AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene07371

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07371.t1 MTR_1g085770 65.372 309 36 6 1 250 1 297 6.24e-116 337
MS.gene07371.t1 MTR_1g085880 86.341 205 16 2 1 204 1 194 2.57e-111 321
MS.gene07371.t1 MTR_5g088610 53.313 332 74 11 2 278 3 308 9.92e-88 267
MS.gene07371.t1 MTR_5g088080 57.851 242 74 8 12 236 13 243 1.14e-78 241
MS.gene07371.t1 MTR_5g088150 57.851 242 74 8 12 236 13 243 1.14e-78 241
MS.gene07371.t1 MTR_5g488210 57.851 242 74 8 12 236 13 243 1.14e-78 241
MS.gene07371.t1 MTR_5g088640 53.846 273 91 10 12 259 13 275 2.85e-77 238
MS.gene07371.t1 MTR_5g062790 52.381 273 73 9 12 237 10 272 7.10e-76 235
MS.gene07371.t1 MTR_5g488170 57.080 226 72 6 12 222 13 228 1.22e-74 230
MS.gene07371.t1 MTR_4g128190 46.693 257 92 11 1 237 1 232 2.19e-58 188
MS.gene07371.t1 MTR_8g042410 40.500 200 103 7 11 197 37 233 5.66e-39 144
MS.gene07371.t1 MTR_1g083630 46.842 190 92 6 10 193 11 197 2.21e-38 144
MS.gene07371.t1 MTR_1g021230 46.591 176 78 7 11 179 57 223 1.13e-37 139
MS.gene07371.t1 MTR_3g052430 56.897 116 48 2 11 126 41 154 1.51e-37 140
MS.gene07371.t1 MTR_3g052450 56.034 116 49 2 11 126 40 153 6.64e-37 139
MS.gene07371.t1 MTR_4g091490 52.893 121 54 3 8 127 10 128 7.58e-36 133
MS.gene07371.t1 MTR_2g011660 54.701 117 50 3 8 123 10 124 2.15e-35 131
MS.gene07371.t1 MTR_3g011610 48.819 127 62 3 11 136 37 161 2.39e-35 134
MS.gene07371.t1 MTR_2g089620 54.386 114 49 3 11 123 12 123 7.29e-35 129
MS.gene07371.t1 MTR_2g088170 55.932 118 50 2 11 128 29 144 9.96e-35 132
MS.gene07371.t1 MTR_7g110830 43.750 160 85 4 4 162 5 160 1.61e-34 129
MS.gene07371.t1 MTR_1g017000 34.043 235 134 9 9 234 10 232 6.70e-34 125
MS.gene07371.t1 MTR_4g065017 54.128 109 48 2 7 115 13 119 1.14e-33 126
MS.gene07371.t1 MTR_1g085040 50.413 121 57 3 4 123 5 123 2.05e-33 126
MS.gene07371.t1 MTR_5g029840 56.190 105 44 2 11 115 12 114 3.18e-33 125
MS.gene07371.t1 MTR_1g076150 53.333 105 47 2 11 115 12 114 7.38e-33 122
MS.gene07371.t1 MTR_5g007370 52.174 115 52 3 11 124 12 124 1.04e-32 123
MS.gene07371.t1 MTR_3g077110 47.692 130 60 4 9 132 10 137 1.44e-32 124
MS.gene07371.t1 MTR_1g085640 41.250 160 85 5 4 162 5 156 1.58e-32 124
MS.gene07371.t1 MTR_8g017440 48.387 124 60 4 4 125 5 126 2.46e-32 123
MS.gene07371.t1 MTR_7g115650 50.476 105 50 2 11 115 12 114 3.02e-32 119
MS.gene07371.t1 MTR_3g074520 50.435 115 54 3 11 124 12 124 3.15e-32 123
MS.gene07371.t1 MTR_7g076740 50.427 117 54 4 9 123 10 124 4.43e-32 121
MS.gene07371.t1 MTR_2g097910 53.333 105 47 2 11 115 20 122 4.49e-32 122
MS.gene07371.t1 MTR_4g478180 51.754 114 52 3 11 123 13 124 5.51e-32 122
MS.gene07371.t1 MTR_7g111290 53.271 107 48 2 4 110 5 109 5.93e-32 123
MS.gene07371.t1 MTR_1g112760 47.934 121 60 3 4 123 6 124 8.70e-32 119
MS.gene07371.t1 MTR_3g028740 50.000 110 53 2 6 115 17 124 1.83e-31 120
MS.gene07371.t1 MTR_1g043080 50.467 107 51 2 9 115 10 114 1.92e-31 119
MS.gene07371.t1 MTR_1g100653 46.847 111 57 2 11 121 12 120 1.95e-31 119
MS.gene07371.t1 MTR_4g121460 41.566 166 84 5 11 165 12 175 3.18e-31 120
MS.gene07371.t1 MTR_3g461490 49.565 115 55 3 11 124 12 124 3.82e-31 119
MS.gene07371.t1 MTR_4g105130 47.107 121 61 3 4 123 5 123 3.93e-31 120
MS.gene07371.t1 MTR_2g064160 42.657 143 73 4 1 142 1 135 9.35e-31 118
MS.gene07371.t1 MTR_8g095390 50.926 108 51 2 17 123 17 123 1.47e-30 117
MS.gene07371.t1 MTR_1g043050 50.467 107 51 2 9 115 10 114 1.50e-30 116
MS.gene07371.t1 MTR_0251s0050 46.789 109 56 2 11 119 13 119 1.54e-30 117
MS.gene07371.t1 MTR_0008s0390 43.066 137 68 4 11 147 13 139 1.66e-30 116
MS.gene07371.t1 MTR_2g089450 50.476 105 50 2 11 115 12 114 1.90e-30 115
MS.gene07371.t1 MTR_8g098860 46.957 115 59 2 4 118 5 117 3.33e-30 117
MS.gene07371.t1 MTR_2g099740 46.281 121 62 3 4 123 5 123 3.53e-30 118
MS.gene07371.t1 MTR_6g006030 45.455 121 64 2 11 131 14 132 3.59e-30 114
MS.gene07371.t1 MTR_4g082290 47.368 114 57 3 11 123 12 123 4.29e-30 118
MS.gene07371.t1 MTR_1g017140 52.830 106 47 3 11 115 12 115 4.53e-30 117
MS.gene07371.t1 MTR_5g010020 48.148 108 54 2 4 111 5 110 5.16e-30 117
MS.gene07371.t1 MTR_1g110460 33.195 241 117 9 11 225 26 248 6.13e-30 116
MS.gene07371.t1 MTR_4g073420 49.074 108 53 2 17 123 17 123 6.23e-30 115
MS.gene07371.t1 MTR_8g017500 45.455 121 63 3 4 123 5 123 6.67e-30 117
MS.gene07371.t1 MTR_4g082230 46.957 115 58 3 10 123 11 123 6.96e-30 117
MS.gene07371.t1 MTR_0008s0470 41.379 145 68 4 11 147 13 148 7.28e-30 115
MS.gene07371.t1 MTR_7g011170 46.087 115 59 3 11 124 12 124 8.38e-30 115
MS.gene07371.t1 MTR_5g014990 51.887 106 48 3 11 115 12 115 8.64e-30 115
MS.gene07371.t1 MTR_6g009430 43.262 141 76 4 11 149 12 150 9.05e-30 116
MS.gene07371.t1 MTR_7g035075 49.057 106 52 2 11 116 14 117 9.48e-30 113
MS.gene07371.t1 MTR_5g079670 36.364 154 95 3 1 153 1 152 1.21e-29 112
MS.gene07371.t1 MTR_0008s0280 50.000 104 50 2 12 115 13 114 1.37e-29 113
MS.gene07371.t1 MTR_3g097450 49.074 108 53 2 17 123 17 123 1.38e-29 115
MS.gene07371.t1 MTR_8g017540 47.321 112 57 2 4 115 51 160 1.70e-29 116
MS.gene07371.t1 MTR_1g086530 47.706 109 55 2 11 119 33 139 2.30e-29 114
MS.gene07371.t1 MTR_2g095520 53.922 102 44 3 11 111 12 111 2.77e-29 114
