AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene073431

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073431.t1 MTR_2g437960 81.111 180 34 0 1 180 203 382 1.89e-98 296
MS.gene073431.t1 MTR_2g437960 81.111 180 34 0 1 180 203 382 4.05e-98 296
MS.gene073431.t1 MTR_2g437940 78.333 180 39 0 1 180 171 350 2.11e-91 278
MS.gene073431.t1 MTR_2g437170 77.222 180 41 0 1 180 207 386 9.18e-91 277
MS.gene073431.t1 MTR_2g438020 78.889 180 38 0 1 180 254 433 1.57e-90 279
MS.gene073431.t1 MTR_2g437100 77.778 180 40 0 1 180 212 391 2.88e-90 276
MS.gene073431.t1 MTR_2g437150 76.667 180 42 0 1 180 207 386 4.16e-90 275
MS.gene073431.t1 MTR_2g437180 77.222 180 39 1 1 180 199 376 7.82e-90 274
MS.gene073431.t1 MTR_2g437200 77.778 180 40 0 1 180 215 394 3.32e-89 273
MS.gene073431.t1 MTR_2g437120 76.667 180 41 1 1 180 201 379 2.50e-87 269
MS.gene073431.t1 MTR_2g437240 74.444 180 46 0 1 180 215 394 6.47e-86 265
MS.gene073431.t1 MTR_2g438010 72.778 180 49 0 1 180 220 399 6.69e-86 265
MS.gene073431.t1 MTR_2g437990 72.222 180 50 0 1 180 199 378 8.45e-84 260
MS.gene073431.t1 MTR_2g437160 71.667 180 51 0 1 180 212 391 2.37e-82 256
MS.gene073431.t1 MTR_2g076320 71.111 180 52 0 1 180 200 379 3.30e-82 255
MS.gene073431.t1 MTR_2g437130 69.444 180 55 0 1 180 188 367 4.97e-81 251
MS.gene073431.t1 MTR_2g437160 71.429 168 48 0 13 180 133 300 1.77e-75 235
MS.gene073431.t1 MTR_2g437060 59.091 176 72 0 5 180 206 381 6.36e-64 207
MS.gene073431.t1 MTR_2g436400 57.386 176 75 0 5 180 198 373 1.09e-62 204
MS.gene073431.t1 MTR_2g436440 57.386 176 75 0 5 180 197 372 1.74e-61 201
MS.gene073431.t1 MTR_2g437080 56.250 176 77 0 5 180 191 366 3.06e-61 200
MS.gene073431.t1 MTR_4g119550 52.910 189 89 0 1 189 197 385 9.61e-61 199
MS.gene073431.t1 MTR_2g437020 60.112 178 68 2 5 180 190 366 1.01e-60 199
MS.gene073431.t1 MTR_2g437040 55.682 176 78 0 5 180 191 366 9.83e-59 194
MS.gene073431.t1 MTR_2g437090 57.792 154 65 0 27 180 1 154 4.86e-57 182
MS.gene073431.t1 MTR_2g437030 52.778 180 85 0 1 180 273 452 8.94e-56 188
MS.gene073431.t1 MTR_4g120380 49.444 180 91 0 1 180 189 368 1.05e-51 175
MS.gene073431.t1 MTR_4g119580 49.444 180 91 0 1 180 189 368 1.04e-50 173
MS.gene073431.t1 MTR_2g437260 43.056 216 114 3 1 214 181 389 9.45e-50 171
MS.gene073431.t1 MTR_2g436460 51.381 181 87 1 1 180 192 372 9.05e-49 168
MS.gene073431.t1 MTR_4g120380 51.235 162 79 0 1 162 189 350 2.47e-47 165
MS.gene073431.t1 MTR_4g120380 52.381 63 30 0 87 149 354 416 5.37e-12 66.6
MS.gene073431.t1 MTR_2g019810 46.524 187 86 4 1 180 176 355 6.47e-39 141
