e-37 134
MS.gene07333.t1 MTR_1g043080 58.095 105 34 1 21 115 11 115 4.43e-37 131
MS.gene07333.t1 MTR_4g121460 63.725 102 27 1 21 112 11 112 4.64e-37 134
MS.gene07333.t1 MTR_2g096380 55.046 109 39 1 22 120 6 114 4.91e-37 131
MS.gene07333.t1 MTR_3g052450 52.252 111 43 1 18 118 36 146 4.99e-37 137
MS.gene07333.t1 MTR_2g011660 54.310 116 43 1 17 122 8 123 6.46e-37 133
MS.gene07333.t1 MTR_4g102380 53.913 115 43 1 18 122 8 122 6.94e-37 131
MS.gene07333.t1 MTR_1g076150 53.390 118 45 1 21 128 11 128 7.31e-37 131
MS.gene07333.t1 MTR_7g076740 51.240 121 48 1 18 127 8 128 8.38e-37 132
MS.gene07333.t1 MTR_3g052430 54.206 107 39 1 22 118 41 147 1.42e-36 135
MS.gene07333.t1 MTR_2g089620 55.556 108 38 1 18 115 8 115 1.45e-36 132
MS.gene07333.t1 MTR_4g091490 53.448 116 44 1 17 122 8 123 1.52e-36 132
MS.gene07333.t1 MTR_3g011610 56.604 106 36 1 22 117 37 142 2.19e-36 135
MS.gene07333.t1 MTR_2g034790 38.428 229 99 7 19 217 9 225 2.46e-36 131
MS.gene07333.t1 MTR_1g100653 55.556 108 38 1 21 118 11 118 5.23e-36 130
MS.gene07333.t1 MTR_7g011170 52.893 121 47 1 12 122 2 122 5.95e-36 130
MS.gene07333.t1 MTR_6g012690 50.758 132 54 2 12 132 2 133 7.25e-36 131
MS.gene07333.t1 MTR_7g096930 55.556 108 38 1 21 118 11 118 7.92e-36 129
MS.gene07333.t1 MTR_1g043050 57.143 105 35 1 21 115 11 115 8.71e-36 128
MS.gene07333.t1 MTR_0251s0050 47.761 134 51 2 17 131 8 141 1.01e-35 128
MS.gene07333.t1 MTR_2g089420 43.750 176 71 4 21 168 10 185 1.54e-35 132
MS.gene07333.t1 MTR_0008s0390 53.636 110 41 1 17 116 8 117 2.03e-35 127
MS.gene07333.t1 MTR_3g097450 59.804 102 31 1 24 115 14 115 2.88e-35 128
MS.gene07333.t1 MTR_1g062940 57.547 106 35 1 22 117 6 111 3.37e-35 125
MS.gene07333.t1 MTR_8g031360 44.521 146 55 2 17 151 8 138 3.67e-35 127
MS.gene07333.t1 MTR_8g098860 54.054 111 41 1 18 118 8 118 3.89e-35 128
MS.gene07333.t1 MTR_0008s0470 55.140 107 38 1 20 116 11 117 7.32e-35 127
MS.gene07333.t1 MTR_7g115650 51.852 108 42 1 21 118 11 118 8.89e-35 124
MS.gene07333.t1 MTR_1g085040 53.448 116 44 1 22 127 12 127 1.11e-34 128
MS.gene07333.t1 MTR_3g083540 57.009 107 36 1 19 115 38 144 1.45e-34 126
MS.gene07333.t1 MTR_7g010210 45.638 149 61 3 21 149 11 159 2.39e-34 126
MS.gene07333.t1 MTR_4g100720 52.066 121 45 2 10 120 4 121 2.46e-34 122
MS.gene07333.t1 MTR_2g089450 54.206 107 39 1 18 114 8 114 2.58e-34 124
MS.gene07333.t1 MTR_8g017440 50.877 114 46 1 12 115 2 115 2.83e-34 126
MS.gene07333.t1 MTR_8g042410 52.830 106 40 1 22 117 37 142 2.88e-34 129
MS.gene07333.t1 MTR_7g010210 44.737 152 64 3 18 149 8 159 3.94e-34 124
MS.gene07333.t1 MTR_5g079670 46.923 130 56 2 9 128 1 127 4.31e-34 122
MS.gene07333.t1 MTR_5g010020 54.128 109 40 1 12 110 2 110 4.54e-34 125
MS.gene07333.t1 MTR_2g064160 51.923 104 40 1 22 115 11 114 5.53e-34 125
MS.gene07333.t1 MTR_1g112760 35.096 208 122 3 22 219 13 217 6.54e-34 122
MS.gene07333.t1 MTR_4g082290 49.206 126 54 1 12 127 2 127 6.57e-34 127
MS.gene07333.t1 MTR_1g100667 52.137 117 46 1 23 129 14 130 7.77e-34 123
MS.gene07333.t1 MTR_4g073420 58.824 102 32 1 24 115 14 115 9.78e-34 124
MS.gene07333.t1 MTR_2g099740 49.123 114 48 1 12 115 2 115 1.09e-33 126
MS.gene07333.t1 MTR_2g097910 53.704 108 40 1 22 119 20 127 2.20e-33 123
MS.gene07333.t1 MTR_4g485530 52.679 112 43 1 24 125 14 125 2.52e-33 120
MS.gene07333.t1 MTR_4g063100 68.421 76 24 0 45 120 11 86 4.07e-33 120
MS.gene07333.t1 MTR_1g017000 49.524 105 42 1 22 115 12 116 4.46e-33 121
MS.gene07333.t1 MTR_8g017540 49.123 114 48 1 12 115 48 161 5.01e-33 124
MS.gene07333.t1 MTR_3g039990 52.294 109 42 1 21 119 12 120 5.82e-33 122
MS.gene07333.t1 MTR_8g095390 52.632 114 44 1 24 127 14 127 5.86e-33 122
MS.gene07333.t1 MTR_8g020490 54.286 105 38 1 24 118 10 114 6.78e-33 120
MS.gene07333.t1 MTR_3g077110 54.808 104 37 1 22 115 12 115 7.00e-33 123
MS.gene07333.t1 MTR_6g012180 57.000 100 33 1 21 110 11 110 8.89e-33 122
MS.gene07333.t1 MTR_8g017390 48.696 115 48 1 12 115 2 116 1.47e-32 124
MS.gene07333.t1 MTR_3g028740 49.606 127 52 2 1 117 3 127 1.56e-32 122
MS.gene07333.t1 MTR_0063s0090 36.410 195 99 5 18 196 8 193 1.62e-32 119
MS.gene07333.t1 MTR_7g110830 51.240 121 48 2 22 131 12 132 1.63e-32 122
MS.gene07333.t1 MTR_1g021230 52.830 106 40 1 22 117 57 162 1.68e-32 123
MS.gene07333.t1 MTR_8g017500 45.968 124 57 1 18 131 8 131 1.72e-32 122
MS.gene07333.t1 MTR_0008s0280 50.000 110 45 1 18 117 8 117 1.91e-32 119
MS.gene07333.t1 MTR_7g087130 45.802 131 52 2 19 130 9 139 2.22e-32 121
MS.gene07333.t1 MTR_7g111290 54.310 116 43 1 22 127 12 127 2.22e-32 122
MS.gene07333.t1 MTR_4g082230 50.862 116 47 1 22 127 12 127 2.32e-32 122
MS.gene07333.t1 MTR_4g065017 48.062 129 52 2 1 119 1 124 3.02e-32 120
MS.gene07333.t1 MTR_0140s0030 53.333 105 39 1 21 115 12 116 3.17e-32 120
MS.gene07333.t1 MTR_0489s0020 53.333 105 39 1 21 115 12 116 3.17e-32 120
