Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074138.t1 | XP_024632961.1 | 87 | 718 | 81 | 3 | 2 | 707 | 92 | 809 | 0.00E+00 | 1263.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074138.t1 | Q9SZL8 | 25.7 | 728 | 456 | 16 | 10 | 718 | 118 | 779 | 6.5e-54 | 213.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074138.t1 | D3YBB9 | 79.5 | 699 | 123 | 4 | 2 | 690 | 124 | 812 | 0.0e+00 | 1125.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene074138.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074138.t1 | MTR_0558s0020 | 87.727 | 220 | 27 | 0 | 2 | 221 | 77 | 296 | 4.95e-143 | 421 |
MS.gene074138.t1 | MTR_6g090505 | 83.628 | 226 | 37 | 0 | 2 | 227 | 12 | 237 | 5.42e-135 | 402 |
MS.gene074138.t1 | MTR_6g090505 | 66.667 | 102 | 7 | 2 | 322 | 421 | 230 | 306 | 2.39e-33 | 132 |
MS.gene074138.t1 | MTR_6g090505 | 77.551 | 49 | 11 | 0 | 493 | 541 | 314 | 362 | 2.26e-11 | 66.6 |
MS.gene074138.t1 | MTR_8g446020 | 85.854 | 205 | 29 | 0 | 17 | 221 | 52 | 256 | 7.76e-129 | 382 |
MS.gene074138.t1 | MTR_1g083640 | 88.601 | 193 | 22 | 0 | 2 | 194 | 92 | 284 | 3.74e-126 | 377 |
MS.gene074138.t1 | MTR_0337s0060 | 57.911 | 316 | 33 | 4 | 373 | 685 | 21 | 239 | 2.37e-107 | 327 |
MS.gene074138.t1 | MTR_0337s0040 | 84.118 | 170 | 27 | 0 | 17 | 186 | 53 | 222 | 1.42e-101 | 311 |
MS.gene074138.t1 | MTR_3g028680 | 80.978 | 184 | 32 | 1 | 544 | 724 | 1 | 184 | 3.42e-100 | 306 |
MS.gene074138.t1 | MTR_2g014100 | 84.472 | 161 | 25 | 0 | 2 | 162 | 85 | 245 | 5.85e-98 | 303 |
MS.gene074138.t1 | MTR_2g067090 | 79.558 | 181 | 34 | 1 | 547 | 724 | 99 | 279 | 9.13e-92 | 288 |
MS.gene074138.t1 | MTR_1g055240 | 85.211 | 142 | 21 | 0 | 17 | 158 | 3 | 144 | 6.60e-84 | 262 |
MS.gene074138.t1 | MTR_0019s0290 | 80.263 | 152 | 30 | 0 | 8 | 159 | 9 | 160 | 2.35e-83 | 261 |
MS.gene074138.t1 | MTR_3g008240 | 82.677 | 127 | 22 | 0 | 2 | 128 | 77 | 203 | 1.73e-70 | 229 |
MS.gene074138.t1 | MTR_4g133495 | 63.536 | 181 | 40 | 2 | 502 | 679 | 88 | 245 | 6.05e-68 | 225 |
MS.gene074138.t1 | MTR_4g133340 | 63.536 | 181 | 40 | 2 | 502 | 679 | 88 | 245 | 6.05e-68 | 225 |
MS.gene074138.t1 | MTR_4g040430 | 81.102 | 127 | 20 | 1 | 2 | 128 | 76 | 198 | 7.57e-68 | 222 |
MS.gene074138.t1 | MTR_5g071590 | 77.174 | 92 | 21 | 0 | 2 | 93 | 89 | 180 | 2.51e-47 | 166 |
MS.gene074138.t1 | MTR_6g051425 | 33.333 | 273 | 154 | 5 | 11 | 267 | 64 | 324 | 3.69e-37 | 142 |
MS.gene074138.t1 | MTR_2g067130 | 67.290 | 107 | 29 | 2 | 621 | 724 | 46 | 149 | 5.98e-37 | 136 |
MS.gene074138.t1 | MTR_1281s0010 | 76.923 | 52 | 12 | 0 | 2 | 53 | 58 | 109 | 1.85e-22 | 93.2 |
MS.gene074138.t1 | MTR_1g070355 | 25.000 | 292 | 201 | 5 | 1 | 288 | 107 | 384 | 4.87e-16 | 82.4 |
MS.gene074138.t1 | MTR_0337s0050 | 75.000 | 36 | 9 | 0 | 185 | 220 | 14 | 49 | 1.19e-13 | 67.0 |
MS.gene074138.t1 | MTR_0402s0040 | 26.667 | 150 | 95 | 3 | 10 | 159 | 71 | 205 | 1.05e-12 | 71.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074138.t1 | AT4G38180 | 26.370 | 584 | 364 | 11 | 10 | 591 | 118 | 637 | 3.54e-64 | 228 |
MS.gene074138.t1 | AT4G15090 | 25.080 | 622 | 399 | 11 | 49 | 667 | 121 | 678 | 7.37e-57 | 208 |
MS.gene074138.t1 | AT4G15090 | 25.080 | 622 | 399 | 11 | 49 | 667 | 121 | 678 | 7.37e-57 | 208 |
MS.gene074138.t1 | AT4G15090 | 25.080 | 622 | 399 | 11 | 49 | 667 | 121 | 678 | 7.37e-57 | 208 |
MS.gene074138.t1 | AT4G15090 | 25.080 | 622 | 399 | 11 | 49 | 667 | 121 | 678 | 7.37e-57 | 208 |
MS.gene074138.t1 | AT4G15090 | 25.080 | 622 | 399 | 11 | 49 | 667 | 121 | 678 | 7.37e-57 | 208 |
MS.gene074138.t1 | AT2G27110 | 25.461 | 597 | 371 | 15 | 53 | 645 | 108 | 634 | 1.23e-49 | 187 |
MS.gene074138.t1 | AT2G27110 | 25.461 | 597 | 371 | 15 | 53 | 645 | 108 | 634 | 1.23e-49 | 187 |
MS.gene074138.t1 | AT2G27110 | 26.523 | 509 | 317 | 11 | 139 | 645 | 36 | 489 | 2.25e-49 | 185 |
MS.gene074138.t1 | AT1G76320 | 24.845 | 644 | 392 | 18 | 9 | 646 | 41 | 598 | 8.04e-47 | 177 |
