Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073605.t1 | RHN78917.1 | 94.7 | 589 | 31 | 0 | 1 | 589 | 17 | 605 | 0.00E+00 | 1112.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073605.t1 | Q10EL1 | 49.3 | 674 | 286 | 21 | 10 | 649 | 65 | 716 | 1.8e-159 | 564.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073605.t1 | A0A072TPV6 | 94.7 | 589 | 31 | 0 | 1 | 589 | 17 | 605 | 0.0e+00 | 1112.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene073605.t1 | TF | C3H |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073605.t1 | MTR_1g050438 | 94.737 | 589 | 31 | 0 | 1 | 589 | 1 | 589 | 0.0 | 1077 |
MS.gene073605.t1 | MTR_0728s0020 | 94.737 | 589 | 31 | 0 | 1 | 589 | 17 | 605 | 0.0 | 1076 |
MS.gene073605.t1 | MTR_3g029590 | 56.554 | 679 | 252 | 17 | 1 | 649 | 31 | 696 | 0.0 | 655 |
MS.gene073605.t1 | MTR_7g092070 | 53.789 | 673 | 270 | 18 | 1 | 648 | 33 | 689 | 0.0 | 623 |
MS.gene073605.t1 | MTR_3g435590 | 46.696 | 454 | 179 | 5 | 1 | 450 | 18 | 412 | 1.24e-133 | 401 |
MS.gene073605.t1 | MTR_5g082830 | 35.106 | 658 | 347 | 16 | 15 | 637 | 30 | 642 | 7.68e-115 | 359 |
MS.gene073605.t1 | MTR_5g071070 | 37.649 | 672 | 329 | 22 | 15 | 639 | 35 | 663 | 2.77e-112 | 353 |
MS.gene073605.t1 | MTR_1g075890 | 47.892 | 332 | 152 | 4 | 14 | 343 | 32 | 344 | 1.23e-100 | 321 |
MS.gene073605.t1 | MTR_5g071070 | 37.400 | 623 | 301 | 21 | 64 | 639 | 1 | 581 | 5.76e-99 | 316 |
MS.gene073605.t1 | MTR_3g435680 | 44.444 | 387 | 169 | 5 | 64 | 450 | 5 | 345 | 3.54e-98 | 306 |
MS.gene073605.t1 | MTR_3g070880 | 42.771 | 332 | 130 | 4 | 14 | 345 | 9 | 280 | 1.16e-87 | 283 |
MS.gene073605.t1 | MTR_3g464260 | 33.792 | 509 | 234 | 15 | 1 | 492 | 11 | 433 | 1.24e-71 | 241 |
MS.gene073605.t1 | MTR_3g464280 | 30.248 | 605 | 270 | 17 | 36 | 633 | 37 | 496 | 1.89e-58 | 205 |
MS.gene073605.t1 | MTR_8g102100 | 60.504 | 119 | 47 | 0 | 224 | 342 | 77 | 195 | 1.63e-49 | 177 |
MS.gene073605.t1 | MTR_6g090380 | 65.421 | 107 | 37 | 0 | 224 | 330 | 99 | 205 | 1.29e-48 | 175 |
MS.gene073605.t1 | MTR_2g090605 | 63.964 | 111 | 40 | 0 | 228 | 338 | 77 | 187 | 1.25e-47 | 173 |
MS.gene073605.t1 | MTR_3g103960 | 61.468 | 109 | 41 | 1 | 223 | 330 | 48 | 156 | 1.56e-45 | 163 |
MS.gene073605.t1 | MTR_4g078660 | 57.944 | 107 | 45 | 0 | 224 | 330 | 56 | 162 | 2.59e-43 | 158 |
MS.gene073605.t1 | MTR_3g464270 | 33.977 | 259 | 131 | 7 | 226 | 471 | 7 | 238 | 2.75e-38 | 145 |
MS.gene073605.t1 | MTR_3g464290 | 57.143 | 98 | 41 | 1 | 205 | 301 | 77 | 174 | 1.41e-33 | 134 |
MS.gene073605.t1 | MTR_1g050442 | 68.085 | 47 | 15 | 0 | 608 | 654 | 1 | 47 | 1.24e-13 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073605.t1 | AT2G41900 | 48.886 | 673 | 290 | 17 | 1 | 648 | 34 | 677 | 0.0 | 551 |
MS.gene073605.t1 | AT5G12850 | 46.657 | 658 | 300 | 22 | 5 | 639 | 32 | 661 | 4.32e-175 | 516 |
MS.gene073605.t1 | AT5G58620 | 37.188 | 640 | 314 | 14 | 12 | 632 | 11 | 581 | 2.80e-113 | 353 |
MS.gene073605.t1 | AT2G40140 | 35.780 | 654 | 282 | 19 | 15 | 648 | 33 | 568 | 1.14e-104 | 330 |
MS.gene073605.t1 | AT2G40140 | 35.780 | 654 | 282 | 19 | 15 | 648 | 33 | 568 | 1.14e-104 | 330 |
MS.gene073605.t1 | AT3G55980 | 40.431 | 418 | 192 | 10 | 15 | 422 | 30 | 400 | 4.88e-92 | 296 |
MS.gene073605.t1 | AT3G55980 | 42.458 | 358 | 164 | 5 | 15 | 367 | 97 | 417 | 1.99e-91 | 297 |
MS.gene073605.t1 | AT1G03790 | 59.155 | 142 | 50 | 3 | 206 | 343 | 64 | 201 | 1.17e-50 | 181 |
MS.gene073605.t1 | AT2G25900 | 63.636 | 110 | 40 | 0 | 224 | 333 | 86 | 195 | 1.40e-50 | 178 |
MS.gene073605.t1 | AT2G25900 | 63.636 | 110 | 40 | 0 | 224 | 333 | 86 | 195 | 1.40e-50 | 178 |
MS.gene073605.t1 | AT5G07500 | 58.678 | 121 | 50 | 0 | 210 | 330 | 34 | 154 | 3.25e-49 | 172 |
MS.gene073605.t1 | AT2G19810 | 63.964 | 111 | 40 | 0 | 224 | 334 | 74 | 184 | 6.76e-49 | 175 |
MS.gene073605.t1 | AT4G29190 | 53.472 | 144 | 66 | 1 | 224 | 367 | 75 | 217 | 2.92e-48 | 173 |
MS.gene073605.t1 | AT5G44260 | 56.204 | 137 | 53 | 2 | 198 | 333 | 36 | 166 | 3.23e-46 | 168 |
Find 160 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TACGGACCCATGGTCTTATT+TGG | 0.102678 | 1.1:+34576449 | MS.gene073605:CDS |