MS.gene073431.t1 MTR_2g019840 46.067 178 92 3 5 180 192 367 7.48e-39 142
MS.gene073431.t1 MTR_4g119570 40.000 180 75 1 1 180 81 227 2.30e-35 129
MS.gene073431.t1 MTR_7g068350 52.632 114 48 1 228 335 116 229 1.14e-29 114
MS.gene073431.t1 MTR_3g085240 57.609 92 22 1 84 175 174 248 8.97e-24 98.6
MS.gene073431.t1 MTR_4g007490 30.000 180 124 1 1 178 185 364 1.33e-22 97.4
MS.gene073431.t1 MTR_3g450500 28.333 180 127 1 1 178 187 366 1.61e-21 94.4
MS.gene073431.t1 MTR_2g436380 60.000 60 24 0 27 86 1 60 8.72e-16 77.0
MS.gene073431.t1 MTR_5g098775 58.065 62 26 0 251 312 129 190 2.01e-14 71.2
MS.gene073431.t1 MTR_8g081000 27.703 148 107 0 31 178 234 381 8.94e-14 72.0
MS.gene073431.t1 MTR_8g081000 27.703 148 107 0 31 178 234 381 9.81e-14 72.0
MS.gene073431.t1 MTR_8g081000 27.703 148 107 0 31 178 234 381 1.09e-13 71.6
MS.gene073431.t1 MTR_8g080990 30.682 176 120 2 5 178 193 368 1.56e-13 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene073431.t1 AT5G07900 34.426 183 117 2 1 180 216 398 2.16e-29 117
MS.gene073431.t1 AT5G64950 33.143 175 111 2 5 173 192 366 3.95e-18 84.7
MS.gene073431.t1 AT1G21150 30.220 182 120 3 3 179 205 384 1.60e-16 80.1
MS.gene073431.t1 AT1G21150 30.220 182 120 3 3 179 269 448 1.93e-16 80.5
MS.gene073431.t1 AT1G21150 30.220 182 120 3 3 179 169 348 2.14e-16 79.3

Find 61 sgRNAs with CRISPR-Local

Find 98 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAATTTGATGACTGATTT+TGG 0.089088 2.4:-53822430 None:intergenic
TTGGAGGAAGTTAAGGATTT+AGG 0.126977 2.4:-53822331 MS.gene073431:CDS
TTCAATTGATAAGATTAATT+TGG 0.211307 2.4:-53822149 MS.gene073431:CDS
ATTAAGTTGATAAAAGTTAA+AGG 0.249611 2.4:+53821360 None:intergenic
AAACTATAACCAAACATAAT+TGG 0.255041 2.4:+53822070 None:intergenic
TGGAGGAAGTTAAGGATTTA+GGG 0.265989 2.4:-53822330 MS.gene073431:CDS
TTAATTTGGTGATGAGCTTT+TGG 0.267548 2.4:-53822135 MS.gene073431:CDS
AAGTCAAAGCCATCTATATT+TGG 0.268618 2.4:-53822376 MS.gene073431:CDS
AGACCAACCCCATTTCTTAA+AGG 0.278227 2.4:+53822222 None:intergenic
ACAATAATTGATCTCAGATT+TGG 0.293409 2.4:+53821315 None:intergenic
AATTGACCCTTTAAAATTGC+TGG 0.297294 2.4:-53821104 MS.gene073431:CDS
GGTTGTTAGGATATAGAATT+TGG 0.300367 2.4:-53821180 MS.gene073431:CDS
GCGTTGATGGTTTGGTTGTT+AGG 0.308310 2.4:-53821193 MS.gene073431:CDS
TTGGTTATAGTTTACATAAA+AGG 0.315414 2.4:-53822060 MS.gene073431:CDS
AACTTCTCAGAATAAGTAAA+TGG 0.317837 2.4:+53821962 None:intergenic
AAAGGATTTGATTAAGTCAT+TGG 0.323129 2.4:-53822350 MS.gene073431:CDS
CAGCAGATGGACGGCGTTGA+TGG 0.337710 2.4:-53821206 MS.gene073431:CDS
TCCTTTGAACCAAATATAGA+TGG 0.343999 2.4:+53822367 None:intergenic