MS.gene074138.t1 | AT1G76320 | 24.299 | 642 | 398 | 16 | 9 | 646 | 41 | 598 | 1.42e-46 | 177 |
MS.gene074138.t1 | AT1G76320 | 24.845 | 644 | 392 | 18 | 9 | 646 | 41 | 598 | 1.70e-46 | 177 |
MS.gene074138.t1 | AT1G76320 | 24.845 | 644 | 392 | 18 | 9 | 646 | 41 | 598 | 1.70e-46 | 177 |
MS.gene074138.t1 | AT3G06250 | 24.014 | 583 | 324 | 14 | 10 | 587 | 235 | 703 | 3.14e-45 | 173 |
MS.gene074138.t1 | AT3G06250 | 24.014 | 583 | 324 | 14 | 10 | 587 | 235 | 703 | 3.14e-45 | 173 |
MS.gene074138.t1 | AT3G06250 | 24.014 | 583 | 324 | 14 | 10 | 587 | 235 | 703 | 3.14e-45 | 173 |
MS.gene074138.t1 | AT3G22170 | 22.714 | 678 | 417 | 16 | 9 | 679 | 114 | 691 | 1.32e-43 | 169 |
MS.gene074138.t1 | AT3G22170 | 22.714 | 678 | 417 | 16 | 9 | 679 | 114 | 691 | 1.32e-43 | 169 |
MS.gene074138.t1 | AT4G38170 | 25.522 | 431 | 263 | 12 | 161 | 588 | 24 | 399 | 5.43e-41 | 158 |
MS.gene074138.t1 | AT5G18960 | 24.444 | 585 | 322 | 17 | 10 | 587 | 256 | 727 | 8.88e-40 | 157 |
MS.gene074138.t1 | AT5G18960 | 24.444 | 585 | 322 | 17 | 10 | 587 | 256 | 727 | 8.88e-40 | 157 |
MS.gene074138.t1 | AT1G10240 | 25.933 | 563 | 333 | 19 | 39 | 585 | 110 | 604 | 2.50e-38 | 152 |
MS.gene074138.t1 | AT1G10240 | 25.933 | 563 | 333 | 19 | 39 | 585 | 110 | 604 | 2.50e-38 | 152 |
MS.gene074138.t1 | AT5G28530 | 24.212 | 603 | 347 | 20 | 11 | 586 | 100 | 619 | 3.73e-36 | 145 |
MS.gene074138.t1 | AT5G28530 | 24.247 | 598 | 349 | 19 | 11 | 586 | 100 | 615 | 5.14e-36 | 145 |
MS.gene074138.t1 | AT5G28530 | 24.247 | 598 | 349 | 19 | 11 | 586 | 100 | 615 | 5.14e-36 | 145 |
MS.gene074138.t1 | AT2G32250 | 23.214 | 672 | 382 | 20 | 2 | 666 | 75 | 619 | 9.78e-35 | 142 |
MS.gene074138.t1 | AT2G32250 | 23.065 | 672 | 383 | 19 | 2 | 666 | 34 | 578 | 1.55e-34 | 141 |
MS.gene074138.t1 | AT2G32250 | 23.214 | 672 | 382 | 20 | 2 | 666 | 75 | 619 | 1.56e-34 | 141 |
MS.gene074138.t1 | AT2G32250 | 23.214 | 672 | 382 | 20 | 2 | 666 | 75 | 619 | 1.56e-34 | 141 |
MS.gene074138.t1 | AT2G32250 | 23.214 | 672 | 382 | 20 | 2 | 666 | 75 | 619 | 1.56e-34 | 141 |
MS.gene074138.t1 | AT2G32250 | 23.214 | 672 | 382 | 20 | 2 | 666 | 34 | 578 | 1.58e-34 | 141 |
MS.gene074138.t1 | AT2G32250 | 23.065 | 672 | 383 | 19 | 2 | 666 | 75 | 619 | 1.65e-34 | 141 |
MS.gene074138.t1 | AT2G32250 | 23.065 | 672 | 383 | 19 | 2 | 666 | 75 | 619 | 1.65e-34 | 141 |
MS.gene074138.t1 | AT1G80010 | 24.891 | 458 | 290 | 13 | 136 | 588 | 253 | 661 | 9.53e-33 | 135 |
MS.gene074138.t1 | AT1G52520 | 22.107 | 579 | 377 | 15 | 12 | 588 | 132 | 638 | 4.54e-29 | 124 |
MS.gene074138.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 145 | 409 | 106 | 369 | 4.01e-27 | 117 |
MS.gene074138.t1 | AT4G19990 | 34.586 | 133 | 73 | 3 | 517 | 647 | 438 | 558 | 8.57e-12 | 68.9 |
MS.gene074138.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 145 | 409 | 163 | 426 | 4.15e-27 | 118 |
MS.gene074138.t1 | AT4G19990 | 34.586 | 133 | 73 | 3 | 517 | 647 | 495 | 615 | 9.63e-12 | 68.9 |
MS.gene074138.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 145 | 409 | 177 | 440 | 4.57e-27 | 117 |
MS.gene074138.t1 | AT4G19990 | 34.586 | 133 | 73 | 3 | 517 | 647 | 509 | 629 | 1.03e-11 | 68.9 |
MS.gene074138.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 145 | 409 | 163 | 426 | 4.63e-27 | 117 |
MS.gene074138.t1 | AT4G19990 | 34.586 | 133 | 73 | 3 | 517 | 647 | 495 | 615 | 9.08e-12 | 68.9 |
MS.gene074138.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 145 | 409 | 163 | 426 | 4.63e-27 | 117 |
MS.gene074138.t1 | AT4G19990 | 34.586 | 133 | 73 | 3 | 517 | 647 | 495 | 615 | 9.08e-12 | 68.9 |
MS.gene074138.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 145 | 409 | 163 | 426 | 5.68e-27 | 117 |
MS.gene074138.t1 | AT4G19990 | 34.586 | 133 | 73 | 3 | 517 | 647 | 495 | 615 | 8.99e-12 | 69.3 |
MS.gene074138.t1 | AT4G19990 | 28.731 | 268 | 184 | 4 | 145 | 409 | 163 | 426 | 5.68e-27 | 117 |
MS.gene074138.t1 | AT4G19990 | 34.586 | 133 | 73 | 3 | 517 | 647 | 495 | 615 | 8.99e-12 | 69.3 |