ACTTTCAAGCTTTGCATATT+AGG | 0.177408 | 1.1:-34575127 | None:intergenic |
CTTCAATATGCTGAGCTATT+TGG | 0.184920 | 1.1:+34575975 | MS.gene073605:CDS |
CAAGCCCCTTTCCTGAATTC+AGG | 0.251729 | 1.1:-34575529 | None:intergenic |
AATTCTTGAGAAACTTCTTT+TGG | 0.276329 | 1.1:+34575150 | MS.gene073605:CDS |
TCTGTTGATTCTTCTAGTTC+TGG | 0.291419 | 1.1:+34575220 | MS.gene073605:CDS |
AGACCACTGCCTTCGTTAAC+TGG | 0.294948 | 1.1:+34575694 | MS.gene073605:CDS |
GCATGCCTTGCCCTGAATTC+AGG | 0.298337 | 1.1:+34575518 | MS.gene073605:CDS |
TTGATGGTTGCTGCCACTTA+TGG | 0.302833 | 1.1:+34574893 | MS.gene073605:CDS |
ACAGAGAAGTTTGCATCTTC+TGG | 0.303413 | 1.1:+34576630 | MS.gene073605:CDS |
GCCCTTCACTGTGCTGCTTC+TGG | 0.307051 | 1.1:+34574995 | MS.gene073605:CDS |
TAGGCCTAGTTGTAATAAAA+AGG | 0.309683 | 1.1:+34575639 | MS.gene073605:CDS |
CTCATTCTCAAGTGCTGCTT+GGG | 0.310662 | 1.1:+34575870 | MS.gene073605:CDS |
CGATTAACGAGGCGGGGATT+TGG | 0.319247 | 1.1:+34574819 | MS.gene073605:CDS |
ATATCTGATTGGTCGGTAAA+TGG | 0.321077 | 1.1:+34576486 | MS.gene073605:CDS |
AATAGCTTAAATTTGCGAAT+TGG | 0.323983 | 1.1:-34576664 | None:intergenic |
TCCTAGTTCTTGTCGGTCTA+AGG | 0.332234 | 1.1:+34576047 | MS.gene073605:CDS |
GGCTGCTGCAATGAATCTTT+TGG | 0.332820 | 1.1:+34575771 | MS.gene073605:CDS |
TGAGCACAAAACTCCTTTGA+TGG | 0.333522 | 1.1:+34574877 | MS.gene073605:CDS |
AGCTGCAGAGTGTTAGTTCT+AGG | 0.347905 | 1.1:+34576385 | MS.gene073605:CDS |
CAGACGATGCTCATCATTCT+TGG | 0.348362 | 1.1:-34576244 | None:intergenic |
ATTTGGTACGGTCGACAAAA+AGG | 0.354016 | 1.1:+34574836 | MS.gene073605:CDS |
TCATTTGAACATAAAATCAT+TGG | 0.355518 | 1.1:+34576543 | MS.gene073605:CDS |
AAAATCCCTTCCTCAGTTGC+TGG | 0.361141 | 1.1:+34576420 | MS.gene073605:CDS |
CCAGTTGATCCATCATTTCC+TGG | 0.368573 | 1.1:+34575337 | MS.gene073605:CDS |
GGATGGGCAGCAGCACCTTA+TGG | 0.370417 | 1.1:+34575996 | MS.gene073605:CDS |
ATGAGGATGCATTGTGCATT+TGG | 0.377230 | 1.1:-34576524 | None:intergenic |
CTCAGCATATTGAAGTCTTC+AGG | 0.382631 | 1.1:-34575967 | None:intergenic |
TGGGCACAGCAAAATGTTCT+AGG | 0.387831 | 1.1:+34575889 | MS.gene073605:CDS |
GAGAATGAGATGCCATTTCC+AGG | 0.389743 | 1.1:-34575856 | None:intergenic |
TTCTCTCCGGGATGCACATA+TGG | 0.394353 | 1.1:-34575457 | None:intergenic |
CCCGTTCACAATCTCATGAT+TGG | 0.398242 | 1.1:+34575425 | MS.gene073605:CDS |
TGAGGGCTCAGTGGGGAGAT+TGG | 0.398648 | 1.1:-34576324 | None:intergenic |
ACGGACCCATGGTCTTATTT+GGG | 0.401510 | 1.1:+34576450 | MS.gene073605:CDS |
CCAGGAAATGATGGATCAAC+TGG | 0.407420 | 1.1:-34575337 | None:intergenic |
AATTCAGGAAAGGGGCTTGT+AGG | 0.407924 | 1.1:+34575533 | MS.gene073605:CDS |
GACAGCATATTAATATTTGA+TGG | 0.414693 | 1.1:-34576219 | None:intergenic |
TCTCATTCTCAAGTGCTGCT+TGG | 0.415243 | 1.1:+34575869 | MS.gene073605:CDS |
AGTCGTGTTCGATACTGATC+TGG | 0.416868 | 1.1:-34575607 | None:intergenic |
CGTCTGTTACAAGCTTCATT+TGG | 0.422225 | 1.1:+34576261 | MS.gene073605:CDS |
GTGAAATTCACATCAACATC+TGG | 0.424336 | 1.1:-34574950 | None:intergenic |
TGTATGCAAACGATGAATTT+CGG | 0.427602 | 1.1:+34575374 | MS.gene073605:CDS |
CTCCTCCGAGCCTTCTCTCC+GGG | 0.428697 | 1.1:-34575469 | None:intergenic |
GGGAATTATTCTGTAGGACT+TGG | 0.433684 | 1.1:-34576593 | None:intergenic |
ACTTGGACCCATGATATATT+AGG | 0.434404 | 1.1:-34576576 | None:intergenic |
CTGCCTTCGTTAACTGGATC+TGG | 0.440227 | 1.1:+34575700 | MS.gene073605:CDS |
GGAACAACAATGACATCAAC+AGG | 0.440277 | 1.1:-34575103 | None:intergenic |
AAGAGGTCTTCAAGATTTGA+TGG | 0.444188 | 1.1:-34576078 | None:intergenic |
AACTGGATACTGTTTATTCT+CGG | 0.446949 | 1.1:-34575320 | None:intergenic |
AACTTCTCTGTATTCGTCTC+AGG | 0.452345 | 1.1:-34576618 | None:intergenic |
AAGAAGAGCCTAATATATCA+TGG | 0.461189 | 1.1:+34576568 | MS.gene073605:CDS |
CTTCACTGTGCTGCTTCTGG+TGG | 0.465162 | 1.1:+34574998 | MS.gene073605:CDS |
AAGCCCCTTTCCTGAATTCA+GGG | 0.465251 | 1.1:-34575528 | None:intergenic |
TGGTAGTATTGATGTTATGA+AGG | 0.465621 | 1.1:+34574913 | MS.gene073605:CDS |
GAGGAAATGCAGACATTTGA+GGG | 0.466237 | 1.1:-34576341 | None:intergenic |
GACCAATCAGATATCTCATT+AGG | 0.468837 | 1.1:-34576477 | None:intergenic |
TCTCCTCCGAGCCTTCTCTC+CGG | 0.470377 | 1.1:-34575470 | None:intergenic |