MS.gene07371.t1 MTR_4g097570 53.465 101 44 3 11 110 12 110 3.36e-29 114
MS.gene07371.t1 MTR_4g057635 51.887 106 48 3 11 115 12 115 3.37e-29 114
MS.gene07371.t1 MTR_6g012690 45.217 115 60 3 11 124 12 124 5.06e-29 114
MS.gene07371.t1 MTR_7g087130 49.524 105 51 2 11 115 12 114 7.88e-29 114
MS.gene07371.t1 MTR_8g031360 48.598 107 52 3 11 116 13 117 9.10e-29 112
MS.gene07371.t1 MTR_6g012180 50.495 101 48 2 11 111 12 110 9.63e-29 113
MS.gene07371.t1 MTR_2g089420 41.259 143 68 3 1 143 1 127 1.17e-28 115
MS.gene07371.t1 MTR_7g102110 50.943 106 49 3 11 115 12 115 1.26e-28 111
MS.gene07371.t1 MTR_3g103570 42.759 145 73 5 11 149 12 152 1.32e-28 113
MS.gene07371.t1 MTR_0140s0030 50.000 106 50 3 11 115 13 116 1.39e-28 113
MS.gene07371.t1 MTR_0489s0020 50.000 106 50 3 11 115 13 116 1.39e-28 113
MS.gene07371.t1 MTR_8g020490 49.515 103 50 2 9 111 6 106 2.16e-28 110
MS.gene07371.t1 MTR_6g090405 47.321 112 56 3 10 120 11 120 3.01e-28 110
MS.gene07371.t1 MTR_1g073170 46.429 112 58 2 4 115 13 122 3.08e-28 110
MS.gene07371.t1 MTR_1g100667 49.541 109 53 2 7 115 9 115 3.41e-28 110
MS.gene07371.t1 MTR_3g039990 48.571 105 52 2 11 115 13 115 3.91e-28 111
MS.gene07371.t1 MTR_7g096930 47.619 105 53 2 11 115 12 114 6.40e-28 110
MS.gene07371.t1 MTR_8g027345 49.505 101 49 2 11 111 12 110 7.09e-28 110
MS.gene07371.t1 MTR_7g010210 47.619 105 53 2 11 115 12 114 8.12e-28 109
MS.gene07371.t1 MTR_7g010210 47.619 105 53 2 11 115 12 114 1.32e-27 110
MS.gene07371.t1 MTR_4g128670 50.980 102 47 3 11 111 12 111 1.33e-27 110
MS.gene07371.t1 MTR_8g017340 42.254 142 73 5 4 138 5 144 1.36e-27 112
MS.gene07371.t1 MTR_7g117730 46.316 95 50 1 17 111 17 110 1.37e-27 108
MS.gene07371.t1 MTR_4g097570 52.941 102 44 4 11 110 12 111 1.38e-27 109
MS.gene07371.t1 MTR_3g083540 45.614 114 59 3 11 123 41 152 1.46e-27 109
MS.gene07371.t1 MTR_6g055910 47.321 112 57 2 6 117 9 118 1.52e-27 108
MS.gene07371.t1 MTR_4g100720 44.248 113 61 2 7 119 9 119 1.58e-27 106
MS.gene07371.t1 MTR_2g034790 49.524 105 51 2 11 115 12 114 1.84e-27 110
MS.gene07371.t1 MTR_4g125520 32.593 270 133 11 11 255 12 257 2.54e-27 108
MS.gene07371.t1 MTR_0063s0090 38.621 145 81 3 11 155 12 148 2.72e-27 107
MS.gene07371.t1 MTR_8g017350 41.549 142 74 5 4 138 5 144 4.74e-27 111
MS.gene07371.t1 MTR_4g029540 32.917 240 144 8 11 239 10 243 5.33e-27 107
MS.gene07371.t1 MTR_2g067420 51.961 102 47 2 10 111 13 112 7.08e-27 108
MS.gene07371.t1 MTR_1g045610 47.475 99 51 1 17 115 26 123 1.68e-26 105
MS.gene07371.t1 MTR_1g062940 40.876 137 79 2 11 147 6 140 1.68e-26 104
MS.gene07371.t1 MTR_5g078140 46.087 115 59 3 11 124 12 124 1.90e-26 107
MS.gene07371.t1 MTR_3g065440 44.167 120 64 3 11 129 12 129 2.04e-26 106
MS.gene07371.t1 MTR_8g017390 45.133 113 59 3 4 115 5 115 3.00e-26 108
MS.gene07371.t1 MTR_1g086510 43.119 109 60 2 11 119 21 127 5.77e-26 104
MS.gene07371.t1 MTR_4g485530 46.602 103 53 2 13 115 14 114 8.84e-26 102
MS.gene07371.t1 MTR_0197s0010 45.918 98 52 1 14 111 3 99 1.10e-25 102
MS.gene07371.t1 MTR_4g102380 44.348 115 61 3 11 124 12 124 1.27e-25 103
MS.gene07371.t1 MTR_7g109320 52.475 101 46 2 11 111 12 110 1.29e-25 105
MS.gene07371.t1 MTR_0247s0040 45.192 104 55 2 11 114 7 108 2.79e-25 100
MS.gene07371.t1 MTR_5g078910 43.925 107 58 2 9 115 5 109 3.04e-25 103
MS.gene07371.t1 MTR_5g042030 45.614 114 59 3 11 123 7 118 4.07e-25 102
MS.gene07371.t1 MTR_8g006470 45.872 109 56 3 11 118 10 116 1.17e-24 101
MS.gene07371.t1 MTR_5g079120 44.037 109 58 3 8 115 57 163 1.71e-24 101
MS.gene07371.t1 MTR_2g033170 44.954 109 58 2 11 119 24 130 2.52e-24 101
MS.gene07371.t1 MTR_5g078930 41.346 104 60 1 8 111 5 107 2.64e-24 99.0
MS.gene07371.t1 MTR_4g063100 40.984 122 67 3 5 123 1 120 3.03e-24 99.4
MS.gene07371.t1 MTR_0193s0090 42.857 105 58 2 11 115 7 109 6.12e-24 97.4
MS.gene07371.t1 MTR_5g079290 41.905 105 59 2 11 115 17 119 1.09e-23 98.2
MS.gene07371.t1 MTR_5g078950 41.121 107 62 1 8 114 3 108 1.67e-23 97.8
MS.gene07371.t1 MTR_5g078860 44.762 105 56 2 11 115 7 109 3.71e-23 97.8
MS.gene07371.t1 MTR_5g079220 41.121 107 61 2 9 115 19 123 1.29e-22 95.5
MS.gene07371.t1 MTR_8g060940 42.574 101 56 2 11 111 7 105 1.74e-22 94.7
MS.gene07371.t1 MTR_2g096380 41.818 110 62 2 6 115 1 108 4.26e-22 93.2
MS.gene07371.t1 MTR_5g078800 42.857 105 58 2 11 115 7 109 9.62e-22 92.8
MS.gene07371.t1 MTR_7g017260 41.748 103 56 3 11 111 25 125 2.89e-21 92.0
MS.gene07371.t1 MTR_5g016510 47.000 100 50 3 17 115 8 105 3.11e-21 92.4
MS.gene07371.t1 MTR_3g101290 41.509 106 60 2 17 122 40 143 3.47e-21 90.5
MS.gene07371.t1 MTR_4g105660 29.046 241 145 7 17 235 183 419 3.98e-21 93.6
MS.gene07371.t1 MTR_4g123040 43.810 105 57 2 11 115 24 126 4.01e-21 92.0
MS.gene07371.t1 MTR_0001s0360 39.252 107 63 2 9 115 5 109 4.06e-21 90.9
MS.gene07371.t1 MTR_6g015455 46.809 94 48 2 17 110 8 99 2.41e-20 92.4
MS.gene07371.t1 MTR_7g111290 55.224 67 29 1 44 110 2 67 2.44e-20 90.5
MS.gene07371.t1 MTR_3g045430 37.398 123 74 3 2 123 4 124 2.50e-20 89.7
MS.gene07371.t1 MTR_7g035350 45.455 99 52 2 16 114 227 323 3.32e-20 91.3
MS.gene07371.t1 MTR_5g007300 51.316 76 36 1 11 86 64 138 1.05e-19 84.3
MS.gene07371.t1 MTR_3g077650 40.541 111 62 3 17 125 184 292 1.06e-19 89.7