MS.gene074138.t1 | AT5G28530 | 21.754 | 593 | 311 | 23 | 11 | 586 | 100 | 556 | 2.21e-17 | 87.0 |
MS.gene074138.t1 | AT5G28530 | 21.769 | 588 | 313 | 22 | 11 | 586 | 100 | 552 | 2.56e-17 | 86.7 |
Find 112 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 6.1:-6445942 | MS.gene074138:CDS |
AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 6.1:+6444807 | None:intergenic |
CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 6.1:-6445675 | MS.gene074138:CDS |
TACATTTCAGCTGCCTTTCT+TGG | 0.197151 | 6.1:-6446223 | MS.gene074138:intron |
CAACAAGATTATGCTCTATT+TGG | 0.198611 | 6.1:-6446746 | MS.gene074138:CDS |
TTCTCATACTCAACAGGAAT+TGG | 0.276027 | 6.1:+6447226 | None:intergenic |
CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 6.1:-6446190 | MS.gene074138:CDS |
TATGGTTTGAGGTTTCTTAT+TGG | 0.280533 | 6.1:+6446096 | None:intergenic |
TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 6.1:+6444813 | None:intergenic |
GGTTTCAAATGTTGATGTTT+TGG | 0.317051 | 6.1:-6445378 | MS.gene074138:CDS |
AATCAGATTTCGACTACAAT+TGG | 0.318540 | 6.1:-6445901 | MS.gene074138:CDS |
TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 6.1:-6444961 | MS.gene074138:CDS |
ACCAGCCTGGTCTGTGTATA+TGG | 0.341000 | 6.1:+6446078 | None:intergenic |
AATAATAAATATCGGCCATT+AGG | 0.344394 | 6.1:-6446689 | MS.gene074138:intron |
GAGGGATAATCATGCTGATT+TGG | 0.346844 | 6.1:-6445642 | MS.gene074138:CDS |
TTTGCTTCTTCCGAGCTATA+AGG | 0.347776 | 6.1:+6444745 | None:intergenic |
GCCGATATTTATTATTTGTT+CGG | 0.355120 | 6.1:+6446696 | None:intergenic |
GTCTTTAGTGCCAACATTCA+TGG | 0.367086 | 6.1:+6445085 | None:intergenic |
TATGCATTGGTCTTCAGTTT+GGG | 0.370760 | 6.1:-6445801 | MS.gene074138:CDS |
CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 6.1:-6444969 | MS.gene074138:CDS |
TCATGCTGATTTGGACTTCA+AGG | 0.389304 | 6.1:-6445633 | MS.gene074138:CDS |
ACCGAACAAATAATAAATAT+CGG | 0.389395 | 6.1:-6446697 | MS.gene074138:CDS |
GTATGCATTGGTCTTCAGTT+TGG | 0.392120 | 6.1:-6445802 | MS.gene074138:CDS |
AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 6.1:-6444821 | MS.gene074138:CDS |
TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 6.1:+6444831 | None:intergenic |
TTAGCTTTCTCATACTCAAC+AGG | 0.403265 | 6.1:+6447220 | None:intergenic |
GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 6.1:-6444936 | MS.gene074138:CDS |
CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 6.1:-6445253 | MS.gene074138:CDS |
GATTATGATCTTCAAACCTT+GGG | 0.413114 | 6.1:+6445330 | None:intergenic |
GGGTTGTCACAGTCGACATT+AGG | 0.419786 | 6.1:-6445295 | MS.gene074138:CDS |
CGATTATGATCTTCAAACCT+TGG | 0.425681 | 6.1:+6445329 | None:intergenic |
CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 6.1:-6447049 | MS.gene074138:CDS |
AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 6.1:-6447167 | MS.gene074138:CDS |
TGAATGTCTATAAGATATAT+AGG | 0.445219 | 6.1:-6447135 | MS.gene074138:CDS |
TGGTCTGTGTATATGGTTTG+AGG | 0.447350 | 6.1:+6446085 | None:intergenic |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 6.1:-6447184 | MS.gene074138:CDS |
CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 6.1:+6445152 | None:intergenic |
ACAAAATATGAAATCGGATA+AGG | 0.448270 | 6.1:-6447335 | None:intergenic |
CGTTATGCTTGTAATAAAGA+AGG | 0.449439 | 6.1:-6447301 | MS.gene074138:CDS |
GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 6.1:-6447019 | MS.gene074138:CDS |
CTCCTCAAAATAGTATTTGA+AGG | 0.453936 | 6.1:+6445499 | None:intergenic |
CTCAAGTAGCGCAAATGCTC+TGG | 0.460440 | 6.1:+6447079 | None:intergenic |
ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 6.1:-6445252 | MS.gene074138:CDS |
GGCCTACTTCAGACTTTAAG+TGG | 0.462107 | 6.1:-6445847 | MS.gene074138:CDS |
CGCAAACACTTGTAGAAAGC+TGG | 0.464466 | 6.1:+6445018 | None:intergenic |
CAATTCACAAAATATGAAAT+CGG | 0.467278 | 6.1:-6447341 | None:intergenic |
TTTGAGGAGGACACAACAAA+AGG | 0.469432 | 6.1:-6445485 | MS.gene074138:CDS |