MS.gene07333.t1 MTR_4g057635 39.884 173 77 4 18 166 8 177 4.37e-32 120
MS.gene07333.t1 MTR_6g055910 44.737 152 58 4 14 155 6 141 6.49e-32 119
MS.gene07333.t1 MTR_1g085640 50.413 121 49 2 22 131 12 132 1.23e-31 120
MS.gene07333.t1 MTR_8g017350 49.524 105 42 1 22 115 12 116 2.65e-31 122
MS.gene07333.t1 MTR_4g105130 41.935 155 73 4 22 163 12 162 2.77e-31 119
MS.gene07333.t1 MTR_8g017340 49.524 105 42 1 22 115 12 116 2.85e-31 120
MS.gene07333.t1 MTR_2g067420 48.649 111 47 1 11 111 3 113 3.79e-31 118
MS.gene07333.t1 MTR_2g088170 49.074 108 45 1 20 117 27 134 6.50e-31 119
MS.gene07333.t1 MTR_2g096380 62.195 82 31 0 39 120 14 95 7.15e-31 114
MS.gene07333.t1 MTR_5g042030 49.107 112 47 1 21 122 6 117 1.30e-30 115
MS.gene07333.t1 MTR_2g095520 50.000 110 44 1 12 110 2 111 1.37e-30 116
MS.gene07333.t1 MTR_3g461490 45.600 125 57 2 22 135 12 136 1.72e-30 116
MS.gene07333.t1 MTR_7g109320 51.786 112 44 1 19 120 9 120 1.87e-30 116
MS.gene07333.t1 MTR_1g017140 49.541 109 44 1 18 115 8 116 1.22e-29 114
MS.gene07333.t1 MTR_3g103570 49.541 109 44 1 18 115 8 116 2.00e-29 114
MS.gene07333.t1 MTR_1g083630 50.943 106 42 1 22 117 12 117 2.13e-29 116
MS.gene07333.t1 MTR_6g009430 45.217 115 53 1 18 122 8 122 3.10e-29 113
MS.gene07333.t1 MTR_5g014990 48.624 109 45 1 18 115 8 116 3.58e-29 112
MS.gene07333.t1 MTR_5g079120 47.934 121 53 1 17 127 56 176 4.21e-29 112
MS.gene07333.t1 MTR_6g090405 46.087 115 51 1 12 115 2 116 1.74e-28 109
MS.gene07333.t1 MTR_7g102110 43.651 126 60 1 12 126 2 127 2.08e-28 109
MS.gene07333.t1 MTR_4g128670 50.000 104 41 1 18 110 8 111 3.03e-28 110
MS.gene07333.t1 MTR_8g006470 41.379 116 57 2 15 119 3 118 3.22e-28 109
MS.gene07333.t1 MTR_7g017260 45.000 120 54 1 9 116 12 131 4.32e-28 108
MS.gene07333.t1 MTR_8g060940 51.887 106 41 1 17 112 2 107 7.40e-28 107
MS.gene07333.t1 MTR_0247s0040 52.381 105 40 1 18 112 3 107 1.01e-27 105
MS.gene07333.t1 MTR_4g097570 47.222 108 46 1 12 108 2 109 2.14e-27 107
MS.gene07333.t1 MTR_4g097570 46.789 109 46 1 12 108 2 110 2.80e-27 107
MS.gene07333.t1 MTR_5g078800 50.000 110 45 1 17 116 2 111 7.30e-27 105
MS.gene07333.t1 MTR_0197s0010 47.748 111 48 1 27 127 6 116 1.25e-26 103
MS.gene07333.t1 MTR_5g079290 47.826 115 50 1 11 115 6 120 1.85e-26 103
MS.gene07333.t1 MTR_6g055910 49.107 112 41 3 44 155 17 112 2.97e-26 103
MS.gene07333.t1 MTR_0001s0360 50.000 106 43 1 21 116 6 111 5.86e-26 102
MS.gene07333.t1 MTR_4g128190 41.667 120 66 2 14 132 3 119 1.23e-25 101
MS.gene07333.t1 MTR_7g111290 59.036 83 34 0 45 127 3 85 1.61e-25 103
MS.gene07333.t1 MTR_0193s0090 48.598 107 45 1 18 114 3 109 1.79e-25 100
MS.gene07333.t1 MTR_5g078860 49.091 110 46 1 17 116 2 111 1.88e-25 102
MS.gene07333.t1 MTR_5g078910 47.273 110 48 1 17 116 2 111 2.11e-25 102
MS.gene07333.t1 MTR_5g079220 49.524 105 43 1 21 115 20 124 2.75e-25 101
MS.gene07333.t1 MTR_5g088080 44.037 109 50 2 20 117 10 118 3.44e-25 100
MS.gene07333.t1 MTR_5g088150 44.037 109 50 2 20 117 10 118 3.44e-25 100
MS.gene07333.t1 MTR_5g488210 44.037 109 50 2 20 117 10 118 3.44e-25 100
MS.gene07333.t1 MTR_5g088640 44.037 109 50 2 20 117 10 118 4.00e-25 100
MS.gene07333.t1 MTR_5g488170 44.037 109 50 2 20 117 10 118 5.83e-25 99.8
MS.gene07333.t1 MTR_5g078950 47.170 106 46 1 17 112 2 107 1.99e-24 98.6
MS.gene07333.t1 MTR_4g029540 41.667 108 51 3 16 111 3 110 2.70e-24 99.0
MS.gene07333.t1 MTR_5g062790 45.000 100 44 2 23 111 10 109 2.72e-24 99.4
MS.gene07333.t1 MTR_5g078930 44.444 126 56 2 17 128 4 129 5.59e-23 94.0
MS.gene07333.t1 MTR_5g088610 44.340 106 48 2 23 117 10 115 5.80e-23 96.3
MS.gene07333.t1 MTR_3g045430 38.168 131 70 2 13 132 4 134 6.51e-23 95.5
MS.gene07333.t1 MTR_5g049190 39.640 111 54 2 9 108 4 112 2.18e-22 92.8
MS.gene07333.t1 MTR_3g101290 45.098 102 47 1 24 116 37 138 5.12e-22 91.3
MS.gene07333.t1 MTR_4g019370 46.939 98 43 2 24 112 38 135 3.43e-21 91.3
MS.gene07333.t1 MTR_5g016510 41.667 108 54 1 24 122 5 112 9.37e-21 89.7
MS.gene07333.t1 MTR_5g007300 51.250 80 29 1 19 88 61 140 2.29e-20 84.7
MS.gene07333.t1 MTR_7g061330 40.777 103 52 1 22 115 111 213 2.54e-20 90.1
MS.gene07333.t1 MTR_7g461410 40.777 103 52 1 22 115 111 213 2.54e-20 90.1
MS.gene07333.t1 MTR_5g070020 36.800 125 70 1 14 129 112 236 2.60e-20 89.0
MS.gene07333.t1 MTR_7g061330 40.777 103 52 1 22 115 75 177 5.01e-20 89.4
MS.gene07333.t1 MTR_6g015455 40.870 115 59 1 24 129 5 119 6.60e-20 89.4
MS.gene07333.t1 MTR_6g027360 36.719 128 71 3 9 127 64 190 8.32e-20 87.0
MS.gene07333.t1 MTR_3g110028 39.806 103 53 1 22 115 83 185 1.53e-19 88.2
MS.gene07333.t1 MTR_6g027340 35.938 128 72 3 9 127 2 128 1.65e-19 84.3
MS.gene07333.t1 MTR_1g057980 31.183 186 115 5 8 183 64 246 3.51e-19 85.1
MS.gene07333.t1 MTR_4g105660 35.461 141 80 3 19 150 175 313 4.13e-19 86.3
MS.gene07333.t1 MTR_7g450950 32.258 155 87 4 10 150 138 288 6.43e-19 85.1
