Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073976.t1 | XP_024632961.1 | 79.7 | 772 | 88 | 5 | 1 | 703 | 1 | 772 | 0.00E+00 | 1210.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073976.t1 | Q9SZL8 | 24.8 | 636 | 364 | 14 | 32 | 621 | 70 | 637 | 2.6e-50 | 201.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073976.t1 | D3YBB9 | 72.4 | 753 | 147 | 5 | 1 | 702 | 49 | 791 | 0.0e+00 | 1081.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene073976.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073976.t1 | MTR_0558s0020 | 76.014 | 296 | 38 | 2 | 1 | 263 | 1 | 296 | 5.94e-158 | 459 |
MS.gene073976.t1 | MTR_1g083640 | 71.479 | 284 | 33 | 2 | 1 | 236 | 1 | 284 | 5.79e-138 | 407 |
MS.gene073976.t1 | MTR_8g446020 | 63.051 | 295 | 38 | 2 | 1 | 263 | 1 | 256 | 3.24e-119 | 358 |
MS.gene073976.t1 | MTR_2g014100 | 68.571 | 245 | 36 | 2 | 1 | 204 | 1 | 245 | 3.93e-109 | 332 |
MS.gene073976.t1 | MTR_6g090505 | 69.620 | 237 | 40 | 1 | 65 | 269 | 1 | 237 | 2.44e-108 | 334 |
MS.gene073976.t1 | MTR_6g090505 | 77.551 | 49 | 11 | 0 | 523 | 571 | 314 | 362 | 1.83e-11 | 67.0 |
MS.gene073976.t1 | MTR_0337s0060 | 59.136 | 301 | 26 | 3 | 403 | 703 | 21 | 224 | 1.69e-105 | 322 |
MS.gene073976.t1 | MTR_0337s0040 | 59.615 | 260 | 33 | 3 | 1 | 227 | 1 | 221 | 1.66e-90 | 283 |
MS.gene073976.t1 | MTR_3g008240 | 67.980 | 203 | 32 | 2 | 1 | 170 | 1 | 203 | 1.51e-85 | 269 |
MS.gene073976.t1 | MTR_4g040430 | 67.677 | 198 | 36 | 2 | 1 | 170 | 1 | 198 | 3.24e-83 | 262 |
MS.gene073976.t1 | MTR_5g071590 | 72.561 | 164 | 32 | 2 | 1 | 151 | 1 | 164 | 3.20e-77 | 246 |
MS.gene073976.t1 | MTR_3g028680 | 83.846 | 130 | 21 | 0 | 574 | 703 | 1 | 130 | 9.96e-70 | 226 |
MS.gene073976.t1 | MTR_4g133495 | 63.429 | 175 | 38 | 2 | 532 | 703 | 88 | 239 | 1.55e-65 | 219 |
MS.gene073976.t1 | MTR_4g133340 | 63.429 | 175 | 38 | 2 | 532 | 703 | 88 | 239 | 1.55e-65 | 219 |
MS.gene073976.t1 | MTR_2g067090 | 78.740 | 127 | 27 | 0 | 577 | 703 | 99 | 225 | 2.50e-61 | 208 |
MS.gene073976.t1 | MTR_1281s0010 | 79.817 | 109 | 22 | 0 | 19 | 127 | 1 | 109 | 4.64e-56 | 187 |
MS.gene073976.t1 | MTR_1g055240 | 65.493 | 142 | 17 | 1 | 91 | 200 | 3 | 144 | 1.12e-55 | 187 |
MS.gene073976.t1 | MTR_0019s0290 | 61.184 | 152 | 27 | 1 | 82 | 201 | 9 | 160 | 4.80e-54 | 183 |
MS.gene073976.t1 | MTR_4g008820 | 83.750 | 80 | 12 | 1 | 1 | 79 | 125 | 204 | 7.05e-32 | 132 |
MS.gene073976.t1 | MTR_8g046060 | 76.136 | 88 | 12 | 1 | 1 | 79 | 91 | 178 | 1.07e-31 | 123 |
MS.gene073976.t1 | MTR_6g051425 | 28.302 | 318 | 165 | 7 | 40 | 309 | 22 | 324 | 1.71e-28 | 117 |
MS.gene073976.t1 | MTR_0337s0050 | 75.000 | 36 | 9 | 0 | 227 | 262 | 14 | 49 | 2.35e-13 | 66.2 |
MS.gene073976.t1 | MTR_1g070355 | 25.100 | 251 | 137 | 5 | 41 | 259 | 80 | 311 | 2.64e-13 | 73.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene073976.t1 | AT4G38180 | 24.409 | 635 | 368 | 14 | 32 | 621 | 70 | 637 | 3.01e-54 | 200 |
MS.gene073976.t1 | AT4G15090 | 24.394 | 660 | 400 | 15 | 50 | 674 | 66 | 661 | 5.97e-53 | 197 |
MS.gene073976.t1 | AT4G15090 | 24.394 | 660 | 400 | 15 | 50 | 674 | 66 | 661 | 5.97e-53 | 197 |
MS.gene073976.t1 | AT4G15090 | 24.394 | 660 | 400 | 15 | 50 | 674 | 66 | 661 | 5.97e-53 | 197 |
MS.gene073976.t1 | AT4G15090 | 24.394 | 660 | 400 | 15 | 50 | 674 | 66 | 661 | 5.97e-53 | 197 |
MS.gene073976.t1 | AT4G15090 | 24.394 | 660 | 400 | 15 | 50 | 674 | 66 | 661 | 5.97e-53 | 197 |
MS.gene073976.t1 | AT3G06250 | 24.917 | 606 | 342 | 16 | 34 | 617 | 189 | 703 | 1.56e-48 | 183 |
MS.gene073976.t1 | AT3G06250 | 24.917 | 606 | 342 | 16 | 34 | 617 | 189 | 703 | 1.56e-48 | 183 |
MS.gene073976.t1 | AT3G06250 | 24.917 | 606 | 342 | 16 | 34 | 617 | 189 | 703 | 1.56e-48 | 183 |
MS.gene073976.t1 | AT2G27110 | 24.168 | 691 | 426 | 17 | 4 | 675 | 23 | 634 | 2.00e-48 | 184 |
MS.gene073976.t1 | AT2G27110 | 24.168 | 691 | 426 | 17 | 4 | 675 | 23 | 634 | 2.00e-48 | 184 |
MS.gene073976.t1 | AT2G27110 | 25.919 | 544 | 326 | 13 | 151 | 675 | 4 | 489 | 2.28e-48 | 182 |
MS.gene073976.t1 | AT3G22170 | 22.869 | 704 | 427 | 20 | 1 | 664 | 32 | 659 | 4.22e-45 | 174 |
MS.gene073976.t1 | AT3G22170 | 22.869 | 704 | 427 | 20 | 1 | 664 | 32 | 659 | 4.22e-45 | 174 |
MS.gene073976.t1 | AT5G18960 | 23.878 | 624 | 349 | 19 | 24 | 617 | 200 | 727 | 1.49e-42 | 166 |