TCTTTCTGCAAATCATGATT+TGG 0.356676 2.4:-53821143 MS.gene073431:CDS
AAGTTGATACCTTTAAGAAA+TGG 0.365182 2.4:-53822231 MS.gene073431:CDS
AGTTGATACCTTTAAGAAAT+GGG 0.365271 2.4:-53822230 MS.gene073431:CDS
AAAGTTAAAGGTATTGAAGT+TGG 0.366681 2.4:+53821372 None:intergenic
ACTAAATGTCCAATTATGTT+TGG 0.386959 2.4:-53822079 MS.gene073431:CDS
TATGATGTTAGGAAACCTAT+AGG 0.405755 2.4:-53821421 MS.gene073431:CDS
TAAGTCATTGGAGGAAGTTA+AGG 0.406128 2.4:-53822338 MS.gene073431:CDS
AAAATCAACTAAATTTGAAA+TGG 0.413967 2.4:+53821528 None:intergenic
GCCATCTATATTTGGTTCAA+AGG 0.418741 2.4:-53822368 MS.gene073431:CDS
GATGGACGGCGTTGATGGTT+TGG 0.420854 2.4:-53821201 MS.gene073431:CDS
TAAAGAACTGCACACCCTAT+AGG 0.422020 2.4:+53821406 None:intergenic
TCAATTGGGTCGGAATTCCT+TGG 0.436015 2.4:-53822107 MS.gene073431:CDS
AAGTTAAAGGTATTGAAGTT+GGG 0.440275 2.4:+53821373 None:intergenic
AATCTAGCAATGGTAGAATC+AGG 0.440847 2.4:+53822403 None:intergenic
GCCAACTGAATTATGATGTT+AGG 0.441392 2.4:-53821432 MS.gene073431:CDS
ATTGACCCTTTAAAATTGCT+GGG 0.471246 2.4:-53821103 MS.gene073431:CDS
TCCTAACATCATAATTCAGT+TGG 0.471346 2.4:+53821431 None:intergenic
CAGTAGAGCTGTGGGTGGGT+GGG 0.486216 2.4:-53821479 MS.gene073431:CDS
CTGCAATTTCTATCTATGAA+AGG 0.500353 2.4:-53822016 MS.gene073431:CDS
TCAGTAGAGCTGTGGGTGGG+TGG 0.512090 2.4:-53821480 MS.gene073431:CDS
ATGATGTTAGGAAACCTATA+GGG 0.519372 2.4:-53821420 MS.gene073431:CDS
TACATAAAAGGATCATTCCA+AGG 0.520767 2.4:-53822048 MS.gene073431:CDS
CAAGCATTTAGGATACATCC+TGG 0.534523 2.4:-53822184 MS.gene073431:CDS
AATTGCAGAACTGAGGCCCT+TGG 0.541980 2.4:+53822031 None:intergenic
AGGGTGTGCAGTTCTTTATG+AGG 0.545642 2.4:-53821401 MS.gene073431:CDS
GTTGATACCTTTAAGAAATG+GGG 0.553181 2.4:-53822229 MS.gene073431:CDS
TGGACATTTAGTAAGTTCCA+AGG 0.554638 2.4:+53822090 None:intergenic
ACTTTGTCATTATCAGCAGA+TGG 0.559067 2.4:-53821219 MS.gene073431:CDS
ATTTGGTTAACTTGTCGCGC+TGG 0.561761 2.4:+53821332 None:intergenic
GGATTTGATTAAGTCATTGG+AGG 0.571043 2.4:-53822347 MS.gene073431:CDS
AAAATCATCAGTAGAGCTGT+GGG 0.582430 2.4:-53821487 MS.gene073431:CDS
TGACTTAAGCAATCTAGCAA+TGG 0.584754 2.4:+53822393 None:intergenic
ATACCTTTAAGAAATGGGGT+TGG 0.587688 2.4:-53822225 MS.gene073431:CDS
TTTGGGTTAATCAATTGGGT+CGG 0.591122 2.4:-53822117 MS.gene073431:CDS
TGTCATTATCAGCAGATGGA+CGG 0.593033 2.4:-53821215 MS.gene073431:CDS
TAAAATCATCAGTAGAGCTG+TGG 0.600418 2.4:-53821488 MS.gene073431:CDS
ACATAAAAGGATCATTCCAA+GGG 0.612722 2.4:-53822047 MS.gene073431:CDS
ATTTCAAAAGTAGTCGTCGA+AGG 0.618575 2.4:+53822301 None:intergenic
TTGACCCTTTAAAATTGCTG+GGG 0.626293 2.4:-53821102 MS.gene073431:CDS