CATTTGAACATAAAATCATT+GGG | 0.474936 | 1.1:+34576544 | MS.gene073605:CDS |
AACATCAATACTACCATAAG+TGG | 0.474991 | 1.1:-34574906 | None:intergenic |
AGTGTTAGTTCTAGGGAACT+TGG | 0.478364 | 1.1:+34576393 | MS.gene073605:CDS |
AACCCGGTCCTAGTTCTTGT+CGG | 0.478599 | 1.1:+34576040 | MS.gene073605:CDS |
GAGATTGGTTCAAGCCTCCT+AGG | 0.483019 | 1.1:-34576309 | None:intergenic |
TTCACTGTGCTGCTTCTGGT+GGG | 0.489511 | 1.1:+34574999 | MS.gene073605:CDS |
CTCATGGAATATTCGAGTGC+TGG | 0.497753 | 1.1:+34575578 | MS.gene073605:CDS |
TGAGGAAATGCAGACATTTG+AGG | 0.498286 | 1.1:-34576342 | None:intergenic |
GATGGAAGGAAGAGACTGAC+GGG | 0.500477 | 1.1:-34575804 | None:intergenic |
CTTGCCCTGAATTCAGGAAA+GGG | 0.500592 | 1.1:+34575524 | MS.gene073605:CDS |
ACAAAACTTCCGCAGAAAAG+AGG | 0.503653 | 1.1:-34576095 | None:intergenic |
GGTGATCCAGCAACTGAGGA+AGG | 0.503780 | 1.1:-34576426 | None:intergenic |
AGACGATGCTCATCATTCTT+GGG | 0.506035 | 1.1:-34576243 | None:intergenic |
GAAGCAAGTACCAGTAAACT+TGG | 0.508787 | 1.1:-34574743 | None:intergenic |
AGGAAAGGGGCTTGTAGGCA+TGG | 0.513477 | 1.1:+34575538 | MS.gene073605:CDS |
CAGACATTTGAGGGCTCAGT+GGG | 0.513831 | 1.1:-34576332 | None:intergenic |
GTCACCACCTTCTCCTGTGG+TGG | 0.515604 | 1.1:+34575285 | MS.gene073605:CDS |
TAGGTATTCTGACCCATCAA+TGG | 0.518940 | 1.1:+34576125 | MS.gene073605:CDS |
GAACACGACTCTGTAAAGAT+AGG | 0.519096 | 1.1:+34575620 | MS.gene073605:CDS |
ACCAGAAGCAGCACAGTGAA+GGG | 0.521479 | 1.1:-34574996 | None:intergenic |
AGGCTCGGAGGAGAGACCTT+AGG | 0.523990 | 1.1:+34575479 | MS.gene073605:CDS |
GTTAGTTGTGTCAATAGCAA+TGG | 0.528128 | 1.1:+34575073 | MS.gene073605:CDS |
TTCAAGCTTTGCATATTAGG+AGG | 0.529947 | 1.1:-34575124 | None:intergenic |
CTCCTAATGAGATATCTGAT+TGG | 0.531536 | 1.1:+34576475 | MS.gene073605:CDS |
TTCTCTGTATTCGTCTCAGG+TGG | 0.532355 | 1.1:-34576615 | None:intergenic |
TTCGAATCCACCACAGGAGA+AGG | 0.533536 | 1.1:-34575292 | None:intergenic |
CTCTGTATTCGTCTCAGGTG+GGG | 0.535371 | 1.1:-34576613 | None:intergenic |
CCAATCATGAGATTGTGAAC+GGG | 0.538143 | 1.1:-34575425 | None:intergenic |
AACAGCTTAAGTCATCCATA+AGG | 0.539235 | 1.1:-34576011 | None:intergenic |
GGTGACACTGAAGGAGGGTA+TGG | 0.540320 | 1.1:-34575268 | None:intergenic |
GCCTCTGATAATATATCTGT+TGG | 0.544875 | 1.1:+34575178 | MS.gene073605:CDS |
CACCAGAAGCAGCACAGTGA+AGG | 0.545082 | 1.1:-34574997 | None:intergenic |
CTCAGTTGCTGGATCACCTA+CGG | 0.548161 | 1.1:+34576431 | MS.gene073605:CDS |
TGCATCCCGGAGAGAAGGCT+CGG | 0.553406 | 1.1:+34575464 | MS.gene073605:CDS |
AGACCGACAAGAACTAGGAC+CGG | 0.553527 | 1.1:-34576043 | None:intergenic |
GTAGCAGCTGATTTATGTGA+AGG | 0.556334 | 1.1:-34576162 | None:intergenic |
TCCAATCATGAGATTGTGAA+CGG | 0.559478 | 1.1:-34575426 | None:intergenic |
AACGAGGCGGGGATTTGGTA+CGG | 0.561660 | 1.1:+34574824 | MS.gene073605:CDS |
GCTTCTCACAATGACTCTGA+AGG | 0.563152 | 1.1:+34574761 | MS.gene073605:CDS |
TTGGAATCTTCTCTCCGCGC+TGG | 0.563954 | 1.1:+34575934 | MS.gene073605:CDS |
TTCACTTGCGTGGCGAACAA+AGG | 0.565281 | 1.1:+34574968 | MS.gene073605:CDS |
ATATGCTGAGCTATTTGGAT+GGG | 0.567495 | 1.1:+34575980 | MS.gene073605:CDS |
CTCGGAGGAGAGACCTTAGG+AGG | 0.570887 | 1.1:+34575482 | MS.gene073605:CDS |
GCTGCAGAGTGTTAGTTCTA+GGG | 0.573492 | 1.1:+34576386 | MS.gene073605:CDS |
GCCTTAGACCGACAAGAACT+AGG | 0.575103 | 1.1:-34576048 | None:intergenic |
CTGGATCACCTACGGACCCA+TGG | 0.575262 | 1.1:+34576439 | MS.gene073605:CDS |
GTAAATTTCGAATCCACCAC+AGG | 0.575410 | 1.1:-34575298 | None:intergenic |
AATATGCTGAGCTATTTGGA+TGG | 0.579861 | 1.1:+34575979 | MS.gene073605:CDS |
TAAGTGGCAGCAACCATCAA+AGG | 0.581005 | 1.1:-34574890 | None:intergenic |
GATGCAGATGAACGTGGTGA+AGG | 0.581334 | 1.1:-34575727 | None:intergenic |
GTGAGAATTCTCATATCCGC+GGG | 0.583370 | 1.1:+34575043 | MS.gene073605:CDS |
TAGCAGCTGATTTATGTGAA+GGG | 0.583799 | 1.1:-34576161 | None:intergenic |
GTCGTGTTCGATACTGATCT+GGG | 0.586400 | 1.1:-34575606 | None:intergenic |
ATATGTGCATCCCGGAGAGA+AGG | 0.587617 | 1.1:+34575459 | MS.gene073605:CDS |
GATAAGTGTGAATATGCTCA+TGG | 0.587938 | 1.1:+34575562 | MS.gene073605:CDS |
GTGACATGCTACCGCATGAA+GGG | 0.588287 | 1.1:-34576287 | None:intergenic |