MS.gene073976.t1 | AT5G18960 | 23.878 | 624 | 349 | 19 | 24 | 617 | 200 | 727 | 1.49e-42 | 166 |
MS.gene073976.t1 | AT1G76320 | 23.249 | 671 | 387 | 20 | 50 | 676 | 12 | 598 | 4.95e-42 | 163 |
MS.gene073976.t1 | AT4G38170 | 25.986 | 431 | 249 | 14 | 203 | 618 | 24 | 399 | 1.57e-41 | 160 |
MS.gene073976.t1 | AT1G76320 | 23.249 | 671 | 387 | 20 | 50 | 676 | 12 | 598 | 1.71e-41 | 162 |
MS.gene073976.t1 | AT1G76320 | 23.249 | 671 | 387 | 20 | 50 | 676 | 12 | 598 | 1.93e-41 | 162 |
MS.gene073976.t1 | AT1G76320 | 23.249 | 671 | 387 | 20 | 50 | 676 | 12 | 598 | 1.93e-41 | 162 |
MS.gene073976.t1 | AT2G32250 | 23.677 | 718 | 426 | 22 | 1 | 699 | 8 | 622 | 2.63e-39 | 155 |
MS.gene073976.t1 | AT2G32250 | 23.955 | 718 | 424 | 22 | 1 | 699 | 8 | 622 | 3.52e-39 | 155 |
MS.gene073976.t1 | AT2G32250 | 23.955 | 718 | 424 | 22 | 1 | 699 | 8 | 622 | 3.52e-39 | 155 |
MS.gene073976.t1 | AT2G32250 | 23.955 | 718 | 424 | 22 | 1 | 699 | 8 | 622 | 3.52e-39 | 155 |
MS.gene073976.t1 | AT2G32250 | 23.955 | 718 | 424 | 22 | 1 | 699 | 8 | 622 | 3.68e-39 | 155 |
MS.gene073976.t1 | AT2G32250 | 23.955 | 718 | 424 | 22 | 1 | 699 | 8 | 622 | 3.68e-39 | 155 |
MS.gene073976.t1 | AT2G32250 | 24.041 | 678 | 397 | 20 | 41 | 699 | 3 | 581 | 8.88e-39 | 154 |
MS.gene073976.t1 | AT2G32250 | 24.041 | 678 | 397 | 20 | 41 | 699 | 3 | 581 | 1.03e-38 | 154 |
MS.gene073976.t1 | AT1G80010 | 22.862 | 643 | 349 | 21 | 41 | 618 | 101 | 661 | 1.19e-31 | 132 |
MS.gene073976.t1 | AT5G28530 | 23.101 | 645 | 343 | 22 | 40 | 616 | 60 | 619 | 1.58e-30 | 128 |
MS.gene073976.t1 | AT1G10240 | 26.998 | 463 | 255 | 17 | 173 | 615 | 205 | 604 | 6.15e-30 | 126 |
MS.gene073976.t1 | AT1G10240 | 26.998 | 463 | 255 | 17 | 173 | 615 | 205 | 604 | 6.15e-30 | 126 |
MS.gene073976.t1 | AT5G28530 | 22.946 | 645 | 340 | 23 | 40 | 616 | 60 | 615 | 6.57e-30 | 126 |
MS.gene073976.t1 | AT5G28530 | 22.946 | 645 | 340 | 23 | 40 | 616 | 60 | 615 | 6.57e-30 | 126 |
MS.gene073976.t1 | AT1G52520 | 22.061 | 621 | 368 | 22 | 41 | 618 | 91 | 638 | 3.92e-29 | 124 |
MS.gene073976.t1 | AT4G19990 | 24.460 | 417 | 280 | 12 | 41 | 439 | 41 | 440 | 6.52e-25 | 111 |
MS.gene073976.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 547 | 677 | 509 | 629 | 1.98e-12 | 71.2 |
MS.gene073976.t1 | AT4G19990 | 24.460 | 417 | 280 | 12 | 41 | 439 | 27 | 426 | 8.32e-25 | 110 |
MS.gene073976.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 547 | 677 | 495 | 615 | 1.88e-12 | 71.2 |
MS.gene073976.t1 | AT4G19990 | 24.460 | 417 | 280 | 12 | 41 | 439 | 27 | 426 | 8.32e-25 | 110 |
MS.gene073976.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 547 | 677 | 495 | 615 | 1.88e-12 | 71.2 |
MS.gene073976.t1 | AT4G19990 | 24.460 | 417 | 280 | 12 | 41 | 439 | 27 | 426 | 9.72e-25 | 110 |
MS.gene073976.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 547 | 677 | 495 | 615 | 2.05e-12 | 71.2 |
MS.gene073976.t1 | AT4G19990 | 24.460 | 417 | 280 | 12 | 41 | 439 | 27 | 426 | 1.31e-24 | 110 |
MS.gene073976.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 547 | 677 | 495 | 615 | 2.16e-12 | 71.2 |
MS.gene073976.t1 | AT4G19990 | 24.460 | 417 | 280 | 12 | 41 | 439 | 27 | 426 | 1.31e-24 | 110 |
MS.gene073976.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 547 | 677 | 495 | 615 | 2.16e-12 | 71.2 |
MS.gene073976.t1 | AT4G19990 | 27.612 | 268 | 175 | 5 | 187 | 439 | 106 | 369 | 1.35e-23 | 106 |
MS.gene073976.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 547 | 677 | 438 | 558 | 1.88e-12 | 71.2 |
Find 105 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 2.1:-30310819 | MS.gene073976:CDS |
CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 2.1:-30310552 | MS.gene073976:CDS |
TACATTTCAGCTGCCTTTCT+TGG | 0.197151 | 2.1:-30311100 | MS.gene073976:intron |
CAACAAGATTATGCTCTATT+TGG | 0.198611 | 2.1:-30311623 | MS.gene073976:CDS |
CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 2.1:-30311067 | MS.gene073976:CDS |
TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 2.1:+30310973 | None:intergenic |
GGTTTCAAATGTTGATGTTT+TGG | 0.317051 | 2.1:-30310255 | MS.gene073976:CDS |
TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 2.1:-30309838 | MS.gene073976:CDS |
AATCAGATTTCAACTACAAT+TGG | 0.330942 | 2.1:-30310778 | MS.gene073976:CDS |