MS.gene07371.t1 MTR_3g463400 40.541 111 63 3 6 116 126 233 1.83e-19 89.0
MS.gene07371.t1 MTR_5g070020 41.284 109 61 3 7 115 116 221 1.87e-19 88.2
MS.gene07371.t1 MTR_4g019370 40.952 105 60 2 17 121 41 143 2.33e-19 87.8
MS.gene07371.t1 MTR_6g055910 50.685 73 35 1 45 117 18 89 4.37e-19 85.5
MS.gene07371.t1 MTR_5g049190 38.211 123 72 3 17 139 22 140 7.91e-19 84.3
MS.gene07371.t1 MTR_6g027340 38.679 106 63 2 17 122 19 122 1.13e-18 83.2
MS.gene07371.t1 MTR_4g063100 50.000 72 35 1 44 115 10 80 4.77e-18 82.0
MS.gene07371.t1 MTR_4g094982 44.000 100 53 3 17 115 8 105 7.94e-18 82.4
MS.gene07371.t1 MTR_6g074860 40.196 102 56 3 17 115 7 106 8.36e-18 81.6
MS.gene07371.t1 MTR_6g027360 36.752 117 71 3 8 124 73 186 1.63e-17 82.0
MS.gene07371.t1 MTR_7g451170 40.000 100 58 2 17 116 194 291 1.84e-17 82.8
MS.gene07371.t1 MTR_2g096380 48.611 72 36 1 44 115 19 89 3.59e-17 79.3
MS.gene07371.t1 MTR_4g088015 41.000 100 57 2 17 116 224 321 4.88e-17 81.6
MS.gene07371.t1 MTR_5g082910 42.105 95 53 2 17 111 22 114 1.32e-16 79.0
MS.gene07371.t1 MTR_1g057980 40.385 104 59 3 11 114 78 178 1.37e-16 79.3
MS.gene07371.t1 MTR_5g010650 41.905 105 58 3 6 110 103 204 1.80e-16 80.1
MS.gene07371.t1 MTR_7g061550 38.182 110 65 2 11 118 4 112 1.95e-16 79.3
MS.gene07371.t1 MTR_7g037260 37.624 101 61 2 17 117 148 246 3.53e-16 78.6
MS.gene07371.t1 MTR_7g061330 34.194 155 92 5 6 153 70 221 4.25e-16 79.3
MS.gene07371.t1 MTR_7g061330 35.238 105 59 3 9 110 22 120 9.73e-13 68.9
MS.gene07371.t1 MTR_7g061330 34.194 155 92 5 6 153 106 257 4.66e-16 79.3
MS.gene07371.t1 MTR_7g061330 35.238 105 59 3 9 110 58 156 1.06e-12 68.9
MS.gene07371.t1 MTR_7g461410 34.194 155 92 5 6 153 106 257 4.66e-16 79.3
MS.gene07371.t1 MTR_7g461410 35.238 105 59 3 9 110 58 156 1.06e-12 68.9
MS.gene07371.t1 MTR_1g026870 37.273 110 66 3 6 115 78 184 2.33e-15 77.4
MS.gene07371.t1 MTR_1g026870 36.449 107 56 3 9 110 29 128 4.83e-14 73.6
MS.gene07371.t1 MTR_4g082040 38.462 104 59 3 17 117 108 209 2.68e-15 76.6
MS.gene07371.t1 MTR_3g110028 37.273 110 66 3 6 115 78 184 2.86e-15 77.0
MS.gene07371.t1 MTR_3g110028 37.383 107 55 3 9 110 29 128 1.92e-14 74.7
MS.gene07371.t1 MTR_0023s0210 45.070 71 38 1 11 81 7 76 4.91e-15 69.7
MS.gene07371.t1 MTR_3g089045 39.423 104 58 3 17 117 19 120 6.24e-15 74.3
MS.gene07371.t1 MTR_5g041570 37.500 104 60 3 17 117 137 238 9.79e-15 74.7
MS.gene07371.t1 MTR_7g450950 36.735 98 60 2 17 114 160 255 1.35e-14 73.9
MS.gene07371.t1 MTR_6g027370 35.897 117 73 2 8 124 93 207 2.30e-14 73.2
MS.gene07371.t1 MTR_7g037130 37.755 98 59 2 17 114 148 243 3.40e-14 72.8
MS.gene07371.t1 MTR_5g038910 33.577 137 84 3 7 143 19 148 4.21e-14 72.8
MS.gene07371.t1 MTR_5g038910 33.577 137 84 3 7 143 19 148 4.97e-14 72.8
MS.gene07371.t1 MTR_6g013135 30.556 216 92 10 81 292 138 299 1.43e-13 71.2
MS.gene07371.t1 MTR_7g086960 36.111 108 67 2 17 124 92 197 3.48e-13 69.7
MS.gene07371.t1 MTR_8g468380 31.304 115 77 2 7 121 15 127 5.18e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07371.t1 AT2G26960 46.541 159 74 4 9 158 18 174 5.37e-40 145
MS.gene07371.t1 AT5G55020 53.782 119 53 2 11 129 26 142 2.70e-38 142
MS.gene07371.t1 AT2G32460 44.099 161 78 3 6 166 1 149 3.01e-38 142
MS.gene07371.t1 AT2G32460 43.030 165 82 3 2 166 9 161 4.05e-38 141
MS.gene07371.t1 AT3G11440 55.085 118 51 2 11 128 41 156 1.71e-37 139
MS.gene07371.t1 AT3G11440 55.085 118 51 2 11 128 41 156 4.41e-37 139
MS.gene07371.t1 AT3G11440 55.085 118 51 2 11 128 41 156 4.41e-37 139
MS.gene07371.t1 AT3G11440 55.085 118 51 2 11 128 41 156 4.41e-37 139
MS.gene07371.t1 AT5G06100 55.652 115 49 2 11 125 32 144 5.10e-37 138
MS.gene07371.t1 AT5G06100 55.652 115 49 2 11 125 32 144 1.12e-36 138
MS.gene07371.t1 AT5G06100 55.652 115 49 2 11 125 32 144 1.12e-36 138
MS.gene07371.t1 AT5G06100 55.652 115 49 2 11 125 32 144 1.12e-36 138
MS.gene07371.t1 AT5G06100 55.652 115 49 2 11 125 32 144 1.12e-36 138
MS.gene07371.t1 AT4G26930 53.043 115 52 2 11 125 19 131 1.40e-36 135
MS.gene07371.t1 AT4G21440 36.596 235 140 7 11 243 12 239 1.41e-36 134
MS.gene07371.t1 AT2G26950 46.043 139 74 1 5 143 9 146 1.49e-35 132
MS.gene07371.t1 AT5G54230 42.012 169 91 4 11 174 12 178 4.68e-35 130
MS.gene07371.t1 AT5G26660 51.240 121 56 3 4 123 5 123 2.02e-34 129
MS.gene07371.t1 AT4G01680 43.151 146 80 3 4 148 5 148 6.01e-34 125
MS.gene07371.t1 AT4G28110 53.509 114 50 3 11 123 12 123 1.61e-33 125
MS.gene07371.t1 AT4G05100 53.509 114 50 3 11 123 13 124 2.59e-33 125
MS.gene07371.t1 AT4G01680 43.151 146 80 3 4 148 5 148 3.96e-33 125
MS.gene07371.t1 AT1G57560 50.000 122 58 3 4 124 5 124 6.72e-33 123
MS.gene07371.t1 AT1G57560 50.000 122 58 3 4 124 5 124 1.22e-32 123
MS.gene07371.t1 AT5G16770 52.381 105 48 2 11 115 12 114 3.46e-32 122
MS.gene07371.t1 AT5G16770 52.381 105 48 2 11 115 12 114 3.46e-32 122
MS.gene07371.t1 AT5G16770 52.381 105 48 2 11 115 12 114 6.32e-32 122
MS.gene07371.t1 AT5G16770 52.381 105 48 2 11 115 12 114 6.32e-32 122
MS.gene07371.t1 AT1G09540 49.587 121 58 3 4 123 5 123 9.53e-32 122
MS.gene07371.t1 AT5G10280 51.304 115 53 3 11 124 12 124 1.02e-31 121
MS.gene07371.t1 AT3G08500 51.887 106 49 2 10 115 29 132 1.08e-31 121
MS.gene07371.t1 AT5G12870 51.852 108 50 2 9 116 16 121 1.12e-31 120
