Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073861.t1 | XP_013467105.1 | 50.9 | 489 | 108 | 11 | 1 | 363 | 384 | 866 | 1.20E-100 | 377.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073861.t1 | Q9FIY7 | 32.6 | 497 | 186 | 13 | 2 | 360 | 529 | 1014 | 3.3e-51 | 204.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073861.t1 | A0A072VHP2 | 50.9 | 489 | 108 | 11 | 1 | 363 | 384 | 866 | 8.5e-101 | 377.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene073861.t1 | TR | SNF2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073861.t1 | MTR_1g044120 | 57.817 | 339 | 68 | 10 | 1 | 271 | 384 | 715 | 1.41e-101 | 328 |
| MS.gene073861.t1 | MTR_1g044120 | 75.676 | 74 | 4 | 2 | 303 | 363 | 794 | 866 | 7.70e-23 | 102 |
| MS.gene073861.t1 | MTR_2g084630 | 28.977 | 352 | 168 | 8 | 1 | 270 | 252 | 603 | 4.46e-34 | 136 |
| MS.gene073861.t1 | MTR_2g084630 | 28.492 | 358 | 168 | 8 | 1 | 270 | 252 | 609 | 2.47e-33 | 134 |
| MS.gene073861.t1 | MTR_7g089190 | 38.462 | 91 | 49 | 3 | 168 | 256 | 296 | 381 | 2.25e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073861.t1 | AT5G43530 | 33.266 | 496 | 184 | 17 | 2 | 360 | 529 | 1014 | 5.63e-61 | 216 |
| MS.gene073861.t1 | AT5G22750 | 31.768 | 362 | 149 | 10 | 1 | 270 | 261 | 616 | 7.41e-40 | 153 |
| MS.gene073861.t1 | AT5G05130 | 32.667 | 150 | 78 | 6 | 169 | 316 | 360 | 488 | 3.44e-13 | 72.4 |
| MS.gene073861.t1 | AT1G11100 | 40.566 | 106 | 50 | 4 | 167 | 263 | 490 | 591 | 3.75e-13 | 72.4 |
| MS.gene073861.t1 | AT1G11100 | 40.541 | 111 | 43 | 5 | 167 | 263 | 633 | 734 | 4.13e-13 | 72.4 |
| MS.gene073861.t1 | AT3G16600 | 23.860 | 285 | 125 | 8 | 167 | 369 | 115 | 389 | 3.18e-12 | 69.3 |
Find 102 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATCCATATTTGTTCATTA+TGG | 0.248590 | 1.4:+28168486 | MS.gene073861:CDS |
| AGACTACACATCAGTGTCTT+TGG | 0.248953 | 1.4:-28167528 | None:intergenic |
| AGGATATCATCTTCTGTTCT+TGG | 0.250282 | 1.4:-28171478 | None:intergenic |
| GACTACACATCAGTGTCTTT+GGG | 0.280932 | 1.4:-28167527 | None:intergenic |
| CCCACCATAATGAACAAATA+TGG | 0.317995 | 1.4:-28168490 | None:intergenic |
| GTGCAACATACTGCTCAAAT+TGG | 0.336046 | 1.4:-28169750 | None:intergenic |
| TAACAACAAATCAGGATTAC+TGG | 0.336562 | 1.4:-28168520 | None:intergenic |
| ACCCCTTCGTCTAATTTAGA+AGG | 0.350574 | 1.4:+28168277 | MS.gene073861:CDS |
| TCCTCAGTTGTTGCTGGAAG+TGG | 0.360185 | 1.4:-28167340 | None:intergenic |
| TGTTCATCCTCAGTTGTTGC+TGG | 0.371403 | 1.4:-28167346 | None:intergenic |
| GAATCTGAACGGGACTTCTA+TGG | 0.372144 | 1.4:+28169545 | MS.gene073861:CDS |
| TTTCGAGCCTTCATTTCCTC+AGG | 0.376431 | 1.4:-28167072 | None:intergenic |
| AGATTCATTACCTTCCTATA+TGG | 0.380304 | 1.4:-28166962 | None:intergenic |
| TGTTGTCTTGGACATACTTA+TGG | 0.386028 | 1.4:+28168551 | MS.gene073861:CDS |
| CACTTTAATTGTTTGTCCTA+TGG | 0.391139 | 1.4:+28168303 | MS.gene073861:CDS |
| CTCTTTGATCACCTGCTCAT+AGG | 0.393259 | 1.4:-28169295 | None:intergenic |
| ATATACGTCAACATATTTAC+TGG | 0.411869 | 1.4:+28167767 | MS.gene073861:CDS |
| TGTTTGTCCTATGGCGTTGT+TGG | 0.411928 | 1.4:+28168312 | MS.gene073861:CDS |
| AACCTCATTGCATATATTGT+AGG | 0.412719 | 1.4:-28167649 | None:intergenic |
| TCTGCTCAAGTCTGCATACT+TGG | 0.418328 | 1.4:-28169957 | None:intergenic |
| ATATGAGGATTCATCGTATT+GGG | 0.419818 | 1.4:+28170885 | MS.gene073861:CDS |
| TCATACTCTAACAACAAATC+AGG | 0.442295 | 1.4:-28168528 | None:intergenic |
| ACCAGAGTCAAGCTCTGTAT+TGG | 0.444501 | 1.4:+28167559 | MS.gene073861:CDS |
| AGAGAAATCTACATCCTTGC+TGG | 0.445334 | 1.4:+28167622 | MS.gene073861:CDS |
| TCTTTGATCACCTGCTCATA+GGG | 0.449247 | 1.4:-28169294 | None:intergenic |
| TGAGGATGAACAAGCACTTT+CGG | 0.449645 | 1.4:+28167357 | MS.gene073861:CDS |
| TCCATATTTGTTCATTATGG+TGG | 0.450185 | 1.4:+28168489 | MS.gene073861:CDS |
| TCCTGTCAATAGCGAAGAAA+AGG | 0.450426 | 1.4:+28167307 | MS.gene073861:CDS |
| TCTGTATAGGTGGACTAAGT+TGG | 0.452785 | 1.4:+28169263 | MS.gene073861:intron |
| CTTGCCATCTGTGTTGCTTG+TGG | 0.453973 | 1.4:-28167809 | None:intergenic |
| TCTTCTTGCGTGTGCAACCT+TGG | 0.454109 | 1.4:+28169121 | MS.gene073861:CDS |
| CCATATTTGTTCATTATGGT+GGG | 0.461498 | 1.4:+28168490 | MS.gene073861:CDS |
| AATATGAGGATTCATCGTAT+TGG | 0.463561 | 1.4:+28170884 | MS.gene073861:CDS |
| TTCGAGCCTTCATTTCCTCA+GGG | 0.472305 | 1.4:-28167071 | None:intergenic |
| GTGTGCAACCTTGGTGCAGC+TGG | 0.480527 | 1.4:+28169130 | MS.gene073861:CDS |
| AACCTTGGTGCAGCTGGCAG+TGG | 0.481522 | 1.4:+28169136 | MS.gene073861:CDS |
| TGCTAGAGATTGAGCCATAT+AGG | 0.482526 | 1.4:+28166948 | MS.gene073861:CDS |
| GTTTGTCCTATGGCGTTGTT+GGG | 0.485034 | 1.4:+28168313 | MS.gene073861:CDS |
| GCTTTCTATCCAGAATAGCT+TGG | 0.498566 | 1.4:+28169078 | MS.gene073861:intron |
| CTAGCACCACTCTGTACCAT+TGG | 0.502831 | 1.4:-28168716 | None:intergenic |
| TACCATTAGGAAAACATTTG+AGG | 0.504959 | 1.4:-28170744 | None:intergenic |
| CATATTTGTTCATTATGGTG+GGG | 0.508018 | 1.4:+28168491 | MS.gene073861:CDS |
| TCAAGGATATTTGCACATAG+TGG | 0.509667 | 1.4:-28169789 | None:intergenic |
| ATCGTATTGGGCAAAAGCGA+AGG | 0.513110 | 1.4:+28170897 | MS.gene073861:CDS |
| GACAACTTACTTTAGCTCTC+AGG | 0.521549 | 1.4:-28169578 | None:intergenic |
| TGAACAGTCAGAATCTGAAC+GGG | 0.524328 | 1.4:+28169535 | MS.gene073861:intron |
| GAGAGAATAGCATCTACCAC+AGG | 0.525859 | 1.4:+28168690 | MS.gene073861:CDS |
| TATAAAATCCCATAAAAGCC+AGG | 0.528721 | 1.4:+28168752 | MS.gene073861:CDS |
