AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene074195

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene074195.t1 MTR_5g076070 48.485 264 134 1 38 301 19 280 2.81e-86 275
MS.gene074195.t1 MTR_1g070355 46.863 271 144 0 39 309 39 309 4.77e-83 276
MS.gene074195.t1 MTR_6g022080 47.000 200 106 0 39 238 50 249 1.48e-60 205
MS.gene074195.t1 MTR_6g022070 55.090 167 75 0 369 535 1 167 1.03e-58 203
MS.gene074195.t1 MTR_6g022070 31.538 130 81 4 615 741 167 291 2.46e-11 66.2
MS.gene074195.t1 MTR_8g066350 51.872 187 67 2 1 182 1 169 7.50e-53 181
MS.gene074195.t1 MTR_2g101460 49.219 128 65 0 55 182 36 163 2.59e-34 130
MS.gene074195.t1 MTR_2g101460 46.154 143 77 0 40 182 11 153 5.25e-34 129
MS.gene074195.t1 MTR_6g053140 43.949 157 76 3 25 180 58 203 4.43e-32 124
MS.gene074195.t1 MTR_6g051425 29.070 258 177 4 86 338 29 285 1.05e-31 127
MS.gene074195.t1 MTR_7g446480 37.500 176 108 1 151 324 140 315 1.14e-30 123
MS.gene074195.t1 MTR_7g446510 37.500 176 108 1 151 324 155 330 2.60e-30 122
MS.gene074195.t1 MTR_7g446520 30.000 280 172 5 33 309 49 307 1.11e-29 121
MS.gene074195.t1 MTR_3g448650 41.406 128 70 1 23 150 36 158 9.68e-27 108
MS.gene074195.t1 MTR_1g052260 43.511 131 65 3 35 156 28 158 4.59e-26 105
MS.gene074195.t1 MTR_8g045760 43.529 85 48 0 203 287 1 85 5.93e-22 93.6
MS.gene074195.t1 MTR_0268s0050 36.879 141 87 2 616 755 114 253 1.17e-21 95.9
MS.gene074195.t1 MTR_0060s0090 38.400 125 77 0 35 159 17 141 1.19e-21 92.8
MS.gene074195.t1 MTR_3g450850 28.512 242 159 8 86 315 59 298 1.59e-19 91.3
MS.gene074195.t1 MTR_4g035820 25.263 285 187 7 43 319 58 324 2.06e-19 93.6
MS.gene074195.t1 MTR_4g050510 36.090 133 71 2 60 192 64 182 2.67e-16 79.0
MS.gene074195.t1 MTR_6g463250 39.394 99 45 2 61 159 75 158 5.28e-16 77.0
MS.gene074195.t1 MTR_0604s0020 48.649 74 38 0 85 158 3 76 6.37e-16 73.6
MS.gene074195.t1 MTR_7g028855 27.749 191 135 2 25 215 74 261 1.91e-14 77.0
MS.gene074195.t1 MTR_2g069720 35.238 105 66 1 4 108 29 131 2.89e-14 72.0
MS.gene074195.t1 MTR_0645s0010 42.857 91 49 2 447 537 1 88 6.69e-14 69.3
MS.gene074195.t1 MTR_0558s0020 24.082 245 167 5 89 314 51 295 1.20e-13 72.8
MS.gene074195.t1 MTR_0402s0040 28.655 171 106 5 84 247 36 197 2.03e-12 70.9
MS.gene074195.t1 MTR_8g446020 25.140 179 130 2 138 314 79 255 3.37e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene074195.t1 AT4G38180 31.947 601 382 8 44 632 52 637 1.70e-98 323
MS.gene074195.t1 AT3G22170 27.856 639 401 14 14 629 17 618 2.50e-73 256
MS.gene074195.t1 AT3G22170 27.856 639 401 14 14 629 17 618 2.50e-73 256
MS.gene074195.t1 AT1G76320 29.711 589 378 14 86 663 9 572 7.92e-73 251
MS.gene074195.t1 AT1G76320 29.373 606 389 15 86 680 9 586 1.07e-72 252