MS.gene07371.t1 AT3G61250 48.246 114 56 3 11 123 12 123 1.27e-31 120
MS.gene07371.t1 AT3G02940 52.381 105 48 2 11 115 12 114 2.64e-31 119
MS.gene07371.t1 AT3G02940 52.381 105 48 2 11 115 12 114 5.22e-31 119
MS.gene07371.t1 AT3G02940 52.381 105 48 2 11 115 12 114 5.22e-31 119
MS.gene07371.t1 AT3G12720 47.107 121 61 3 10 129 21 139 5.35e-31 119
MS.gene07371.t1 AT3G13890 48.214 112 56 2 4 115 5 114 6.21e-31 119
MS.gene07371.t1 AT1G22640 49.123 114 55 3 11 123 12 123 1.25e-30 116
MS.gene07371.t1 AT5G65230 51.304 115 53 3 11 124 12 124 1.26e-30 118
MS.gene07371.t1 AT4G37780 51.887 106 48 3 11 115 12 115 1.28e-30 117
MS.gene07371.t1 AT4G09460 49.074 108 53 2 17 123 17 123 1.64e-30 115
MS.gene07371.t1 AT4G38620 50.926 108 51 2 17 123 17 123 1.88e-30 117
MS.gene07371.t1 AT1G34670 50.435 115 54 3 11 124 12 124 2.17e-30 118
MS.gene07371.t1 AT5G56110 47.826 115 57 3 11 124 12 124 2.64e-30 117
MS.gene07371.t1 AT4G17785 50.926 108 51 2 8 115 10 115 3.62e-30 117
MS.gene07371.t1 AT1G35515 50.000 108 52 2 17 123 17 123 3.66e-30 114
MS.gene07371.t1 AT1G74080 38.043 184 85 7 11 170 12 190 3.83e-30 117
MS.gene07371.t1 AT4G17785 50.926 108 51 2 8 115 10 115 3.93e-30 117
MS.gene07371.t1 AT1G63910 47.826 115 58 2 4 118 5 117 5.54e-30 117
MS.gene07371.t1 AT5G14750 50.000 104 50 2 8 111 13 114 5.75e-30 113
MS.gene07371.t1 AT2G16720 40.909 154 79 4 17 168 17 160 6.02e-30 115
MS.gene07371.t1 AT3G28470 53.465 101 45 2 11 111 12 110 6.11e-30 116
MS.gene07371.t1 AT4G34990 49.074 108 53 2 17 123 17 123 6.50e-30 115
MS.gene07371.t1 AT5G15310 48.571 105 52 2 11 115 12 114 7.35e-30 114
MS.gene07371.t1 AT2G31180 32.937 252 126 9 11 246 12 236 8.21e-30 114
MS.gene07371.t1 AT4G01680 39.873 158 80 4 4 148 5 160 8.40e-30 116
MS.gene07371.t1 AT3G01140 46.087 115 59 3 11 124 12 124 1.27e-29 116
MS.gene07371.t1 AT3G01140 46.087 115 59 3 11 124 55 167 1.27e-29 117
MS.gene07371.t1 AT3G13540 44.715 123 65 3 2 123 14 134 2.19e-29 113
MS.gene07371.t1 AT5G15310 46.087 115 59 3 11 124 12 124 2.72e-29 114
MS.gene07371.t1 AT3G01530 44.444 117 60 2 4 116 13 128 2.75e-29 111
MS.gene07371.t1 AT5G15310 46.087 115 59 3 11 124 12 124 3.08e-29 114
MS.gene07371.t1 AT3G49690 52.830 106 47 3 11 115 12 115 3.38e-29 114
MS.gene07371.t1 AT3G27810 49.057 106 52 2 11 116 20 123 3.61e-29 112
MS.gene07371.t1 AT3G27920 49.074 108 53 2 8 115 11 116 3.68e-29 112
MS.gene07371.t1 AT1G74650 48.571 105 52 2 11 115 12 114 3.69e-29 114
MS.gene07371.t1 AT1G18570 46.491 114 58 3 11 123 13 124 3.72e-29 115
MS.gene07371.t1 AT5G60890 33.824 204 120 7 11 201 12 213 4.14e-29 113
MS.gene07371.t1 AT5G40350 48.113 106 53 2 11 116 17 120 4.41e-29 111
MS.gene07371.t1 AT5G23000 50.467 107 50 3 10 115 11 115 5.19e-29 114
MS.gene07371.t1 AT5G62470 44.203 138 69 4 11 147 12 142 5.94e-29 114
MS.gene07371.t1 AT1G18710 44.348 115 61 3 11 124 12 124 6.46e-29 112
MS.gene07371.t1 AT3G23250 47.619 105 53 2 11 115 12 114 6.83e-29 112
MS.gene07371.t1 AT1G08810 49.524 105 51 2 11 115 12 114 7.20e-29 112
MS.gene07371.t1 AT1G16490 50.000 106 51 2 10 115 13 116 7.82e-29 112
MS.gene07371.t1 AT5G57620 50.943 106 49 3 11 115 12 115 1.09e-28 113
MS.gene07371.t1 AT1G06180 48.624 109 54 2 11 119 12 118 1.29e-28 111
MS.gene07371.t1 AT5G52600 48.515 101 50 2 11 111 12 110 1.35e-28 109
MS.gene07371.t1 AT1G56160 50.000 106 51 2 10 115 13 116 1.35e-28 112
MS.gene07371.t1 AT5G40330 49.038 104 51 2 12 115 13 114 1.36e-28 110
MS.gene07371.t1 AT5G07690 48.571 105 52 2 11 115 12 114 1.55e-28 112
MS.gene07371.t1 AT1G79180 46.610 118 59 3 10 125 13 128 2.09e-28 111
MS.gene07371.t1 AT2G36890 43.089 123 67 3 11 132 12 132 2.83e-28 111
MS.gene07371.t1 AT3G47600 47.619 105 53 2 11 115 12 114 2.95e-28 112
MS.gene07371.t1 AT2G36890 43.089 123 67 3 11 132 53 173 4.17e-28 112
MS.gene07371.t1 AT1G48000 47.059 102 53 1 17 118 37 137 4.18e-28 109
MS.gene07371.t1 AT5G07700 47.619 105 53 2 11 115 12 114 4.31e-28 111
MS.gene07371.t1 AT5G07700 47.619 105 53 2 11 115 12 114 4.31e-28 111
MS.gene07371.t1 AT3G13890 44.628 121 56 3 4 115 5 123 4.67e-28 112
MS.gene07371.t1 AT5G61420 45.614 114 59 3 11 123 12 123 4.74e-28 112
MS.gene07371.t1 AT5G65790 51.887 106 48 3 11 115 12 115 4.91e-28 112
MS.gene07371.t1 AT1G74430 44.348 115 61 3 11 124 12 124 4.92e-28 110
MS.gene07371.t1 AT3G12820 49.057 106 52 2 10 115 13 116 6.22e-28 108
MS.gene07371.t1 AT3G28910 48.571 105 52 2 11 115 12 114 7.18e-28 110
MS.gene07371.t1 AT2G47190 45.872 109 57 2 11 119 20 126 1.09e-27 109
MS.gene07371.t1 AT2G47460 49.505 101 49 2 11 111 12 110 1.77e-27 110
MS.gene07371.t1 AT5G62470 44.203 138 68 5 11 147 12 141 1.80e-27 110
MS.gene07371.t1 AT3G62610 44.628 121 64 3 11 130 12 130 3.16e-27 109
MS.gene07371.t1 AT1G66230 41.912 136 76 3 11 145 12 145 3.23e-27 108
MS.gene07371.t1 AT5G62320 46.281 121 55 4 11 123 13 131 3.77e-27 107
MS.gene07371.t1 AT5G14340 47.368 114 57 3 11 123 24 135 4.51e-27 107
MS.gene07371.t1 AT1G25340 45.631 103 55 1 17 119 23 124 5.07e-27 107
MS.gene07371.t1 AT5G35550 43.860 114 62 2 2 115 5 116 6.96e-27 106
MS.gene07371.t1 AT1G68320 43.750 112 61 2 8 119 16 125 7.47e-27 107
MS.gene07371.t1 AT5G49330 49.505 101 49 2 11 111 12 110 7.53e-27 108