| TTTCACCCCTGAGGAAATGA+AGG | 0.530628 | 1.4:+28167065 | MS.gene073861:CDS |
| GTTAGAGTATGATGTTGTCT+TGG | 0.534807 | 1.4:+28168539 | MS.gene073861:CDS |
| GTTGCGGAGCAAGCAATATG+AGG | 0.538175 | 1.4:+28170870 | MS.gene073861:CDS |
| AACAGGGAACAGTGGAAGAT+CGG | 0.539243 | 1.4:+28171439 | MS.gene073861:intron |
| ATCAAACTACATGCGTGGGC+CGG | 0.544076 | 1.4:+28171145 | MS.gene073861:CDS |
| TAGCACCACTCTGTACCATT+GGG | 0.544200 | 1.4:-28168715 | None:intergenic |
| ATATTTGTTCATTATGGTGG+GGG | 0.549272 | 1.4:+28168492 | MS.gene073861:CDS |
| GCAGTATGTTGCACAAGGAA+AGG | 0.550817 | 1.4:+28169759 | MS.gene073861:CDS |
| GGAAATGAAGGCTCGAAAGC+GGG | 0.551477 | 1.4:+28167077 | MS.gene073861:CDS |
| TCCAATACAGAGCTTGACTC+TGG | 0.552781 | 1.4:-28167560 | None:intergenic |
| CACCTTCTAAATTAGACGAA+GGG | 0.555968 | 1.4:-28168279 | None:intergenic |
| TTCTTATCAAACTACATGCG+TGG | 0.558906 | 1.4:+28171140 | MS.gene073861:CDS |
| AGGAAATGAAGGCTCGAAAG+CGG | 0.559282 | 1.4:+28167076 | MS.gene073861:CDS |
| GGTTCAAAAGCCCTATGAGC+AGG | 0.561067 | 1.4:+28169284 | MS.gene073861:CDS |
| TACAGAGCTTGACTCTGGTA+AGG | 0.562707 | 1.4:-28167555 | None:intergenic |
| GCATACAATATCATAGAAGC+CGG | 0.573735 | 1.4:-28171164 | None:intergenic |
| ACTACACATCAGTGTCTTTG+GGG | 0.576822 | 1.4:-28167526 | None:intergenic |
| ACAAATATGGATATGCTGCC+TGG | 0.586898 | 1.4:-28168477 | None:intergenic |
| CATGGTGGAATCTGCAGTTG+CGG | 0.587412 | 1.4:+28170854 | MS.gene073861:CDS |
| CTTGAAACGCATTCAAAACC+AGG | 0.587458 | 1.4:+28168459 | MS.gene073861:CDS |
| CTATGGCGTTGTTGGGTCAG+TGG | 0.591785 | 1.4:+28168320 | MS.gene073861:CDS |
| TCGTATTGGGCAAAAGCGAA+GGG | 0.594361 | 1.4:+28170898 | MS.gene073861:CDS |
| TAATGAAAATGTAGGATCCA+TGG | 0.594818 | 1.4:+28170836 | MS.gene073861:intron |
| CAACTGCATTAGTAAAGTCA+AGG | 0.597947 | 1.4:-28169806 | None:intergenic |
| CATCTACCACAGGGTCCCAA+TGG | 0.598243 | 1.4:+28168700 | MS.gene073861:CDS |
| TCGAAGTCAGAAGACAGTGA+TGG | 0.598280 | 1.4:+28168207 | MS.gene073861:CDS |
| GGCGTTGTTGGGTCAGTGGA+AGG | 0.601051 | 1.4:+28168324 | MS.gene073861:CDS |
| CACTGACCCAACAACGCCAT+AGG | 0.606616 | 1.4:-28168319 | None:intergenic |
| CCTTCGTCTAATTTAGAAGG+TGG | 0.607459 | 1.4:+28168280 | MS.gene073861:CDS |
| TCTTATCAAACTACATGCGT+GGG | 0.612713 | 1.4:+28171141 | MS.gene073861:CDS |
| ACCTTCTAAATTAGACGAAG+GGG | 0.612866 | 1.4:-28168278 | None:intergenic |
| CGTCAACATATTTACTGGAG+AGG | 0.615150 | 1.4:+28167772 | MS.gene073861:CDS |
| ATTTCCACAAGCAACACAGA+TGG | 0.621081 | 1.4:+28167805 | MS.gene073861:CDS |
| AGAGATTGAGCCATATAGGA+AGG | 0.621596 | 1.4:+28166952 | MS.gene073861:CDS |
| TTGTTGATGTCACTAAAAGC+TGG | 0.623419 | 1.4:+28170696 | MS.gene073861:CDS |
| TCGAGCCTTCATTTCCTCAG+GGG | 0.629672 | 1.4:-28167070 | None:intergenic |
| CAAGCAACACAGATGGCAAG+AGG | 0.631120 | 1.4:+28167812 | MS.gene073861:CDS |
| TGTAAGAAGATTCATCGTGA+AGG | 0.631788 | 1.4:+28170925 | MS.gene073861:CDS |
| GTGAACAGTCAGAATCTGAA+CGG | 0.632197 | 1.4:+28169534 | MS.gene073861:intron |
| TCTGTACCATTGGGACCCTG+TGG | 0.644630 | 1.4:-28168706 | None:intergenic |
| TTTGAGCAGTATGTTGCACA+AGG | 0.648339 | 1.4:+28169754 | MS.gene073861:CDS |
| GCAACACAGATGGCAAGAGG+AGG | 0.648362 | 1.4:+28167815 | MS.gene073861:CDS |
| CCACCTTCTAAATTAGACGA+AGG | 0.652743 | 1.4:-28168280 | None:intergenic |
| ATGATTCAGTATGAGACTCG+AGG | 0.659377 | 1.4:-28169994 | None:intergenic |
| AGCCTACAATATATGCAATG+AGG | 0.659676 | 1.4:+28167647 | MS.gene073861:CDS |
| CGCAACTGCAGATTCCACCA+TGG | 0.664672 | 1.4:-28170853 | None:intergenic |
| TGAAAATGTAGGATCCATGG+TGG | 0.671865 | 1.4:+28170839 | MS.gene073861:intron |
| TTGATGTCACTAAAAGCTGG+TGG | 0.692474 | 1.4:+28170699 | MS.gene073861:CDS |
| TACCACTGCCAGCTGCACCA+AGG | 0.695747 | 1.4:-28169138 | None:intergenic |
| AGAGAATAGCATCTACCACA+GGG | 0.698579 | 1.4:+28168691 | MS.gene073861:CDS |
| GCCACTTCCAGCAACAACTG+AGG | 0.699488 | 1.4:+28167339 | MS.gene073861:CDS |
| ATATTGTAGGCTGACCAGCA+AGG | 0.716176 | 1.4:-28167636 | None:intergenic |
| AGGGTCCCAATGGTACAGAG+TGG | 0.735899 | 1.4:+28168710 | MS.gene073861:CDS |
| CTAGGCTGATTTCACCCCTG+AGG | 0.737779 | 1.4:+28167056 | MS.gene073861:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGCAAAACTAATTATTAT+TGG | - | chr1.4:28169916-28169935 | None:intergenic | 15.0% |
| !! | TAATATTGAACAGAAAAATT+AGG | - | chr1.4:28167257-28167276 | None:intergenic | 15.0% |
| !! | TCAATTAATATTTAAGTGAA+AGG | + | chr1.4:28168403-28168422 | MS.gene073861:intron | 15.0% |
| !! | TGACATCTTAATTATTTATT+AGG | + | chr1.4:28171042-28171061 | MS.gene073861:intron | 15.0% |
| !!! | GAACATTTTAATTTTGAAAA+GGG | + | chr1.4:28171082-28171101 | MS.gene073861:intron | 15.0% |
| !!! | TGAACATTTTAATTTTGAAA+AGG | + | chr1.4:28171081-28171100 | MS.gene073861:intron | 15.0% |
| !!! | TTATTTCTATAATGATATCA+AGG | - | chr1.4:28167719-28167738 | None:intergenic | 15.0% |
| !! | AAAGCTACAAACTATTAAAA+AGG | - | chr1.4:28167140-28167159 | None:intergenic | 20.0% |
| !! | AAATTAAAATGTTCAATCCA+AGG | - | chr1.4:28171076-28171095 | None:intergenic | 20.0% |
| !! | AAGATATGAAAGACATAAAA+AGG | - | chr1.4:28167494-28167513 | None:intergenic | 20.0% |
| !! | AAGCTACAAACTATTAAAAA+GGG | - | chr1.4:28167139-28167158 | None:intergenic | 20.0% |
| !! | ATATCCATATTTGTTCATTA+TGG | + | chr1.4:28168486-28168505 | MS.gene073861:CDS | 20.0% |
| !! | TATGAGAAATGCATAAAATA+TGG | - | chr1.4:28171226-28171245 | None:intergenic | 20.0% |
| !! | TTATTATTGGTAGAAGAATT+AGG | - | chr1.4:28169903-28169922 | None:intergenic | 20.0% |