AATAAAGAAGGTTTCAAGAA+GGG | 0.472567 | 6.1:-6447289 | MS.gene074138:CDS |
TGGTCTTTGCTCATGGCACA+TGG | 0.474278 | 6.1:-6446011 | MS.gene074138:CDS |
ACTGCTTCTGAAGACTTAGA+AGG | 0.474504 | 6.1:+6444885 | None:intergenic |
TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 6.1:+6447190 | None:intergenic |
CTGTCTGTGAACCATCTGTT+GGG | 0.487793 | 6.1:-6444860 | MS.gene074138:CDS |
TCTAATGACAACTCGTCAAA+AGG | 0.488137 | 6.1:-6446906 | MS.gene074138:CDS |
ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 6.1:+6446210 | None:intergenic |
ATCAGATTTCGACTACAATT+GGG | 0.491708 | 6.1:-6445900 | MS.gene074138:CDS |
CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 6.1:-6446893 | MS.gene074138:CDS |
ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 6.1:-6445661 | MS.gene074138:CDS |
TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 6.1:+6446801 | None:intergenic |
GCTGTCTGTGAACCATCTGT+TGG | 0.504047 | 6.1:-6444861 | MS.gene074138:CDS |
GACCACATAAGCTGACTGTT+GGG | 0.506733 | 6.1:+6445581 | None:intergenic |
CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 6.1:-6445814 | MS.gene074138:CDS |
ATCATAATCGACTTGATGAA+AGG | 0.507955 | 6.1:-6445316 | MS.gene074138:CDS |
TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 6.1:+6446935 | None:intergenic |
ATTGGTCTTCAGTTTGGGTG+AGG | 0.509410 | 6.1:-6445796 | MS.gene074138:CDS |
ATCCCAACAGTCAGCTTATG+TGG | 0.513497 | 6.1:-6445583 | MS.gene074138:CDS |
GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 6.1:+6445336 | None:intergenic |
CAAAATAGTATTTGAAGGAA+AGG | 0.519540 | 6.1:+6445504 | None:intergenic |
TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 6.1:+6445693 | None:intergenic |
TGTCTATAAGATATATAGGT+GGG | 0.523740 | 6.1:-6447131 | MS.gene074138:CDS |
TCATAATCGACTTGATGAAA+GGG | 0.526860 | 6.1:-6445315 | MS.gene074138:CDS |
TTGAGGAGGACACAACAAAA+GGG | 0.529908 | 6.1:-6445484 | MS.gene074138:CDS |
GACAGAAATTCCTTATAGCT+CGG | 0.533906 | 6.1:-6444755 | MS.gene074138:CDS |
CTGAAATCTACCATGAATGT+TGG | 0.534154 | 6.1:-6445095 | MS.gene074138:CDS |
AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 6.1:+6445698 | None:intergenic |
GAGAACATCTTATGAAGTGA+TGG | 0.551307 | 6.1:-6446987 | MS.gene074138:CDS |
AAATGCTCTGGTTTATGTAA+TGG | 0.552634 | 6.1:+6447091 | None:intergenic |
TACAAGTGTTTGCGCAGATG+CGG | 0.554469 | 6.1:-6445009 | MS.gene074138:CDS |
ACTTCAACAACGCACCAGCC+TGG | 0.557139 | 6.1:+6446065 | None:intergenic |
GGAATTGGATTGTCACATGT+TGG | 0.558073 | 6.1:+6447241 | None:intergenic |
TAATAAAGAAGGTTTCAAGA+AGG | 0.561053 | 6.1:-6447290 | MS.gene074138:CDS |
GGGTGAAGGTGTTGGAGGCA+CGG | 0.565649 | 6.1:-6446966 | MS.gene074138:CDS |
GGACCACATAAGCTGACTGT+TGG | 0.579264 | 6.1:+6445580 | None:intergenic |
TTTGGTGCAGTCCCAACAGA+TGG | 0.581566 | 6.1:+6444849 | None:intergenic |
GAAGCAAAATAAAGATGATG+AGG | 0.585911 | 6.1:-6444730 | MS.gene074138:CDS |
TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 6.1:+6445559 | None:intergenic |
AAGTGTTTGCGCAGATGCGG+AGG | 0.587269 | 6.1:-6445006 | MS.gene074138:CDS |
TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 6.1:-6444968 | MS.gene074138:CDS |
ACCATATACACAGACCAGGC+TGG | 0.590176 | 6.1:-6446079 | MS.gene074138:CDS |
ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 6.1:-6444973 | MS.gene074138:CDS |
GACAACTCGTCAAAAGGAGA+TGG | 0.599038 | 6.1:-6446900 | MS.gene074138:CDS |
TTGAAGGAAACCTTTCCCCA+AGG | 0.600566 | 6.1:-6445346 | MS.gene074138:CDS |
TTGATATCGTTGTGCTTGAG+TGG | 0.601464 | 6.1:+6445061 | None:intergenic |
AACTCGTCAAAAGGAGATGG+TGG | 0.603142 | 6.1:-6446897 | MS.gene074138:CDS |
GAAGTGATGGGTGAAGGTGT+TGG | 0.603704 | 6.1:-6446974 | MS.gene074138:CDS |
ATGTTGATAATGATAATGAG+AGG | 0.609132 | 6.1:-6445400 | MS.gene074138:CDS |
AGCCACTTAAAGTCTGAAGT+AGG | 0.617789 | 6.1:+6445845 | None:intergenic |
TGTTGATAATGATAATGAGA+GGG | 0.618346 | 6.1:-6445399 | MS.gene074138:CDS |
GTGATGGGTGAAGGTGTTGG+AGG | 0.621481 | 6.1:-6446971 | MS.gene074138:CDS |
ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 6.1:+6445331 | None:intergenic |
GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 6.1:-6446010 | MS.gene074138:CDS |
AGAACATCTTATGAAGTGAT+GGG | 0.643044 | 6.1:-6446986 | MS.gene074138:CDS |
CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 6.1:-6445660 | MS.gene074138:CDS |
ATGTCTATAAGATATATAGG+TGG | 0.643489 | 6.1:-6447132 | MS.gene074138:CDS |
GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 6.1:+6445110 | None:intergenic |
CATGTAGACATAAGAAACCC+CGG | 0.653675 | 6.1:+6445234 | None:intergenic |
TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 6.1:+6445539 | None:intergenic |
TCTTATGAAGTGATGGGTGA+AGG | 0.656961 | 6.1:-6446980 | MS.gene074138:CDS |
GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 6.1:-6444984 | MS.gene074138:CDS |
TGAAGACTTAGAAGGCGTAA+CGG | 0.661239 | 6.1:+6444893 | None:intergenic |
TGTGCCATGAGCAAAGACCA+TGG | 0.661258 | 6.1:+6446014 | None:intergenic |
TCAAACCATATACACAGACC+AGG | 0.671057 | 6.1:-6446083 | MS.gene074138:CDS |
TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 6.1:-6445251 | MS.gene074138:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACCGAACAAATAATAAATAT+CGG | - | chr6.1:6445347-6445366 | MS.gene074138:CDS | 20.0% |
!! | TGAATGTCTATAAGATATAT+AGG | - | chr6.1:6444909-6444928 | MS.gene074138:CDS | 20.0% |
!!! | AATTTAATGTTCTGGTTTAT+TGG | - | chr6.1:6445530-6445549 | MS.gene074138:CDS | 20.0% |
!!! | ATGATGAAAAACTGTTTTAA+TGG | - | chr6.1:6446172-6446191 | MS.gene074138:CDS | 20.0% |
!!! | TGAATGTTTATATTGATTGA+AGG | - | chr6.1:6445502-6445521 | MS.gene074138:CDS | 20.0% |
! | AAAACACCTTGAAAAACATT+CGG | + | chr6.1:6446010-6446029 | None:intergenic | 25.0% |
! | AAAGTGATTATGAAAAAGCT+AGG | - | chr6.1:6447262-6447281 | MS.gene074138:CDS | 25.0% |
! | AAGTGATTATGAAAAAGCTA+GGG | - | chr6.1:6447263-6447282 | MS.gene074138:CDS | 25.0% |
! | AATAAAGAAGGTTTCAAGAA+GGG | - | chr6.1:6444755-6444774 | MS.gene074138:CDS | 25.0% |
! | AATAATAAATATCGGCCATT+AGG | - | chr6.1:6445355-6445374 | MS.gene074138:CDS | 25.0% |
! | AGTACAAAATACTAACCTAA+TGG | + | chr6.1:6445373-6445392 | None:intergenic | 25.0% |
! | ATGTCTATAAGATATATAGG+TGG | - | chr6.1:6444912-6444931 | MS.gene074138:CDS | 25.0% |
! | CAAAATAGTATTTGAAGGAA+AGG | + | chr6.1:6446543-6446562 | None:intergenic | 25.0% |
! | CTTTAGTCATTTCAACATTA+TGG | - | chr6.1:6446369-6446388 | MS.gene074138:intron | 25.0% |
! | GCCGATATTTATTATTTGTT+CGG | + | chr6.1:6445351-6445370 | None:intergenic | 25.0% |
! | TAATAAAGAAGGTTTCAAGA+AGG | - | chr6.1:6444754-6444773 | MS.gene074138:CDS | 25.0% |
! | TGAAATTTGAATGAATGTTC+TGG | - | chr6.1:6445420-6445439 | MS.gene074138:CDS | 25.0% |
! | TGAATAAATGAAAAGCAAGA+TGG | + | chr6.1:6446508-6446527 | None:intergenic | 25.0% |
! | TGGATATCATAGTAAAAACT+TGG | + | chr6.1:6445226-6445245 | None:intergenic | 25.0% |
! | TGTCTATAAGATATATAGGT+GGG | - | chr6.1:6444913-6444932 | MS.gene074138:CDS | 25.0% |
! | TTTCGATGAGTTAACTAATT+TGG | - | chr6.1:6446102-6446121 | MS.gene074138:CDS | 25.0% |
!! | AGGTTTAGAATTTAATGTTC+TGG | - | chr6.1:6445522-6445541 | MS.gene074138:CDS | 25.0% |
!! | CAAAGTTTTTACAATTGAGA+AGG | - | chr6.1:6446603-6446622 | MS.gene074138:intron | 25.0% |
!! | TGTTGTATTTTGTTCTGATT+TGG | - | chr6.1:6445792-6445811 | MS.gene074138:CDS | 25.0% |
!! | TTCCTTCAAATACTATTTTG+AGG | - | chr6.1:6446543-6446562 | MS.gene074138:intron | 25.0% |
!!! | AAGACATAGCTAGTATTTTT+TGG | - | chr6.1:6445260-6445279 | MS.gene074138:CDS | 25.0% |
!!! | AGACATAGCTAGTATTTTTT+GGG | - | chr6.1:6445261-6445280 | MS.gene074138:CDS | 25.0% |
!!! | ATGTTGATAATGATAATGAG+AGG | - | chr6.1:6446644-6446663 | MS.gene074138:intron | 25.0% |
!!! | GCTTTAATAAATTCTAAAGC+TGG | - | chr6.1:6445025-6445044 | MS.gene074138:CDS | 25.0% |
!!! | TCTACATGTTTTCAAGATTT+TGG | - | chr6.1:6446825-6446844 | MS.gene074138:CDS | 25.0% |
!!! | TGAAAAACTGTTTTAATGGA+AGG | - | chr6.1:6446176-6446195 | MS.gene074138:CDS | 25.0% |