CCTTGCCCTGAATTCAGGAA+AGG | 0.589700 | 1.1:+34575523 | MS.gene073605:CDS |
AGAAGAGCCTAATATATCAT+GGG | 0.591142 | 1.1:+34576569 | MS.gene073605:CDS |
GGATGGAAGGAAGAGACTGA+CGG | 0.592111 | 1.1:-34575805 | None:intergenic |
CCTTTCCTGAATTCAGGGCA+AGG | 0.594200 | 1.1:-34575523 | None:intergenic |
TGAGATGCCATTTCCAGGAG+GGG | 0.599706 | 1.1:-34575851 | None:intergenic |
TTGCCCTGAATTCAGGAAAG+GGG | 0.599832 | 1.1:+34575525 | MS.gene073605:CDS |
AGTGTCACCACCTTCTCCTG+TGG | 0.600051 | 1.1:+34575282 | MS.gene073605:CDS |
AGCAGCTGATTTATGTGAAG+GGG | 0.600618 | 1.1:-34576160 | None:intergenic |
GACCGACAAGAACTAGGACC+GGG | 0.601622 | 1.1:-34576042 | None:intergenic |
ACAACTAACATTTGCACCCG+CGG | 0.603059 | 1.1:-34575059 | None:intergenic |
TGCTGCTGTTTCTCGCAATG+AGG | 0.606005 | 1.1:-34576360 | None:intergenic |
AGCTGTAAGAGAACCTCCTA+AGG | 0.606098 | 1.1:-34575495 | None:intergenic |
GGAGATCCCAAATAAGACCA+TGG | 0.607064 | 1.1:-34576456 | None:intergenic |
TCTCTGTATTCGTCTCAGGT+GGG | 0.607073 | 1.1:-34576614 | None:intergenic |
TCATTTGGTGTCCCTTCATG+CGG | 0.610299 | 1.1:+34576276 | MS.gene073605:CDS |
GAGTGTCCATATGTGCATCC+CGG | 0.612767 | 1.1:+34575451 | MS.gene073605:CDS |
GAGATCCCAAATAAGACCAT+GGG | 0.613346 | 1.1:-34576455 | None:intergenic |
ATGAGATGCCATTTCCAGGA+GGG | 0.614622 | 1.1:-34575852 | None:intergenic |
CAGGTGGGGAATTATTCTGT+AGG | 0.615860 | 1.1:-34576599 | None:intergenic |
GATCCAGTTAACGAAGGCAG+TGG | 0.617311 | 1.1:-34575697 | None:intergenic |
GAGATGCCATTTCCAGGAGG+GGG | 0.620888 | 1.1:-34575850 | None:intergenic |
TAATGAGATATCTGATTGGT+CGG | 0.621895 | 1.1:+34576479 | MS.gene073605:CDS |
ACCAACAGATATATTATCAG+AGG | 0.623686 | 1.1:-34575179 | None:intergenic |
AAATAAGACCATGGGTCCGT+AGG | 0.624229 | 1.1:-34576447 | None:intergenic |
CGTAGGTGATCCAGCAACTG+AGG | 0.625395 | 1.1:-34576430 | None:intergenic |
TGATGTGAATTTCACTTGCG+TGG | 0.625498 | 1.1:+34574958 | MS.gene073605:CDS |
GGTGACATGCTACCGCATGA+AGG | 0.631551 | 1.1:-34576288 | None:intergenic |
GAAGGTGGTGACACTGAAGG+AGG | 0.631733 | 1.1:-34575274 | None:intergenic |
GGAGAAGGTGGTGACACTGA+AGG | 0.632383 | 1.1:-34575277 | None:intergenic |
TTAAGCTGTTTCTCACAACC+CGG | 0.635036 | 1.1:+34576024 | MS.gene073605:CDS |
GTGATCCAGCAACTGAGGAA+GGG | 0.637371 | 1.1:-34576425 | None:intergenic |
CAGGCTGAATGTTGCCAGCG+CGG | 0.639339 | 1.1:-34575948 | None:intergenic |
GCAGACATTTGAGGGCTCAG+TGG | 0.644297 | 1.1:-34576333 | None:intergenic |
GAATCCACCACAGGAGAAGG+TGG | 0.649733 | 1.1:-34575289 | None:intergenic |
CATGCGGTAGCATGTCACCT+AGG | 0.650388 | 1.1:+34576292 | MS.gene073605:CDS |
GCGGTAGCATGTCACCTAGG+AGG | 0.656022 | 1.1:+34576295 | MS.gene073605:CDS |
TGTGAGAATTCTCATATCCG+CGG | 0.658598 | 1.1:+34575042 | MS.gene073605:CDS |
ATTGATGGGTCAGAATACCT+AGG | 0.662715 | 1.1:-34576123 | None:intergenic |
ATTGTGAACGGGAACAACGA+AGG | 0.665165 | 1.1:-34575414 | None:intergenic |
ATCCCGGAGAGAAGGCTCGG+AGG | 0.669076 | 1.1:+34575467 | MS.gene073605:CDS |
AAGGTGGTGACACTGAAGGA+GGG | 0.677347 | 1.1:-34575273 | None:intergenic |
ATGCCAGATCCAGTTAACGA+AGG | 0.701815 | 1.1:-34575703 | None:intergenic |
AAAGCAGATGCAGATGAACG+TGG | 0.708647 | 1.1:-34575733 | None:intergenic |
ATGGAAGGAAGAGACTGACG+GGG | 0.715204 | 1.1:-34575803 | None:intergenic |
AATGAGATGCCATTTCCAGG+AGG | 0.730586 | 1.1:-34575853 | None:intergenic |
TGGAAGGAAGAGACTGACGG+GGG | 0.740862 | 1.1:-34575802 | None:intergenic |
AGACATTTGAGGGCTCAGTG+GGG | 0.787595 | 1.1:-34576331 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CATTTGAACATAAAATCATT+GGG | + | chr1.1:34576544-34576563 | MS.gene073605:CDS | 20.0% |
!! | TCATTTGAACATAAAATCAT+TGG | + | chr1.1:34576543-34576562 | MS.gene073605:CDS | 20.0% |
!!! | AATGATTTTATGTTCAAATG+AGG | - | chr1.1:34576544-34576563 | None:intergenic | 20.0% |
! | GACAGCATATTAATATTTGA+TGG | - | chr1.1:34576222-34576241 | None:intergenic | 25.0% |
!! | AATTCTTGAGAAACTTCTTT+TGG | + | chr1.1:34575150-34575169 | MS.gene073605:CDS | 25.0% |
!!! | AAGCTTCTTTTAGAAAAAGA+AGG | + | chr1.1:34574788-34574807 | MS.gene073605:CDS | 25.0% |
!!! | TTTTTTATACCAGGAAATGA+TGG | - | chr1.1:34575349-34575368 | None:intergenic | 25.0% |