GTCTTTAGTGCCAACATTCA+TGG | 0.339668 | 2.1:+30309962 | None:intergenic |
ACCAGCCTGGTCTGTGTATA+TGG | 0.341000 | 2.1:+30310955 | None:intergenic |
GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 2.1:+30311573 | None:intergenic |
GAGGGATAATCATGCTGATT+TGG | 0.346844 | 2.1:-30310519 | MS.gene073976:CDS |
TATGCATTGGTCTTCAGTTT+GGG | 0.370760 | 2.1:-30310678 | MS.gene073976:CDS |
CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 2.1:-30309846 | MS.gene073976:CDS |
AACAATAAATATCGGCCATT+AGG | 0.388497 | 2.1:-30311566 | MS.gene073976:intron |
TCATGCTGATTTGGACTTCA+AGG | 0.389304 | 2.1:-30310510 | MS.gene073976:CDS |
ACCGAACAAACAATAAATAT+CGG | 0.389395 | 2.1:-30311574 | MS.gene073976:CDS |
GTATGCATTGGTCTTCAGTT+TGG | 0.392120 | 2.1:-30310679 | MS.gene073976:CDS |
TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 2.1:+30312103 | None:intergenic |
GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 2.1:-30309813 | MS.gene073976:CDS |
CCATGATTCTTTATCACTAA+AGG | 0.406174 | 2.1:+30312342 | None:intergenic |
TAAAGAATCATGGAAGTCTT+TGG | 0.408500 | 2.1:-30312332 | MS.gene073976:CDS |
CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 2.1:-30310130 | MS.gene073976:CDS |
GATTATGATCTTCAAACCTT+GGG | 0.413114 | 2.1:+30310207 | None:intergenic |
ATAACACTGGATTCTCTGTT+AGG | 0.417808 | 2.1:-30312261 | MS.gene073976:CDS |
GGGTTGTCACAGTCGACATT+AGG | 0.419786 | 2.1:-30310172 | MS.gene073976:CDS |
CGATTATGATCTTCAAACCT+TGG | 0.425681 | 2.1:+30310206 | None:intergenic |
AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 2.1:-30312044 | MS.gene073976:CDS |
TGAATGTCTATAAGATATAT+AGG | 0.445219 | 2.1:-30312012 | MS.gene073976:CDS |
TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 2.1:+30310962 | None:intergenic |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 2.1:-30312061 | MS.gene073976:CDS |
CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 2.1:+30310029 | None:intergenic |
CGTTATGCTTGTAACAAAGA+AGG | 0.449439 | 2.1:-30312178 | MS.gene073976:CDS |
ATCTGAGAGTGGACAATTGA+CGG | 0.452529 | 2.1:-30312407 | MS.gene073976:CDS |
TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 2.1:-30310888 | MS.gene073976:CDS |
CTCCTCAAAATAGTATTTGA+AGG | 0.453936 | 2.1:+30310376 | None:intergenic |
ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 2.1:-30310129 | MS.gene073976:CDS |
GGCCTACTTCAGACTTTAAG+TGG | 0.462107 | 2.1:-30310724 | MS.gene073976:CDS |
CGCAAACACGTGTAGAAAGC+TGG | 0.465682 | 2.1:+30309895 | None:intergenic |
ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 2.1:-30312212 | MS.gene073976:CDS |
TTTGAGGAGGACACAACAAA+AGG | 0.469432 | 2.1:-30310362 | MS.gene073976:CDS |
ATCAGATTTCAACTACAATT+GGG | 0.481297 | 2.1:-30310777 | MS.gene073976:CDS |
TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 2.1:+30312067 | None:intergenic |
TTTAATTATGCATATAACAC+TGG | 0.485542 | 2.1:-30312274 | MS.gene073976:CDS |
TCTAATGACGACTCGTCAAA+AGG | 0.488508 | 2.1:-30311783 | MS.gene073976:CDS |
CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 2.1:-30312218 | MS.gene073976:CDS |
ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 2.1:+30311087 | None:intergenic |
CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 2.1:-30311770 | MS.gene073976:CDS |
ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 2.1:-30310538 | MS.gene073976:CDS |
GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 2.1:+30310458 | None:intergenic |
TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 2.1:+30311678 | None:intergenic |
CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 2.1:-30310691 | MS.gene073976:CDS |
ATCATAATCGACTTGATGAA+AGG | 0.507955 | 2.1:-30310193 | MS.gene073976:CDS |
TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 2.1:+30311812 | None:intergenic |
ATTGGTCTTCAGTTTGGGTG+AGG | 0.509410 | 2.1:-30310673 | MS.gene073976:CDS |
GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 2.1:+30310213 | None:intergenic |
CAAAATAGTATTTGAAGGAA+AGG | 0.519540 | 2.1:+30310381 | None:intergenic |
TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 2.1:+30310570 | None:intergenic |
TGTCTATAAGATATATAGGT+GGG | 0.523740 | 2.1:-30312008 | MS.gene073976:CDS |
TCATAATCGACTTGATGAAA+GGG | 0.526860 | 2.1:-30310192 | MS.gene073976:CDS |
TTGAGGAGGACACAACAAAA+GGG | 0.529908 | 2.1:-30310361 | MS.gene073976:CDS |