!!! | TGTTGATAATGATAATGAGA+GGG | - | chr6.1:6446645-6446664 | MS.gene074138:intron | 25.0% |
AAACACATATGATCTTTCCA+TGG | + | chr6.1:6445593-6445612 | None:intergenic | 30.0% | |
AAGAAAGACCAAATCCAATT+AGG | - | chr6.1:6447223-6447242 | MS.gene074138:CDS | 30.0% | |
AATCAGATTTCGACTACAAT+TGG | - | chr6.1:6446143-6446162 | MS.gene074138:CDS | 30.0% | |
AGAACATCTTATGAAGTGAT+GGG | - | chr6.1:6445058-6445077 | MS.gene074138:CDS | 30.0% | |
ATCAGATTTCGACTACAATT+GGG | - | chr6.1:6446144-6446163 | MS.gene074138:CDS | 30.0% | |
ATGATTGTCAAAACCAAGAA+AGG | + | chr6.1:6445837-6445856 | None:intergenic | 30.0% | |
ATTATGATCTTCAAACCTTG+GGG | + | chr6.1:6446716-6446735 | None:intergenic | 30.0% | |
CAACAAGATTATGCTCTATT+TGG | - | chr6.1:6445298-6445317 | MS.gene074138:CDS | 30.0% | |
CACAAATTCTAAGTCAAGAT+AGG | + | chr6.1:6445560-6445579 | None:intergenic | 30.0% | |
CGTTATGCTTGTAATAAAGA+AGG | - | chr6.1:6444743-6444762 | MS.gene074138:CDS | 30.0% | |
CTCCTCAAAATAGTATTTGA+AGG | + | chr6.1:6446548-6446567 | None:intergenic | 30.0% | |
CTGGTATATGTGTGTTAATT+TGG | - | chr6.1:6445459-6445478 | MS.gene074138:CDS | 30.0% | |
GAAGCAAAATAAAGATGATG+AGG | - | chr6.1:6447314-6447333 | MS.gene074138:CDS | 30.0% | |
GAGAATGCAAAGAAAAATCT+CGG | - | chr6.1:6446058-6446077 | MS.gene074138:CDS | 30.0% | |
GATTATGATCTTCAAACCTT+GGG | + | chr6.1:6446717-6446736 | None:intergenic | 30.0% | |
GTCTGCTTAATCCTAAAAAT+AGG | - | chr6.1:6444780-6444799 | MS.gene074138:CDS | 30.0% | |
TAAAGAAAAACCAGAGGAAA+GGG | - | chr6.1:6444844-6444863 | MS.gene074138:CDS | 30.0% | |
TAAAGAATCGAACAAGTGAA+TGG | + | chr6.1:6446354-6446373 | None:intergenic | 30.0% | |
TGGTGTATACTTGTTTACTA+CGG | + | chr6.1:6446488-6446507 | None:intergenic | 30.0% | |
TTCTTTGACCTAATTGGATT+TGG | + | chr6.1:6447234-6447253 | None:intergenic | 30.0% | |
TTTAAGTCCGAAAATCGAAA+AGG | + | chr6.1:6445112-6445131 | None:intergenic | 30.0% | |
TTTCTATTTACACAGCACAA+TGG | - | chr6.1:6445751-6445770 | MS.gene074138:CDS | 30.0% | |
! | AAATGCTCTGGTTTATGTAA+TGG | + | chr6.1:6444956-6444975 | None:intergenic | 30.0% |
! | AGCTGGAATATATTTGAAGT+TGG | - | chr6.1:6444877-6444896 | MS.gene074138:CDS | 30.0% |
! | GAATCTTCCTTTTCGATTTT+CGG | - | chr6.1:6445102-6445121 | MS.gene074138:CDS | 30.0% |
! | GCATCTGAAATATTTCTCAA+CGG | - | chr6.1:6447060-6447079 | MS.gene074138:CDS | 30.0% |
! | GGTTTCAAATGTTGATGTTT+TGG | - | chr6.1:6446666-6446685 | MS.gene074138:intron | 30.0% |
! | TATGGTTTGAGGTTTCTTAT+TGG | + | chr6.1:6445951-6445970 | None:intergenic | 30.0% |
! | TCAATTCCGAATGTTTTTCA+AGG | - | chr6.1:6446001-6446020 | MS.gene074138:CDS | 30.0% |
! | TTTGGTCTTTCTTTGAACTT+TGG | + | chr6.1:6447216-6447235 | None:intergenic | 30.0% |
!! | ATCATAATCGACTTGATGAA+AGG | - | chr6.1:6446728-6446747 | MS.gene074138:CDS | 30.0% |
!! | ATGTTCTGGTTTAGAATTGA+AGG | - | chr6.1:6445434-6445453 | MS.gene074138:CDS | 30.0% |
!! | CTTCAAATACTATTTTGAGG+AGG | - | chr6.1:6446546-6446565 | MS.gene074138:intron | 30.0% |
!! | GAGGAGTTTCTTATTTCTAA+AGG | - | chr6.1:6447108-6447127 | MS.gene074138:CDS | 30.0% |
!! | TCATAATCGACTTGATGAAA+GGG | - | chr6.1:6446729-6446748 | MS.gene074138:CDS | 30.0% |
!!! | CTGCACAATATGTTTTAAAG+CGG | - | chr6.1:6446893-6446912 | MS.gene074138:CDS | 30.0% |
!!! | TTCAAGATTTTGGAGTTCTT+AGG | - | chr6.1:6446835-6446854 | MS.gene074138:CDS | 30.0% |
ACATTATGGTTCAGAGAATG+AGG | - | chr6.1:6446383-6446402 | MS.gene074138:intron | 35.0% | |
CATTATGGTTCAGAGAATGA+GGG | - | chr6.1:6446384-6446403 | MS.gene074138:intron | 35.0% | |
CGAGAAGTAAATGAAGTTCA+AGG | - | chr6.1:6444995-6445014 | MS.gene074138:CDS | 35.0% | |
CGATTATGATCTTCAAACCT+TGG | + | chr6.1:6446718-6446737 | None:intergenic | 35.0% | |
CTAAAGAAAAACCAGAGGAA+AGG | - | chr6.1:6444843-6444862 | MS.gene074138:CDS | 35.0% | |
CTCATTCAAATCGTATGCAT+TGG | - | chr6.1:6446230-6446249 | MS.gene074138:intron | 35.0% | |
CTGAAATCTACCATGAATGT+TGG | - | chr6.1:6446949-6446968 | MS.gene074138:CDS | 35.0% | |