MS.gene07333.t1 MTR_1g085880 41.667 120 56 4 14 121 3 120 7.35e-19 82.0
MS.gene07333.t1 MTR_3g077650 40.566 106 54 2 24 120 181 286 8.45e-19 85.5
MS.gene07333.t1 MTR_7g037260 33.094 139 80 2 8 135 129 265 8.77e-19 84.7
MS.gene07333.t1 MTR_5g041570 36.975 119 62 3 13 118 119 237 1.23e-18 85.1
MS.gene07333.t1 MTR_6g074860 42.000 100 49 2 24 114 4 103 1.76e-18 82.4
MS.gene07333.t1 MTR_1g026870 36.893 103 56 1 22 115 83 185 1.78e-18 85.1
MS.gene07333.t1 MTR_3g463400 39.815 108 56 2 22 120 131 238 1.85e-18 84.7
MS.gene07333.t1 MTR_4g094982 39.048 105 55 1 24 119 5 109 2.00e-18 82.8
MS.gene07333.t1 MTR_1g085770 41.667 120 56 4 14 121 3 120 2.56e-18 82.8
MS.gene07333.t1 MTR_5g082910 44.681 94 43 1 24 108 19 112 1.29e-17 80.9
MS.gene07333.t1 MTR_4g082040 37.288 118 61 3 14 118 91 208 1.33e-17 82.0
MS.gene07333.t1 MTR_4g088015 34.959 123 67 2 24 135 221 341 3.01e-17 80.9
MS.gene07333.t1 MTR_7g061550 35.455 110 59 1 27 124 10 119 3.88e-17 80.1
MS.gene07333.t1 MTR_4g063100 64.706 51 18 0 70 120 1 51 4.66e-17 77.4
MS.gene07333.t1 MTR_7g451170 34.677 124 68 2 8 120 175 296 6.04e-17 80.1
MS.gene07333.t1 MTR_3g089045 35.156 128 74 2 14 132 6 133 2.71e-16 77.0
MS.gene07333.t1 MTR_2g096380 62.745 51 19 0 70 120 1 51 3.96e-16 74.3
MS.gene07333.t1 MTR_6g027370 40.230 87 48 1 41 127 129 211 5.56e-16 76.6
MS.gene07333.t1 MTR_5g038910 39.000 100 52 1 27 117 29 128 7.31e-16 77.0
MS.gene07333.t1 MTR_5g038910 39.000 100 52 1 27 117 29 128 1.01e-15 76.3
MS.gene07333.t1 MTR_7g035350 39.785 93 47 1 27 110 228 320 1.46e-15 76.3
MS.gene07333.t1 MTR_7g086960 41.379 87 48 2 37 123 113 196 2.23e-15 75.1
MS.gene07333.t1 MTR_5g010650 38.542 96 50 1 22 108 108 203 2.73e-14 72.4
MS.gene07333.t1 MTR_7g037130 32.258 124 69 3 8 118 129 250 2.36e-13 69.3
MS.gene07333.t1 MTR_8g468380 35.088 114 62 2 27 131 25 135 4.46e-13 68.9
MS.gene07333.t1 MTR_6g055910 41.860 86 34 3 70 155 2 71 8.90e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07333.t1 AT2G47190 46.209 277 100 10 5 248 3 263 2.99e-70 217
MS.gene07333.t1 AT1G48000 68.750 144 35 1 22 155 32 175 4.05e-70 216
MS.gene07333.t1 AT5G49620 65.385 156 44 1 2 147 6 161 2.37e-64 203
MS.gene07333.t1 AT3G06490 68.000 150 34 2 10 145 3 152 1.20e-62 199
MS.gene07333.t1 AT1G68320 66.418 134 35 1 22 145 19 152 2.76e-61 195
MS.gene07333.t1 AT5G49620 60.000 170 44 2 2 147 6 175 1.15e-60 194
MS.gene07333.t1 AT1G25340 47.534 223 84 6 18 213 12 228 4.17e-60 192
MS.gene07333.t1 AT1G25340 65.185 135 40 2 18 145 12 146 1.77e-59 190
MS.gene07333.t1 AT1G25340 48.165 218 85 6 18 213 12 223 4.64e-59 190
MS.gene07333.t1 AT3G27810 67.273 110 26 1 19 118 17 126 6.12e-51 166
MS.gene07333.t1 AT5G40350 51.553 161 60 4 22 166 17 175 7.78e-50 163
MS.gene07333.t1 AT3G01530 65.789 114 29 1 14 117 17 130 2.73e-49 161
MS.gene07333.t1 AT3G24310 62.385 109 31 1 19 117 15 123 3.20e-44 150
MS.gene07333.t1 AT3G30210 64.486 107 28 1 21 117 26 132 3.60e-43 148
MS.gene07333.t1 AT4G13480 62.857 105 29 1 23 117 7 111 6.00e-43 147
MS.gene07333.t1 AT3G27810 78.378 74 16 0 45 118 4 77 2.24e-40 137
MS.gene07333.t1 AT3G46130 56.034 116 41 1 19 124 6 121 2.27e-40 140
MS.gene07333.t1 AT5G65230 52.344 128 51 1 12 129 2 129 3.47e-40 141
MS.gene07333.t1 AT5G16770 41.463 205 104 4 12 203 2 203 4.25e-40 141
MS.gene07333.t1 AT5G16770 41.463 205 104 4 12 203 2 203 4.25e-40 141
MS.gene07333.t1 AT5G16770 41.463 205 104 4 12 203 2 203 6.22e-40 141
MS.gene07333.t1 AT5G16770 41.463 205 104 4 12 203 2 203 6.22e-40 141
MS.gene07333.t1 AT3G02940 55.372 121 44 1 12 122 2 122 7.45e-40 140
MS.gene07333.t1 AT5G59780 57.407 108 36 1 23 120 9 116 1.38e-39 137
MS.gene07333.t1 AT3G02940 55.372 121 44 1 12 122 2 122 1.39e-39 140
MS.gene07333.t1 AT3G02940 55.372 121 44 1 12 122 2 122 1.39e-39 140
MS.gene07333.t1 AT5G40350 52.344 128 53 3 45 166 5 130 7.22e-39 134
MS.gene07333.t1 AT1G34670 50.714 140 58 2 12 141 2 140 1.18e-38 138
MS.gene07333.t1 AT4G05100 55.172 116 42 1 17 122 8 123 1.64e-38 137
MS.gene07333.t1 AT3G23250 39.109 202 79 5 21 206 11 184 3.03e-38 135
MS.gene07333.t1 AT5G62320 51.538 130 46 1 18 130 9 138 5.33e-38 134
MS.gene07333.t1 AT1G06180 53.390 118 45 1 21 128 11 128 2.19e-37 132
MS.gene07333.t1 AT1G66230 53.043 115 44 1 18 122 8 122 2.37e-37 133
MS.gene07333.t1 AT3G01140 51.163 129 53 1 12 130 2 130 3.72e-37 134
MS.gene07333.t1 AT5G54230 34.363 259 119 7 22 237 12 262 5.35e-37 133
MS.gene07333.t1 AT5G10280 52.066 121 48 1 12 122 2 122 5.82e-37 133
MS.gene07333.t1 AT4G28110 53.509 114 43 1 12 115 2 115 8.02e-37 132
MS.gene07333.t1 AT3G01140 55.652 115 41 1 18 122 51 165 1.30e-36 134
MS.gene07333.t1 AT4G21440 54.386 114 42 1 19 122 9 122 1.39e-36 132
MS.gene07333.t1 AT4G12350 40.104 192 88 5 22 203 12 186 2.01e-36 130
MS.gene07333.t1 AT5G15310 52.893 121 47 1 12 122 2 122 2.04e-36 129