CTGAAATCTACCATGAATGT+TGG | 0.534154 | 2.1:-30309972 | MS.gene073976:CDS |
TAACAAAGAAGGTTTCAAGA+AGG | 0.538422 | 2.1:-30312167 | MS.gene073976:CDS |
AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 2.1:+30310575 | None:intergenic |
CCTTTAGTGATAAAGAATCA+TGG | 0.543522 | 2.1:-30312342 | MS.gene073976:CDS |
AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 2.1:-30312166 | MS.gene073976:CDS |
ACTTCAACAACGCACCAGCC+TGG | 0.557139 | 2.1:+30310942 | None:intergenic |
AATGAAGCTCTCTCGAAACC+AGG | 0.565261 | 2.1:-30311716 | MS.gene073976:CDS |
GGGTGAAGGTGTTGGAGGCA+CGG | 0.565649 | 2.1:-30311843 | MS.gene073976:CDS |
TACACGTGTTTGCGCAGATG+CGG | 0.571672 | 2.1:-30309886 | MS.gene073976:CDS |
GAGAGCATCTTATGAAGTGA+TGG | 0.575320 | 2.1:-30311864 | MS.gene073976:CDS |
GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 2.1:+30310457 | None:intergenic |
TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 2.1:+30310436 | None:intergenic |
TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 2.1:-30309845 | MS.gene073976:CDS |
ACCATATACACAGACCAGGC+TGG | 0.590176 | 2.1:-30310956 | MS.gene073976:intron |
ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 2.1:-30309850 | MS.gene073976:CDS |
GAATGAATTCAAGGAATGAG+TGG | 0.593229 | 2.1:+30309143 | None:intergenic |
TGAAGACTTAGAAGGCGTAA+CGG | 0.598405 | 2.1:+30309770 | None:intergenic |
TTGAAGGAAACCTTTCCCCA+AGG | 0.600566 | 2.1:-30310223 | MS.gene073976:CDS |
GAAGTGATGGGTGAAGGTGT+TGG | 0.603704 | 2.1:-30311851 | MS.gene073976:CDS |
GACGACTCGTCAAAAGGAGA+TGG | 0.604288 | 2.1:-30311777 | MS.gene073976:CDS |
ACGTGTTTGCGCAGATGCGG+AGG | 0.605934 | 2.1:-30309883 | MS.gene073976:CDS |
ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 2.1:-30310460 | MS.gene073976:CDS |
ATGTTGATAATGATAATGAG+AGG | 0.609132 | 2.1:-30310277 | MS.gene073976:CDS |
GACTCGTCAAAAGGAGATGG+TGG | 0.611157 | 2.1:-30311774 | MS.gene073976:CDS |
ATATCAACTTCATCTGAGAG+TGG | 0.614980 | 2.1:-30312418 | MS.gene073976:CDS |
AGCCACTTAAAGTCTGAAGT+AGG | 0.617789 | 2.1:+30310722 | None:intergenic |
TGTTGATAATGATAATGAGA+GGG | 0.618346 | 2.1:-30310276 | MS.gene073976:CDS |
AGAACTGGACTGTCACATGT+TGG | 0.620791 | 2.1:+30312118 | None:intergenic |
GTGATGGGTGAAGGTGTTGG+AGG | 0.621481 | 2.1:-30311848 | MS.gene073976:CDS |
TGAAAATTCAGTTATTGACG+TGG | 0.624344 | 2.1:-30312383 | MS.gene073976:CDS |
ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 2.1:+30310208 | None:intergenic |
GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 2.1:-30310887 | MS.gene073976:CDS |
CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 2.1:-30310537 | MS.gene073976:CDS |
ATGTCTATAAGATATATAGG+TGG | 0.643489 | 2.1:-30312009 | MS.gene073976:CDS |
GCATCTAAAATATTTCTCAA+CGG | 0.643711 | 2.1:-30309861 | MS.gene073976:CDS |
GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 2.1:+30309987 | None:intergenic |
AGAGCATCTTATGAAGTGAT+GGG | 0.649560 | 2.1:-30311863 | MS.gene073976:CDS |
TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 2.1:+30310416 | None:intergenic |
CATGTCGACATAAGAAACCC+CGG | 0.663279 | 2.1:+30310111 | None:intergenic |
TCTTATGAAGTGATGGGTGA+AGG | 0.670441 | 2.1:-30311857 | MS.gene073976:CDS |
TCAAACCATATACACAGACC+AGG | 0.671057 | 2.1:-30310960 | MS.gene073976:CDS |
TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 2.1:-30310128 | MS.gene073976:CDS |
GTCAATTCTGATGTAATGCG+CGG | 0.734639 | 2.1:-30309197 | MS.gene073976:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ACGTATTTATTATTATATTT+TGG | - | chr2.1:30312191-30312210 | MS.gene073976:CDS | 10.0% |
!!! | TGTTTTTTATGTTATAAGTT+AGG | - | chr2.1:30312020-30312039 | MS.gene073976:CDS | 15.0% |
!! | AAACCAAATTAACAATCTAA+TGG | + | chr2.1:30312224-30312243 | None:intergenic | 20.0% |
!! | AAACCATAATTATGGTTTAA+TGG | + | chr2.1:30312267-30312286 | None:intergenic | 20.0% |
!! | AAACCATTAAACCATAATTA+TGG | - | chr2.1:30312261-30312280 | MS.gene073976:CDS | 20.0% |
!! | AAACCATTAGATTGTTAATT+TGG | - | chr2.1:30312218-30312237 | MS.gene073976:CDS | 20.0% |
!! | AATTCTTGATTGTTATGTAT+TGG | - | chr2.1:30312118-30312137 | MS.gene073976:CDS | 20.0% |
!! | CAATTCACAAAATAAGAAAT+CGG | - | chr2.1:30309360-30309379 | MS.gene073976:intron | 20.0% |
!! | TCTTAACTAAACCATAATTA+TGG | + | chr2.1:30312275-30312294 | None:intergenic | 20.0% |