GAAAGCTAAAGAAAAACCAG+AGG | - | chr6.1:6444838-6444857 | MS.gene074138:CDS | 35.0% | |
GACAGAAATTCCTTATAGCT+CGG | - | chr6.1:6447289-6447308 | MS.gene074138:CDS | 35.0% | |
GAGAACATCTTATGAAGTGA+TGG | - | chr6.1:6445057-6445076 | MS.gene074138:CDS | 35.0% | |
TCTAATGACAACTCGTCAAA+AGG | - | chr6.1:6445138-6445157 | MS.gene074138:CDS | 35.0% | |
TTCTCATACTCAACAGGAAT+TGG | + | chr6.1:6444821-6444840 | None:intergenic | 35.0% | |
! | CATCGTAAGAGTGTGTTATT+TGG | - | chr6.1:6445854-6445873 | MS.gene074138:CDS | 35.0% |
! | TCTTTCAATGCTTTTCTTCG+TGG | - | chr6.1:6446313-6446332 | MS.gene074138:intron | 35.0% |
! | TTAGCTTTCTCATACTCAAC+AGG | + | chr6.1:6444827-6444846 | None:intergenic | 35.0% |
!! | CGCTTTAAAACATATTGTGC+AGG | + | chr6.1:6446895-6446914 | None:intergenic | 35.0% |
!! | TATGCATTGGTCTTCAGTTT+GGG | - | chr6.1:6446243-6446262 | MS.gene074138:intron | 35.0% |
!! | TCACATGTTGGCCTATTTTT+AGG | + | chr6.1:6444794-6444813 | None:intergenic | 35.0% |
!!! | AAGATTTTGGAGTTCTTAGG+TGG | - | chr6.1:6446838-6446857 | MS.gene074138:CDS | 35.0% |
!!! | AGACATCAGCTACTTTTGAT+TGG | - | chr6.1:6445897-6445916 | MS.gene074138:CDS | 35.0% |
!!! | CACAATATGTTTTAAAGCGG+TGG | - | chr6.1:6446896-6446915 | MS.gene074138:CDS | 35.0% |
!!! | GTTTTTCAAGGTGTTTTCCA+TGG | - | chr6.1:6446013-6446032 | MS.gene074138:CDS | 35.0% |
AATCGAACAAGTGAATGGTC+TGG | + | chr6.1:6446349-6446368 | None:intergenic | 40.0% | |
ACCTATGATCTTTGCATAGC+TGG | + | chr6.1:6445691-6445710 | None:intergenic | 40.0% | |
AGTCGCTTCTTTGACCTAAT+TGG | + | chr6.1:6447240-6447259 | None:intergenic | 40.0% | |
ATGTCGTATGTTTGAGAACC+GGG | - | chr6.1:6446792-6446811 | MS.gene074138:CDS | 40.0% | |
ATTTCTCAACGGTGTTCTTG+AGG | - | chr6.1:6447071-6447090 | MS.gene074138:CDS | 40.0% | |
CATGTAGACATAAGAAACCC+CGG | + | chr6.1:6446813-6446832 | None:intergenic | 40.0% | |
CATGTCGTATGTTTGAGAAC+CGG | - | chr6.1:6446791-6446810 | MS.gene074138:CDS | 40.0% | |
GATTTCAGCTTATCGACAGA+CGG | + | chr6.1:6446937-6446956 | None:intergenic | 40.0% | |
GGAATTGGATTGTCACATGT+TGG | + | chr6.1:6444806-6444825 | None:intergenic | 40.0% | |
GTCTTTAGTGCCAACATTCA+TGG | + | chr6.1:6446962-6446981 | None:intergenic | 40.0% | |
TACATTTCAGCTGCCTTTCT+TGG | - | chr6.1:6445821-6445840 | MS.gene074138:CDS | 40.0% | |
TCAAACCATATACACAGACC+AGG | - | chr6.1:6445961-6445980 | MS.gene074138:CDS | 40.0% | |
TCCAGCTATGCAAAGATCAT+AGG | - | chr6.1:6445687-6445706 | MS.gene074138:CDS | 40.0% | |
TGGTCTGTGTATATGGTTTG+AGG | + | chr6.1:6445962-6445981 | None:intergenic | 40.0% | |
TTGAGGAGGACACAACAAAA+GGG | - | chr6.1:6446560-6446579 | MS.gene074138:intron | 40.0% | |
TTGATATCGTTGTGCTTGAG+TGG | + | chr6.1:6446986-6447005 | None:intergenic | 40.0% | |
TTTGAGGAGGACACAACAAA+AGG | - | chr6.1:6446559-6446578 | MS.gene074138:intron | 40.0% | |
TTTGCTTCTTCCGAGCTATA+AGG | + | chr6.1:6447302-6447321 | None:intergenic | 40.0% | |
! | ACTGCTTCTGAAGACTTAGA+AGG | + | chr6.1:6447162-6447181 | None:intergenic | 40.0% |
! | AGCCACTTAAAGTCTGAAGT+AGG | + | chr6.1:6446202-6446221 | None:intergenic | 40.0% |
! | GAGGGATAATCATGCTGATT+TGG | - | chr6.1:6446402-6446421 | MS.gene074138:intron | 40.0% |
! | TGAAGACTTAGAAGGCGTAA+CGG | + | chr6.1:6447154-6447173 | None:intergenic | 40.0% |
! | TGGTTTAGAATTGAAGGCTC+TGG | - | chr6.1:6445440-6445459 | MS.gene074138:CDS | 40.0% |
! | TTTTCCATGGTCTTTGCTCA+TGG | - | chr6.1:6446026-6446045 | MS.gene074138:CDS | 40.0% |
!! | GTATGCATTGGTCTTCAGTT+TGG | - | chr6.1:6446242-6446261 | MS.gene074138:intron | 40.0% |
!! | GTTTTGGATGCAGAACTTGA+AGG | - | chr6.1:6446682-6446701 | MS.gene074138:intron | 40.0% |
!! | TCATGCTGATTTGGACTTCA+AGG | - | chr6.1:6446411-6446430 | MS.gene074138:intron | 40.0% |
!! | TCTTATGAAGTGATGGGTGA+AGG | - | chr6.1:6445064-6445083 | MS.gene074138:CDS | 40.0% |
!!! | GCTAGTATTTTTTGGGCAGA+TGG | - | chr6.1:6445268-6445287 | MS.gene074138:CDS | 40.0% |
AACTCGTCAAAAGGAGATGG+TGG | - | chr6.1:6445147-6445166 | MS.gene074138:CDS | 45.0% | |