| !! | TTCATTAATCAACCAAAATA+GGG | - | chr1.4:28171401-28171420 | None:intergenic | 20.0% |
| !! | TTTCATTAATCAACCAAAAT+AGG | - | chr1.4:28171402-28171421 | None:intergenic | 20.0% |
| !!! | AAAGAAATATTTTCAGATTG+TGG | - | chr1.4:28168945-28168964 | None:intergenic | 20.0% |
| !!! | AAAGTATTGTTTTTAGTCAA+TGG | + | chr1.4:28170443-28170462 | MS.gene073861:intron | 20.0% |
| !!! | AAGAAATATTTTCAGATTGT+GGG | - | chr1.4:28168944-28168963 | None:intergenic | 20.0% |
| !!! | AGTTATTTCACTTTTGTAAT+AGG | + | chr1.4:28169633-28169652 | MS.gene073861:intron | 20.0% |
| !!! | AGTTTTTGTAATGAAAATGT+AGG | + | chr1.4:28170828-28170847 | MS.gene073861:intron | 20.0% |
| !!! | TAAGTTTGTTATTTCTAACT+AGG | + | chr1.4:28167038-28167057 | MS.gene073861:intron | 20.0% |
| !!! | TTATTCAATTCTTCATTTTG+CGG | - | chr1.4:28170046-28170065 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCGTTATAGATTC+TGG | + | chr1.4:28168120-28168139 | MS.gene073861:intron | 20.0% |
| ! | ATATACGTCAACATATTTAC+TGG | + | chr1.4:28167767-28167786 | MS.gene073861:CDS | 25.0% |
| ! | ATTGAATTGAATGTCATCAT+TGG | + | chr1.4:28167185-28167204 | MS.gene073861:intron | 25.0% |
| ! | TAACGAAACAAAAGAGAAAA+GGG | + | chr1.4:28170574-28170593 | MS.gene073861:intron | 25.0% |
| ! | TACATGTATTCAAAATCTTC+AGG | + | chr1.4:28168431-28168450 | MS.gene073861:intron | 25.0% |
| ! | TCAATCAATTGAATATCAGT+TGG | - | chr1.4:28169512-28169531 | None:intergenic | 25.0% |
| ! | TCATTAATCAACCAAAATAG+GGG | - | chr1.4:28171400-28171419 | None:intergenic | 25.0% |
| ! | TCTAAAAAATTTAGCTGTGT+CGG | - | chr1.4:28167960-28167979 | None:intergenic | 25.0% |
| ! | TGATATTGAGAACAATTTGA+CGG | + | chr1.4:28170354-28170373 | MS.gene073861:intron | 25.0% |
| ! | TTAACGAAACAAAAGAGAAA+AGG | + | chr1.4:28170573-28170592 | MS.gene073861:intron | 25.0% |
| !! | CCTAGCAATTTTATAATAGT+GGG | - | chr1.4:28168903-28168922 | None:intergenic | 25.0% |
| !! | CTAGCAATTTTATAATAGTG+GGG | - | chr1.4:28168902-28168921 | None:intergenic | 25.0% |
| !! | TAGCAATTTTATAATAGTGG+GGG | - | chr1.4:28168901-28168920 | None:intergenic | 25.0% |
| !! | TCCTAGCAATTTTATAATAG+TGG | - | chr1.4:28168904-28168923 | None:intergenic | 25.0% |
| !!! | AACTTTCCATACTTTTTAAC+AGG | + | chr1.4:28167738-28167757 | MS.gene073861:intron | 25.0% |
| !!! | ACAATATTTTTTCAGCTAAG+AGG | + | chr1.4:28168244-28168263 | MS.gene073861:CDS | 25.0% |
| !!! | TTTTTAAGTTGCTTCTGTAT+AGG | + | chr1.4:28169250-28169269 | MS.gene073861:intron | 25.0% |
| AAACAAAGGATAAAGAAGGA+AGG | + | chr1.4:28169371-28169390 | MS.gene073861:intron | 30.0% | |
| AAACCTAAAAAGGAACAATG+AGG | - | chr1.4:28170678-28170697 | None:intergenic | 30.0% | |
| AAACTGGTATACATACCATT+AGG | - | chr1.4:28170760-28170779 | None:intergenic | 30.0% | |
| AACCTAAAAAGGAACAATGA+GGG | - | chr1.4:28170677-28170696 | None:intergenic | 30.0% | |
| AACCTCATTGCATATATTGT+AGG | - | chr1.4:28167652-28167671 | None:intergenic | 30.0% | |
| AAGGAAACAAAGGATAAAGA+AGG | + | chr1.4:28169367-28169386 | MS.gene073861:intron | 30.0% | |
| AATATGAGGATTCATCGTAT+TGG | + | chr1.4:28170884-28170903 | MS.gene073861:CDS | 30.0% | |
| AATGAGGGAAAAAGTGAAAA+AGG | - | chr1.4:28170662-28170681 | None:intergenic | 30.0% | |
| AATGATAGTTCCAGAAAAAG+AGG | - | chr1.4:28169047-28169066 | None:intergenic | 30.0% | |
| AGATAAACAGTTATGAAGCA+CGG | - | chr1.4:28168080-28168099 | None:intergenic | 30.0% | |
| AGATTCATTACCTTCCTATA+TGG | - | chr1.4:28166965-28166984 | None:intergenic | 30.0% | |
| AGTCAACAAAACAGTATTTG+AGG | - | chr1.4:28171372-28171391 | None:intergenic | 30.0% | |
| AGTGAAGTTTCCATTACATT+GGG | + | chr1.4:28168642-28168661 | MS.gene073861:intron | 30.0% | |
| ATATGAGGATTCATCGTATT+GGG | + | chr1.4:28170885-28170904 | MS.gene073861:CDS | 30.0% | |
| ATATTTGTTCATTATGGTGG+GGG | + | chr1.4:28168492-28168511 | MS.gene073861:CDS | 30.0% | |
| ATCAATTGAATATCAGTTGG+TGG | - | chr1.4:28169509-28169528 | None:intergenic | 30.0% | |
| ATTAATCAACCAAAATAGGG+GGG | - | chr1.4:28171398-28171417 | None:intergenic | 30.0% | |
| ATTGGTAGAAGAATTAGGAA+TGG | - | chr1.4:28169898-28169917 | None:intergenic | 30.0% | |
| CACTTTAATTGTTTGTCCTA+TGG | + | chr1.4:28168303-28168322 | MS.gene073861:CDS | 30.0% | |
| CATATTTGTTCATTATGGTG+GGG | + | chr1.4:28168491-28168510 | MS.gene073861:CDS | 30.0% | |
| CATTAATCAACCAAAATAGG+GGG | - | chr1.4:28171399-28171418 | None:intergenic | 30.0% | |
| CCATATTTGTTCATTATGGT+GGG | + | chr1.4:28168490-28168509 | MS.gene073861:CDS | 30.0% | |
| CCCACTATTATAAAATTGCT+AGG | + | chr1.4:28168900-28168919 | MS.gene073861:intron | 30.0% | |
| CCTGTTTGAATTGAATGTAA+CGG | - | chr1.4:28169729-28169748 | None:intergenic | 30.0% | |
| GAACATAGTCAGAAATATTC+TGG | + | chr1.4:28170412-28170431 | MS.gene073861:intron | 30.0% | |
| GATAGGATTCTTAAGATTTG+AGG | + | chr1.4:28170509-28170528 | MS.gene073861:intron | 30.0% | |
| GTGGTCAATGTTTGAAAAAA+TGG | - | chr1.4:28171292-28171311 | None:intergenic | 30.0% | |
| GTGTTCCAATTTCAATTGTT+TGG | + | chr1.4:28167442-28167461 | MS.gene073861:intron | 30.0% | |
| TAACAACAAATCAGGATTAC+TGG | - | chr1.4:28168523-28168542 | None:intergenic | 30.0% | |
| TAAGCAATTGTGCATATTAG+AGG | + | chr1.4:28167231-28167250 | MS.gene073861:intron | 30.0% | |
| TAATGAAAATGTAGGATCCA+TGG | + | chr1.4:28170836-28170855 | MS.gene073861:intron | 30.0% | |
| TACCATTAGGAAAACATTTG+AGG | - | chr1.4:28170747-28170766 | None:intergenic | 30.0% | |