MS.gene074195.t1 AT1G76320 29.373 606 389 15 86 680 9 586 1.07e-72 252
MS.gene074195.t1 AT1G76320 29.373 606 389 15 86 680 9 586 1.30e-72 252
MS.gene074195.t1 AT4G15090 27.679 560 384 9 85 632 62 612 1.74e-72 253
MS.gene074195.t1 AT4G15090 27.679 560 384 9 85 632 62 612 1.74e-72 253
MS.gene074195.t1 AT4G15090 27.679 560 384 9 85 632 62 612 1.74e-72 253
MS.gene074195.t1 AT4G15090 27.679 560 384 9 85 632 62 612 1.74e-72 253
MS.gene074195.t1 AT4G15090 27.679 560 384 9 85 632 62 612 1.74e-72 253
MS.gene074195.t1 AT2G27110 27.536 552 363 10 89 634 64 584 1.84e-69 246
MS.gene074195.t1 AT2G27110 27.536 552 363 10 89 634 64 584 1.84e-69 246
MS.gene074195.t1 AT2G27110 30.583 412 275 4 228 634 34 439 6.88e-67 236
MS.gene074195.t1 AT3G06250 27.057 547 346 10 89 629 205 704 1.96e-66 236
MS.gene074195.t1 AT3G06250 27.057 547 346 10 89 629 205 704 1.96e-66 236
MS.gene074195.t1 AT3G06250 27.057 547 346 10 89 629 205 704 1.96e-66 236
MS.gene074195.t1 AT5G18960 26.776 549 348 12 89 629 226 728 3.74e-62 224
MS.gene074195.t1 AT5G18960 26.776 549 348 12 89 629 226 728 3.74e-62 224
MS.gene074195.t1 AT4G38170 30.137 365 241 6 273 629 41 399 9.69e-59 209
MS.gene074195.t1 AT1G80010 29.174 569 364 14 86 629 107 661 6.67e-57 208
MS.gene074195.t1 AT4G19990 25.514 584 366 13 86 643 33 573 3.07e-54 201
MS.gene074195.t1 AT4G19990 25.514 584 366 13 86 643 33 573 3.07e-54 201
MS.gene074195.t1 AT4G19990 25.514 584 366 13 86 643 47 587 3.14e-54 201
MS.gene074195.t1 AT4G19990 25.514 584 366 13 86 643 33 573 3.50e-54 201
MS.gene074195.t1 AT4G19990 25.514 584 366 13 86 643 33 573 5.74e-54 200
MS.gene074195.t1 AT4G19990 25.514 584 366 13 86 643 33 573 5.74e-54 200
MS.gene074195.t1 AT2G32250 28.325 406 278 5 266 666 146 543 5.54e-53 197
MS.gene074195.t1 AT2G32250 28.325 406 278 5 266 666 146 543 6.02e-53 197
MS.gene074195.t1 AT2G32250 28.325 406 278 5 266 666 187 584 6.13e-53 197
MS.gene074195.t1 AT2G32250 28.325 406 278 5 266 666 187 584 7.91e-53 197
MS.gene074195.t1 AT2G32250 28.325 406 278 5 266 666 187 584 7.91e-53 197
MS.gene074195.t1 AT2G32250 28.325 406 278 5 266 666 187 584 7.91e-53 197
MS.gene074195.t1 AT2G32250 28.325 406 278 5 266 666 187 584 8.06e-53 197
MS.gene074195.t1 AT2G32250 28.325 406 278 5 266 666 187 584 8.06e-53 197
MS.gene074195.t1 AT5G28530 25.532 564 389 11 86 628 67 620 1.24e-52 195
MS.gene074195.t1 AT5G28530 25.524 572 375 13 86 628 67 616 1.68e-52 194
MS.gene074195.t1 AT5G28530 25.524 572 375 13 86 628 67 616 1.68e-52 194
MS.gene074195.t1 AT1G10240 25.623 562 392 11 80 626 54 604 1.77e-51 191
MS.gene074195.t1 AT1G10240 25.623 562 392 11 80 626 54 604 1.77e-51 191
MS.gene074195.t1 AT4G19990 24.955 553 355 11 112 643 3 516 3.18e-51 191
MS.gene074195.t1 AT1G52520 25.714 630 404 16 29 629 44 638 3.61e-48 182