ATAGCACAACTTCTCAAGCG+AGG | + | chr6.1:6445666-6445685 | None:intergenic | 45.0% | |
ATCCCAACAGTCAGCTTATG+TGG | - | chr6.1:6446461-6446480 | MS.gene074138:intron | 45.0% | |
ATTTGTGCTCTGTACAGCCA+TGG | - | chr6.1:6445573-6445592 | MS.gene074138:CDS | 45.0% | |
CGCAAACACTTGTAGAAAGC+TGG | + | chr6.1:6447029-6447048 | None:intergenic | 45.0% | |
CTGTCTGTGAACCATCTGTT+GGG | - | chr6.1:6447184-6447203 | MS.gene074138:CDS | 45.0% | |
GAAAAACCAGAGGAAAGGGT+TGG | - | chr6.1:6444848-6444867 | MS.gene074138:CDS | 45.0% | |
GACAACTCGTCAAAAGGAGA+TGG | - | chr6.1:6445144-6445163 | MS.gene074138:CDS | 45.0% | |
GACCACATAAGCTGACTGTT+GGG | + | chr6.1:6446466-6446485 | None:intergenic | 45.0% | |
GATCTTCAAACCTTGGGGAA+AGG | + | chr6.1:6446711-6446730 | None:intergenic | 45.0% | |
GGCCTACTTCAGACTTTAAG+TGG | - | chr6.1:6446197-6446216 | MS.gene074138:CDS | 45.0% | |
TACAAGTGTTTGCGCAGATG+CGG | - | chr6.1:6447035-6447054 | MS.gene074138:CDS | 45.0% | |
TGTCGTATGTTTGAGAACCG+GGG | - | chr6.1:6446793-6446812 | MS.gene074138:CDS | 45.0% | |
TGTCTTCTGCAGCATCAACT+TGG | + | chr6.1:6445246-6445265 | None:intergenic | 45.0% | |
TGTTCTTGAGGCAGGGAAAA+AGG | - | chr6.1:6447083-6447102 | MS.gene074138:CDS | 45.0% | |
TTACAACCAACCCTTTCCTC+TGG | + | chr6.1:6444857-6444876 | None:intergenic | 45.0% | |
TTGAAGGAAACCTTTCCCCA+AGG | - | chr6.1:6446698-6446717 | MS.gene074138:CDS | 45.0% | |
! | GTGAGGTCACATTTTACAGC+TGG | - | chr6.1:6446265-6446284 | MS.gene074138:intron | 45.0% |
!! | ATTGGTCTTCAGTTTGGGTG+AGG | - | chr6.1:6446248-6446267 | MS.gene074138:intron | 45.0% |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | - | chr6.1:6444860-6444879 | MS.gene074138:CDS | 45.0% |
ACCAGCCTGGTCTGTGTATA+TGG | + | chr6.1:6445969-6445988 | None:intergenic | 50.0% | |
ACCATATACACAGACCAGGC+TGG | - | chr6.1:6445965-6445984 | MS.gene074138:CDS | 50.0% | |
CTCAAGTAGCGCAAATGCTC+TGG | + | chr6.1:6444968-6444987 | None:intergenic | 50.0% | |
GCTGTCTGTGAACCATCTGT+TGG | - | chr6.1:6447183-6447202 | MS.gene074138:CDS | 50.0% | |
GGACCACATAAGCTGACTGT+TGG | + | chr6.1:6446467-6446486 | None:intergenic | 50.0% | |
GGGTTGTCACAGTCGACATT+AGG | - | chr6.1:6446749-6446768 | MS.gene074138:CDS | 50.0% | |
GGTCTTTGCTCATGGCACAT+GGG | - | chr6.1:6446034-6446053 | MS.gene074138:CDS | 50.0% | |
TCAACGGTGTTCTTGAGGCA+GGG | - | chr6.1:6447076-6447095 | MS.gene074138:CDS | 50.0% | |
TGGTCTTTGCTCATGGCACA+TGG | - | chr6.1:6446033-6446052 | MS.gene074138:CDS | 50.0% | |
TGTGCCATGAGCAAAGACCA+TGG | + | chr6.1:6446033-6446052 | None:intergenic | 50.0% | |
! | TTTGGTGCAGTCCCAACAGA+TGG | + | chr6.1:6447198-6447217 | None:intergenic | 50.0% |
!! | GAAGTGATGGGTGAAGGTGT+TGG | - | chr6.1:6445070-6445089 | MS.gene074138:CDS | 50.0% |
AAGTGTTTGCGCAGATGCGG+AGG | - | chr6.1:6447038-6447057 | MS.gene074138:CDS | 55.0% | |
ACTTCAACAACGCACCAGCC+TGG | + | chr6.1:6445982-6446001 | None:intergenic | 55.0% | |
CTCAACGGTGTTCTTGAGGC+AGG | - | chr6.1:6447075-6447094 | MS.gene074138:CDS | 55.0% | |
TGAGGCAGGGAAAAAGGCAG+AGG | - | chr6.1:6447089-6447108 | MS.gene074138:CDS | 55.0% | |
! | CGTCAAAAGGAGATGGTGGC+TGG | - | chr6.1:6445151-6445170 | MS.gene074138:CDS | 55.0% |
!! | GTGATGGGTGAAGGTGTTGG+AGG | - | chr6.1:6445073-6445092 | MS.gene074138:CDS | 55.0% |
!! | GGGTGAAGGTGTTGGAGGCA+CGG | - | chr6.1:6445078-6445097 | MS.gene074138:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.1 | gene | 6444716 | 6447350 | 6444716 | ID=MS.gene074138 |
chr6.1 | mRNA | 6444716 | 6447350 | 6444716 | ID=MS.gene074138.t1;Parent=MS.gene074138 |
chr6.1 | exon | 6446690 | 6447350 | 6446690 | ID=MS.gene074138.t1.exon1;Parent=MS.gene074138.t1 |
chr6.1 | CDS | 6446690 | 6447350 | 6446690 | ID=cds.MS.gene074138.t1;Parent=MS.gene074138.t1 |
chr6.1 | exon | 6444716 | 6446235 | 6444716 | ID=MS.gene074138.t1.exon2;Parent=MS.gene074138.t1 |
chr6.1 | CDS | 6444716 | 6446235 | 6444716 | ID=cds.MS.gene074138.t1;Parent=MS.gene074138.t1 |
Gene Sequence |
Protein sequence |