AAAAAACAGAAGCCATTGAT+GGG | - | chr1.1:34576140-34576159 | None:intergenic | 30.0% | |
AACATCAATACTACCATAAG+TGG | - | chr1.1:34574909-34574928 | None:intergenic | 30.0% | |
AACTGGATACTGTTTATTCT+CGG | - | chr1.1:34575323-34575342 | None:intergenic | 30.0% | |
AAGAAGAGCCTAATATATCA+TGG | + | chr1.1:34576568-34576587 | MS.gene073605:CDS | 30.0% | |
ACCAACAGATATATTATCAG+AGG | - | chr1.1:34575182-34575201 | None:intergenic | 30.0% | |
ACTTTCAAGCTTTGCATATT+AGG | - | chr1.1:34575130-34575149 | None:intergenic | 30.0% | |
AGAAGAGCCTAATATATCAT+GGG | + | chr1.1:34576569-34576588 | MS.gene073605:CDS | 30.0% | |
ATAGGCTGGGAAAAATTATA+TGG | - | chr1.1:34575829-34575848 | None:intergenic | 30.0% | |
GGAAAAATTATATGGATGGA+AGG | - | chr1.1:34575821-34575840 | None:intergenic | 30.0% | |
TAATGAGATATCTGATTGGT+CGG | + | chr1.1:34576479-34576498 | MS.gene073605:CDS | 30.0% | |
TAGGCCTAGTTGTAATAAAA+AGG | + | chr1.1:34575639-34575658 | MS.gene073605:CDS | 30.0% | |
TGTATGCAAACGATGAATTT+CGG | + | chr1.1:34575374-34575393 | MS.gene073605:CDS | 30.0% | |
! | ATTTCGGATGTTTTCTTTCA+AGG | + | chr1.1:34575390-34575409 | MS.gene073605:CDS | 30.0% |
! | CACACCTTTTTATTACAACT+AGG | - | chr1.1:34575646-34575665 | None:intergenic | 30.0% |
! | GAAGCAATTTTCAATCTAGT+CGG | + | chr1.1:34575911-34575930 | MS.gene073605:CDS | 30.0% |
!! | TGGTAGTATTGATGTTATGA+AGG | + | chr1.1:34574913-34574932 | MS.gene073605:CDS | 30.0% |
!!! | TACATGCTGTTTTTTATACC+AGG | - | chr1.1:34575358-34575377 | None:intergenic | 30.0% |
!!! | TTTTTTTGCACACGATGAAA+AGG | + | chr1.1:34575666-34575685 | MS.gene073605:CDS | 30.0% |
AACAGCTTAAGTCATCCATA+AGG | - | chr1.1:34576014-34576033 | None:intergenic | 35.0% | |
AAGAGGTCTTCAAGATTTGA+TGG | - | chr1.1:34576081-34576100 | None:intergenic | 35.0% | |
AATATGCTGAGCTATTTGGA+TGG | + | chr1.1:34575979-34575998 | MS.gene073605:CDS | 35.0% | |
ACTTGGACCCATGATATATT+AGG | - | chr1.1:34576579-34576598 | None:intergenic | 35.0% | |
ATATGCTGAGCTATTTGGAT+GGG | + | chr1.1:34575980-34575999 | MS.gene073605:CDS | 35.0% | |
CTCCTAATGAGATATCTGAT+TGG | + | chr1.1:34576475-34576494 | MS.gene073605:CDS | 35.0% | |
CTTCAATATGCTGAGCTATT+TGG | + | chr1.1:34575975-34575994 | MS.gene073605:CDS | 35.0% | |
GAAAAAACAGAAGCCATTGA+TGG | - | chr1.1:34576141-34576160 | None:intergenic | 35.0% | |
GACCAATCAGATATCTCATT+AGG | - | chr1.1:34576480-34576499 | None:intergenic | 35.0% | |
GATAAGTGTGAATATGCTCA+TGG | + | chr1.1:34575562-34575581 | MS.gene073605:CDS | 35.0% | |
GCCTCTGATAATATATCTGT+TGG | + | chr1.1:34575178-34575197 | MS.gene073605:CDS | 35.0% | |
GCTGGGAAAAATTATATGGA+TGG | - | chr1.1:34575825-34575844 | None:intergenic | 35.0% | |
GTGAAATTCACATCAACATC+TGG | - | chr1.1:34574953-34574972 | None:intergenic | 35.0% | |
GTTAGTTGTGTCAATAGCAA+TGG | + | chr1.1:34575073-34575092 | MS.gene073605:CDS | 35.0% | |
TCCAATCATGAGATTGTGAA+CGG | - | chr1.1:34575429-34575448 | None:intergenic | 35.0% | |
TTCAAGCTTTGCATATTAGG+AGG | - | chr1.1:34575127-34575146 | None:intergenic | 35.0% | |
! | AGACTCTTTTCCAAGTTTAC+TGG | + | chr1.1:34574733-34574752 | MS.gene073605:CDS | 35.0% |
! | ATATCTGATTGGTCGGTAAA+TGG | + | chr1.1:34576486-34576505 | MS.gene073605:CDS | 35.0% |
! | CAATTTTCAATCTAGTCGGT+TGG | + | chr1.1:34575915-34575934 | MS.gene073605:CDS | 35.0% |
! | TAGCAGCTGATTTATGTGAA+GGG | - | chr1.1:34576164-34576183 | None:intergenic | 35.0% |
! | TGCTTTTAATGCGATGGAAT+TGG | + | chr1.1:34575750-34575769 | MS.gene073605:CDS | 35.0% |
!! | TCTGTTGATTCTTCTAGTTC+TGG | + | chr1.1:34575220-34575239 | MS.gene073605:CDS | 35.0% |
AACTTCTCTGTATTCGTCTC+AGG | - | chr1.1:34576621-34576640 | None:intergenic | 40.0% | |
ACAAAACTTCCGCAGAAAAG+AGG | - | chr1.1:34576098-34576117 | None:intergenic | 40.0% | |
ACAGAGAAGTTTGCATCTTC+TGG | + | chr1.1:34576630-34576649 | MS.gene073605:CDS | 40.0% | |
AGACGATGCTCATCATTCTT+GGG | - | chr1.1:34576246-34576265 | None:intergenic | 40.0% | |
ATGAGGATGCATTGTGCATT+TGG | - | chr1.1:34576527-34576546 | None:intergenic | 40.0% | |
ATTTGGTACGGTCGACAAAA+AGG | + | chr1.1:34574836-34574855 | MS.gene073605:CDS | 40.0% | |
CCAATCATGAGATTGTGAAC+GGG | - | chr1.1:34575428-34575447 | None:intergenic | 40.0% | |