| TATAAAATCCCATAAAAGCC+AGG | + | chr1.4:28168752-28168771 | MS.gene073861:CDS | 30.0% | |
| TCATACTCTAACAACAAATC+AGG | - | chr1.4:28168531-28168550 | None:intergenic | 30.0% | |
| TCCATATTTGTTCATTATGG+TGG | + | chr1.4:28168489-28168508 | MS.gene073861:CDS | 30.0% | |
| TCTAATTGTCCTAATTAGAG+AGG | - | chr1.4:28168357-28168376 | None:intergenic | 30.0% | |
| TCTCAATATCAACCTTGAAT+GGG | - | chr1.4:28170345-28170364 | None:intergenic | 30.0% | |
| TGACATCAACAAACCTAAAA+AGG | - | chr1.4:28170688-28170707 | None:intergenic | 30.0% | |
| TTCCTGATAATTAACCTGAA+TGG | - | chr1.4:28168833-28168852 | None:intergenic | 30.0% | |
| TTCTCAATATCAACCTTGAA+TGG | - | chr1.4:28170346-28170365 | None:intergenic | 30.0% | |
| TTGGTAGAAGAATTAGGAAT+GGG | - | chr1.4:28169897-28169916 | None:intergenic | 30.0% | |
| TTTATTAGGTCAAATGTCCT+TGG | + | chr1.4:28171056-28171075 | MS.gene073861:intron | 30.0% | |
| ! | AAATATTTTCAGATTGTGGG+CGG | - | chr1.4:28168941-28168960 | None:intergenic | 30.0% |
| ! | AACACATTTTATATACCTCC+AGG | - | chr1.4:28167427-28167446 | None:intergenic | 30.0% |
| ! | AATCTCCTGTATCCTTTTAA+GGG | + | chr1.4:28171325-28171344 | MS.gene073861:intron | 30.0% |
| ! | AGAAGCTTAAATTTGCTTGA+GGG | - | chr1.4:28167695-28167714 | None:intergenic | 30.0% |
| ! | CACTTTTATAAGAAGCTGAT+AGG | - | chr1.4:28168580-28168599 | None:intergenic | 30.0% |
| ! | CAGCTTCTTATAAAAGTGTA+AGG | + | chr1.4:28168582-28168601 | MS.gene073861:intron | 30.0% |
| ! | GTCTTTCATATCTTTAGAGA+AGG | + | chr1.4:28167500-28167519 | MS.gene073861:intron | 30.0% |
| ! | TAGAAGCTTAAATTTGCTTG+AGG | - | chr1.4:28167696-28167715 | None:intergenic | 30.0% |
| ! | TTCTTTATCCTTTGTTTCCT+TGG | - | chr1.4:28169368-28169387 | None:intergenic | 30.0% |
| !! | AGCAATTTTATAATAGTGGG+GGG | - | chr1.4:28168900-28168919 | None:intergenic | 30.0% |
| !! | GATGTCTTTAGTTAGTTTGT+TGG | + | chr1.4:28171257-28171276 | MS.gene073861:intron | 30.0% |
| !! | TGTAGAGTTCTAAAAGTTGA+TGG | - | chr1.4:28167858-28167877 | None:intergenic | 30.0% |
| !! | TTTCCATACTTTTTAACAGG+AGG | + | chr1.4:28167741-28167760 | MS.gene073861:intron | 30.0% |
| !!! | ATATTTTTTCAGCTAAGAGG+AGG | + | chr1.4:28168247-28168266 | MS.gene073861:CDS | 30.0% |
| !!! | GACTTCATTTTTTGATCTGT+TGG | + | chr1.4:28170465-28170484 | MS.gene073861:intron | 30.0% |
| !!! | GTATTTGAGGACCTTTTTTT+TGG | - | chr1.4:28171359-28171378 | None:intergenic | 30.0% |
| !!! | TTAGTTTTGCAATTTTGCAG+TGG | + | chr1.4:28169923-28169942 | MS.gene073861:intron | 30.0% |
| AAAATCCCTTGACCAATTTC+AGG | - | chr1.4:28169322-28169341 | None:intergenic | 35.0% | |
| AAATCCCTTGACCAATTTCA+GGG | - | chr1.4:28169321-28169340 | None:intergenic | 35.0% | |
| AAGCAAAAGAGTTCATTGTC+TGG | + | chr1.4:28169019-28169038 | MS.gene073861:intron | 35.0% | |
| AATCAGGAAACCCAATGTAA+TGG | - | chr1.4:28168655-28168674 | None:intergenic | 35.0% | |
| ACCTTCTAAATTAGACGAAG+GGG | - | chr1.4:28168281-28168300 | None:intergenic | 35.0% | |
| AGCCTACAATATATGCAATG+AGG | + | chr1.4:28167647-28167666 | MS.gene073861:CDS | 35.0% | |
| AGGTTAGTACAAATAGTACG+TGG | + | chr1.4:28167667-28167686 | MS.gene073861:intron | 35.0% | |
| ATAGATCTTCCAAGCTATTC+TGG | - | chr1.4:28169090-28169109 | None:intergenic | 35.0% | |
| ATCAACATGTGAAGGTGAAT+AGG | - | chr1.4:28171002-28171021 | None:intergenic | 35.0% | |
| ATTGCATGAGCTATAGTTCT+AGG | - | chr1.4:28170976-28170995 | None:intergenic | 35.0% | |
| CAACTGCATTAGTAAAGTCA+AGG | - | chr1.4:28169809-28169828 | None:intergenic | 35.0% | |
| CACCTTCTAAATTAGACGAA+GGG | - | chr1.4:28168282-28168301 | None:intergenic | 35.0% | |
| CAGTGAAGTTTCCATTACAT+TGG | + | chr1.4:28168641-28168660 | MS.gene073861:intron | 35.0% | |
| CAGTGTAGTGTTAGATAAAC+TGG | - | chr1.4:28170776-28170795 | None:intergenic | 35.0% | |
| CCCACCATAATGAACAAATA+TGG | - | chr1.4:28168493-28168512 | None:intergenic | 35.0% | |
| CCGTTACATTCAATTCAAAC+AGG | + | chr1.4:28169726-28169745 | MS.gene073861:intron | 35.0% | |
| CCTAGAAACCCAGTAATTAA+GGG | - | chr1.4:28169680-28169699 | None:intergenic | 35.0% | |
| CCTTAATTACTGGGTTTCTA+GGG | + | chr1.4:28169678-28169697 | MS.gene073861:intron | 35.0% | |
| CGATCTTATTGTACTTCCAT+CGG | + | chr1.4:28170315-28170334 | MS.gene073861:intron | 35.0% | |
| CTAGAAACCCAGTAATTAAG+GGG | - | chr1.4:28169679-28169698 | None:intergenic | 35.0% | |
| CTGGAACTATCATTCTGAAT+TGG | + | chr1.4:28169053-28169072 | MS.gene073861:intron | 35.0% | |
| CTTTACTAATGCAGTTGAGA+CGG | + | chr1.4:28169812-28169831 | MS.gene073861:intron | 35.0% | |
| CTTTCCTGGTTTCAAAAATC+AGG | - | chr1.4:28168671-28168690 | None:intergenic | 35.0% | |
| GAGATTGCTTAAGAAAAACG+TGG | - | chr1.4:28171311-28171330 | None:intergenic | 35.0% | |
| GCATACAATATCATAGAAGC+CGG | - | chr1.4:28171167-28171186 | None:intergenic | 35.0% | |
| GTAGAAATGTGCTATATGCA+TGG | + | chr1.4:28170169-28170188 | MS.gene073861:intron | 35.0% | |
| GTTAGAGTATGATGTTGTCT+TGG | + | chr1.4:28168539-28168558 | MS.gene073861:CDS | 35.0% | |
| TAGAAACCCAGTAATTAAGG+GGG | - | chr1.4:28169678-28169697 | None:intergenic | 35.0% | |
| TCAAGGATATTTGCACATAG+TGG | - | chr1.4:28169792-28169811 | None:intergenic | 35.0% | |
| TCTTATCAAACTACATGCGT+GGG | + | chr1.4:28171141-28171160 | MS.gene073861:CDS | 35.0% | |
| TGACCTCCTGTTAAAAAGTA+TGG | - | chr1.4:28167747-28167766 | None:intergenic | 35.0% | |
| TGCAGCCAAACAATTGAAAT+TGG | - | chr1.4:28167450-28167469 | None:intergenic | 35.0% | |
| TGCAGTGTAATTATATGCGT+CGG | + | chr1.4:28167991-28168010 | MS.gene073861:intron | 35.0% | |