MS.gene07371.t1 AT5G16600 40.602 133 76 3 11 142 12 142 2.58e-26 106
MS.gene07371.t1 AT4G13480 49.495 99 49 1 17 115 11 108 2.80e-26 105
MS.gene07371.t1 AT3G30210 47.059 102 53 1 17 118 32 132 4.02e-26 105
MS.gene07371.t1 AT3G60460 45.872 109 56 3 11 118 11 117 6.30e-26 105
MS.gene07371.t1 AT3G24310 47.475 99 51 1 17 115 23 120 1.04e-25 103
MS.gene07371.t1 AT3G48920 44.545 110 60 1 6 115 12 120 3.26e-25 102
MS.gene07371.t1 AT4G22680 45.217 115 60 3 11 124 12 124 5.59e-25 102
MS.gene07371.t1 AT5G52260 34.884 215 125 3 1 201 1 214 3.69e-24 99.8
MS.gene07371.t1 AT3G06490 46.789 109 56 2 11 119 19 125 6.48e-24 100
MS.gene07371.t1 AT1G66380 42.857 112 61 3 7 117 4 113 8.92e-24 95.1
MS.gene07371.t1 AT1G66370 42.727 110 60 3 9 117 6 113 8.95e-24 98.2
MS.gene07371.t1 AT4G12350 45.714 105 55 2 11 115 12 114 1.06e-23 99.0
MS.gene07371.t1 AT1G25340 43.689 103 52 2 17 119 23 119 2.21e-23 97.8
MS.gene07371.t1 AT5G26660 50.000 86 41 2 39 123 8 92 2.30e-23 98.6
MS.gene07371.t1 AT1G25340 43.689 103 52 2 17 119 23 119 2.71e-23 98.2
MS.gene07371.t1 AT4G25560 45.794 107 56 2 9 115 8 112 3.82e-23 97.4
MS.gene07371.t1 AT3G53200 45.794 107 56 2 11 117 9 113 4.83e-23 95.9
MS.gene07371.t1 AT1G79180 37.086 151 58 4 10 125 13 161 4.96e-23 97.8
MS.gene07371.t1 AT1G66390 41.964 112 62 3 7 117 4 113 6.22e-23 95.9
MS.gene07371.t1 AT1G56650 38.281 128 68 4 7 125 4 129 6.48e-23 95.9
MS.gene07371.t1 AT5G59780 42.593 108 61 1 17 124 13 119 6.77e-23 95.5
MS.gene07371.t1 AT3G46130 44.444 99 54 1 17 115 14 111 2.50e-22 94.4
MS.gene07371.t1 AT5G49620 44.660 103 56 1 17 119 31 132 2.68e-22 95.5
MS.gene07371.t1 AT3G50060 43.396 106 58 2 17 122 9 112 1.52e-21 93.2
MS.gene07371.t1 AT4G18770 40.876 137 72 5 9 139 208 341 3.18e-21 94.0
MS.gene07371.t1 AT5G49620 39.167 120 52 2 17 119 31 146 6.70e-21 91.7
MS.gene07371.t1 AT5G40350 51.351 74 35 1 43 116 3 75 1.73e-20 87.4
MS.gene07371.t1 AT4G37260 44.860 107 56 3 17 122 16 120 4.12e-20 89.4
MS.gene07371.t1 AT3G27810 52.778 72 33 1 45 116 4 74 4.23e-20 86.3
MS.gene07371.t1 AT5G58850 44.037 109 58 3 7 115 99 204 1.19e-19 89.4
MS.gene07371.t1 AT5G67300 47.000 100 50 3 17 115 9 106 1.41e-19 87.8
MS.gene07371.t1 AT3G27785 41.748 103 57 3 17 118 192 292 1.77e-19 89.0
MS.gene07371.t1 AT2G23290 45.000 100 52 3 17 115 16 113 3.30e-19 86.7
MS.gene07371.t1 AT5G40360 41.414 99 56 2 17 115 161 257 4.42e-19 87.0
MS.gene07371.t1 AT2G25230 38.346 133 73 5 5 130 13 143 5.00e-19 84.7
MS.gene07371.t1 AT3G53200 52.055 73 34 1 45 117 9 80 1.06e-18 83.2
MS.gene07371.t1 AT3G12820 55.224 67 29 1 49 115 3 68 3.47e-18 81.6
MS.gene07371.t1 AT5G11050 37.681 138 80 4 9 143 101 235 3.51e-18 85.1
MS.gene07371.t1 AT1G17950 39.450 109 62 3 17 123 8 114 4.30e-18 82.8
MS.gene07371.t1 AT2G39880 39.695 131 76 3 17 146 53 181 1.08e-17 83.2
MS.gene07371.t1 AT5G35550 52.113 71 33 1 45 115 50 119 1.68e-17 81.3
MS.gene07371.t1 AT3G55730 40.566 106 61 2 10 115 52 155 1.04e-16 80.5
MS.gene07371.t1 AT5G14750 43.373 83 41 2 38 115 3 84 1.21e-16 76.6
MS.gene07371.t1 AT4G33450 36.792 106 65 2 17 122 22 125 1.28e-16 78.6
MS.gene07371.t1 AT3G46130 48.611 72 36 1 44 115 9 79 1.32e-16 78.2
MS.gene07371.t1 AT3G09370 36.054 147 90 4 6 151 128 271 1.41e-16 80.5
MS.gene07371.t1 AT3G09370 37.255 102 61 2 9 110 80 178 7.13e-14 72.4
MS.gene07371.t1 AT3G09370 36.054 147 90 4 6 151 136 279 1.49e-16 80.5
MS.gene07371.t1 AT3G09370 37.255 102 61 2 9 110 88 186 9.23e-14 72.4
MS.gene07371.t1 AT3G09370 36.054 147 90 4 6 151 123 266 1.56e-16 80.5
MS.gene07371.t1 AT3G09370 37.255 102 61 2 9 110 75 173 7.41e-14 72.4
MS.gene07371.t1 AT5G59780 45.000 80 43 1 45 124 20 98 3.06e-16 76.6
MS.gene07371.t1 AT3G46130 49.296 71 35 1 45 115 20 89 3.70e-16 77.0
MS.gene07371.t1 AT5G17800 35.556 135 77 4 17 143 96 228 5.33e-16 77.8
MS.gene07371.t1 AT3G09230 37.000 100 61 2 17 116 58 155 7.05e-16 78.2
MS.gene07371.t1 AT3G47600 46.479 71 37 1 45 115 39 108 8.67e-16 77.4
MS.gene07371.t1 AT2G37630 40.000 110 63 2 11 118 1 109 9.40e-16 77.4
MS.gene07371.t1 AT1G26780 37.143 105 63 3 17 120 101 203 1.48e-15 75.9
MS.gene07371.t1 AT5G02320 38.182 110 65 3 6 115 60 166 1.65e-15 77.4
MS.gene07371.t1 AT5G02320 36.275 102 62 2 9 110 12 110 1.79e-13 71.2
MS.gene07371.t1 AT4G00540 36.691 139 77 6 6 140 96 227 1.67e-15 77.0
MS.gene07371.t1 AT1G69560 39.000 100 56 3 17 113 110 207 1.77e-15 76.3
MS.gene07371.t1 AT5G02320 38.182 110 65 3 6 115 120 226 1.85e-15 77.4
MS.gene07371.t1 AT5G02320 35.849 106 57 3 9 110 72 170 1.97e-13 71.2
MS.gene07371.t1 AT5G02320 38.182 110 65 3 6 115 120 226 1.85e-15 77.4
MS.gene07371.t1 AT5G02320 35.849 106 57 3 9 110 72 170 1.97e-13 71.2
MS.gene07371.t1 AT1G26780 37.500 104 62 3 17 119 101 202 1.88e-15 76.6
MS.gene07371.t1 AT4G00540 36.691 139 77 6 6 140 94 225 1.93e-15 77.0
MS.gene07371.t1 AT1G69560 39.000 100 56 3 17 113 126 223 1.95e-15 76.6
MS.gene07371.t1 AT1G73410 33.775 151 91 4 17 160 9 157 2.48e-15 73.9
MS.gene07371.t1 AT1G73410 33.775 151 91 4 17 160 9 157 2.97e-15 74.7
MS.gene07371.t1 AT4G32730 38.182 110 65 3 6 115 80 186 3.00e-15 77.0
MS.gene07371.t1 AT4G32730 35.514 107 57 3 9 110 31 130 2.86e-13 70.9
MS.gene07371.t1 AT4G32730 38.182 110 65 3 6 115 80 186 3.63e-15 77.0