CGTCTGTTACAAGCTTCATT+TGG | + | chr1.1:34576261-34576280 | MS.gene073605:CDS | 40.0% | |
CTCAGCATATTGAAGTCTTC+AGG | - | chr1.1:34575970-34575989 | None:intergenic | 40.0% | |
GAACACGACTCTGTAAAGAT+AGG | + | chr1.1:34575620-34575639 | MS.gene073605:CDS | 40.0% | |
GAAGCAAGTACCAGTAAACT+TGG | - | chr1.1:34574746-34574765 | None:intergenic | 40.0% | |
GAGATCCCAAATAAGACCAT+GGG | - | chr1.1:34576458-34576477 | None:intergenic | 40.0% | |
GAGGAAATGCAGACATTTGA+GGG | - | chr1.1:34576344-34576363 | None:intergenic | 40.0% | |
GGAACAACAATGACATCAAC+AGG | - | chr1.1:34575106-34575125 | None:intergenic | 40.0% | |
GGGAATTATTCTGTAGGACT+TGG | - | chr1.1:34576596-34576615 | None:intergenic | 40.0% | |
GTAAATTTCGAATCCACCAC+AGG | - | chr1.1:34575301-34575320 | None:intergenic | 40.0% | |
TAGGTATTCTGACCCATCAA+TGG | + | chr1.1:34576125-34576144 | MS.gene073605:CDS | 40.0% | |
TGAGCACAAAACTCCTTTGA+TGG | + | chr1.1:34574877-34574896 | MS.gene073605:CDS | 40.0% | |
TGAGGAAATGCAGACATTTG+AGG | - | chr1.1:34576345-34576364 | None:intergenic | 40.0% | |
TGATGTGAATTTCACTTGCG+TGG | + | chr1.1:34574958-34574977 | MS.gene073605:CDS | 40.0% | |
TGTGAGAATTCTCATATCCG+CGG | + | chr1.1:34575042-34575061 | MS.gene073605:CDS | 40.0% | |
! | AGCAGCTGATTTATGTGAAG+GGG | - | chr1.1:34576163-34576182 | None:intergenic | 40.0% |
! | ATTGATGGGTCAGAATACCT+AGG | - | chr1.1:34576126-34576145 | None:intergenic | 40.0% |
! | GCTGCAATGAATCTTTTGGT+CGG | + | chr1.1:34575775-34575794 | MS.gene073605:CDS | 40.0% |
! | GTAGCAGCTGATTTATGTGA+AGG | - | chr1.1:34576165-34576184 | None:intergenic | 40.0% |
! | TCTTGAAGACCTCTTTTCTG+CGG | + | chr1.1:34576086-34576105 | MS.gene073605:CDS | 40.0% |
!! | AGTGTTAGTTCTAGGGAACT+TGG | + | chr1.1:34576393-34576412 | MS.gene073605:CDS | 40.0% |
!! | TGCATCTGCTTTTAATGCGA+TGG | + | chr1.1:34575744-34575763 | MS.gene073605:CDS | 40.0% |
!! | TTAAGCTGTTTCTCACAACC+CGG | + | chr1.1:34576024-34576043 | MS.gene073605:CDS | 40.0% |
!!! | AGCTTTTTCGATTAACGAGG+CGG | + | chr1.1:34574811-34574830 | MS.gene073605:CDS | 40.0% |
!!! | AGGAGCTTTTTCGATTAACG+AGG | + | chr1.1:34574808-34574827 | MS.gene073605:CDS | 40.0% |
AAAATCCCTTCCTCAGTTGC+TGG | + | chr1.1:34576420-34576439 | MS.gene073605:CDS | 45.0% | |
AAAGCAGATGCAGATGAACG+TGG | - | chr1.1:34575736-34575755 | None:intergenic | 45.0% | |
AAATAAGACCATGGGTCCGT+AGG | - | chr1.1:34576450-34576469 | None:intergenic | 45.0% | |
AAGCCCCTTTCCTGAATTCA+GGG | - | chr1.1:34575531-34575550 | None:intergenic | 45.0% | |
AATTCAGGAAAGGGGCTTGT+AGG | + | chr1.1:34575533-34575552 | MS.gene073605:CDS | 45.0% | |
ACAACTAACATTTGCACCCG+CGG | - | chr1.1:34575062-34575081 | None:intergenic | 45.0% | |
AGCTGTAAGAGAACCTCCTA+AGG | - | chr1.1:34575498-34575517 | None:intergenic | 45.0% | |
AGTCGTGTTCGATACTGATC+TGG | - | chr1.1:34575610-34575629 | None:intergenic | 45.0% | |
ATGCCAGATCCAGTTAACGA+AGG | - | chr1.1:34575706-34575725 | None:intergenic | 45.0% | |
ATTGTGAACGGGAACAACGA+AGG | - | chr1.1:34575417-34575436 | None:intergenic | 45.0% | |
CAGACGATGCTCATCATTCT+TGG | - | chr1.1:34576247-34576266 | None:intergenic | 45.0% | |
CAGGTGGGGAATTATTCTGT+AGG | - | chr1.1:34576602-34576621 | None:intergenic | 45.0% | |
CCAGTTGATCCATCATTTCC+TGG | + | chr1.1:34575337-34575356 | MS.gene073605:CDS | 45.0% | |
CCCGTTCACAATCTCATGAT+TGG | + | chr1.1:34575425-34575444 | MS.gene073605:CDS | 45.0% | |
CGGTCGACAAAAAGGTTCTA+CGG | + | chr1.1:34574844-34574863 | MS.gene073605:CDS | 45.0% | |
CTCATGGAATATTCGAGTGC+TGG | + | chr1.1:34575578-34575597 | MS.gene073605:CDS | 45.0% | |
CTTGCCCTGAATTCAGGAAA+GGG | + | chr1.1:34575524-34575543 | MS.gene073605:CDS | 45.0% | |
GCTTCTCACAATGACTCTGA+AGG | + | chr1.1:34574761-34574780 | MS.gene073605:CDS | 45.0% | |
GGAGATCCCAAATAAGACCA+TGG | - | chr1.1:34576459-34576478 | None:intergenic | 45.0% | |
GTCGTGTTCGATACTGATCT+GGG | - | chr1.1:34575609-34575628 | None:intergenic | 45.0% | |
GTGAGAATTCTCATATCCGC+GGG | + | chr1.1:34575043-34575062 | MS.gene073605:CDS | 45.0% | |
TAAGTGGCAGCAACCATCAA+AGG | - | chr1.1:34574893-34574912 | None:intergenic | 45.0% | |
TCTCTGTATTCGTCTCAGGT+GGG | - | chr1.1:34576617-34576636 | None:intergenic | 45.0% | |