| TGGATGACAAAAATCGAGAA+GGG | + | chr1.4:28167579-28167598 | MS.gene073861:CDS | 35.0% | |
| TGTTGTCTTGGACATACTTA+TGG | + | chr1.4:28168551-28168570 | MS.gene073861:CDS | 35.0% | |
| TTAATCAACCAAAATAGGGG+GGG | - | chr1.4:28171397-28171416 | None:intergenic | 35.0% | |
| TTAGCGTTATCAACATGTGA+AGG | - | chr1.4:28171010-28171029 | None:intergenic | 35.0% | |
| TTCTAAGCTCTTCGAATTCT+TGG | + | chr1.4:28170390-28170409 | MS.gene073861:intron | 35.0% | |
| TTCTTATCAAACTACATGCG+TGG | + | chr1.4:28171140-28171159 | MS.gene073861:CDS | 35.0% | |
| TTGAGTATTTGACGACAGAT+TGG | - | chr1.4:28170290-28170309 | None:intergenic | 35.0% | |
| TTGGATGACAAAAATCGAGA+AGG | + | chr1.4:28167578-28167597 | MS.gene073861:CDS | 35.0% | |
| TTGTTGATGTCACTAAAAGC+TGG | + | chr1.4:28170696-28170715 | MS.gene073861:CDS | 35.0% | |
| ! | AAATTGGTCAAGGGATTTTG+AGG | + | chr1.4:28169323-28169342 | MS.gene073861:intron | 35.0% |
| ! | AATATTTTCAGATTGTGGGC+GGG | - | chr1.4:28168940-28168959 | None:intergenic | 35.0% |
| ! | CAATCTCCTGTATCCTTTTA+AGG | + | chr1.4:28171324-28171343 | MS.gene073861:intron | 35.0% |
| ! | CACCATTCAGGTTAATTATC+AGG | + | chr1.4:28168828-28168847 | MS.gene073861:intron | 35.0% |
| ! | TGCCTCAAATGTTTTCCTAA+TGG | + | chr1.4:28170742-28170761 | MS.gene073861:CDS | 35.0% |
| ! | TTAAGTTGCTTCTGTATAGG+TGG | + | chr1.4:28169253-28169272 | MS.gene073861:intron | 35.0% |
| ! | TTCCCTCATTGTTCCTTTTT+AGG | + | chr1.4:28170672-28170691 | MS.gene073861:intron | 35.0% |
| ! | TTGCATGAGCTATAGTTCTA+GGG | - | chr1.4:28170975-28170994 | None:intergenic | 35.0% |
| !! | ACAATCGTTGTTTTGTGAAC+AGG | + | chr1.4:28171422-28171441 | MS.gene073861:intron | 35.0% |
| !! | CAATCGTTGTTTTGTGAACA+GGG | + | chr1.4:28171423-28171442 | MS.gene073861:intron | 35.0% |
| !! | CAGTTATGCTATGTTTTTGC+AGG | + | chr1.4:28169467-28169486 | MS.gene073861:intron | 35.0% |
| !! | TTTTGAGGACATTGATGTTG+AGG | + | chr1.4:28169338-28169357 | MS.gene073861:intron | 35.0% |
| !!! | AGGTTTTGGGCATATTCAAA+AGG | + | chr1.4:28170138-28170157 | MS.gene073861:intron | 35.0% |
| !!! | CAGCTTTGAACAAACTTTTG+TGG | + | chr1.4:28167383-28167402 | MS.gene073861:intron | 35.0% |
| !!! | GGTTTTGGGCATATTCAAAA+GGG | + | chr1.4:28170139-28170158 | MS.gene073861:intron | 35.0% |
| !!! | GTTTCCTGATTTTTGAAACC+AGG | + | chr1.4:28168664-28168683 | MS.gene073861:intron | 35.0% |
| AAACTTCATCTGAGTCAAGC+TGG | - | chr1.4:28167280-28167299 | None:intergenic | 40.0% | |
| ACAAATATGGATATGCTGCC+TGG | - | chr1.4:28168480-28168499 | None:intergenic | 40.0% | |
| ACCCCTTCGTCTAATTTAGA+AGG | + | chr1.4:28168277-28168296 | MS.gene073861:CDS | 40.0% | |
| ACTACACATCAGTGTCTTTG+GGG | - | chr1.4:28167529-28167548 | None:intergenic | 40.0% | |
| AGAAACCCAGTAATTAAGGG+GGG | - | chr1.4:28169677-28169696 | None:intergenic | 40.0% | |
| AGACTACACATCAGTGTCTT+TGG | - | chr1.4:28167531-28167550 | None:intergenic | 40.0% | |
| AGAGAAATCTACATCCTTGC+TGG | + | chr1.4:28167622-28167641 | MS.gene073861:CDS | 40.0% | |
| AGAGAATAGCATCTACCACA+GGG | + | chr1.4:28168691-28168710 | MS.gene073861:CDS | 40.0% | |
| AGAGATTGAGCCATATAGGA+AGG | + | chr1.4:28166952-28166971 | MS.gene073861:CDS | 40.0% | |
| AGATGCTATTCTCTCTTTCC+TGG | - | chr1.4:28168685-28168704 | None:intergenic | 40.0% | |
| ATAGATTCTGGCAGATGCAA+TGG | + | chr1.4:28168132-28168151 | MS.gene073861:intron | 40.0% | |
| ATGACAAAAATCGAGAAGGG+AGG | + | chr1.4:28167582-28167601 | MS.gene073861:CDS | 40.0% | |
| ATGATTCAGTATGAGACTCG+AGG | - | chr1.4:28169997-28170016 | None:intergenic | 40.0% | |
| ATGTATCCACGAGATTGGAT+AGG | - | chr1.4:28170113-28170132 | None:intergenic | 40.0% | |
| ATTGATGTTGAGGAGAACCA+AGG | + | chr1.4:28169348-28169367 | MS.gene073861:intron | 40.0% | |
| ATTTCCACAAGCAACACAGA+TGG | + | chr1.4:28167805-28167824 | MS.gene073861:CDS | 40.0% | |
| CAATTTGACGGAGTCTTCAA+AGG | + | chr1.4:28170366-28170385 | MS.gene073861:intron | 40.0% | |
| CCACCTTCTAAATTAGACGA+AGG | - | chr1.4:28168283-28168302 | None:intergenic | 40.0% | |
| CCCTAGAAACCCAGTAATTA+AGG | - | chr1.4:28169681-28169700 | None:intergenic | 40.0% | |
| CCCTTAATTACTGGGTTTCT+AGG | + | chr1.4:28169677-28169696 | MS.gene073861:intron | 40.0% | |
| CCTTCGTCTAATTTAGAAGG+TGG | + | chr1.4:28168280-28168299 | MS.gene073861:CDS | 40.0% | |
| CGTCAACATATTTACTGGAG+AGG | + | chr1.4:28167772-28167791 | MS.gene073861:CDS | 40.0% | |
| CTACAAAACTGATGTGCACA+TGG | - | chr1.4:28170221-28170240 | None:intergenic | 40.0% | |
| CTTGAAACGCATTCAAAACC+AGG | + | chr1.4:28168459-28168478 | MS.gene073861:CDS | 40.0% | |
| GAACAGAACGTGTGAAGTAA+AGG | - | chr1.4:28169223-28169242 | None:intergenic | 40.0% | |
| GACTACACATCAGTGTCTTT+GGG | - | chr1.4:28167530-28167549 | None:intergenic | 40.0% | |
| GATCTGTTGGAGAATCATTG+AGG | + | chr1.4:28170478-28170497 | MS.gene073861:intron | 40.0% | |
| GCTTTCTATCCAGAATAGCT+TGG | + | chr1.4:28169078-28169097 | MS.gene073861:intron | 40.0% | |
| GGGTCACATGTCCAAAAAAA+AGG | + | chr1.4:28171345-28171364 | MS.gene073861:intron | 40.0% | |
| GGTGAGATTCCTCTCTAATT+AGG | + | chr1.4:28168345-28168364 | MS.gene073861:intron | 40.0% | |
| GTGAACAGTCAGAATCTGAA+CGG | + | chr1.4:28169534-28169553 | MS.gene073861:intron | 40.0% | |
| GTGCAACATACTGCTCAAAT+TGG | - | chr1.4:28169753-28169772 | None:intergenic | 40.0% | |
| GTGCACATGGTAGTAAAAAC+AGG | - | chr1.4:28170208-28170227 | None:intergenic | 40.0% | |
| TAATCAACCAAAATAGGGGG+GGG | - | chr1.4:28171396-28171415 | None:intergenic | 40.0% | |