MS.gene07333.t1 AT2G31180 57.143 105 35 1 21 115 11 115 2.15e-36 129
MS.gene07333.t1 AT1G22640 52.756 127 50 1 12 128 2 128 2.28e-36 130
MS.gene07333.t1 AT5G14750 43.373 166 79 4 8 161 4 166 2.35e-36 128
MS.gene07333.t1 AT5G14340 46.715 137 63 1 8 134 10 146 2.59e-36 130
MS.gene07333.t1 AT3G13540 45.752 153 70 3 9 151 10 159 3.33e-36 129
MS.gene07333.t1 AT5G16600 51.304 115 46 1 18 122 8 122 4.05e-36 131
MS.gene07333.t1 AT5G15310 52.893 121 47 1 12 122 2 122 4.65e-36 130
MS.gene07333.t1 AT5G15310 52.893 121 47 1 12 122 2 122 4.85e-36 130
MS.gene07333.t1 AT3G11440 47.059 119 53 1 9 117 28 146 7.63e-36 133
MS.gene07333.t1 AT4G22680 50.000 120 50 1 18 127 8 127 7.64e-36 129
MS.gene07333.t1 AT5G06100 52.336 107 41 1 21 117 31 137 1.38e-35 132
MS.gene07333.t1 AT3G47600 52.991 117 43 2 18 122 8 124 2.32e-35 129
MS.gene07333.t1 AT4G26930 49.593 123 49 2 9 118 3 125 3.01e-35 130
MS.gene07333.t1 AT5G40330 54.955 111 38 2 15 115 7 115 3.37e-35 125
MS.gene07333.t1 AT3G11440 47.059 119 53 1 9 117 28 146 3.59e-35 132
MS.gene07333.t1 AT3G11440 47.059 119 53 1 9 117 28 146 3.59e-35 132
MS.gene07333.t1 AT3G11440 47.059 119 53 1 9 117 28 146 3.59e-35 132
MS.gene07333.t1 AT5G06100 52.336 107 41 1 21 117 31 137 4.87e-35 131
MS.gene07333.t1 AT5G06100 52.336 107 41 1 21 117 31 137 4.87e-35 131
MS.gene07333.t1 AT5G06100 52.336 107 41 1 21 117 31 137 4.87e-35 131
MS.gene07333.t1 AT5G06100 52.336 107 41 1 21 117 31 137 4.87e-35 131
MS.gene07333.t1 AT5G07690 55.769 104 36 1 21 114 11 114 6.73e-35 128
MS.gene07333.t1 AT3G53200 56.075 107 37 1 19 115 6 112 7.16e-35 125
MS.gene07333.t1 AT2G32460 52.336 107 41 1 21 117 17 123 7.44e-35 130
MS.gene07333.t1 AT4G34990 59.804 102 31 1 24 115 14 115 7.63e-35 126
MS.gene07333.t1 AT2G32460 52.336 107 41 1 21 117 5 111 8.27e-35 130
MS.gene07333.t1 AT5G07700 54.286 105 38 1 21 115 11 115 1.92e-34 127
MS.gene07333.t1 AT5G07700 54.286 105 38 1 21 115 11 115 1.92e-34 127
MS.gene07333.t1 AT2G47460 56.075 107 37 1 19 115 9 115 2.03e-34 127
MS.gene07333.t1 AT4G17785 50.407 123 51 1 17 129 8 130 2.52e-34 127
MS.gene07333.t1 AT1G35515 57.692 104 34 1 22 115 12 115 2.53e-34 123
MS.gene07333.t1 AT5G60890 39.773 176 94 3 19 182 9 184 2.62e-34 125
MS.gene07333.t1 AT4G17785 50.407 123 51 1 17 129 8 130 2.69e-34 127
MS.gene07333.t1 AT5G49330 58.095 105 34 1 21 115 11 115 2.83e-34 126
MS.gene07333.t1 AT5G61420 54.286 105 38 1 21 115 11 115 3.54e-34 127
MS.gene07333.t1 AT4G38620 59.804 102 31 1 24 115 14 115 4.07e-34 124
MS.gene07333.t1 AT3G27920 54.545 110 39 2 16 115 9 117 4.34e-34 123
MS.gene07333.t1 AT1G09540 44.966 149 57 2 22 160 12 145 5.90e-34 126
MS.gene07333.t1 AT1G18570 56.075 107 37 1 19 115 10 116 6.14e-34 125
MS.gene07333.t1 AT1G79180 50.000 118 49 1 11 118 3 120 6.15e-34 124
MS.gene07333.t1 AT5G62470 54.128 109 40 1 21 119 11 119 6.20e-34 125
MS.gene07333.t1 AT1G63910 50.427 117 48 1 12 118 2 118 7.39e-34 126
MS.gene07333.t1 AT3G13890 49.123 114 48 1 12 115 2 115 8.26e-34 125
MS.gene07333.t1 AT4G09460 59.804 102 31 1 24 115 14 115 8.57e-34 122
MS.gene07333.t1 AT3G61250 49.167 120 51 1 18 127 8 127 8.73e-34 124
MS.gene07333.t1 AT1G57560 56.731 104 35 1 22 115 12 115 9.00e-34 124
MS.gene07333.t1 AT3G62610 55.140 107 38 1 19 115 9 115 9.72e-34 125
MS.gene07333.t1 AT1G57560 56.731 104 35 1 22 115 12 115 1.05e-33 123
MS.gene07333.t1 AT2G16720 58.654 104 33 1 22 115 12 115 1.15e-33 123
MS.gene07333.t1 AT1G16490 49.565 115 48 1 11 115 3 117 1.88e-33 122
MS.gene07333.t1 AT5G35550 52.308 130 44 3 22 133 14 143 2.46e-33 122
MS.gene07333.t1 AT3G46130 60.674 89 35 0 36 124 1 89 2.80e-33 121
MS.gene07333.t1 AT5G26660 53.153 111 42 1 22 122 12 122 4.41e-33 123
MS.gene07333.t1 AT3G13890 46.341 123 47 1 12 115 2 124 6.91e-33 123
MS.gene07333.t1 AT5G52600 51.351 111 44 1 16 116 6 116 1.01e-32 119
MS.gene07333.t1 AT1G08810 50.000 116 48 1 21 126 11 126 1.64e-32 120
MS.gene07333.t1 AT3G12720 50.962 104 41 1 22 115 22 125 1.98e-32 120
MS.gene07333.t1 AT3G08500 47.368 133 54 2 1 117 3 135 2.18e-32 121
MS.gene07333.t1 AT5G59780 67.105 76 25 0 45 120 20 95 2.49e-32 118
MS.gene07333.t1 AT3G28910 51.786 112 44 1 21 122 11 122 3.72e-32 120
MS.gene07333.t1 AT3G46130 65.000 80 28 0 45 124 20 99 4.41e-32 118
MS.gene07333.t1 AT5G62470 53.704 108 41 1 21 119 11 118 4.90e-32 120
MS.gene07333.t1 AT1G56160 48.696 115 49 1 11 115 3 117 6.73e-32 119
MS.gene07333.t1 AT5G12870 50.926 108 43 1 22 119 18 125 7.95e-32 118
MS.gene07333.t1 AT2G26960 43.609 133 62 3 10 130 6 137 7.96e-32 121
MS.gene07333.t1 AT5G23000 50.459 109 43 1 18 115 8 116 8.31e-32 119
MS.gene07333.t1 AT1G74650 52.294 109 42 1 22 120 12 120 1.08e-31 119
MS.gene07333.t1 AT5G55020 51.402 107 42 1 22 118 26 132 1.31e-31 122
MS.gene07333.t1 AT4G37780 49.541 109 44 1 18 115 8 116 2.24e-31 118