MS.gene07371.t1 AT4G32730 35.514 107 57 3 9 110 31 130 3.35e-13 70.9
MS.gene07371.t1 AT4G32730 38.182 110 65 3 6 115 80 186 3.63e-15 77.0
MS.gene07371.t1 AT4G32730 35.514 107 57 3 9 110 31 130 3.35e-13 70.9
MS.gene07371.t1 AT4G32730 38.182 110 65 3 6 115 80 186 3.63e-15 77.0
MS.gene07371.t1 AT4G32730 35.514 107 57 3 9 110 31 130 3.35e-13 70.9
MS.gene07371.t1 AT4G32730 38.182 110 65 3 6 115 80 186 3.63e-15 77.0
MS.gene07371.t1 AT4G32730 35.514 107 57 3 9 110 31 130 3.35e-13 70.9
MS.gene07371.t1 AT1G66380 45.333 75 39 2 44 117 7 80 1.07e-14 69.7
MS.gene07371.t1 AT1G66380 44.118 68 37 1 7 74 4 70 2.22e-14 68.9
MS.gene07371.t1 AT3G29020 38.462 104 59 3 17 117 68 169 2.38e-14 71.6
MS.gene07371.t1 AT3G29020 38.462 104 59 3 17 117 70 171 4.36e-14 72.0
MS.gene07371.t1 AT5G11510 34.545 110 69 3 6 115 74 180 4.55e-14 73.6
MS.gene07371.t1 AT5G11510 35.294 102 64 2 9 110 25 124 1.17e-12 69.3
MS.gene07371.t1 AT5G11510 34.545 110 69 3 6 115 74 180 4.55e-14 73.6
MS.gene07371.t1 AT5G11510 35.294 102 64 2 9 110 25 124 1.17e-12 69.3
MS.gene07371.t1 AT5G11510 34.545 110 69 3 6 115 74 180 4.55e-14 73.6
MS.gene07371.t1 AT5G11510 35.294 102 64 2 9 110 25 124 1.17e-12 69.3
MS.gene07371.t1 AT5G11510 34.545 110 69 3 6 115 74 180 4.72e-14 73.6
MS.gene07371.t1 AT5G11510 35.294 102 64 2 9 110 25 124 1.30e-12 68.9
MS.gene07371.t1 AT5G11510 34.545 110 69 3 6 115 74 180 4.78e-14 73.6
MS.gene07371.t1 AT5G11510 35.294 102 64 2 9 110 25 124 1.23e-12 68.9
MS.gene07371.t1 AT1G14350 35.398 113 71 2 7 119 18 128 8.06e-14 72.0
MS.gene07371.t1 AT1G14350 35.398 113 71 2 7 119 18 128 8.06e-14 72.0
MS.gene07371.t1 AT2G02820 34.513 113 72 2 7 119 23 133 2.13e-13 70.9
MS.gene07371.t1 AT2G02820 34.513 113 72 2 7 119 23 133 2.29e-13 70.9
MS.gene07371.t1 AT5G40430 37.168 113 64 4 7 115 43 152 3.07e-13 68.9
MS.gene07371.t1 AT2G02820 36.893 103 63 2 17 119 33 133 4.34e-13 69.3
MS.gene07371.t1 AT1G22640 51.515 66 30 2 59 123 2 66 1.94e-12 65.9
MS.gene07371.t1 AT3G18100 39.604 101 52 4 12 109 384 478 4.91e-12 67.0
MS.gene07371.t1 AT3G18100 39.604 101 52 4 12 109 332 426 5.34e-12 67.0
MS.gene07371.t1 AT5G39700 37.864 103 62 2 9 111 51 151 5.54e-12 64.3
MS.gene07371.t1 AT3G18100 39.604 101 52 4 12 109 497 591 5.55e-12 67.0
MS.gene07371.t1 AT3G18100 39.604 101 52 4 12 109 545 639 5.81e-12 67.0

Find 65 sgRNAs with CRISPR-Local

Find 84 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTTTGAAAACTGCTTATT+TGG 0.060651 1.2:-64671316 None:intergenic
ACATAATGAATCCGGAATTT+TGG 0.151632 1.2:+64671628 MS.gene07371:CDS
TGATACCTCCTTCCAATTTC+CGG 0.211449 1.2:-64670716 None:intergenic
CATCGTTGGTTACTAATAAA+AGG 0.216843 1.2:+64670623 MS.gene07371:CDS
GGAACCCTTATACGGATATT+TGG 0.228598 1.2:+64671875 MS.gene07371:CDS
CTACTTCAACTTTGATTGAT+AGG 0.246409 1.2:+64671398 MS.gene07371:CDS
TCAAACCAAATATCCGTATA+AGG 0.249713 1.2:-64671880 None:intergenic
AAAGTTCTTGATGTCATTAT+CGG 0.301665 1.2:-64671107 None:intergenic
CCTTTGGAGAACGATGAAAA+AGG 0.312790 1.2:+64671561 MS.gene07371:CDS
ATAATGACATCAAGAACTTT+TGG 0.313765 1.2:+64671110 MS.gene07371:CDS
TTTGAGTTATGTTCTAAGTT+TGG 0.324176 1.2:+64670850 MS.gene07371:CDS
ACCAGTTCCATTATGTTGTC+AGG 0.338387 1.2:-64671178 None:intergenic
TGGTTTGAGGAACCCTTATA+CGG 0.340488 1.2:+64671867 MS.gene07371:CDS
AATTGTCATGCAAGTGTCTA+AGG 0.342730 1.2:-64671727 None:intergenic
AACGCGTCATTCCAAAATTC+CGG 0.348622 1.2:-64671639 None:intergenic
ATGTCATTATCGGTTCTTCC+AGG 0.362890 1.2:-64671097 None:intergenic
ACTTTGAAAACTGCTTATTT+GGG 0.369164 1.2:-64671315 None:intergenic
TGATTTACAAATTTAACTTC+TGG 0.390627 1.2:-64671265 None:intergenic
TTGATGAAAGTCAGGTCATT+TGG 0.399796 1.2:+64671847 MS.gene07371:CDS
ACCCTTCCCTGACAACATAA+TGG 0.401390 1.2:+64671171 MS.gene07371:CDS
CTAAGTTTGGTGAGTTCAAA+TGG 0.403243 1.2:+64670863 MS.gene07371:CDS
CAAACCAAATATCCGTATAA+GGG 0.421526 1.2:-64671879 None:intergenic
TCTTCTTCTTCTTTACTAAA+CGG 0.425038 1.2:-64670820 None:intergenic
CTGGAAGAAGGCAATTGCTT+TGG 0.426159 1.2:+64671815 MS.gene07371:CDS
AAGGCATCATTAAAATCATA+TGG 0.427844 1.2:-64671708 None:intergenic
GCCTCCACTCCCACCACCTA+TGG 0.431643 1.2:+64671761 MS.gene07371:CDS
CCCTGACAACATAATGGAAC+TGG 0.441688 1.2:+64671177 MS.gene07371:CDS
GAAGAAGGCAATTGCTTTGG+CGG 0.441719 1.2:+64671818 MS.gene07371:CDS
AAGTCAGGTCATTTGGTTTG+AGG 0.449343 1.2:+64671854 MS.gene07371:CDS
GTCTCCATAGGTGGTGGGAG+TGG 0.455161 1.2:-64671765 None:intergenic
GGAAGAAGGGAAGAAGCCTT+TGG 0.456662 1.2:+64671545 MS.gene07371:CDS
TTCATCGATTTCAGGGAAGA+AGG 0.458892 1.2:+64671531 MS.gene07371:intron
GGTTGAAGAAAGGAACATTA+TGG 0.458991 1.2:+64670644 MS.gene07371:CDS
AGATGTCAGAGATAAATAAC+TGG 0.463955 1.2:+64671796 MS.gene07371:CDS
AAATATGTTCTTCAATAATG+TGG 0.466264 1.2:+64671351 MS.gene07371:CDS
AACATAATGGAACTGGTTGA+TGG 0.486232 1.2:+64671184 MS.gene07371:CDS
TCCATTATGTTGTCAGGGAA+GGG 0.491147 1.2:-64671172 None:intergenic
TTCCATTATGTTGTCAGGGA+AGG 0.494749 1.2:-64671173 None:intergenic
ACATGACGACATAATGAATC+CGG 0.500403 1.2:+64671620 MS.gene07371:CDS
GGAAGGTGTTGATGAAAGTC+AGG 0.502885 1.2:+64671839 MS.gene07371:CDS
GAGTATTATACCATCTAAAA+CGG 0.511421 1.2:-64670774 None:intergenic
GATGGTTTGAAGAGTAGTAA+TGG 0.516640 1.2:+64671202 MS.gene07371:CDS
AAGGCAATTGCTTTGGCGGA+AGG 0.520845 1.2:+64671822 MS.gene07371:CDS