| TAGATTCTGGCAGATGCAAT+GGG | + | chr1.4:28168133-28168152 | MS.gene073861:intron | 40.0% | |
| TCCTGTCAATAGCGAAGAAA+AGG | + | chr1.4:28167307-28167326 | MS.gene073861:CDS | 40.0% | |
| TCTTTGATCACCTGCTCATA+GGG | - | chr1.4:28169297-28169316 | None:intergenic | 40.0% | |
| TGAAAATGTAGGATCCATGG+TGG | + | chr1.4:28170839-28170858 | MS.gene073861:intron | 40.0% | |
| TGAACAGTCAGAATCTGAAC+GGG | + | chr1.4:28169535-28169554 | MS.gene073861:intron | 40.0% | |
| TGAGGATGAACAAGCACTTT+CGG | + | chr1.4:28167357-28167376 | MS.gene073861:CDS | 40.0% | |
| TGATCAAAGAGCCCTGAAAT+TGG | + | chr1.4:28169307-28169326 | MS.gene073861:intron | 40.0% | |
| TGATTCTTAGTAATCCAGGC+AGG | + | chr1.4:28168184-28168203 | MS.gene073861:intron | 40.0% | |
| TGCTAGAGATTGAGCCATAT+AGG | + | chr1.4:28166948-28166967 | MS.gene073861:CDS | 40.0% | |
| TGTATCCACGAGATTGGATA+GGG | - | chr1.4:28170112-28170131 | None:intergenic | 40.0% | |
| TGTGACCCTTAAAAGGATAC+AGG | - | chr1.4:28171333-28171352 | None:intergenic | 40.0% | |
| TGTTTCCCCCCTTAATTACT+GGG | + | chr1.4:28169669-28169688 | MS.gene073861:intron | 40.0% | |
| TTGATGTCACTAAAAGCTGG+TGG | + | chr1.4:28170699-28170718 | MS.gene073861:CDS | 40.0% | |
| TTGGACATGTGACCCTTAAA+AGG | - | chr1.4:28171340-28171359 | None:intergenic | 40.0% | |
| TTGTTTCCCCCCTTAATTAC+TGG | + | chr1.4:28169668-28169687 | MS.gene073861:intron | 40.0% | |
| TTTGAGCAGTATGTTGCACA+AGG | + | chr1.4:28169754-28169773 | MS.gene073861:CDS | 40.0% | |
| ! | ACCTTTTCTTCGCTATTGAC+AGG | - | chr1.4:28167311-28167330 | None:intergenic | 40.0% |
| ! | AGAGTGCCTATTCAATTGCT+GGG | + | chr1.4:28170241-28170260 | MS.gene073861:intron | 40.0% |
| ! | ATATTTTCAGATTGTGGGCG+GGG | - | chr1.4:28168939-28168958 | None:intergenic | 40.0% |
| ! | GGATACATCGATGAGGTTTT+GGG | + | chr1.4:28170125-28170144 | MS.gene073861:intron | 40.0% |
| ! | TGGATACATCGATGAGGTTT+TGG | + | chr1.4:28170124-28170143 | MS.gene073861:intron | 40.0% |
| !! | AGCTATAGTTCTAGGGAAGT+TGG | - | chr1.4:28170968-28170987 | None:intergenic | 40.0% |
| !! | ATTGAATATCAGTTGGTGGC+AGG | - | chr1.4:28169505-28169524 | None:intergenic | 40.0% |
| !! | GACAACTTACTTTAGCTCTC+AGG | - | chr1.4:28169581-28169600 | None:intergenic | 40.0% |
| !! | GCACTGATTCTTAGTAATCC+AGG | + | chr1.4:28168180-28168199 | MS.gene073861:intron | 40.0% |
| !! | GCTATAGTTCTAGGGAAGTT+GGG | - | chr1.4:28170967-28170986 | None:intergenic | 40.0% |
| !! | TCTGTATAGGTGGACTAAGT+TGG | + | chr1.4:28169263-28169282 | MS.gene073861:intron | 40.0% |
| !! | TTGTCTGGAACCTCTTTTTC+TGG | + | chr1.4:28169034-28169053 | MS.gene073861:intron | 40.0% |
| !!! | ATCCGTTTTTGGTCATGAGT+CGG | + | chr1.4:28169845-28169864 | MS.gene073861:intron | 40.0% |
| AACAGGGAACAGTGGAAGAT+CGG | + | chr1.4:28171439-28171458 | MS.gene073861:intron | 45.0% | |
| AAGAGCCCTGAAATTGGTCA+AGG | + | chr1.4:28169313-28169332 | MS.gene073861:intron | 45.0% | |
| ACCAGAGTCAAGCTCTGTAT+TGG | + | chr1.4:28167559-28167578 | MS.gene073861:CDS | 45.0% | |
| AGAGCCCTGAAATTGGTCAA+GGG | + | chr1.4:28169314-28169333 | MS.gene073861:intron | 45.0% | |
| AGGAAATGAAGGCTCGAAAG+CGG | + | chr1.4:28167076-28167095 | MS.gene073861:CDS | 45.0% | |
| ATATTGTAGGCTGACCAGCA+AGG | - | chr1.4:28167639-28167658 | None:intergenic | 45.0% | |
| ATCGTATTGGGCAAAAGCGA+AGG | + | chr1.4:28170897-28170916 | MS.gene073861:CDS | 45.0% | |
| ATCTCGTGGATACATCGATG+AGG | + | chr1.4:28170118-28170137 | MS.gene073861:intron | 45.0% | |
| CAACCTATGAAGCACGGATA+CGG | + | chr1.4:28167893-28167912 | MS.gene073861:intron | 45.0% | |
| CATCGATGTATCCACGAGAT+TGG | - | chr1.4:28170118-28170137 | None:intergenic | 45.0% | |
| CCGTTTCAACCTATGAAGCA+CGG | + | chr1.4:28167887-28167906 | MS.gene073861:intron | 45.0% | |
| CTCTTTGATCACCTGCTCAT+AGG | - | chr1.4:28169298-28169317 | None:intergenic | 45.0% | |
| CTGTTGGAGAATCATTGAGG+AGG | + | chr1.4:28170481-28170500 | MS.gene073861:intron | 45.0% | |
| GAATCTGAACGGGACTTCTA+TGG | + | chr1.4:28169545-28169564 | MS.gene073861:CDS | 45.0% | |
| GACTCATGACCAAAAACGGA+TGG | - | chr1.4:28169846-28169865 | None:intergenic | 45.0% | |
| GAGAGAATAGCATCTACCAC+AGG | + | chr1.4:28168690-28168709 | MS.gene073861:CDS | 45.0% | |
| GAGGAGAACCAAGGAAACAA+AGG | + | chr1.4:28169357-28169376 | MS.gene073861:intron | 45.0% | |
| GAGTGCCTATTCAATTGCTG+GGG | + | chr1.4:28170242-28170261 | MS.gene073861:intron | 45.0% | |
| GCAGTATGTTGCACAAGGAA+AGG | + | chr1.4:28169759-28169778 | MS.gene073861:CDS | 45.0% | |
| GTCTAACTGGAACACCATTC+AGG | + | chr1.4:28168816-28168835 | MS.gene073861:intron | 45.0% | |
| GTGAAAAAGGTCAGCTACTC+AGG | - | chr1.4:28170649-28170668 | None:intergenic | 45.0% | |
| GTTTGTCCTATGGCGTTGTT+GGG | + | chr1.4:28168313-28168332 | MS.gene073861:CDS | 45.0% | |
| TACAGAGCTTGACTCTGGTA+AGG | - | chr1.4:28167558-28167577 | None:intergenic | 45.0% | |
| TAGCACCACTCTGTACCATT+GGG | - | chr1.4:28168718-28168737 | None:intergenic | 45.0% | |
| TCAAACCCTATCCAATCTCG+TGG | + | chr1.4:28170104-28170123 | MS.gene073861:intron | 45.0% | |
| TCCAATACAGAGCTTGACTC+TGG | - | chr1.4:28167563-28167582 | None:intergenic | 45.0% | |
| TCGAAGTCAGAAGACAGTGA+TGG | + | chr1.4:28168207-28168226 | MS.gene073861:CDS | 45.0% | |
| TCGTATTGGGCAAAAGCGAA+GGG | + | chr1.4:28170898-28170917 | MS.gene073861:CDS | 45.0% | |
| TCTGCTCAAGTCTGCATACT+TGG | - | chr1.4:28169960-28169979 | None:intergenic | 45.0% | |
| TGGAGAATCATTGAGGAGGA+GGG | + | chr1.4:28170485-28170504 | MS.gene073861:intron | 45.0% | |