MS.gene07333.t1 AT1G74080 52.885 104 39 1 21 114 11 114 4.14e-31 118
MS.gene07333.t1 AT4G01680 53.774 106 39 1 22 117 12 117 7.48e-31 115
MS.gene07333.t1 AT4G01680 53.774 106 39 1 22 117 12 117 1.09e-30 117
MS.gene07333.t1 AT2G36890 50.459 109 43 1 18 115 8 116 2.96e-30 115
MS.gene07333.t1 AT1G74430 53.333 105 39 1 21 115 11 115 3.57e-30 114
MS.gene07333.t1 AT5G56110 45.802 131 57 3 16 135 9 136 4.15e-30 115
MS.gene07333.t1 AT1G66370 37.500 208 96 5 17 202 3 198 5.34e-30 113
MS.gene07333.t1 AT2G36890 50.459 109 43 1 18 115 49 157 5.40e-30 115
MS.gene07333.t1 AT5G65790 50.459 109 43 1 18 115 8 116 5.54e-30 115
MS.gene07333.t1 AT5G57620 49.541 109 44 1 18 115 8 116 6.18e-30 115
MS.gene07333.t1 AT1G79180 39.735 151 48 1 11 118 3 153 8.08e-30 114
MS.gene07333.t1 AT5G52260 50.000 116 44 2 23 124 13 128 1.89e-29 112
MS.gene07333.t1 AT4G25560 51.456 103 40 1 23 115 11 113 3.03e-29 112
MS.gene07333.t1 AT3G28470 48.544 103 43 1 18 110 8 110 4.43e-29 112
MS.gene07333.t1 AT3G53200 59.756 82 30 1 34 115 1 79 4.67e-29 109
MS.gene07333.t1 AT3G49690 48.624 109 45 1 18 115 8 116 6.29e-29 111
MS.gene07333.t1 AT3G48920 44.538 119 56 1 6 114 2 120 7.79e-29 110
MS.gene07333.t1 AT4G01680 48.305 118 39 1 22 117 12 129 8.24e-29 112
MS.gene07333.t1 AT3G12820 48.148 108 46 1 18 115 10 117 1.67e-28 108
MS.gene07333.t1 AT1G18710 49.524 105 43 1 21 115 11 115 2.95e-27 106
MS.gene07333.t1 AT5G26660 57.692 78 33 0 45 122 14 91 3.35e-26 104
MS.gene07333.t1 AT5G35550 52.427 103 41 2 39 133 44 146 3.95e-26 103
MS.gene07333.t1 AT3G60460 41.379 116 55 3 15 119 6 119 7.95e-26 103
MS.gene07333.t1 AT3G47600 57.500 80 32 1 45 122 39 118 1.03e-25 103
MS.gene07333.t1 AT5G14750 63.235 68 25 0 48 115 18 85 1.82e-25 99.0
MS.gene07333.t1 AT1G56650 46.377 138 58 4 13 140 3 134 3.55e-25 100
MS.gene07333.t1 AT1G66380 52.381 105 40 1 21 115 7 111 6.76e-25 96.7
MS.gene07333.t1 AT3G12820 61.765 68 26 0 48 115 2 69 1.45e-24 97.4
MS.gene07333.t1 AT1G66390 51.327 113 41 2 13 115 3 111 5.66e-24 97.4
MS.gene07333.t1 AT2G26950 41.748 103 50 1 22 114 16 118 1.94e-23 98.2
MS.gene07333.t1 AT5G11050 33.166 199 110 5 24 200 105 302 2.62e-21 92.4
MS.gene07333.t1 AT3G27785 37.500 128 64 2 24 135 189 316 3.97e-21 92.0
MS.gene07333.t1 AT3G09370 40.000 105 54 1 22 117 128 232 1.63e-20 90.9
MS.gene07333.t1 AT3G09370 40.000 105 54 1 22 117 133 237 1.75e-20 90.5
MS.gene07333.t1 AT3G09370 40.000 105 54 1 22 117 141 245 2.09e-20 90.5
MS.gene07333.t1 AT5G02320 41.748 103 51 1 22 115 125 227 2.13e-20 90.5
MS.gene07333.t1 AT5G02320 41.748 103 51 1 22 115 125 227 2.13e-20 90.5
MS.gene07333.t1 AT3G23250 34.194 155 68 4 58 206 1 127 2.31e-20 87.0
MS.gene07333.t1 AT4G18770 38.596 114 57 2 19 121 212 323 2.49e-20 89.7
MS.gene07333.t1 AT2G23290 43.137 102 49 1 24 116 13 114 3.60e-20 88.2
MS.gene07333.t1 AT5G02320 41.748 103 51 1 22 115 65 167 4.26e-20 89.4
MS.gene07333.t1 AT5G58850 37.931 116 63 1 14 120 95 210 1.34e-19 87.8
MS.gene07333.t1 AT1G69560 27.155 232 134 7 12 213 98 324 2.10e-19 86.3
MS.gene07333.t1 AT1G69560 27.155 232 134 7 12 213 114 340 2.31e-19 86.3
MS.gene07333.t1 AT1G22640 54.930 71 32 0 58 128 1 71 2.45e-19 83.6
MS.gene07333.t1 AT5G11510 40.777 103 52 1 22 115 79 181 4.91e-19 86.7
MS.gene07333.t1 AT5G11510 40.777 103 52 1 22 115 79 181 4.91e-19 86.7
MS.gene07333.t1 AT5G11510 40.777 103 52 1 22 115 79 181 4.91e-19 86.7
MS.gene07333.t1 AT5G11510 40.777 103 52 1 22 115 79 181 5.60e-19 86.7
MS.gene07333.t1 AT5G11510 40.777 103 52 1 22 115 79 181 6.33e-19 86.3
MS.gene07333.t1 AT4G37260 41.284 109 50 2 24 123 13 116 7.45e-19 84.7
MS.gene07333.t1 AT3G55730 40.000 105 54 2 24 119 56 160 1.06e-18 85.1
MS.gene07333.t1 AT3G09230 44.898 98 37 2 24 108 55 148 2.12e-18 84.0
MS.gene07333.t1 AT2G39880 40.385 104 53 2 24 118 50 153 3.36e-18 83.2
MS.gene07333.t1 AT5G59780 66.667 51 17 0 70 120 1 51 3.89e-18 79.7
MS.gene07333.t1 AT4G32730 36.893 103 56 1 22 115 85 187 4.34e-18 84.0
MS.gene07333.t1 AT4G32730 36.893 103 56 1 22 115 85 187 4.34e-18 84.0
MS.gene07333.t1 AT4G32730 36.893 103 56 1 22 115 85 187 4.34e-18 84.0
MS.gene07333.t1 AT4G32730 36.893 103 56 1 22 115 85 187 4.34e-18 84.0
MS.gene07333.t1 AT4G32730 36.893 103 56 1 22 115 85 187 4.69e-18 84.0
MS.gene07333.t1 AT1G66380 57.746 71 30 0 45 115 8 78 4.86e-18 77.8
MS.gene07333.t1 AT5G14750 58.621 58 24 0 58 115 1 58 5.62e-18 78.6
MS.gene07333.t1 AT5G14750 58.621 58 24 0 58 115 1 58 5.62e-18 78.6
MS.gene07333.t1 AT1G26780 38.679 106 56 2 22 118 96 201 6.67e-18 82.4
MS.gene07333.t1 AT3G46130 63.636 55 20 0 70 124 1 55 6.78e-18 79.7
MS.gene07333.t1 AT1G26780 38.679 106 56 2 22 118 96 201 7.39e-18 81.3
MS.gene07333.t1 AT3G29020 35.577 104 58 2 24 118 65 168 1.15e-17 80.1
MS.gene07333.t1 AT1G18960 36.975 119 63 4 24 132 10 126 1.47e-17 80.9