!! | TGAATGTCTATAAGATATAT+AGG | - | chr2.1:30309566-30309585 | MS.gene073976:intron | 20.0% |
!! | TTTAATTATGCATATAACAC+TGG | - | chr2.1:30309304-30309323 | MS.gene073976:intron | 20.0% |
!!! | AATTTAATGTTCTGGTTTAT+TGG | - | chr2.1:30310187-30310206 | MS.gene073976:CDS | 20.0% |
!!! | ATGATGAAAAACTGTTTTAA+TGG | - | chr2.1:30310829-30310848 | MS.gene073976:CDS | 20.0% |
!!! | TGAATGTTTATATTGATTGA+AGG | - | chr2.1:30310159-30310178 | MS.gene073976:CDS | 20.0% |
! | AAAACACCTTGAAAAACATT+CGG | + | chr2.1:30310667-30310686 | None:intergenic | 25.0% |
! | AAAGTGATTATGAAAAAGCT+AGG | - | chr2.1:30311919-30311938 | MS.gene073976:intron | 25.0% |
! | AAGTGATTATGAAAAAGCTA+GGG | - | chr2.1:30311920-30311939 | MS.gene073976:intron | 25.0% |
! | AATCAGATTTCAACTACAAT+TGG | - | chr2.1:30310800-30310819 | MS.gene073976:CDS | 25.0% |
! | ACAAAATAAGAAATCGGATA+AGG | - | chr2.1:30309366-30309385 | MS.gene073976:intron | 25.0% |
! | ACCGAACAAACAATAAATAT+CGG | - | chr2.1:30310004-30310023 | MS.gene073976:CDS | 25.0% |
! | AGTACAAAATACTAACCTAA+TGG | + | chr2.1:30310030-30310049 | None:intergenic | 25.0% |
! | ATCAGATTTCAACTACAATT+GGG | - | chr2.1:30310801-30310820 | MS.gene073976:CDS | 25.0% |
! | ATGTCTATAAGATATATAGG+TGG | - | chr2.1:30309569-30309588 | MS.gene073976:intron | 25.0% |
! | ATGTTATAAGTTAGGAAAGA+TGG | - | chr2.1:30312028-30312047 | MS.gene073976:CDS | 25.0% |
! | CAAAATAGTATTTGAAGGAA+AGG | + | chr2.1:30311200-30311219 | None:intergenic | 25.0% |
! | CTTTAGTCATTTCAACATTA+TGG | - | chr2.1:30311026-30311045 | MS.gene073976:CDS | 25.0% |
! | TGAAATTTGAATGAATGTTC+TGG | - | chr2.1:30310077-30310096 | MS.gene073976:CDS | 25.0% |
! | TGAATAAATGAAAAGCAAGA+TGG | + | chr2.1:30311165-30311184 | None:intergenic | 25.0% |
! | TGTCTATAAGATATATAGGT+GGG | - | chr2.1:30309570-30309589 | MS.gene073976:intron | 25.0% |
! | TTTCGATGAGTTAACTAATT+TGG | - | chr2.1:30310759-30310778 | MS.gene073976:CDS | 25.0% |
!! | AGGTTTAGAATTTAATGTTC+TGG | - | chr2.1:30310179-30310198 | MS.gene073976:CDS | 25.0% |
!! | ATTTTCAATTCTGAGTTAAG+TGG | - | chr2.1:30312294-30312313 | MS.gene073976:CDS | 25.0% |
!! | CAAAGTTTTTACAATTGAGA+AGG | - | chr2.1:30311260-30311279 | MS.gene073976:intron | 25.0% |
!! | CTATACATTTTCACATTTGT+TGG | - | chr2.1:30312163-30312182 | MS.gene073976:CDS | 25.0% |
!! | GCATCTAAAATATTTCTCAA+CGG | - | chr2.1:30311717-30311736 | MS.gene073976:CDS | 25.0% |
!! | TGTTGTATTTTGTTCTGATT+TGG | - | chr2.1:30310449-30310468 | MS.gene073976:CDS | 25.0% |
!! | TTCCTTCAAATACTATTTTG+AGG | - | chr2.1:30311200-30311219 | MS.gene073976:intron | 25.0% |
!! | TTGGTTTGAATATTATCTTC+TGG | - | chr2.1:30312137-30312156 | MS.gene073976:CDS | 25.0% |
!!! | AAGACATAGCTAGTATTTTT+TGG | - | chr2.1:30309917-30309936 | MS.gene073976:CDS | 25.0% |
!!! | AGACATAGCTAGTATTTTTT+GGG | - | chr2.1:30309918-30309937 | MS.gene073976:CDS | 25.0% |
!!! | ATGTTGATAATGATAATGAG+AGG | - | chr2.1:30311301-30311320 | MS.gene073976:intron | 25.0% |
!!! | CTTATTTTGTGAATTGTTCT+TGG | + | chr2.1:30309356-30309375 | None:intergenic | 25.0% |
!!! | GCTTTAATAAATTCTAAAGC+TGG | - | chr2.1:30309682-30309701 | MS.gene073976:intron | 25.0% |
!!! | TGAAAAACTGTTTTAATGGA+AGG | - | chr2.1:30310833-30310852 | MS.gene073976:CDS | 25.0% |
!!! | TGTTGATAATGATAATGAGA+GGG | - | chr2.1:30311302-30311321 | MS.gene073976:intron | 25.0% |
AAACACATATGATCTTTCCA+TGG | + | chr2.1:30310250-30310269 | None:intergenic | 30.0% | |
AAATGCTCTGCTTTATGTAA+TGG | + | chr2.1:30309613-30309632 | None:intergenic | 30.0% | |
AACAAAGAAGGTTTCAAGAA+GGG | - | chr2.1:30309412-30309431 | MS.gene073976:intron | 30.0% | |
AACAATAAATATCGGCCATT+AGG | - | chr2.1:30310012-30310031 | MS.gene073976:CDS | 30.0% | |
AAGAAAGACCAAATCCAATT+AGG | - | chr2.1:30311880-30311899 | MS.gene073976:CDS | 30.0% | |
ATGATTGTCAAAACCAAGAA+AGG | + | chr2.1:30310494-30310513 | None:intergenic | 30.0% | |
ATTATGATCTTCAAACCTTG+GGG | + | chr2.1:30311373-30311392 | None:intergenic | 30.0% | |
CAACAAGATTATGCTCTATT+TGG | - | chr2.1:30309955-30309974 | MS.gene073976:CDS | 30.0% | |
CACAAATTCTAAGTCAAGAT+AGG | + | chr2.1:30310217-30310236 | None:intergenic | 30.0% | |
CCATGATTCTTTATCACTAA+AGG | + | chr2.1:30309239-30309258 | None:intergenic | 30.0% | |
CCTTTAGTGATAAAGAATCA+TGG | - | chr2.1:30309236-30309255 | MS.gene073976:intron | 30.0% | |