ATCATCAGTAGAGCTGTGGG+TGG 0.643859 2.4:-53821484 MS.gene073431:CDS
ATTGAAGTCAACATCAAACC+AGG 0.644500 2.4:+53822166 None:intergenic
AGATAGAAATTGCAGAACTG+AGG 0.664204 2.4:+53822024 None:intergenic
TCATCAGTAGAGCTGTGGGT+GGG 0.667745 2.4:-53821483 MS.gene073431:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATCAACTAAATTTGAAA+TGG + chr2.4:53821986-53822005 None:intergenic 15.0%
!! TTCAATTGATAAGATTAATT+TGG - chr2.4:53821362-53821381 MS.gene073431:CDS 15.0%
!!! ATTAAGTTGATAAAAGTTAA+AGG + chr2.4:53822154-53822173 None:intergenic 15.0%
!! AAACTATAACCAAACATAAT+TGG + chr2.4:53821444-53821463 None:intergenic 20.0%
!! AAAGTTTGAGTAAAAAACTT+TGG - chr2.4:53821250-53821269 MS.gene073431:CDS 20.0%
!! AAGTTTGAGTAAAAAACTTT+GGG - chr2.4:53821251-53821270 MS.gene073431:CDS 20.0%
!! TTGGTTATAGTTTACATAAA+AGG - chr2.4:53821451-53821470 MS.gene073431:CDS 20.0%
! AAAGGATTTGATTAAGTCAT+TGG - chr2.4:53821161-53821180 MS.gene073431:CDS 25.0%
! AACTTCTCAGAATAAGTAAA+TGG + chr2.4:53821552-53821571 None:intergenic 25.0%
! AATGAAACTTGCAAATACAA+AGG - chr2.4:53821641-53821660 MS.gene073431:intron 25.0%
! ACAATAATTGATCTCAGATT+TGG + chr2.4:53822199-53822218 None:intergenic 25.0%
! ACTAAATGTCCAATTATGTT+TGG - chr2.4:53821432-53821451 MS.gene073431:CDS 25.0%
! AGATCAACAAATTACACATT+TGG + chr2.4:53821688-53821707 None:intergenic 25.0%
! TTATCTATTAAAGCTGTATG+AGG - chr2.4:53821614-53821633 MS.gene073431:intron 25.0%
!! AGTTGATACCTTTAAGAAAT+GGG - chr2.4:53821281-53821300 MS.gene073431:CDS 25.0%
!!! AAAGTTAAAGGTATTGAAGT+TGG + chr2.4:53822142-53822161 None:intergenic 25.0%
!!! AAGTTAAAGGTATTGAAGTT+GGG + chr2.4:53822141-53822160 None:intergenic 25.0%
!!! AAGTTGATACCTTTAAGAAA+TGG - chr2.4:53821280-53821299 MS.gene073431:CDS 25.0%
!!! TCTTTGAAATTGCATGTAAT+GGG + chr2.4:53821844-53821863 None:intergenic 25.0%
AAGTCAAAGCCATCTATATT+TGG - chr2.4:53821135-53821154 MS.gene073431:CDS 30.0%
ACATAAAAGGATCATTCCAA+GGG - chr2.4:53821464-53821483 MS.gene073431:CDS 30.0%
ATGATGTTAGGAAACCTATA+GGG - chr2.4:53822091-53822110 MS.gene073431:CDS 30.0%
CATTACATGCAATTTCAAAG+AGG - chr2.4:53821843-53821862 MS.gene073431:intron 30.0%
CCAAAAAAATGATCTGTAAC+TGG - chr2.4:53822238-53822257 MS.gene073431:CDS 30.0%
CTGCAATTTCTATCTATGAA+AGG - chr2.4:53821495-53821514 MS.gene073431:CDS 30.0%
GGTTGTTAGGATATAGAATT+TGG - chr2.4:53822331-53822350 MS.gene073431:CDS 30.0%
TACATAAAAGGATCATTCCA+AGG - chr2.4:53821463-53821482 MS.gene073431:CDS 30.0%
TATGATGTTAGGAAACCTAT+AGG - chr2.4:53822090-53822109 MS.gene073431:CDS 30.0%
TCAACAAATTACACATTTGG+TGG + chr2.4:53821685-53821704 None:intergenic 30.0%