MS.gene07333.t1 AT3G29020 35.577 104 58 2 24 118 67 170 2.20e-17 80.5
MS.gene07333.t1 AT1G73410 41.346 104 52 2 24 118 6 109 6.64e-17 78.2
MS.gene07333.t1 AT5G17800 32.540 126 76 1 2 118 71 196 1.07e-16 78.6
MS.gene07333.t1 AT1G73410 41.346 104 52 2 24 118 6 109 1.22e-16 76.6
MS.gene07333.t1 AT5G67300 39.216 102 53 1 24 116 6 107 1.26e-16 78.2
MS.gene07333.t1 AT1G14350 36.364 132 72 3 27 146 28 159 1.64e-16 79.0
MS.gene07333.t1 AT1G14350 36.364 132 72 3 27 146 28 159 1.64e-16 79.0
MS.gene07333.t1 AT1G17950 47.887 71 37 0 48 118 38 108 3.39e-16 76.3
MS.gene07333.t1 AT1G71030 44.872 78 43 0 51 128 5 82 3.99e-16 74.7
MS.gene07333.t1 AT1G71030 44.872 78 43 0 51 128 19 96 4.43e-16 74.7
MS.gene07333.t1 AT3G50060 41.489 94 46 1 24 108 6 99 5.22e-16 76.3
MS.gene07333.t1 AT2G37630 35.849 106 56 1 27 120 7 112 1.39e-15 75.9
MS.gene07333.t1 AT4G00540 34.454 119 66 1 19 125 98 216 1.65e-15 75.9
MS.gene07333.t1 AT4G00540 34.454 119 66 1 19 125 96 214 2.26e-15 75.5
MS.gene07333.t1 AT5G40360 37.234 94 50 1 24 108 158 251 2.69e-15 75.1
MS.gene07333.t1 AT5G39700 36.066 122 64 4 16 125 48 167 6.41e-15 71.6
MS.gene07333.t1 AT4G33450 36.275 102 63 1 37 138 43 142 8.44e-15 72.4
MS.gene07333.t1 AT2G25230 44.444 63 35 0 48 110 59 121 2.01e-14 70.9
MS.gene07333.t1 AT2G02820 35.000 120 61 2 27 129 33 152 2.89e-14 72.4
MS.gene07333.t1 AT2G02820 35.000 120 61 2 27 129 33 152 3.25e-14 72.4
MS.gene07333.t1 AT2G02820 35.000 120 61 2 27 129 33 152 3.41e-14 71.6
MS.gene07333.t1 AT1G66380 49.367 79 30 1 21 89 7 85 2.88e-13 65.1
MS.gene07333.t1 AT5G40430 32.673 101 56 2 20 110 50 148 2.28e-12 65.5
MS.gene07333.t1 AT4G25560 56.522 46 20 0 70 115 2 47 1.02e-11 63.2

Find 63 sgRNAs with CRISPR-Local

Find 81 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGAGGTATGGATATTATTA+AGG 0.274881 1.4:+69016639 MS.gene07333:CDS
GCTGAATTTGTTCGAGCAAT+CGG 0.324431 1.4:-69017403 None:intergenic
TTCTTGACCTCCACTCTCGC+TGG 0.343930 1.4:+69017023 MS.gene07333:CDS
ACATTGCAAAGTTCAGTTTC+AGG 0.345402 1.4:+69017488 MS.gene07333:CDS
GAAAATTGCACAACATCTTC+CGG 0.351207 1.4:+69017259 MS.gene07333:CDS
CCGTTTGGATTATTCGTGTC+GGG 0.362353 1.4:-69017440 None:intergenic
ATTCCAAGTTGCTTCAAATT+CGG 0.364516 1.4:+69017547 MS.gene07333:CDS
CAACAACCAGGTTTCAGAAC+AGG 0.368209 1.4:+69017628 MS.gene07333:CDS
ATTTCATTGTCTGTTCTTCC+CGG 0.372727 1.4:-69017278 None:intergenic
CTGAATTTGTTCGAGCAATC+GGG 0.374768 1.4:-69017402 None:intergenic
AGAAGGATATTTGATCCGTT+TGG 0.402041 1.4:-69017455 None:intergenic
GTGGTAAAAGTTGCAGATTA+AGG 0.427674 1.4:+69016936 MS.gene07333:CDS
TCCACTCTCGCTGGGGCAAT+AGG 0.434932 1.4:+69017032 MS.gene07333:CDS
ATTAGAAGAGGACACCATTC+TGG 0.442186 1.4:+69016720 MS.gene07333:CDS
AAAATTGCACAACATCTTCC+GGG 0.442714 1.4:+69017260 MS.gene07333:CDS
ATATTCCCGCGGCGTACATC+GGG 0.454217 1.4:-69016977 None:intergenic
TCTTCCCCTGTTCTGAAACC+TGG 0.458600 1.4:-69017634 None:intergenic
TCTTGACCTCCACTCTCGCT+GGG 0.459839 1.4:+69017024 MS.gene07333:CDS
TGTCCGAATTTGAAGCAACT+TGG 0.462924 1.4:-69017550 None:intergenic
GATATTCCCGCGGCGTACAT+CGG 0.477058 1.4:-69016978 None:intergenic
TCAGAACAGGGGAAGAGTAC+TGG 0.492420 1.4:+69017641 MS.gene07333:CDS
CAGGGTTAAGAAAAGGTCCT+TGG 0.492516 1.4:+69016695 MS.gene07333:CDS
ATTATTAAGGTTCAGAAAGG+TGG 0.498662 1.4:+69016652 MS.gene07333:CDS
TAATTAATTATACAGGTTTG+AGG 0.498751 1.4:+69016909 MS.gene07333:intron
AGGAATCAGTGGTGTTTCCT+CGG 0.499809 1.4:+69017508 MS.gene07333:CDS
AATGAGACAGGGTTAAGAAA+AGG 0.510276 1.4:+69016688 MS.gene07333:CDS
TCTGCAAAGGAAAATGAGAC+AGG 0.518075 1.4:+69016676 MS.gene07333:CDS
AACAACCAGGTTTCAGAACA+GGG 0.521106 1.4:+69017629 MS.gene07333:CDS
ACCTATTGCCCCAGCGAGAG+TGG 0.529174 1.4:-69017033 None:intergenic
GATATTATTAAGGTTCAGAA+AGG 0.529508 1.4:+69016649 MS.gene07333:CDS
TTATTAAGGTTCAGAAAGGT+GGG 0.533186 1.4:+69016653 MS.gene07333:CDS
TGCTTGTGATGGTGACTCGT+TGG 0.542746 1.4:+69017664 MS.gene07333:CDS
GTGTCGGGGAATTGTTGTGC+GGG 0.544802 1.4:-69017425 None:intergenic
TCCGTTTGGATTATTCGTGT+CGG 0.545328 1.4:-69017441 None:intergenic
TATACAGGTTTGAGGAGAAG+TGG 0.547988 1.4:+69016917 MS.gene07333:intron
TGCGTCCCGATGTACGCCGC+GGG 0.548243 1.4:+69016972 MS.gene07333:CDS
TGTAATGTAATCAACCAGAA+TGG 0.571598 1.4:-69016734 None:intergenic
AAGCACATATATGAGAGGTA+TGG 0.571829 1.4:+69016627 None:intergenic
GTGTCCTCTTCTAATGTCCA+AGG 0.590757 1.4:-69016712 None:intergenic
CCCGACACGAATAATCCAAA+CGG 0.591334 1.4:+69017440 MS.gene07333:CDS
GTGACTCGTTGGAGAGTATG+TGG 0.591387 1.4:+69017675 MS.gene07333:CDS
TGAATTTGTTCGAGCAATCG+GGG 0.598757 1.4:-69017401 None:intergenic
TTCTACTGATGAAGAGTCCG+AGG 0.602605 1.4:-69017525 None:intergenic
CGTTTGGATTATTCGTGTCG+GGG 0.603555 1.4:-69017439 None:intergenic
AAGAGTACTGGTGCTTGTGA+TGG 0.605785 1.4:+69017653 MS.gene07333:CDS
TCAGAAAGGTGGGTCTGCAA+AGG 0.606644 1.4:+69016663 MS.gene07333:CDS