CTCCTCAAAATAGTATTTGA+AGG | + | chr2.1:30311205-30311224 | None:intergenic | 30.0% | |
CTGGTATATGTGTGTTAATT+TGG | - | chr2.1:30310116-30310135 | MS.gene073976:CDS | 30.0% | |
GAGAATGCAAAGAAAAATCT+CGG | - | chr2.1:30310715-30310734 | MS.gene073976:CDS | 30.0% | |
GATTATGATCTTCAAACCTT+GGG | + | chr2.1:30311374-30311393 | None:intergenic | 30.0% | |
GCCGATATTTATTGTTTGTT+CGG | + | chr2.1:30310008-30310027 | None:intergenic | 30.0% | |
TAAAGAAAAACCAGAGGAAA+GGG | - | chr2.1:30309501-30309520 | MS.gene073976:intron | 30.0% | |
TAAAGAATCATGGAAGTCTT+TGG | - | chr2.1:30309246-30309265 | MS.gene073976:intron | 30.0% | |
TAAAGAATCGAACAAGTGAA+TGG | + | chr2.1:30311011-30311030 | None:intergenic | 30.0% | |
TAACAAAGAAGGTTTCAAGA+AGG | - | chr2.1:30309411-30309430 | MS.gene073976:intron | 30.0% | |
TGAAAATTCAGTTATTGACG+TGG | - | chr2.1:30309195-30309214 | MS.gene073976:CDS | 30.0% | |
TGAGAAGTAAATGAAGTTCA+AGG | - | chr2.1:30309652-30309671 | MS.gene073976:intron | 30.0% | |
TGGATATCATAGTAAAAACC+TGG | + | chr2.1:30309883-30309902 | None:intergenic | 30.0% | |
TGGTGTATACTTGTTTACTA+CGG | + | chr2.1:30311145-30311164 | None:intergenic | 30.0% | |
TTCTTTGACCTAATTGGATT+TGG | + | chr2.1:30311891-30311910 | None:intergenic | 30.0% | |
TTTAAGTCCGAAAATCGAAA+AGG | + | chr2.1:30309769-30309788 | None:intergenic | 30.0% | |
TTTCTATTTACACAGCTCAA+TGG | - | chr2.1:30310408-30310427 | MS.gene073976:CDS | 30.0% | |
! | AGCTGGAATATATTTGAAGT+TGG | - | chr2.1:30309534-30309553 | MS.gene073976:intron | 30.0% |
! | GAATCTTCCTTTTCGATTTT+CGG | - | chr2.1:30309759-30309778 | MS.gene073976:CDS | 30.0% |
! | GGTTTCAAATGTTGATGTTT+TGG | - | chr2.1:30311323-30311342 | MS.gene073976:intron | 30.0% |
! | TATGGTTTGAGGTTTCTTAT+TGG | + | chr2.1:30310608-30310627 | None:intergenic | 30.0% |
! | TCAATTCCGAATGTTTTTCA+AGG | - | chr2.1:30310658-30310677 | MS.gene073976:CDS | 30.0% |
! | TGAGGCTTTAACAATTTAAG+CGG | - | chr2.1:30311989-30312008 | MS.gene073976:intron | 30.0% |
! | TGAGGCTTTAACTAAAAAAG+CGG | - | chr2.1:30312051-30312070 | MS.gene073976:CDS | 30.0% |
! | TTTGGTCTTTCTTTGAACTT+TGG | + | chr2.1:30311873-30311892 | None:intergenic | 30.0% |
!! | ATCATAATCGACTTGATGAA+AGG | - | chr2.1:30311385-30311404 | MS.gene073976:intron | 30.0% |
!! | ATGTTCTGGTTTAGAATTGA+AGG | - | chr2.1:30310091-30310110 | MS.gene073976:CDS | 30.0% |
!! | CTTCAAATACTATTTTGAGG+AGG | - | chr2.1:30311203-30311222 | MS.gene073976:intron | 30.0% |
!! | GAGGAGTTTCTTATTTCTAA+AGG | - | chr2.1:30311765-30311784 | MS.gene073976:CDS | 30.0% |
!! | TCATAATCGACTTGATGAAA+GGG | - | chr2.1:30311386-30311405 | MS.gene073976:intron | 30.0% |
!! | TCGACATGTTTTCAAGATTT+TGG | - | chr2.1:30311482-30311501 | MS.gene073976:intron | 30.0% |
!!! | CTGCACAATATGTTTTAAAG+CGG | - | chr2.1:30311550-30311569 | MS.gene073976:intron | 30.0% |
!!! | GTTTTTCAAGGTGTTTTTCA+TGG | - | chr2.1:30310670-30310689 | MS.gene073976:CDS | 30.0% |
!!! | TTCAAGATTTTGGAGTTCTT+AGG | - | chr2.1:30311492-30311511 | MS.gene073976:intron | 30.0% |
ACATTATGGTTCAGAGAATG+AGG | - | chr2.1:30311040-30311059 | MS.gene073976:CDS | 35.0% | |
ACTAAAAAAGCGGTCACTTA+TGG | - | chr2.1:30312061-30312080 | MS.gene073976:CDS | 35.0% | |
ATAACACTGGATTCTCTGTT+AGG | - | chr2.1:30309317-30309336 | MS.gene073976:intron | 35.0% | |
ATAAGTTAGGAAAGATGGTG+AGG | - | chr2.1:30312033-30312052 | MS.gene073976:CDS | 35.0% | |
ATATCAACTTCATCTGAGAG+TGG | - | chr2.1:30309160-30309179 | MS.gene073976:CDS | 35.0% | |
CATTATGGTTCAGAGAATGA+GGG | - | chr2.1:30311041-30311060 | MS.gene073976:CDS | 35.0% | |
CGATTATGATCTTCAAACCT+TGG | + | chr2.1:30311375-30311394 | None:intergenic | 35.0% | |
CGTTATGCTTGTAACAAAGA+AGG | - | chr2.1:30309400-30309419 | MS.gene073976:intron | 35.0% | |
CTAAAGAAAAACCAGAGGAA+AGG | - | chr2.1:30309500-30309519 | MS.gene073976:intron | 35.0% | |
CTCATTCAAATCGTATGCAT+TGG | - | chr2.1:30310887-30310906 | MS.gene073976:CDS | 35.0% | |
CTGAAATCTACCATGAATGT+TGG | - | chr2.1:30311606-30311625 | MS.gene073976:CDS | 35.0% | |
GAAAGCTAAAGAAAAACCAG+AGG | - | chr2.1:30309495-30309514 | MS.gene073976:intron | 35.0% | |
GAAGCAAAAGAAAGATGATG+AGG | - | chr2.1:30311971-30311990 | MS.gene073976:intron | 35.0% | |
GACAGAAATTCCTTATAGCT+CGG | - | chr2.1:30311946-30311965 | MS.gene073976:intron | 35.0% | |