TCCTAACATCATAATTCAGT+TGG + chr2.4:53822083-53822102 None:intergenic 30.0%
TCCTTTGAACCAAATATAGA+TGG + chr2.4:53821147-53821166 None:intergenic 30.0%
TCTTTCTGCAAATCATGATT+TGG - chr2.4:53822368-53822387 MS.gene073431:CDS 30.0%
TGGATAGAAGAAAAAACTGT+GGG - chr2.4:53822258-53822277 MS.gene073431:CDS 30.0%
TTGAAATACTTGTGCTTTCT+AGG - chr2.4:53821719-53821738 MS.gene073431:intron 30.0%
! GTTGATACCTTTAAGAAATG+GGG - chr2.4:53821282-53821301 MS.gene073431:CDS 30.0%
!! AATTGACCCTTTAAAATTGC+TGG - chr2.4:53822407-53822426 MS.gene073431:CDS 30.0%
!! ATTGACCCTTTAAAATTGCT+GGG - chr2.4:53822408-53822427 MS.gene073431:CDS 30.0%
!! CAAGTTTGTTTTCAGCTTTA+AGG - chr2.4:53821581-53821600 MS.gene073431:intron 30.0%
!! CTCTTTGAAATTGCATGTAA+TGG + chr2.4:53821845-53821864 None:intergenic 30.0%
!!! AAGCTGTTTTTCAAGCATTT+AGG - chr2.4:53821316-53821335 MS.gene073431:CDS 30.0%
!!! AGCTTTTGGGTTAATCAATT+GGG - chr2.4:53821390-53821409 MS.gene073431:CDS 30.0%
!!! CCAGTTACAGATCATTTTTT+TGG + chr2.4:53822241-53822260 None:intergenic 30.0%
!!! GACTACTTTTGAAATTGCTT+TGG - chr2.4:53821218-53821237 MS.gene073431:CDS 30.0%
!!! TAATTTGGTGATGAGCTTTT+GGG - chr2.4:53821377-53821396 MS.gene073431:CDS 30.0%
!!! TTAATTTGGTGATGAGCTTT+TGG - chr2.4:53821376-53821395 MS.gene073431:CDS 30.0%
!!! TTGCTATTTTGAACTACTGT+TGG - chr2.4:53821778-53821797 MS.gene073431:intron 30.0%
AAAATCATCAGTAGAGCTGT+GGG - chr2.4:53822024-53822043 MS.gene073431:CDS 35.0%
AATCTAGCAATGGTAGAATC+AGG + chr2.4:53821111-53821130 None:intergenic 35.0%
ACTTTGTCATTATCAGCAGA+TGG - chr2.4:53822292-53822311 MS.gene073431:CDS 35.0%
AGATAGAAATTGCAGAACTG+AGG + chr2.4:53821490-53821509 None:intergenic 35.0%
ATCTGTTCTTCAGCAACTAT+TGG - chr2.4:53821892-53821911 MS.gene073431:intron 35.0%
ATTGAAGTCAACATCAAACC+AGG + chr2.4:53821348-53821367 None:intergenic 35.0%
ATTTCAAAAGTAGTCGTCGA+AGG + chr2.4:53821213-53821232 None:intergenic 35.0%
CCAGCAACAATACAATAGAA+AGG + chr2.4:53821928-53821947 None:intergenic 35.0%
CCTTTCTATTGTATTGTTGC+TGG - chr2.4:53821925-53821944 MS.gene073431:CDS 35.0%
CTGGATAGAAGAAAAAACTG+TGG - chr2.4:53822257-53822276 MS.gene073431:CDS 35.0%
GCAAATACAAAGGAGAACAT+TGG - chr2.4:53821651-53821670 MS.gene073431:intron 35.0%
GCCAACTGAATTATGATGTT+AGG - chr2.4:53822079-53822098 MS.gene073431:CDS 35.0%
GGATTTGATTAAGTCATTGG+AGG - chr2.4:53821164-53821183 MS.gene073431:CDS 35.0%
TAAAATCATCAGTAGAGCTG+TGG - chr2.4:53822023-53822042 MS.gene073431:CDS 35.0%
TAAGTCATTGGAGGAAGTTA+AGG - chr2.4:53821173-53821192 MS.gene073431:CDS 35.0%
TGACTTAAGCAATCTAGCAA+TGG + chr2.4:53821121-53821140 None:intergenic 35.0%