| TGGTACCCCAGCAATTGAAT+AGG | - | chr1.4:28170250-28170269 | None:intergenic | 45.0% | |
| TGTTCATCCTCAGTTGTTGC+TGG | - | chr1.4:28167349-28167368 | None:intergenic | 45.0% | |
| TGTTTGTCCTATGGCGTTGT+TGG | + | chr1.4:28168312-28168331 | MS.gene073861:CDS | 45.0% | |
| TTCGAGCCTTCATTTCCTCA+GGG | - | chr1.4:28167074-28167093 | None:intergenic | 45.0% | |
| TTGGAGAATCATTGAGGAGG+AGG | + | chr1.4:28170484-28170503 | MS.gene073861:intron | 45.0% | |
| TTTCACCCCTGAGGAAATGA+AGG | + | chr1.4:28167065-28167084 | MS.gene073861:CDS | 45.0% | |
| TTTCGAGCCTTCATTTCCTC+AGG | - | chr1.4:28167075-28167094 | None:intergenic | 45.0% | |
| ! | AATTGCTGGGGTACCATCAA+TGG | + | chr1.4:28170254-28170273 | MS.gene073861:intron | 45.0% |
| ! | ATAGGGTTTGAAGCAGAAGC+GGG | - | chr1.4:28170095-28170114 | None:intergenic | 45.0% |
| ! | ATTGCTGGGGTACCATCAAT+GGG | + | chr1.4:28170255-28170274 | MS.gene073861:intron | 45.0% |
| ! | CCGTGCTTCATAGGTTGAAA+CGG | - | chr1.4:28167890-28167909 | None:intergenic | 45.0% |
| ! | GATAGGGTTTGAAGCAGAAG+CGG | - | chr1.4:28170096-28170115 | None:intergenic | 45.0% |
| ! | GTTTTGTGAACAGGGAACAG+TGG | + | chr1.4:28171431-28171450 | MS.gene073861:intron | 45.0% |
| ! | TTGGTGGCAGGACAAGTATA+GGG | - | chr1.4:28169493-28169512 | None:intergenic | 45.0% |
| !! | CACCGACTCATGACCAAAAA+CGG | - | chr1.4:28169850-28169869 | None:intergenic | 45.0% |
| !! | GAGAGTGCCTATTCAATTGC+TGG | + | chr1.4:28170240-28170259 | MS.gene073861:intron | 45.0% |
| !! | TAGTTCTAGGGAAGTTGGGA+AGG | - | chr1.4:28170963-28170982 | None:intergenic | 45.0% |
| !! | TTTTTGGTCATGAGTCGGTG+TGG | + | chr1.4:28169850-28169869 | MS.gene073861:intron | 45.0% |
| AGCAGAAGCGGGAATTCTGT+AGG | - | chr1.4:28170084-28170103 | None:intergenic | 50.0% | |
| AGCTGCAGAAGTCTTTGACC+TGG | + | chr1.4:28167406-28167425 | MS.gene073861:intron | 50.0% | |
| ATCAAACTACATGCGTGGGC+CGG | + | chr1.4:28171145-28171164 | MS.gene073861:CDS | 50.0% | |
| ATGAAGCACGGATACGGACA+CGG | + | chr1.4:28167899-28167918 | MS.gene073861:intron | 50.0% | |
| CAAGCAACACAGATGGCAAG+AGG | + | chr1.4:28167812-28167831 | MS.gene073861:CDS | 50.0% | |
| CACTGCTTGTGCTAGTGATG+TGG | + | chr1.4:28170791-28170810 | MS.gene073861:intron | 50.0% | |
| CTAGCACCACTCTGTACCAT+TGG | - | chr1.4:28168719-28168738 | None:intergenic | 50.0% | |
| GAGAATCATTGAGGAGGAGG+GGG | + | chr1.4:28170487-28170506 | MS.gene073861:intron | 50.0% | |
| GGAAATGAAGGCTCGAAAGC+GGG | + | chr1.4:28167077-28167096 | MS.gene073861:CDS | 50.0% | |
| GGAGAATCATTGAGGAGGAG+GGG | + | chr1.4:28170486-28170505 | MS.gene073861:intron | 50.0% | |
| GGTTCAAAAGCCCTATGAGC+AGG | + | chr1.4:28169284-28169303 | MS.gene073861:CDS | 50.0% | |
| GTGTTCCAGTTAGACACCAG+CGG | - | chr1.4:28168811-28168830 | None:intergenic | 50.0% | |
| GTTGCGGAGCAAGCAATATG+AGG | + | chr1.4:28170870-28170889 | MS.gene073861:CDS | 50.0% | |
| TATGAAGCACGGACACTCCT+TGG | - | chr1.4:28168069-28168088 | None:intergenic | 50.0% | |
| TCCATCGGAAAGCCCATTCA+AGG | + | chr1.4:28170330-28170349 | MS.gene073861:intron | 50.0% | |
| TCCTCAGTTGTTGCTGGAAG+TGG | - | chr1.4:28167343-28167362 | None:intergenic | 50.0% | |
| TCGAGCCTTCATTTCCTCAG+GGG | - | chr1.4:28167073-28167092 | None:intergenic | 50.0% | |
| TCTTCTTGCGTGTGCAACCT+TGG | + | chr1.4:28169121-28169140 | MS.gene073861:CDS | 50.0% | |
| TGCAGAAGTCTTTGACCTGG+AGG | + | chr1.4:28167409-28167428 | MS.gene073861:intron | 50.0% | |
| TGGACACTACCACCCATTGA+TGG | - | chr1.4:28170270-28170289 | None:intergenic | 50.0% | |
| TGTCCGTATCCGTGCTTCAT+AGG | - | chr1.4:28167899-28167918 | None:intergenic | 50.0% | |
| ! | ACCTTGAATGGGCTTTCCGA+TGG | - | chr1.4:28170334-28170353 | None:intergenic | 50.0% |
| ! | ATTTAGCTGTGTCGGCGAGT+CGG | - | chr1.4:28167952-28167971 | None:intergenic | 50.0% |
| ! | CATGGTGGAATCTGCAGTTG+CGG | + | chr1.4:28170854-28170873 | MS.gene073861:CDS | 50.0% |
| ! | GTGCTGCAACCATCCGTTTT+TGG | + | chr1.4:28169834-28169853 | MS.gene073861:intron | 50.0% |
| ! | TTGACTTCCCCCCCCTATTT+TGG | + | chr1.4:28171386-28171405 | MS.gene073861:intron | 50.0% |
| !! | CCTCAGCACCTGGCTTTTAT+GGG | - | chr1.4:28168763-28168782 | None:intergenic | 50.0% |
| !! | CTTGCCATCTGTGTTGCTTG+TGG | - | chr1.4:28167812-28167831 | None:intergenic | 50.0% |
| !! | GTTGGTGGCAGGACAAGTAT+AGG | - | chr1.4:28169494-28169513 | None:intergenic | 50.0% |
| !! | TATATGCGTCGGTGTCGTGT+CGG | + | chr1.4:28168002-28168021 | MS.gene073861:intron | 50.0% |
| ACACGACACGTGTCTGACAC+GGG | + | chr1.4:28168031-28168050 | MS.gene073861:intron | 55.0% | |
| ACGGGGACACACCTTATCCA+AGG | + | chr1.4:28168049-28168068 | MS.gene073861:intron | 55.0% | |
| AGGGTCCCAATGGTACAGAG+TGG | + | chr1.4:28168710-28168729 | MS.gene073861:CDS | 55.0% | |
| CACGGACACTTGACACGACA+CGG | + | chr1.4:28167923-28167942 | MS.gene073861:intron | 55.0% | |
| CACTGACCCAACAACGCCAT+AGG | - | chr1.4:28168322-28168341 | None:intergenic | 55.0% | |
| CATCTACCACAGGGTCCCAA+TGG | + | chr1.4:28168700-28168719 | MS.gene073861:CDS | 55.0% | |
| CGCAACTGCAGATTCCACCA+TGG | - | chr1.4:28170856-28170875 | None:intergenic | 55.0% | |
| CTATGGCGTTGTTGGGTCAG+TGG | + | chr1.4:28168320-28168339 | MS.gene073861:CDS | 55.0% | |
| GACACGACACGTGTCTGACA+CGG | + | chr1.4:28168030-28168049 | MS.gene073861:intron | 55.0% | |
| GCAACACAGATGGCAAGAGG+AGG | + | chr1.4:28167815-28167834 | MS.gene073861:CDS | 55.0% | |
| GCAATAGTAGCCTCAGCACC+TGG | - | chr1.4:28168773-28168792 | None:intergenic | 55.0% | |