GTCTGCTTAATCCTAAAAAC+AGG | - | chr2.1:30309437-30309456 | MS.gene073976:intron | 35.0% | |
TTCTCATACTCAACAAGAAC+TGG | + | chr2.1:30309478-30309497 | None:intergenic | 35.0% | |
! | AGAGCATCTTATGAAGTGAT+GGG | - | chr2.1:30309715-30309734 | MS.gene073976:intron | 35.0% |
! | CATCGTAAGAGTGTGTTATT+TGG | - | chr2.1:30310511-30310530 | MS.gene073976:CDS | 35.0% |
! | GAGGCTTTAACAATTTAAGC+GGG | - | chr2.1:30311990-30312009 | MS.gene073976:intron | 35.0% |
! | TCTTTCAATGCTTTTCTTCG+TGG | - | chr2.1:30310970-30310989 | MS.gene073976:CDS | 35.0% |
! | TTTTTCATGGTCTTTGCTCA+TGG | - | chr2.1:30310683-30310702 | MS.gene073976:CDS | 35.0% |
!! | ACTGCTTTTGAAGACTTAGA+AGG | + | chr2.1:30311819-30311838 | None:intergenic | 35.0% |
!! | CGCTTTAAAACATATTGTGC+AGG | + | chr2.1:30311552-30311571 | None:intergenic | 35.0% |
!! | TATGCATTGGTCTTCAGTTT+GGG | - | chr2.1:30310900-30310919 | MS.gene073976:CDS | 35.0% |
!!! | AAGATTTTGGAGTTCTTAGG+TGG | - | chr2.1:30311495-30311514 | MS.gene073976:intron | 35.0% |
!!! | AGACATCAGCTACTTTTGAT+TGG | - | chr2.1:30310554-30310573 | MS.gene073976:CDS | 35.0% |
!!! | CACAATATGTTTTAAAGCGG+TGG | - | chr2.1:30311553-30311572 | MS.gene073976:intron | 35.0% |
AATCGAACAAGTGAATGGTC+TGG | + | chr2.1:30311006-30311025 | None:intergenic | 40.0% | |
ACCTATGATCTTTGCATAGC+TGG | + | chr2.1:30310348-30310367 | None:intergenic | 40.0% | |
AGTCGCTTCTTTGACCTAAT+TGG | + | chr2.1:30311897-30311916 | None:intergenic | 40.0% | |
ATCTGAGAGTGGACAATTGA+CGG | - | chr2.1:30309171-30309190 | MS.gene073976:CDS | 40.0% | |
ATGTCGTATGTTTGAGAACC+GGG | - | chr2.1:30311449-30311468 | MS.gene073976:intron | 40.0% | |
ATTTCTCAACGGTGTTCTTG+AGG | - | chr2.1:30311728-30311747 | MS.gene073976:CDS | 40.0% | |
CATGTCGTATGTTTGAGAAC+CGG | - | chr2.1:30311448-30311467 | MS.gene073976:intron | 40.0% | |
GATTTCAGCTTATCGACAGA+CGG | + | chr2.1:30311594-30311613 | None:intergenic | 40.0% | |
GTCAATTCTGATGTAATGCG+CGG | - | chr2.1:30312381-30312400 | MS.gene073976:CDS | 40.0% | |
GTCTTTAGTGCCAACATTCA+TGG | + | chr2.1:30311619-30311638 | None:intergenic | 40.0% | |
TACATTTCAGCTGCCTTTCT+TGG | - | chr2.1:30310478-30310497 | MS.gene073976:CDS | 40.0% | |
TCAAACCATATACACAGACC+AGG | - | chr2.1:30310618-30310637 | MS.gene073976:CDS | 40.0% | |
TCCAGCTATGCAAAGATCAT+AGG | - | chr2.1:30310344-30310363 | MS.gene073976:CDS | 40.0% | |
TCTAATGACGACTCGTCAAA+AGG | - | chr2.1:30309795-30309814 | MS.gene073976:CDS | 40.0% | |
TGGTCTGTGTATATGGTTTG+AGG | + | chr2.1:30310619-30310638 | None:intergenic | 40.0% | |
TTGAGGAGGACACAACAAAA+GGG | - | chr2.1:30311217-30311236 | MS.gene073976:intron | 40.0% | |
TTTGAGGAGGACACAACAAA+AGG | - | chr2.1:30311216-30311235 | MS.gene073976:intron | 40.0% | |
TTTGCTTCTTCCGAGCTATA+AGG | + | chr2.1:30311959-30311978 | None:intergenic | 40.0% | |
! | AGCCACTTAAAGTCTGAAGT+AGG | + | chr2.1:30310859-30310878 | None:intergenic | 40.0% |
! | GAGGGATAATCATGCTGATT+TGG | - | chr2.1:30311059-30311078 | MS.gene073976:CDS | 40.0% |
! | TGAAGACTTAGAAGGCGTAA+CGG | + | chr2.1:30311811-30311830 | None:intergenic | 40.0% |
! | TGGTTTAGAATTGAAGGCTC+TGG | - | chr2.1:30310097-30310116 | MS.gene073976:CDS | 40.0% |
!! | GAGAGCATCTTATGAAGTGA+TGG | - | chr2.1:30309714-30309733 | MS.gene073976:intron | 40.0% |
!! | GTATGCATTGGTCTTCAGTT+TGG | - | chr2.1:30310899-30310918 | MS.gene073976:CDS | 40.0% |
!! | GTTTTGGATGCAGAACTTGA+AGG | - | chr2.1:30311339-30311358 | MS.gene073976:intron | 40.0% |
!! | TCACATGTTGGCCTGTTTTT+AGG | + | chr2.1:30309451-30309470 | None:intergenic | 40.0% |
!! | TCATGCTGATTTGGACTTCA+AGG | - | chr2.1:30311068-30311087 | MS.gene073976:CDS | 40.0% |
!! | TCTTATGAAGTGATGGGTGA+AGG | - | chr2.1:30309721-30309740 | MS.gene073976:intron | 40.0% |
!!! | GCTAGTATTTTTTGGGCAGA+TGG | - | chr2.1:30309925-30309944 | MS.gene073976:CDS | 40.0% |
AATGAAGCTCTCTCGAAACC+AGG | - | chr2.1:30309862-30309881 | MS.gene073976:CDS | 45.0% | |
AGAACTGGACTGTCACATGT+TGG | + | chr2.1:30309463-30309482 | None:intergenic | 45.0% | |
ATCCCAACAGTCAGCTTATG+CGG | - | chr2.1:30311118-30311137 | MS.gene073976:intron | 45.0% | |
ATTTGTGCTCTGTACAGCCA+TGG | - | chr2.1:30310230-30310249 | MS.gene073976:CDS | 45.0% | |
CATGTCGACATAAGAAACCC+CGG | + | chr2.1:30311470-30311489 | None:intergenic | 45.0% | |