TAACATCATGACTTCATCGT+TGG 0.529999 1.2:+64670609 None:intergenic
ACTAATAAAAGGTTGAAGAA+AGG 0.530614 1.2:+64670634 MS.gene07371:CDS
AATATGTTCTTCAATAATGT+GGG 0.531232 1.2:+64671352 MS.gene07371:CDS
AGAGATAAATAACTGGAAGA+AGG 0.539212 1.2:+64671803 MS.gene07371:CDS
GCTTCAACATCATTCTCCAA+AGG 0.548870 1.2:-64671591 None:intergenic
GATTCATTATGTCGTCATGT+AGG 0.551510 1.2:-64671617 None:intergenic
TGTTGAGTCTCCATAGGTGG+TGG 0.552970 1.2:-64671771 None:intergenic
CCAGTTCCATTATGTTGTCA+GGG 0.557866 1.2:-64671177 None:intergenic
TCCATAGGTGGTGGGAGTGG+AGG 0.563890 1.2:-64671762 None:intergenic
TCATCGATTTCAGGGAAGAA+GGG 0.571612 1.2:+64671532 MS.gene07371:intron
TGAGTTCAAATGGTCTAAGA+TGG 0.574582 1.2:+64670873 MS.gene07371:CDS
ACATGGAACCGGAAATTGGA+AGG 0.586011 1.2:+64670708 MS.gene07371:CDS
GTTCAACACATTAGTCAATG+AGG 0.597425 1.2:+64671659 MS.gene07371:CDS
ATGGTCTAAGATGGCTCTCG+AGG 0.607145 1.2:+64670882 MS.gene07371:CDS
GTTGAGTCTCCATAGGTGGT+GGG 0.628088 1.2:-64671770 None:intergenic
ATCTGATGTTGAGTCTCCAT+AGG 0.660577 1.2:-64671777 None:intergenic
GAAGGAGGTATCAAAGAACA+CGG 0.666684 1.2:+64670726 MS.gene07371:CDS
AAAAGAAAACATGAAAGACA+TGG 0.669709 1.2:+64671142 MS.gene07371:CDS
TGATGTTGAGTCTCCATAGG+TGG 0.669883 1.2:-64671774 None:intergenic
TGGAACCGGAAATTGGAAGG+AGG 0.696666 1.2:+64670711 MS.gene07371:CDS
AACACGGGACTTGCACACTG+TGG 0.714946 1.2:+64670742 MS.gene07371:CDS
AAGGAGGTATCAAAGAACAC+GGG 0.739276 1.2:+64670727 MS.gene07371:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CGGAAAATTATTATTAATAT+CGG - chr1.2:64671480-64671499 None:intergenic 15.0%
!! AAATATGTTCTTCAATAATG+TGG + chr1.2:64671351-64671370 MS.gene07371:CDS 20.0%
!! AATATGTTCTTCAATAATGT+GGG + chr1.2:64671352-64671371 MS.gene07371:CDS 20.0%
!! ATTAAAATTAATGACACAAG+TGG - chr1.2:64671050-64671069 None:intergenic 20.0%
!! GATGTATATATAAAAGAGAA+TGG - chr1.2:64671446-64671465 None:intergenic 20.0%
!!! TGATTTACAAATTTAACTTC+TGG - chr1.2:64671268-64671287 None:intergenic 20.0%
! AAAAGAAAACATGAAAGACA+TGG + chr1.2:64671142-64671161 MS.gene07371:CDS 25.0%
! AAAGCATATGTTGAAAAACA+TGG + chr1.2:64670691-64670710 MS.gene07371:CDS 25.0%
! AAAGTTCTTGATGTCATTAT+CGG - chr1.2:64671110-64671129 None:intergenic 25.0%
! AACATGTGATCTAATGAATA+TGG - chr1.2:64670985-64671004 None:intergenic 25.0%
! ACTAATAAAAGGTTGAAGAA+AGG + chr1.2:64670634-64670653 MS.gene07371:CDS 25.0%
! GAGTATTATACCATCTAAAA+CGG - chr1.2:64670777-64670796 None:intergenic 25.0%
! TCTTCTTCTTCTTTACTAAA+CGG - chr1.2:64670823-64670842 None:intergenic 25.0%
!! AACTTTGAAAACTGCTTATT+TGG - chr1.2:64671319-64671338 None:intergenic 25.0%
!! AAGGCATCATTAAAATCATA+TGG - chr1.2:64671711-64671730 None:intergenic 25.0%
!! ACTTTGAAAACTGCTTATTT+GGG - chr1.2:64671318-64671337 None:intergenic 25.0%
!! ATAATGACATCAAGAACTTT+TGG + chr1.2:64671110-64671129 MS.gene07371:CDS 25.0%
!! GTAGTAATGGAAAAAGAATA+AGG + chr1.2:64671215-64671234 MS.gene07371:CDS 25.0%
!! TTTGAGTTATGTTCTAAGTT+TGG + chr1.2:64670850-64670869 MS.gene07371:CDS 25.0%
!!! AATTACTTTCATCGATTTCA+GGG + chr1.2:64671524-64671543 MS.gene07371:intron 25.0%
AGAGATAAATAACTGGAAGA+AGG + chr1.2:64671803-64671822 MS.gene07371:CDS 30.0%
AGATGTCAGAGATAAATAAC+TGG + chr1.2:64671796-64671815 MS.gene07371:CDS 30.0%
CAAACCAAATATCCGTATAA+GGG - chr1.2:64671882-64671901 None:intergenic 30.0%
CTACTTCAACTTTGATTGAT+AGG + chr1.2:64671398-64671417 MS.gene07371:CDS 30.0%
TATGTTGAAAAACATGGAAC+CGG + chr1.2:64670697-64670716 MS.gene07371:CDS 30.0%
TCAAACCAAATATCCGTATA+AGG - chr1.2:64671883-64671902 None:intergenic 30.0%
! ACATAATGAATCCGGAATTT+TGG + chr1.2:64671628-64671647 MS.gene07371:CDS 30.0%
! CATCGTTGGTTACTAATAAA+AGG + chr1.2:64670623-64670642 MS.gene07371:CDS 30.0%
!! CAATTACTTTCATCGATTTC+AGG + chr1.2:64671523-64671542 MS.gene07371:intron 30.0%
AAAAACATGGAACCGGAAAT+TGG + chr1.2:64670704-64670723 MS.gene07371:CDS 35.0%
AATTGTCATGCAAGTGTCTA+AGG - chr1.2:64671730-64671749 None:intergenic 35.0%
ACATGACGACATAATGAATC+CGG + chr1.2:64671620-64671639 MS.gene07371:CDS 35.0%
CTACGACCTGATGTAAAAAA+GGG + chr1.2:64670796-64670815 MS.gene07371:CDS 35.0%
GATGGTTTGAAGAGTAGTAA+TGG + chr1.2:64671202-64671221 MS.gene07371:CDS 35.0%
GATTCATTATGTCGTCATGT+AGG - chr1.2:64671620-64671639 None:intergenic 35.0%
GGTTGAAGAAAGGAACATTA+TGG + chr1.2:64670644-64670663 MS.gene07371:CDS 35.0%
GTTCAACACATTAGTCAATG+AGG + chr1.2:64671659-64671678 MS.gene07371:CDS 35.0%
TCTACGACCTGATGTAAAAA+AGG + chr1.2:64670795-64670814 MS.gene07371:CDS 35.0%
TGAGTTCAAATGGTCTAAGA+TGG + chr1.2:64670873-64670892 MS.gene07371:CDS 35.0%
TTGATGAAAGTCAGGTCATT+TGG + chr1.2:64671847-64671866 MS.gene07371:CDS 35.0%
! AACATAATGGAACTGGTTGA+TGG + chr1.2:64671184-64671203 MS.gene07371:CDS 35.0%
! CTAAGTTTGGTGAGTTCAAA+TGG + chr1.2:64670863-64670882 MS.gene07371:CDS 35.0%
! CTTTGGAGAACGATGAAAAA+GGG + chr1.2:64671562-64671581 MS.gene07371:CDS 35.0%
! TTCTTTTTGTTACAGATGCC+TGG + chr1.2:64671079-64671098 MS.gene07371:intron 35.0%
AACGCGTCATTCCAAAATTC+CGG - chr1.2:64671642-64671661 None:intergenic 40.0%
AATATGGCTGCAGTTGTAGA+AGG - chr1.2:64670969-64670988 None:intergenic 40.0%
ACCAGTTCCATTATGTTGTC+AGG - chr1.2:64671181-64671200 None:intergenic 40.0%
ATCTGATGTTGAGTCTCCAT+AGG - chr1.2:64671780-64671799 None:intergenic 40.0%