MS.gene074195.t1 AT5G28530 23.188 552 354 12 86 628 67 557 6.99e-34 138
MS.gene074195.t1 AT5G28530 23.214 560 340 14 86 628 67 553 1.07e-33 138

Find 157 sgRNAs with CRISPR-Local

Find 201 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTTAGTTCTAACCCTATT+TGG 0.128040 6.1:-4965255 None:intergenic
AGTTGAGTATAGATGATTTA+TGG 0.151163 6.1:+4963324 MS.gene074195:CDS
GTTTGAATTACATGAGATTT+AGG 0.165065 6.1:+4964599 MS.gene074195:CDS
AGATGACAAATTATGATATT+TGG 0.232106 6.1:+4963690 MS.gene074195:CDS
CATGCACTGTTATTGATTCT+AGG 0.243686 6.1:+4964761 MS.gene074195:CDS
GAAGGCCTTCACGCACAATT+TGG 0.260435 6.1:+4964520 MS.gene074195:CDS
AGGGAAGTAGAAGCAGATTT+TGG 0.266967 6.1:+4964619 MS.gene074195:CDS
GCAACCTCTTCTGTTGTTCC+AGG 0.291028 6.1:-4963221 None:intergenic
AACGAGGAGTTTGGCGATAT+CGG 0.298205 6.1:+4965456 MS.gene074195:CDS
AGCAGACCTTTGTATGTTAT+AGG 0.299097 6.1:+4963465 MS.gene074195:CDS
AAAATACAATACTATGATTA+TGG 0.299516 6.1:-4964084 None:intergenic
GAAGGCTTTCACATTTGTTT+TGG 0.311863 6.1:+4963945 MS.gene074195:CDS
CCTATACTTGAGAGTGTTGC+TGG 0.316186 6.1:+4964679 MS.gene074195:CDS
GAATCCAATGCCATTGATAA+TGG 0.319184 6.1:+4965420 MS.gene074195:CDS
AGAAATCAAGCAAATTGTTT+TGG 0.327261 6.1:-4964558 None:intergenic
TTTAACTTGTTATGTTTATA+CGG 0.327417 6.1:+4964789 MS.gene074195:CDS
TTTGAATTACATGAGATTTA+GGG 0.329750 6.1:+4964600 MS.gene074195:CDS
TTGCTTATTATGTAGGATTT+GGG 0.330556 6.1:+4963155 MS.gene074195:intron
ATCCGTGGTAAATTCTTTGC+TGG 0.332956 6.1:+4964475 MS.gene074195:CDS
TTTACCATGGTCCCTTTGTT+TGG 0.333858 6.1:-4965307 None:intergenic
AGACACTGCTGAATCCAAAT+AGG 0.334078 6.1:+4965241 MS.gene074195:CDS
ACCCAAGAGCACATGTAATA+TGG 0.338001 6.1:+4964821 MS.gene074195:CDS
CGATATCGGAAATGTTGATA+TGG 0.343004 6.1:+4965470 MS.gene074195:CDS
GGCAAAGGTGTTTCTAAAAC+AGG 0.346039 6.1:-4964658 None:intergenic
TGCCATATTACATGTGCTCT+TGG 0.350833 6.1:-4964823 None:intergenic
ATACAAAGGTCTGCTGAATT+AGG 0.354056 6.1:-4963457 None:intergenic
AAGATATTCACACGCGGCTT+TGG 0.358026 6.1:-4963864 None:intergenic
TCCTCAACAAAGGCAATATT+AGG 0.358068 6.1:-4965219 None:intergenic
TTAGCGATGAAACAATGTTT+TGG 0.375310 6.1:+4963900 MS.gene074195:CDS
CCGGAAGCATTCCCTTGAAT+TGG 0.376341 6.1:-4963658 None:intergenic
TTTGAACATCGTAACCTTGC+CGG 0.386902 6.1:+4964945 MS.gene074195:CDS
ATTGATGAGAACGAGGAGTT+TGG 0.387151 6.1:+4965447 MS.gene074195:CDS
GTGGTTACTTGAACAACTAT+TGG 0.394699 6.1:+4964147 MS.gene074195:CDS
GAACATGCTCTCCGTAGAAT+TGG 0.400568 6.1:-4964739 None:intergenic
AAGGCCTTCACGCACAATTT+GGG 0.401284 6.1:+4964521 MS.gene074195:CDS
CGGCATAAGGTTGATGATAA+AGG 0.401985 6.1:+4963923 MS.gene074195:CDS
CCGCACCTCACACGAGCTCT+TGG 0.404430 6.1:-4963539 None:intergenic
GATATGATGGTCACTGAGTT+TGG 0.407993 6.1:+4964388 MS.gene074195:CDS