GAAAAACCAGAGGAAAGGGT+TGG | - | chr2.1:30309505-30309524 | MS.gene073976:intron | 45.0% | |
GATCTTCAAACCTTGGGGAA+AGG | + | chr2.1:30311368-30311387 | None:intergenic | 45.0% | |
GGCCTACTTCAGACTTTAAG+TGG | - | chr2.1:30310854-30310873 | MS.gene073976:CDS | 45.0% | |
TGTCGTATGTTTGAGAACCG+GGG | - | chr2.1:30311450-30311469 | MS.gene073976:intron | 45.0% | |
TGTCTTCTGCAGCATCAACT+TGG | + | chr2.1:30309903-30309922 | None:intergenic | 45.0% | |
TGTTCTTGAGGCAGGGAAAA+AGG | - | chr2.1:30311740-30311759 | MS.gene073976:CDS | 45.0% | |
TTACAACCAACCCTTTCCTC+TGG | + | chr2.1:30309514-30309533 | None:intergenic | 45.0% | |
TTGAAGGAAACCTTTCCCCA+AGG | - | chr2.1:30311355-30311374 | MS.gene073976:intron | 45.0% | |
! | GTGAGGTCACATTTTACAGC+TGG | - | chr2.1:30310922-30310941 | MS.gene073976:intron | 45.0% |
!! | ATTGGTCTTCAGTTTGGGTG+AGG | - | chr2.1:30310905-30310924 | MS.gene073976:intron | 45.0% |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | - | chr2.1:30309517-30309536 | MS.gene073976:intron | 45.0% |
ACCAGCCTGGTCTGTGTATA+TGG | + | chr2.1:30310626-30310645 | None:intergenic | 50.0% | |
ACCATATACACAGACCAGGC+TGG | - | chr2.1:30310622-30310641 | MS.gene073976:CDS | 50.0% | |
CGCAAACACGTGTAGAAAGC+TGG | + | chr2.1:30311686-30311705 | None:intergenic | 50.0% | |
CTGTCTGTGAGCCATCTGTT+GGG | - | chr2.1:30311841-30311860 | MS.gene073976:CDS | 50.0% | |
GACCGCATAAGCTGACTGTT+GGG | + | chr2.1:30311123-30311142 | None:intergenic | 50.0% | |
GACGACTCGTCAAAAGGAGA+TGG | - | chr2.1:30309801-30309820 | MS.gene073976:CDS | 50.0% | |
GACTCGTCAAAAGGAGATGG+TGG | - | chr2.1:30309804-30309823 | MS.gene073976:CDS | 50.0% | |
GGGTTGTCACAGTCGACATT+AGG | - | chr2.1:30311406-30311425 | MS.gene073976:intron | 50.0% | |
GGTCTTTGCTCATGGCACAT+GGG | - | chr2.1:30310691-30310710 | MS.gene073976:CDS | 50.0% | |
TACACGTGTTTGCGCAGATG+CGG | - | chr2.1:30311692-30311711 | MS.gene073976:CDS | 50.0% | |
TCAACGGTGTTCTTGAGGCA+GGG | - | chr2.1:30311733-30311752 | MS.gene073976:CDS | 50.0% | |
TGGTCTTTGCTCATGGCACA+TGG | - | chr2.1:30310690-30310709 | MS.gene073976:CDS | 50.0% | |
! | TTTGGTGCAGTCCCAACAGA+TGG | + | chr2.1:30311855-30311874 | None:intergenic | 50.0% |
!! | GAAGTGATGGGTGAAGGTGT+TGG | - | chr2.1:30309727-30309746 | MS.gene073976:intron | 50.0% |
ACTTCAACAACGCACCAGCC+TGG | + | chr2.1:30310639-30310658 | None:intergenic | 55.0% | |
CTCAACGGTGTTCTTGAGGC+AGG | - | chr2.1:30311732-30311751 | MS.gene073976:CDS | 55.0% | |
GCTGTCTGTGAGCCATCTGT+TGG | - | chr2.1:30311840-30311859 | MS.gene073976:CDS | 55.0% | |
GGACCGCATAAGCTGACTGT+TGG | + | chr2.1:30311124-30311143 | None:intergenic | 55.0% | |
TGAGGCAGGGAAAAAGGCAG+AGG | - | chr2.1:30311746-30311765 | MS.gene073976:CDS | 55.0% | |
! | CGTCAAAAGGAGATGGTGGC+TGG | - | chr2.1:30309808-30309827 | MS.gene073976:CDS | 55.0% |
!! | GTGATGGGTGAAGGTGTTGG+AGG | - | chr2.1:30309730-30309749 | MS.gene073976:intron | 55.0% |
ACGTGTTTGCGCAGATGCGG+AGG | - | chr2.1:30311695-30311714 | MS.gene073976:CDS | 60.0% | |
!! | GGGTGAAGGTGTTGGAGGCA+CGG | - | chr2.1:30309735-30309754 | MS.gene073976:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 30309151 | 30312449 | 30309151 | ID=MS.gene073976 |
chr2.1 | mRNA | 30309151 | 30312449 | 30309151 | ID=MS.gene073976.t1;Parent=MS.gene073976 |
chr2.1 | exon | 30311996 | 30312449 | 30311996 | ID=MS.gene073976.t1.exon1;Parent=MS.gene073976.t1 |
chr2.1 | CDS | 30311996 | 30312449 | 30311996 | ID=cds.MS.gene073976.t1;Parent=MS.gene073976.t1 |
chr2.1 | exon | 30311567 | 30311899 | 30311567 | ID=MS.gene073976.t1.exon2;Parent=MS.gene073976.t1 |
chr2.1 | CDS | 30311567 | 30311899 | 30311567 | ID=cds.MS.gene073976.t1;Parent=MS.gene073976.t1 |
chr2.1 | exon | 30310957 | 30311112 | 30310957 | ID=MS.gene073976.t1.exon3;Parent=MS.gene073976.t1 |
chr2.1 | CDS | 30310957 | 30311112 | 30310957 | ID=cds.MS.gene073976.t1;Parent=MS.gene073976.t1 |
chr2.1 | exon | 30309754 | 30310920 | 30309754 | ID=MS.gene073976.t1.exon4;Parent=MS.gene073976.t1 |
chr2.1 | CDS | 30309754 | 30310920 | 30309754 | ID=cds.MS.gene073976.t1;Parent=MS.gene073976.t1 |
chr2.1 | exon | 30309151 | 30309242 | 30309151 | ID=MS.gene073976.t1.exon5;Parent=MS.gene073976.t1 |
chr2.1 | CDS | 30309151 | 30309242 | 30309151 | ID=cds.MS.gene073976.t1;Parent=MS.gene073976.t1 |
Gene Sequence |
Protein sequence |