| GCACGGACACTCCTTGGATA+AGG | - | chr1.4:28168063-28168082 | None:intergenic | 55.0% | |
| GCCACTTCCAGCAACAACTG+AGG | + | chr1.4:28167339-28167358 | MS.gene073861:CDS | 55.0% | |
| TCATTGAGGAGGAGGGGGAT+AGG | + | chr1.4:28170492-28170511 | MS.gene073861:intron | 55.0% | |
| TCTGTACCATTGGGACCCTG+TGG | - | chr1.4:28168709-28168728 | None:intergenic | 55.0% | |
| TCTTCTGACTTCGACCTGCC+TGG | - | chr1.4:28168201-28168220 | None:intergenic | 55.0% | |
| ! | CCCATAAAAGCCAGGTGCTG+AGG | + | chr1.4:28168760-28168779 | MS.gene073861:intron | 55.0% |
| ! | CTAGGCTGATTTCACCCCTG+AGG | + | chr1.4:28167056-28167075 | MS.gene073861:intron | 55.0% |
| !! | GCCTCAGCACCTGGCTTTTA+TGG | - | chr1.4:28168764-28168783 | None:intergenic | 55.0% |
| CACGACACGTGTCTGACACG+GGG | + | chr1.4:28168032-28168051 | MS.gene073861:intron | 60.0% | |
| CACGGATACGGACACGGACA+CGG | + | chr1.4:28167905-28167924 | MS.gene073861:intron | 60.0% | |
| CACTGCCGCTGGTGTCTAAC+TGG | + | chr1.4:28168803-28168822 | MS.gene073861:intron | 60.0% | |
| CTCTGTCTTCACACTGCCGC+TGG | + | chr1.4:28168792-28168811 | MS.gene073861:intron | 60.0% | |
| GGCGTTGTTGGGTCAGTGGA+AGG | + | chr1.4:28168324-28168343 | MS.gene073861:CDS | 60.0% | |
| TACCACTGCCAGCTGCACCA+AGG | - | chr1.4:28169141-28169160 | None:intergenic | 60.0% | |
| ! | AACCTTGGTGCAGCTGGCAG+TGG | + | chr1.4:28169136-28169155 | MS.gene073861:CDS | 60.0% |
| ! | GCTGGGGTACCATCAATGGG+TGG | + | chr1.4:28170258-28170277 | MS.gene073861:intron | 60.0% |
| ! | GTGTGCAACCTTGGTGCAGC+TGG | + | chr1.4:28169130-28169149 | MS.gene073861:CDS | 60.0% |
| !! | CGTCGGTGTCGTGTCGGTGT+CGG | + | chr1.4:28168008-28168027 | MS.gene073861:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 28166947 | 28171494 | 28166947 | ID=MS.gene073861 |
| chr1.4 | mRNA | 28166947 | 28171494 | 28166947 | ID=MS.gene073861.t1;Parent=MS.gene073861 |
| chr1.4 | exon | 28166947 | 28166973 | 28166947 | ID=MS.gene073861.t1.exon1;Parent=MS.gene073861.t1 |
| chr1.4 | CDS | 28166947 | 28166973 | 28166947 | ID=cds.MS.gene073861.t1;Parent=MS.gene073861.t1 |
| chr1.4 | exon | 28167060 | 28167107 | 28167060 | ID=MS.gene073861.t1.exon2;Parent=MS.gene073861.t1 |
| chr1.4 | CDS | 28167060 | 28167107 | 28167060 | ID=cds.MS.gene073861.t1;Parent=MS.gene073861.t1 |
| chr1.4 | exon | 28167281 | 28167380 | 28167281 | ID=MS.gene073861.t1.exon3;Parent=MS.gene073861.t1 |
| chr1.4 | CDS | 28167281 | 28167380 | 28167281 | ID=cds.MS.gene073861.t1;Parent=MS.gene073861.t1 |
| chr1.4 | exon | 28167517 | 28167668 | 28167517 | ID=MS.gene073861.t1.exon4;Parent=MS.gene073861.t1 |
| chr1.4 | CDS | 28167517 | 28167668 | 28167517 | ID=cds.MS.gene073861.t1;Parent=MS.gene073861.t1 |
| chr1.4 | exon | 28167760 | 28167838 | 28167760 | ID=MS.gene073861.t1.exon5;Parent=MS.gene073861.t1 |
| chr1.4 | CDS | 28167760 | 28167838 | 28167760 | ID=cds.MS.gene073861.t1;Parent=MS.gene073861.t1 |
| chr1.4 | exon | 28168206 | 28168345 | 28168206 | ID=MS.gene073861.t1.exon6;Parent=MS.gene073861.t1 |
| chr1.4 | CDS | 28168206 | 28168345 | 28168206 | ID=cds.MS.gene073861.t1;Parent=MS.gene073861.t1 |
| chr1.4 | exon | 28168453 | 28168598 | 28168453 | ID=MS.gene073861.t1.exon7;Parent=MS.gene073861.t1 |
| chr1.4 | CDS | 28168453 | 28168598 | 28168453 | ID=cds.MS.gene073861.t1;Parent=MS.gene073861.t1 |
| chr1.4 | exon | 28168686 | 28168773 | 28168686 | ID=MS.gene073861.t1.exon8;Parent=MS.gene073861.t1 |
| chr1.4 | CDS | 28168686 | 28168773 | 28168686 | ID=cds.MS.gene073861.t1;Parent=MS.gene073861.t1 |
| chr1.4 | exon | 28169091 | 28169157 | 28169091 | ID=MS.gene073861.t1.exon9;Parent=MS.gene073861.t1 |
| chr1.4 | CDS | 28169091 | 28169157 | 28169091 | ID=cds.MS.gene073861.t1;Parent=MS.gene073861.t1 |
| chr1.4 | exon | 28169272 | 28169305 | 28169272 | ID=MS.gene073861.t1.exon10;Parent=MS.gene073861.t1 |
| chr1.4 | CDS | 28169272 | 28169305 | 28169272 | ID=cds.MS.gene073861.t1;Parent=MS.gene073861.t1 |
| chr1.4 | exon | 28169542 | 28169590 | 28169542 | ID=MS.gene073861.t1.exon11;Parent=MS.gene073861.t1 |
| chr1.4 | CDS | 28169542 | 28169590 | 28169542 | ID=cds.MS.gene073861.t1;Parent=MS.gene073861.t1 |
| chr1.4 | exon | 28169748 | 28169824 | 28169748 | ID=MS.gene073861.t1.exon12;Parent=MS.gene073861.t1 |
| chr1.4 | CDS | 28169748 | 28169824 | 28169748 | ID=cds.MS.gene073861.t1;Parent=MS.gene073861.t1 |
| chr1.4 | exon | 28169943 | 28170023 | 28169943 | ID=MS.gene073861.t1.exon13;Parent=MS.gene073861.t1 |
| chr1.4 | CDS | 28169943 | 28170023 | 28169943 | ID=cds.MS.gene073861.t1;Parent=MS.gene073861.t1 |
| chr1.4 | exon | 28170694 | 28170763 | 28170694 | ID=MS.gene073861.t1.exon14;Parent=MS.gene073861.t1 |
| chr1.4 | CDS | 28170694 | 28170763 | 28170694 | ID=cds.MS.gene073861.t1;Parent=MS.gene073861.t1 |
| chr1.4 | exon | 28170850 | 28170946 | 28170850 | ID=MS.gene073861.t1.exon15;Parent=MS.gene073861.t1 |
| chr1.4 | CDS | 28170850 | 28170946 | 28170850 | ID=cds.MS.gene073861.t1;Parent=MS.gene073861.t1 |
| chr1.4 | exon | 28171138 | 28171217 | 28171138 | ID=MS.gene073861.t1.exon16;Parent=MS.gene073861.t1 |
| chr1.4 | CDS | 28171138 | 28171217 | 28171138 | ID=cds.MS.gene073861.t1;Parent=MS.gene073861.t1 |
| chr1.4 | exon | 28171444 | 28171494 | 28171444 | ID=MS.gene073861.t1.exon17;Parent=MS.gene073861.t1 |
| chr1.4 | CDS | 28171444 | 28171494 | 28171444 | ID=cds.MS.gene073861.t1;Parent=MS.gene073861.t1 |
| Gene Sequence |
| Protein sequence |