TGGACATTTAGTAAGTTCCA+AGG + chr2.4:53821424-53821443 None:intergenic 35.0%
TGGAGGAAGTTAAGGATTTA+GGG - chr2.4:53821181-53821200 MS.gene073431:CDS 35.0%
TTGGAGGAAGTTAAGGATTT+AGG - chr2.4:53821180-53821199 MS.gene073431:CDS 35.0%
! ACATTCCCCAGCAATTTTAA+AGG + chr2.4:53822417-53822436 None:intergenic 35.0%
! ATACCTTTAAGAAATGGGGT+TGG - chr2.4:53821286-53821305 MS.gene073431:CDS 35.0%
! CAAATTACACATTTGGTGGA+TGG + chr2.4:53821681-53821700 None:intergenic 35.0%
! CATTCCCCAGCAATTTTAAA+GGG + chr2.4:53822416-53822435 None:intergenic 35.0%
! GCCATCTATATTTGGTTCAA+AGG - chr2.4:53821143-53821162 MS.gene073431:CDS 35.0%
! GTTGCTGAAGAACAGATTTT+TGG + chr2.4:53821889-53821908 None:intergenic 35.0%
! TTTGGGTTAATCAATTGGGT+CGG - chr2.4:53821394-53821413 MS.gene073431:CDS 35.0%
!! TTGACCCTTTAAAATTGCTG+GGG - chr2.4:53822409-53822428 MS.gene073431:CDS 35.0%
!!! GAGCTTTTGGGTTAATCAAT+TGG - chr2.4:53821389-53821408 MS.gene073431:CDS 35.0%
!!! GTTTGTTTTCAGCTTTAAGG+AGG - chr2.4:53821584-53821603 MS.gene073431:intron 35.0%
AGACCAACCCCATTTCTTAA+AGG + chr2.4:53821292-53821311 None:intergenic 40.0%
ATACTTGTGCTTTCTAGGTC+AGG - chr2.4:53821724-53821743 MS.gene073431:intron 40.0%
GCACAAAAATGGTACAGCAA+GGG + chr2.4:53821953-53821972 None:intergenic 40.0%
TAAAGAACTGCACACCCTAT+AGG + chr2.4:53822108-53822127 None:intergenic 40.0%
TGCACAAAAATGGTACAGCA+AGG + chr2.4:53821954-53821973 None:intergenic 40.0%
TGCTTTCTAGGTCAGGATAA+GGG - chr2.4:53821731-53821750 MS.gene073431:intron 40.0%
TGTCATTATCAGCAGATGGA+CGG - chr2.4:53822296-53822315 MS.gene073431:CDS 40.0%
! CAAGCATTTAGGATACATCC+TGG - chr2.4:53821327-53821346 MS.gene073431:CDS 40.0%
!! GCTGAAGAACAGATTTTTGG+AGG + chr2.4:53821886-53821905 None:intergenic 40.0%
!! TTGCTGTACCATTTTTGTGC+AGG - chr2.4:53821953-53821972 MS.gene073431:CDS 40.0%
AGGGTGTGCAGTTCTTTATG+AGG - chr2.4:53822110-53822129 MS.gene073431:CDS 45.0%
GAGCAACACCTGCACAAAAA+TGG + chr2.4:53821964-53821983 None:intergenic 45.0%
GTGCTTTCTAGGTCAGGATA+AGG - chr2.4:53821730-53821749 MS.gene073431:intron 45.0%
TCAATTGGGTCGGAATTCCT+TGG - chr2.4:53821404-53821423 MS.gene073431:CDS 45.0%
!! ATTTGGTTAACTTGTCGCGC+TGG + chr2.4:53822182-53822201 None:intergenic 45.0%
!! GCGTTGATGGTTTGGTTGTT+AGG - chr2.4:53822318-53822337 MS.gene073431:CDS 45.0%
AATTGCAGAACTGAGGCCCT+TGG + chr2.4:53821483-53821502 None:intergenic 50.0%
ATCATCAGTAGAGCTGTGGG+TGG - chr2.4:53822027-53822046 MS.gene073431:CDS 50.0%
TCATCAGTAGAGCTGTGGGT+GGG - chr2.4:53822028-53822047 MS.gene073431:CDS 50.0%
!! GATGGACGGCGTTGATGGTT+TGG - chr2.4:53822310-53822329 MS.gene073431:CDS 55.0%