AGTTCAGTTTCAGGAATCAG+TGG 0.614581 1.4:+69017497 MS.gene07333:CDS
CGTGTCGGGGAATTGTTGTG+CGG 0.618297 1.4:-69017426 None:intergenic
ATGGTCAAGTTTCAACAACC+AGG 0.619728 1.4:+69017616 MS.gene07333:CDS
TACATTACAATACACGGTGA+AGG 0.619822 1.4:+69016748 MS.gene07333:CDS
GTAAAAGTTGCAGATTAAGG+TGG 0.634392 1.4:+69016939 MS.gene07333:CDS
GCCATGAAGGTTCAAAACCA+TGG 0.636081 1.4:+69017597 MS.gene07333:CDS
AGGTCCTTGGACATTAGAAG+AGG 0.639024 1.4:+69016708 MS.gene07333:CDS
CTTGACCTCCACTCTCGCTG+GGG 0.639112 1.4:+69017025 MS.gene07333:CDS
CTTGAACTGTGATATTCCCG+CGG 0.651123 1.4:-69016988 None:intergenic
TTGCGTCCCGATGTACGCCG+CGG 0.657533 1.4:+69016971 MS.gene07333:CDS
TACACAAGCACATATATGAG+AGG 0.672791 1.4:+69016622 None:intergenic
CTGCAAAGGAAAATGAGACA+GGG 0.674876 1.4:+69016677 MS.gene07333:CDS
GTTGATTACATTACAATACA+CGG 0.679344 1.4:+69016742 MS.gene07333:CDS
TATTGCCCCAGCGAGAGTGG+AGG 0.683135 1.4:-69017030 None:intergenic
ACAACCAGGTTTCAGAACAG+GGG 0.690824 1.4:+69017630 MS.gene07333:CDS
TGGTTGTTGAAACTTGACCA+TGG 0.698563 1.4:-69017614 None:intergenic
TGTGGAACGATGAGAACATG+TGG 0.754142 1.4:+69017693 MS.gene07333:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTATATATAAACTCTAAT+CGG - chr1.4:69017192-69017211 None:intergenic 10.0%
!! TAAAAAACAAACATATTATT+AGG - chr1.4:69017229-69017248 None:intergenic 10.0%
!!! TAATATGTTTGTTTTTTAAT+AGG + chr1.4:69017231-69017250 MS.gene07333:intron 10.0%
!! ACAAAACTAATTAATTATAC+AGG + chr1.4:69016902-69016921 MS.gene07333:intron 15.0%
!! ACAATGAAATAAAAAACTAT+TGG + chr1.4:69017291-69017310 MS.gene07333:CDS 15.0%
!!! ATTTAAAACACAATGATAAT+AGG - chr1.4:69017099-69017118 None:intergenic 15.0%
!!! TTTTGTTTAGAATAGATTAT+GGG - chr1.4:69016888-69016907 None:intergenic 15.0%
!! TAATTAATTATACAGGTTTG+AGG + chr1.4:69016909-69016928 MS.gene07333:intron 20.0%
!!! GTTTTGTTTAGAATAGATTA+TGG - chr1.4:69016889-69016908 None:intergenic 20.0%
!!! TATGTTTGTTTTTTAATAGG+TGG + chr1.4:69017234-69017253 MS.gene07333:intron 20.0%
! GATATTATTAAGGTTCAGAA+AGG + chr1.4:69016649-69016668 MS.gene07333:CDS 25.0%
! GTTGATTACATTACAATACA+CGG + chr1.4:69016742-69016761 MS.gene07333:CDS 25.0%
! TTCGGACAAAAATAATTCTT+TGG + chr1.4:69017565-69017584 MS.gene07333:CDS 25.0%
!!! AATAATTCTTTGGAGCTTTT+AGG + chr1.4:69017575-69017594 MS.gene07333:CDS 25.0%
ATTATTAAGGTTCAGAAAGG+TGG + chr1.4:69016652-69016671 MS.gene07333:CDS 30.0%
ATTCCAAGTTGCTTCAAATT+CGG + chr1.4:69017547-69017566 MS.gene07333:CDS 30.0%
TGTAATGTAATCAACCAGAA+TGG - chr1.4:69016737-69016756 None:intergenic 30.0%
TTATTAAGGTTCAGAAAGGT+GGG + chr1.4:69016653-69016672 MS.gene07333:CDS 30.0%
! GAGAGGTATGGATATTATTA+AGG + chr1.4:69016639-69016658 MS.gene07333:CDS 30.0%
AAAATTGCACAACATCTTCC+GGG + chr1.4:69017260-69017279 MS.gene07333:CDS 35.0%
AATGAGACAGGGTTAAGAAA+AGG + chr1.4:69016688-69016707 MS.gene07333:CDS 35.0%
ACATTGCAAAGTTCAGTTTC+AGG + chr1.4:69017488-69017507 MS.gene07333:CDS 35.0%
AGAAGGATATTTGATCCGTT+TGG - chr1.4:69017458-69017477 None:intergenic 35.0%
ATTTCATTGTCTGTTCTTCC+CGG - chr1.4:69017281-69017300 None:intergenic 35.0%
GAAAATTGCACAACATCTTC+CGG + chr1.4:69017259-69017278 MS.gene07333:CDS 35.0%
GTAAAAGTTGCAGATTAAGG+TGG + chr1.4:69016939-69016958 MS.gene07333:CDS 35.0%
GTGGTAAAAGTTGCAGATTA+AGG + chr1.4:69016936-69016955 MS.gene07333:CDS 35.0%
TACATTACAATACACGGTGA+AGG + chr1.4:69016748-69016767 MS.gene07333:CDS 35.0%
!! GCAATGTGTTTTGTTGAAGA+AGG - chr1.4:69017475-69017494 None:intergenic 35.0%
AACAACCAGGTTTCAGAACA+GGG + chr1.4:69017629-69017648 MS.gene07333:CDS 40.0%
AGTTCAGTTTCAGGAATCAG+TGG + chr1.4:69017497-69017516 MS.gene07333:CDS 40.0%
ATGGTCAAGTTTCAACAACC+AGG + chr1.4:69017616-69017635 MS.gene07333:CDS 40.0%
ATTAGAAGAGGACACCATTC+TGG + chr1.4:69016720-69016739 MS.gene07333:CDS 40.0%
CTGCAAAGGAAAATGAGACA+GGG + chr1.4:69016677-69016696 MS.gene07333:CDS 40.0%
TATACAGGTTTGAGGAGAAG+TGG + chr1.4:69016917-69016936 MS.gene07333:intron 40.0%
TCCGTTTGGATTATTCGTGT+CGG - chr1.4:69017444-69017463 None:intergenic 40.0%
TCTGCAAAGGAAAATGAGAC+AGG + chr1.4:69016676-69016695 MS.gene07333:CDS 40.0%
TGGTTGTTGAAACTTGACCA+TGG - chr1.4:69017617-69017636 None:intergenic 40.0%
! CTGAATTTGTTCGAGCAATC+GGG - chr1.4:69017405-69017424 None:intergenic 40.0%
! GCTGAATTTGTTCGAGCAAT+CGG - chr1.4:69017406-69017425 None:intergenic 40.0%
! TCTAATCGGACGCAACATTT+TGG - chr1.4:69017178-69017197 None:intergenic 40.0%
! TGAATTTGTTCGAGCAATCG+GGG - chr1.4:69017404-69017423 None:intergenic 40.0%
! TGTCCGAATTTGAAGCAACT+TGG - chr1.4:69017553-69017572 None:intergenic 40.0%
!!! ACCATGGTTTTGAACCTTCA+TGG - chr1.4:69017601-69017620 None:intergenic 40.0%
AATACCCTTGCATCTTCTGC+AGG + chr1.4:69016778-69016797 MS.gene07333:intron 45.0%
ACAACCAGGTTTCAGAACAG+GGG + chr1.4:69017630-69017649 MS.gene07333:CDS 45.0%
AGGAATCAGTGGTGTTTCCT+CGG + chr1.4:69017508-69017527 MS.gene07333:CDS 45.0%