TGGGCACAGCAAAATGTTCT+AGG | + | chr1.1:34575889-34575908 | MS.gene073605:CDS | 45.0% | |
TTCTCTGTATTCGTCTCAGG+TGG | - | chr1.1:34576618-34576637 | None:intergenic | 45.0% | |
TTGCCCTGAATTCAGGAAAG+GGG | + | chr1.1:34575525-34575544 | MS.gene073605:CDS | 45.0% | |
! | AATGAGATGCCATTTCCAGG+AGG | - | chr1.1:34575856-34575875 | None:intergenic | 45.0% |
! | AGCTGCAGAGTGTTAGTTCT+AGG | + | chr1.1:34576385-34576404 | MS.gene073605:CDS | 45.0% |
! | ATGAGATGCCATTTCCAGGA+GGG | - | chr1.1:34575855-34575874 | None:intergenic | 45.0% |
! | GAGAATGAGATGCCATTTCC+AGG | - | chr1.1:34575859-34575878 | None:intergenic | 45.0% |
! | GGCTGCTGCAATGAATCTTT+TGG | + | chr1.1:34575771-34575790 | MS.gene073605:CDS | 45.0% |
! | TCCTAGTTCTTGTCGGTCTA+AGG | + | chr1.1:34576047-34576066 | MS.gene073605:CDS | 45.0% |
! | TCTCATTCTCAAGTGCTGCT+TGG | + | chr1.1:34575869-34575888 | MS.gene073605:CDS | 45.0% |
! | TTGATGGTTGCTGCCACTTA+TGG | + | chr1.1:34574893-34574912 | MS.gene073605:CDS | 45.0% |
!! | ACGGACCCATGGTCTTATTT+GGG | + | chr1.1:34576450-34576469 | MS.gene073605:CDS | 45.0% |
!! | CCAGGAAATGATGGATCAAC+TGG | - | chr1.1:34575340-34575359 | None:intergenic | 45.0% |
!! | CGGAAGTTTTGTCATCTCCT+AGG | + | chr1.1:34576106-34576125 | MS.gene073605:CDS | 45.0% |
!! | CTCATTCTCAAGTGCTGCTT+GGG | + | chr1.1:34575870-34575889 | MS.gene073605:CDS | 45.0% |
!! | GCTGCAGAGTGTTAGTTCTA+GGG | + | chr1.1:34576386-34576405 | MS.gene073605:CDS | 45.0% |
!! | TACGGACCCATGGTCTTATT+TGG | + | chr1.1:34576449-34576468 | MS.gene073605:CDS | 45.0% |
!! | TCATTTGGTGTCCCTTCATG+CGG | + | chr1.1:34576276-34576295 | MS.gene073605:CDS | 45.0% |
!!! | CTTTTTCGATTAACGAGGCG+GGG | + | chr1.1:34574813-34574832 | MS.gene073605:CDS | 45.0% |
!!! | GCTTTTTCGATTAACGAGGC+GGG | + | chr1.1:34574812-34574831 | MS.gene073605:CDS | 45.0% |
AAGGTGGTGACACTGAAGGA+GGG | - | chr1.1:34575276-34575295 | None:intergenic | 50.0% | |
ACCAGAAGCAGCACAGTGAA+GGG | - | chr1.1:34574999-34575018 | None:intergenic | 50.0% | |
AGACATTTGAGGGCTCAGTG+GGG | - | chr1.1:34576334-34576353 | None:intergenic | 50.0% | |
AGACCACTGCCTTCGTTAAC+TGG | + | chr1.1:34575694-34575713 | MS.gene073605:CDS | 50.0% | |
AGACCGACAAGAACTAGGAC+CGG | - | chr1.1:34576046-34576065 | None:intergenic | 50.0% | |
ATATGTGCATCCCGGAGAGA+AGG | + | chr1.1:34575459-34575478 | MS.gene073605:CDS | 50.0% | |
ATGGAAGGAAGAGACTGACG+GGG | - | chr1.1:34575806-34575825 | None:intergenic | 50.0% | |
CAAGCCCCTTTCCTGAATTC+AGG | - | chr1.1:34575532-34575551 | None:intergenic | 50.0% | |
CAGACATTTGAGGGCTCAGT+GGG | - | chr1.1:34576335-34576354 | None:intergenic | 50.0% | |
CCTTGCCCTGAATTCAGGAA+AGG | + | chr1.1:34575523-34575542 | MS.gene073605:CDS | 50.0% | |
CCTTTCCTGAATTCAGGGCA+AGG | - | chr1.1:34575526-34575545 | None:intergenic | 50.0% | |
CTCAGTTGCTGGATCACCTA+CGG | + | chr1.1:34576431-34576450 | MS.gene073605:CDS | 50.0% | |
CTCTGTATTCGTCTCAGGTG+GGG | - | chr1.1:34576616-34576635 | None:intergenic | 50.0% | |
CTGCCTTCGTTAACTGGATC+TGG | + | chr1.1:34575700-34575719 | MS.gene073605:CDS | 50.0% | |
GAGTGTCCATATGTGCATCC+CGG | + | chr1.1:34575451-34575470 | MS.gene073605:CDS | 50.0% | |
GATCCAGTTAACGAAGGCAG+TGG | - | chr1.1:34575700-34575719 | None:intergenic | 50.0% | |
GATGCAGATGAACGTGGTGA+AGG | - | chr1.1:34575730-34575749 | None:intergenic | 50.0% | |
GATGGAAGGAAGAGACTGAC+GGG | - | chr1.1:34575807-34575826 | None:intergenic | 50.0% | |
GCCTTAGACCGACAAGAACT+AGG | - | chr1.1:34576051-34576070 | None:intergenic | 50.0% | |
GGATGGAAGGAAGAGACTGA+CGG | - | chr1.1:34575808-34575827 | None:intergenic | 50.0% | |
GTGACATGCTACCGCATGAA+GGG | - | chr1.1:34576290-34576309 | None:intergenic | 50.0% | |
GTGATCCAGCAACTGAGGAA+GGG | - | chr1.1:34576428-34576447 | None:intergenic | 50.0% | |
TTCACTTGCGTGGCGAACAA+AGG | + | chr1.1:34574968-34574987 | MS.gene073605:CDS | 50.0% | |
TTCGAATCCACCACAGGAGA+AGG | - | chr1.1:34575295-34575314 | None:intergenic | 50.0% | |
TTCTCTCCGGGATGCACATA+TGG | - | chr1.1:34575460-34575479 | None:intergenic | 50.0% | |
! | AACCCGGTCCTAGTTCTTGT+CGG | + | chr1.1:34576040-34576059 | MS.gene073605:CDS | 50.0% |