CAGTAGAGCTGTGGGTGGGT+GGG - chr2.4:53822032-53822051 MS.gene073431:CDS 60.0%
TCAGTAGAGCTGTGGGTGGG+TGG - chr2.4:53822031-53822050 MS.gene073431:CDS 60.0%
! CAGCAGATGGACGGCGTTGA+TGG - chr2.4:53822305-53822324 MS.gene073431:CDS 60.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 53821090 53822443 53821090 ID=MS.gene073431
chr2.4 mRNA 53821090 53822443 53821090 ID=MS.gene073431.t1;Parent=MS.gene073431
chr2.4 exon 53821905 53822443 53821905 ID=MS.gene073431.t1.exon1;Parent=MS.gene073431.t1
chr2.4 CDS 53821905 53822443 53821905 ID=cds.MS.gene073431.t1;Parent=MS.gene073431.t1
chr2.4 exon 53821090 53821558 53821090 ID=MS.gene073431.t1.exon2;Parent=MS.gene073431.t1
chr2.4 CDS 53821090 53821558 53821090 ID=cds.MS.gene073431.t1;Parent=MS.gene073431.t1
Gene Sequence

>MS.gene073431

ATGACTGATTTTGGAGTTCCTGATTCTACCATTGCTAGATTGCTTAAGTCAAAGCCATCTATATTTGGTTCAAAGGATTTGATTAAGTCATTGGAGGAAGTTAAGGATTTAGGGTTTCATCCTTCGACGACTACTTTTGAAATTGCTTTGGCAGCTAAGAAAAGTTTGAGTAAAAAACTTTGGGATGAGAAAGTTGATACCTTTAAGAAATGGGGTTGGTCTAATGAAGCTGTTTTTCAAGCATTTAGGATACATCCTGGTTTGATGTTGACTTCAATTGATAAGATTAATTTGGTGATGAGCTTTTGGGTTAATCAATTGGGTCGGAATTCCTTGGAACTTACTAAATGTCCAATTATGTTTGGTTATAGTTTACATAAAAGGATCATTCCAAGGGCCTCAGTTCTGCAATTTCTATCTATGAAAGGTTTGCGAAAAAAGAATGCAAGCTTAGTTAAACCATTTACTTATTCTGAGAAGTTGTTCTTGAACAAGTTTGTTTTCAGCTTTAAGGAGGAGTCTGATTATCTATTAAAGCTGTATGAGGAAAAAATGAAACTTGCAAATACAAAGGAGAACATTGGCATGCCATCCACCAAATGTGTAATTTGTTGATCTTCTTCTTTGATTTGAAATACTTGTGCTTTCTAGGTCAGGATAAGGGTTTAGTATTGTTAGCTTGTTTCATTTGCTATTTTGAACTACTGTTGGTTTTTGTTATCATCAATTATAGTTACAATTTCAACGCTCACCCATTACATGCAATTTCAAAGAGGTCTTTTGAACTCACAAACCTCCAAAAATCTGTTCTTCAGCAACTATTGGTATATTTCTTCCTTTCTATTGTATTGTTGCTGGTGCCCTTGCTGTACCATTTTTGTGCAGGTGTTGCTCCATTTCAAATTTAGTTGATTTTGTTCTTAAGATGTTTGATAAAATCATCAGTAGAGCTGTGGGTGGGTGGGCACTTGAGTTGTTCGATAGAATACGCCAACTGAATTATGATGTTAGGAAACCTATAGGGTGTGCAGTTCTTTATGAGGATGATCCCAACTTCAATACCTTTAACTTTTATCAACTTAATTATGTCCAGCGCGACAAGTTAACCAAATCTGAGATCAATTATTGTCAAAATGCGTGTGATGAAGCCAAAAAAATGATCTGTAACTGGATAGAAGAAAAAACTGTGGGTTCTCACAATTACTTTGTCATTATCAGCAGATGGACGGCGTTGATGGTTTGGTTGTTAGGATATAGAATTTGGTTTGATTTCTCATATCTTTCTGCAAATCATGATTTGGTAGACTCTTTCTCTAGAATTGACCCTTTAAAATTGCTGGGGAATGTCCCTTAA
Protein sequence

>MS.gene073431.t1

MTDFGVPDSTIARLLKSKPSIFGSKDLIKSLEEVKDLGFHPSTTTFEIALAAKKSLSKKLWDEKVDTFKKWGWSNEAVFQAFRIHPGLMLTSIDKINLVMSFWVNQLGRNSLELTKCPIMFGYSLHKRIIPRASVLQFLSMKGLRKKNASLVKPFTYSEKLFLNKFVFSFKEESDYLLKLCCSISNLVDFVLKMFDKIISRAVGGWALELFDRIRQLNYDVRKPIGCAVLYEDDPNFNTFNFYQLNYVQRDKLTKSEINYCQNACDEAKKMICNWIEEKTVGSHNYFVIISRWTALMVWLLGYRIWFDFSYLSANHDLVDSFSRIDPLKLLGNVP