CCAGTTCCATTATGTTGTCA+GGG - chr1.2:64671180-64671199 None:intergenic 40.0%
GCTTCAACATCATTCTCCAA+AGG - chr1.2:64671594-64671613 None:intergenic 40.0%
GGAACCCTTATACGGATATT+TGG + chr1.2:64671875-64671894 MS.gene07371:CDS 40.0%
TCCATTATGTTGTCAGGGAA+GGG - chr1.2:64671175-64671194 None:intergenic 40.0%
TGAAAAAGGGAAGAAGCCTT+TGG + chr1.2:64671575-64671594 MS.gene07371:CDS 40.0%
TGATACCTCCTTCCAATTTC+CGG - chr1.2:64670719-64670738 None:intergenic 40.0%
TGGTTTGAGGAACCCTTATA+CGG + chr1.2:64671867-64671886 MS.gene07371:CDS 40.0%
TTCCATTATGTTGTCAGGGA+AGG - chr1.2:64671176-64671195 None:intergenic 40.0%
! CCTTTGGAGAACGATGAAAA+AGG + chr1.2:64671561-64671580 MS.gene07371:CDS 40.0%
!! AAGGAGGTATCAAAGAACAC+GGG + chr1.2:64670727-64670746 MS.gene07371:CDS 40.0%
!! AAGTCAGGTCATTTGGTTTG+AGG + chr1.2:64671854-64671873 MS.gene07371:CDS 40.0%
!! ATGTCATTATCGGTTCTTCC+AGG - chr1.2:64671100-64671119 None:intergenic 40.0%
!! CCTTTTTCATCGTTCTCCAA+AGG - chr1.2:64671564-64671583 None:intergenic 40.0%
!! GAAGGAGGTATCAAAGAACA+CGG + chr1.2:64670726-64670745 MS.gene07371:CDS 40.0%
!! TCATCGATTTCAGGGAAGAA+GGG + chr1.2:64671532-64671551 MS.gene07371:intron 40.0%
!! TTCATCGATTTCAGGGAAGA+AGG + chr1.2:64671531-64671550 MS.gene07371:intron 40.0%
!!! AACGGACCCTTTTTTACATC+AGG - chr1.2:64670805-64670824 None:intergenic 40.0%
!!! GAAGAAGTTGCCGTTTTAGA+TGG + chr1.2:64670764-64670783 MS.gene07371:CDS 40.0%
ACATGGAACCGGAAATTGGA+AGG + chr1.2:64670708-64670727 MS.gene07371:CDS 45.0%
ACCCTTCCCTGACAACATAA+TGG + chr1.2:64671171-64671190 MS.gene07371:CDS 45.0%
CTGGAAGAAGGCAATTGCTT+TGG + chr1.2:64671815-64671834 MS.gene07371:CDS 45.0%
GAAGAAGGCAATTGCTTTGG+CGG + chr1.2:64671818-64671837 MS.gene07371:CDS 45.0%
TGATGTTGAGTCTCCATAGG+TGG - chr1.2:64671777-64671796 None:intergenic 45.0%
! CCCTGACAACATAATGGAAC+TGG + chr1.2:64671177-64671196 MS.gene07371:CDS 45.0%
!! GGAAGGTGTTGATGAAAGTC+AGG + chr1.2:64671839-64671858 MS.gene07371:CDS 45.0%
!!! ATTTAACATATAAATTTTTA+CGG - chr1.2:64671500-64671519 None:intergenic 5.0%
AAGGCAATTGCTTTGGCGGA+AGG + chr1.2:64671822-64671841 MS.gene07371:CDS 50.0%
GGAAGAAGGGAAGAAGCCTT+TGG + chr1.2:64671545-64671564 MS.gene07371:CDS 50.0%
GTTGAGTCTCCATAGGTGGT+GGG - chr1.2:64671773-64671792 None:intergenic 50.0%
TGGAACCGGAAATTGGAAGG+AGG + chr1.2:64670711-64670730 MS.gene07371:CDS 50.0%
TGTTGAGTCTCCATAGGTGG+TGG - chr1.2:64671774-64671793 None:intergenic 50.0%
! ATGGTCTAAGATGGCTCTCG+AGG + chr1.2:64670882-64670901 MS.gene07371:CDS 50.0%
AACACGGGACTTGCACACTG+TGG + chr1.2:64670742-64670761 MS.gene07371:CDS 55.0%
!! GTCTCCATAGGTGGTGGGAG+TGG - chr1.2:64671768-64671787 None:intergenic 60.0%
!! TCCATAGGTGGTGGGAGTGG+AGG - chr1.2:64671765-64671784 None:intergenic 60.0%
GCCTCCACTCCCACCACCTA+TGG + chr1.2:64671761-64671780 MS.gene07371:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 64670616 64671902 64670616 ID=MS.gene07371
chr1.2 mRNA 64670616 64671902 64670616 ID=MS.gene07371.t1;Parent=MS.gene07371
chr1.2 exon 64670616 64670903 64670616 ID=MS.gene07371.t1.exon1;Parent=MS.gene07371.t1
chr1.2 CDS 64670616 64670903 64670616 ID=cds.MS.gene07371.t1;Parent=MS.gene07371.t1
chr1.2 exon 64671094 64671419 64671094 ID=MS.gene07371.t1.exon2;Parent=MS.gene07371.t1
chr1.2 CDS 64671094 64671419 64671094 ID=cds.MS.gene07371.t1;Parent=MS.gene07371.t1
chr1.2 exon 64671545 64671902 64671545 ID=MS.gene07371.t1.exon3;Parent=MS.gene07371.t1
chr1.2 CDS 64671545 64671902 64671545 ID=cds.MS.gene07371.t1;Parent=MS.gene07371.t1
Gene Sequence

>MS.gene07371

ATGACTTCATCGTTGGTTACTAATAAAAGGTTGAAGAAAGGAACATTATGGTCAGAAGAAGAAGATGAAATATTAAAAGCATATGTTGAAAAACATGGAACCGGAAATTGGAAGGAGGTATCAAAGAACACGGGACTTGCACACTGTGGAAGAAGTTGCCGTTTTAGATGGTATAATACTCTACGACCTGATGTAAAAAAGGGTCCGTTTAGTAAAGAAGAAGAAGAAAAATTCTTTGAGTTATGTTCTAAGTTTGGTGAGTTCAAATGGTCTAAGATGGCTCTCGAGGTATATTTTTGTTCATGCTTTACTTCTTTTCTTTTTTTCTTTTATTTGAAATATTTATCTGTCCTTCTACAACTGCAGCCATATTCATTAGATCACATGTTGTGCAATTTAATTAAATACTATACTATAATATAATATATTTACCACTTGTGTCATTAATTTTAATTTGTATTCATTCTTTTTGTTACAGATGCCTGGAAGAACCGATAATGACATCAAGAACTTTTGGAATGCAAGAAAAAGAAAACATGAAAGACATGGCTTGTCACCCTTCCCTGACAACATAATGGAACTGGTTGATGGTTTGAAGAGTAGTAATGGAAAAAGAATAAGGAATTCACAAGAAAACAAATTTCAGATACCAGAAGTTAAATTTGTAAATCAAATTCTGCATACAAACTTGTCTGATCTCCCAAATAAGCAGTTTTCAAAGTTGATTGATGATTCAAATATGTTCTTCAATAATGTGGGAAGTACTTCTACAAGCAATCATACTACTTCAACTTTGATTGATAGGTGAGTAGATTATGCAATGCATGCCATTCTCTTTTATATATACATCTATTTGTTACGCCGATATTAATAATAATTTTCCGTAAAAATTTATATGTTAAATTTACAATTACTTTCATCGATTTCAGGGAAGAAGGGAAGAAGCCTTTGGAGAACGATGAAAAAGGGAAGAAGCCTTTGGAGAATGATGTTGAAGCAAACCTACATGACGACATAATGAATCCGGAATTTTGGAATGACGCGTTCAACACATTAGTCAATGAGGTTTACAATGACTTGCATGACAAGCTTCCATATGATTTTAATGATGCCTTAGACACTTGCATGACAATTCAATCAGATCTGCCTCCACTCCCACCACCTATGGAGACTCAACATCAGATGTCAGAGATAAATAACTGGAAGAAGGCAATTGCTTTGGCGGAAGGTGTTGATGAAAGTCAGGTCATTTGGTTTGAGGAACCCTTATACGGATATTTGGTTTGA
Protein sequence

>MS.gene07371.t1

MTSSLVTNKRLKKGTLWSEEEDEILKAYVEKHGTGNWKEVSKNTGLAHCGRSCRFRWYNTLRPDVKKGPFSKEEEEKFFELCSKFGEFKWSKMALEMPGRTDNDIKNFWNARKRKHERHGLSPFPDNIMELVDGLKSSNGKRIRNSQENKFQIPEVKFVNQILHTNLSDLPNKQFSKLIDDSNMFFNNVGSTSTSNHTTSTLIDREEGKKPLENDEKGKKPLENDVEANLHDDIMNPEFWNDAFNTLVNEVYNDLHDKLPYDFNDALDTCMTIQSDLPPLPPPMETQHQMSEINNWKKAIALAEGVDESQVIWFEEPLYGYLV