! | GAGATTGGTTCAAGCCTCCT+AGG | - | chr1.1:34576312-34576331 | None:intergenic | 50.0% |
! | TGAGATGCCATTTCCAGGAG+GGG | - | chr1.1:34575854-34575873 | None:intergenic | 50.0% |
!! | TGCTGCTGTTTCTCGCAATG+AGG | - | chr1.1:34576363-34576382 | None:intergenic | 50.0% |
!! | TTCACTGTGCTGCTTCTGGT+GGG | + | chr1.1:34574999-34575018 | MS.gene073605:CDS | 50.0% |
AGGAAAGGGGCTTGTAGGCA+TGG | + | chr1.1:34575538-34575557 | MS.gene073605:CDS | 55.0% | |
AGTGTCACCACCTTCTCCTG+TGG | + | chr1.1:34575282-34575301 | MS.gene073605:CDS | 55.0% | |
CACCAGAAGCAGCACAGTGA+AGG | - | chr1.1:34575000-34575019 | None:intergenic | 55.0% | |
CATGCGGTAGCATGTCACCT+AGG | + | chr1.1:34576292-34576311 | MS.gene073605:CDS | 55.0% | |
CGATTAACGAGGCGGGGATT+TGG | + | chr1.1:34574819-34574838 | MS.gene073605:CDS | 55.0% | |
CGTAGGTGATCCAGCAACTG+AGG | - | chr1.1:34576433-34576452 | None:intergenic | 55.0% | |
GAAGGTGGTGACACTGAAGG+AGG | - | chr1.1:34575277-34575296 | None:intergenic | 55.0% | |
GAATCCACCACAGGAGAAGG+TGG | - | chr1.1:34575292-34575311 | None:intergenic | 55.0% | |
GACCGACAAGAACTAGGACC+GGG | - | chr1.1:34576045-34576064 | None:intergenic | 55.0% | |
GCAGACATTTGAGGGCTCAG+TGG | - | chr1.1:34576336-34576355 | None:intergenic | 55.0% | |
GCATGCCTTGCCCTGAATTC+AGG | + | chr1.1:34575518-34575537 | MS.gene073605:CDS | 55.0% | |
GGAGAAGGTGGTGACACTGA+AGG | - | chr1.1:34575280-34575299 | None:intergenic | 55.0% | |
GGTGACACTGAAGGAGGGTA+TGG | - | chr1.1:34575271-34575290 | None:intergenic | 55.0% | |
GGTGACATGCTACCGCATGA+AGG | - | chr1.1:34576291-34576310 | None:intergenic | 55.0% | |
GGTGATCCAGCAACTGAGGA+AGG | - | chr1.1:34576429-34576448 | None:intergenic | 55.0% | |
TGGAAGGAAGAGACTGACGG+GGG | - | chr1.1:34575805-34575824 | None:intergenic | 55.0% | |
TTGGAATCTTCTCTCCGCGC+TGG | + | chr1.1:34575934-34575953 | MS.gene073605:CDS | 55.0% | |
! | AACGAGGCGGGGATTTGGTA+CGG | + | chr1.1:34574824-34574843 | MS.gene073605:CDS | 55.0% |
! | GAGATGCCATTTCCAGGAGG+GGG | - | chr1.1:34575853-34575872 | None:intergenic | 55.0% |
!! | CTTCACTGTGCTGCTTCTGG+TGG | + | chr1.1:34574998-34575017 | MS.gene073605:CDS | 55.0% |
AGGCTCGGAGGAGAGACCTT+AGG | + | chr1.1:34575479-34575498 | MS.gene073605:CDS | 60.0% | |
CAGGCTGAATGTTGCCAGCG+CGG | - | chr1.1:34575951-34575970 | None:intergenic | 60.0% | |
CCTATGCCCCCTCCTGGAAA+TGG | + | chr1.1:34575844-34575863 | MS.gene073605:CDS | 60.0% | |
CTCGGAGGAGAGACCTTAGG+AGG | + | chr1.1:34575482-34575501 | MS.gene073605:CDS | 60.0% | |
CTGGATCACCTACGGACCCA+TGG | + | chr1.1:34576439-34576458 | MS.gene073605:CDS | 60.0% | |
GCGGTAGCATGTCACCTAGG+AGG | + | chr1.1:34576295-34576314 | MS.gene073605:CDS | 60.0% | |
GGATGGGCAGCAGCACCTTA+TGG | + | chr1.1:34575996-34576015 | MS.gene073605:CDS | 60.0% | |
GTCACCACCTTCTCCTGTGG+TGG | + | chr1.1:34575285-34575304 | MS.gene073605:CDS | 60.0% | |
TCTCCTCCGAGCCTTCTCTC+CGG | - | chr1.1:34575473-34575492 | None:intergenic | 60.0% | |
TGAGGGCTCAGTGGGGAGAT+TGG | - | chr1.1:34576327-34576346 | None:intergenic | 60.0% | |
TGCATCCCGGAGAGAAGGCT+CGG | + | chr1.1:34575464-34575483 | MS.gene073605:CDS | 60.0% | |
! | CCATTTCCAGGAGGGGGCAT+AGG | - | chr1.1:34575847-34575866 | None:intergenic | 60.0% |
!! | GCCCTTCACTGTGCTGCTTC+TGG | + | chr1.1:34574995-34575014 | MS.gene073605:CDS | 60.0% |
ATCCCGGAGAGAAGGCTCGG+AGG | + | chr1.1:34575467-34575486 | MS.gene073605:CDS | 65.0% | |
CTCCTCCGAGCCTTCTCTCC+GGG | - | chr1.1:34575472-34575491 | None:intergenic | 65.0% | |
! | TCCAGGAGGGGGCATAGGCT+GGG | - | chr1.1:34575842-34575861 | None:intergenic | 65.0% |
! | TTCCAGGAGGGGGCATAGGC+TGG | - | chr1.1:34575843-34575862 | None:intergenic | 65.0% |
TCCCAGCCTATGCCCCCTCC+TGG | + | chr1.1:34575838-34575857 | MS.gene073605:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 34574707 | 34576680 | 34574707 | ID=MS.gene073605 |
chr1.1 | mRNA | 34574707 | 34576680 | 34574707 | ID=MS.gene073605.t1;Parent=MS.gene073605 |
chr1.1 | exon | 34574707 | 34576680 | 34574707 | ID=MS.gene073605.t1.exon1;Parent=MS.gene073605.t1 |
chr1.1 | CDS | 34574707 | 34576680 | 34574707 | ID=cds.MS.gene073605.t1;Parent=MS.gene073605.t1 |
Gene Sequence |
Protein sequence |