AGGTCCTTGGACATTAGAAG+AGG + chr1.4:69016708-69016727 MS.gene07333:CDS 45.0%
CAACAACCAGGTTTCAGAAC+AGG + chr1.4:69017628-69017647 MS.gene07333:CDS 45.0%
CAGGGTTAAGAAAAGGTCCT+TGG + chr1.4:69016695-69016714 MS.gene07333:CDS 45.0%
CCCGACACGAATAATCCAAA+CGG + chr1.4:69017440-69017459 MS.gene07333:CDS 45.0%
CCGTTTGGATTATTCGTGTC+GGG - chr1.4:69017443-69017462 None:intergenic 45.0%
CGTTTGGATTATTCGTGTCG+GGG - chr1.4:69017442-69017461 None:intergenic 45.0%
CTTGAACTGTGATATTCCCG+CGG - chr1.4:69016991-69017010 None:intergenic 45.0%
GCCATGAAGGTTCAAAACCA+TGG + chr1.4:69017597-69017616 MS.gene07333:CDS 45.0%
GTGTCCTCTTCTAATGTCCA+AGG - chr1.4:69016715-69016734 None:intergenic 45.0%
TGTGGAACGATGAGAACATG+TGG + chr1.4:69017693-69017712 MS.gene07333:CDS 45.0%
TTCTACTGATGAAGAGTCCG+AGG - chr1.4:69017528-69017547 None:intergenic 45.0%
! GAGACGTTTTACGTCACGTT+TGG + chr1.4:69017375-69017394 MS.gene07333:CDS 45.0%
! TTGGAGCTTTTAGGCCATGA+AGG + chr1.4:69017584-69017603 MS.gene07333:CDS 45.0%
!! AAGAGTACTGGTGCTTGTGA+TGG + chr1.4:69017653-69017672 MS.gene07333:CDS 45.0%
ACATGCCTGCAGAAGATGCA+AGG - chr1.4:69016786-69016805 None:intergenic 50.0%
CAATACACGGTGAAGGTCAC+TGG + chr1.4:69016755-69016774 MS.gene07333:intron 50.0%
CATGCCTGCAGAAGATGCAA+GGG - chr1.4:69016785-69016804 None:intergenic 50.0%
TCAGAAAGGTGGGTCTGCAA+AGG + chr1.4:69016663-69016682 MS.gene07333:CDS 50.0%
! GTGACTCGTTGGAGAGTATG+TGG + chr1.4:69017675-69017694 MS.gene07333:CDS 50.0%
! TCAGAACAGGGGAAGAGTAC+TGG + chr1.4:69017641-69017660 MS.gene07333:CDS 50.0%
! TGCTTGTGATGGTGACTCGT+TGG + chr1.4:69017664-69017683 MS.gene07333:CDS 50.0%
!! TCTTCCCCTGTTCTGAAACC+TGG - chr1.4:69017637-69017656 None:intergenic 50.0%
ATATTCCCGCGGCGTACATC+GGG - chr1.4:69016980-69016999 None:intergenic 55.0%
CGTGTCGGGGAATTGTTGTG+CGG - chr1.4:69017429-69017448 None:intergenic 55.0%
GATATTCCCGCGGCGTACAT+CGG - chr1.4:69016981-69017000 None:intergenic 55.0%
GTGTCGGGGAATTGTTGTGC+GGG - chr1.4:69017428-69017447 None:intergenic 55.0%
TCTTGACCTCCACTCTCGCT+GGG + chr1.4:69017024-69017043 MS.gene07333:CDS 55.0%
TTCTTGACCTCCACTCTCGC+TGG + chr1.4:69017023-69017042 MS.gene07333:CDS 55.0%
ACCTATTGCCCCAGCGAGAG+TGG - chr1.4:69017036-69017055 None:intergenic 60.0%
CTTGACCTCCACTCTCGCTG+GGG + chr1.4:69017025-69017044 MS.gene07333:CDS 60.0%
TATTGCCCCAGCGAGAGTGG+AGG - chr1.4:69017033-69017052 None:intergenic 60.0%
TCCACTCTCGCTGGGGCAAT+AGG + chr1.4:69017032-69017051 MS.gene07333:CDS 60.0%
TTGCGTCCCGATGTACGCCG+CGG + chr1.4:69016971-69016990 MS.gene07333:CDS 65.0%
TGCGTCCCGATGTACGCCGC+GGG + chr1.4:69016972-69016991 MS.gene07333:CDS 70.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 69016637 69017769 69016637 ID=MS.gene07333
chr1.4 mRNA 69016637 69017769 69016637 ID=MS.gene07333.t1;Parent=MS.gene07333
chr1.4 exon 69016637 69016769 69016637 ID=MS.gene07333.t1.exon1;Parent=MS.gene07333.t1
chr1.4 CDS 69016637 69016769 69016637 ID=cds.MS.gene07333.t1;Parent=MS.gene07333.t1
chr1.4 exon 69016924 69017053 69016924 ID=MS.gene07333.t1.exon2;Parent=MS.gene07333.t1
chr1.4 CDS 69016924 69017053 69016924 ID=cds.MS.gene07333.t1;Parent=MS.gene07333.t1
chr1.4 exon 69017253 69017769 69017253 ID=MS.gene07333.t1.exon3;Parent=MS.gene07333.t1
chr1.4 CDS 69017253 69017769 69017253 ID=cds.MS.gene07333.t1;Parent=MS.gene07333.t1
Gene Sequence

>MS.gene07333

ATGAGAGGTATGGATATTATTAAGGTTCAGAAAGGTGGGTCTGCAAAGGAAAATGAGACAGGGTTAAGAAAAGGTCCTTGGACATTAGAAGAGGACACCATTCTGGTTGATTACATTACAATACACGGTGAAGGTCACTGGAATACCCTTGCATCTTCTGCAGGCATGTATATTTTTATATATTTTCTTCTAGCTAGCTCTTTAAATTTATTAGTTTATAGCATAGCTGCATGACTAGCTTATTGATTCCCATAATCTATTCTAAACAAAACTAATTAATTATACAGGTTTGAGGAGAAGTGGTAAAAGTTGCAGATTAAGGTGGCTAAACTACTTGCGTCCCGATGTACGCCGCGGGAATATCACAGTTCAAGAACAGATATTGATTCTTGACCTCCACTCTCGCTGGGGCAATAGGTATACAAAATCTTCTATTTTCATACTTTACTTACTTTATAGCCTATTATCATTGTGTTTTAAATTCAAATAACATGAACTTATTATAATGCATACGCATATATATATGTATTGAAAAAAACCAAAATGTTGCGTCCGATTAGAGTTTATATATAAATAGTGACATATTTCACCTAATAATATGTTTGTTTTTTAATAGGTGGTCGAAAATTGCACAACATCTTCCGGGAAGAACAGACAATGAAATAAAAAACTATTGGAGAACAAGAGTGATCAAGCAAGCAAAACAGCTCAAGTGTGATGTCAACAGCAAACAATTCAGAGACGTTTTACGTCACGTTTGGATGCCCCGATTGCTCGAACAAATTCAGCCCGCACAACAATTCCCCGACACGAATAATCCAAACGGATCAAATATCCTTCTTCAACAAAACACATTGCAAAGTTCAGTTTCAGGAATCAGTGGTGTTTCCTCGGACTCTTCATCAGTAGAATTCCAAGTTGCTTCAAATTCGGACAAAAATAATTCTTTGGAGCTTTTAGGCCATGAAGGTTCAAAACCATGGTCAAGTTTCAACAACCAGGTTTCAGAACAGGGGAAGAGTACTGGTGCTTGTGATGGTGACTCGTTGGAGAGTATGTGGAACGATGAGAACATGTGGTTTTTGCAACAACTTTACGAAGATGTTGAAATAAAATACAATTTACTTGCGTGA
Protein sequence

>MS.gene07333.t1

MRGMDIIKVQKGGSAKENETGLRKGPWTLEEDTILVDYITIHGEGLRRSGKSCRLRWLNYLRPDVRRGNITVQEQILILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVIKQAKQLKCDVNSKQFRDVLRHVWMPRLLEQIQPAQQFPDTNNPNGSNILLQQNTLQSSVSGISGVSSDSSSVEFQVASNSDKNNSLELLGHEGSKPWSSFNNQVSEQGKSTGACDGDSLESMWNDENMWFLQQLYEDVEIKYNLLA