AAATTCAGAAATTGTATGTT+GGG 0.414460 6.1:+4964331 MS.gene074195:CDS
TTGGACTGGAAAATCACAAA+TGG 0.423074 6.1:+4964407 MS.gene074195:CDS
CACTTGAAGGTGAGACTAGT+TGG 0.424002 6.1:-4964859 None:intergenic
GTTCTATCTCAAAATCCATT+TGG 0.424686 6.1:+4965387 MS.gene074195:CDS
TGTTGGGTGACTACGATGTT+GGG 0.425474 6.1:+4964347 MS.gene074195:CDS
CCAATTCAAGGGAATGCTTC+CGG 0.427188 6.1:+4963658 MS.gene074195:CDS
TGAACACGTGATAGCCGTTT+TGG 0.429315 6.1:+4964918 MS.gene074195:CDS
GGAAAATCACAAATGGGTTA+AGG 0.431588 6.1:+4964414 MS.gene074195:CDS
CCTTTCGCATGAGCACTTGA+AGG 0.445772 6.1:-4964872 None:intergenic
CCAAATAGGGTTAGAACTAA+AGG 0.448859 6.1:+4965255 MS.gene074195:CDS
TTGGGGAGTTTAAGCGTAAG+TGG 0.449176 6.1:+4964365 MS.gene074195:CDS
TGTGGTATATGTAGGATTGT+AGG 0.460432 6.1:+4965342 MS.gene074195:CDS
GCCATATTACATGTGCTCTT+GGG 0.461414 6.1:-4964822 None:intergenic
CCAGCAACACTCTCAAGTAT+AGG 0.471863 6.1:-4964679 None:intergenic
TTGGCAATGAGAAAAGCTAT+TGG 0.473791 6.1:+4964217 MS.gene074195:CDS
GAGGTTGCAGATGGCACTAA+TGG 0.478378 6.1:+4963236 MS.gene074195:CDS
GACACTGCTGAATCCAAATA+GGG 0.480012 6.1:+4965242 MS.gene074195:CDS
GATTCAGCTTGATTACCAAA+TGG 0.482585 6.1:-4965402 None:intergenic
GGTTTGTTTGCTAATGAAGC+TGG 0.482853 6.1:+4963761 MS.gene074195:CDS
GGCAACTGCCGTGAATTGCT+TGG 0.487437 6.1:+4963274 MS.gene074195:CDS
AATGTTGGATGACCAATTCA+AGG 0.489800 6.1:+4963646 MS.gene074195:CDS
ATCAATGTGTCCATTATCAA+TGG 0.492096 6.1:-4965430 None:intergenic
AATGTCTTCCAAGCAATTCA+CGG 0.494836 6.1:-4963282 None:intergenic
TCTTATTCCAACCAATTCTA+CGG 0.498289 6.1:+4964728 MS.gene074195:CDS
TTTGTCATCTTCCTATGTGC+CGG 0.501947 6.1:-4963677 None:intergenic
TGGACTGGAAAATCACAAAT+GGG 0.503516 6.1:+4964408 MS.gene074195:CDS
CCTTTGTATGTTATAGGCAA+GGG 0.503564 6.1:+4963471 MS.gene074195:CDS
CAAAGAATTTACCACGGATG+TGG 0.505462 6.1:-4964471 None:intergenic
GTGTCCATTATCAATGGCAT+TGG 0.506607 6.1:-4965424 None:intergenic
TCATAATCGCAAGTCTTGTC+CGG 0.508285 6.1:+4965365 MS.gene074195:CDS
TGAACAACTATTGGAAGCAA+TGG 0.514794 6.1:+4964156 MS.gene074195:CDS
GCCGCAAAAGCAAAGTTGTA+AGG 0.517061 6.1:+4963420 MS.gene074195:CDS
ATACTTGTTCCTCTTGTATG+TGG 0.519775 6.1:-4964026 None:intergenic
AAAATTCAGAAATTGTATGT+TGG 0.523468 6.1:+4964330 MS.gene074195:CDS
CACAAACTTGTGGTATATGT+AGG 0.523563 6.1:+4965334 MS.gene074195:CDS
ACCTTTGTATGTTATAGGCA+AGG 0.523646 6.1:+4963470 MS.gene074195:CDS
CACTAATGGTAACAAATTTG+AGG 0.523859 6.1:+4963250 MS.gene074195:CDS
AATGAGCATAGTTATGATCC+TGG 0.524091 6.1:+4963203 MS.gene074195:CDS
CCTTCAAGTGCTCATGCGAA+AGG 0.525167 6.1:+4964872 MS.gene074195:CDS
CTCCAGAAAATACAACCAAT+GGG 0.526122 6.1:-4964054 None:intergenic
TGCGAAAGGTTTGAGTCCCT+CGG 0.526391 6.1:+4964886 MS.gene074195:CDS
ACACAATCTGTGGTGACACT+TGG 0.527185 6.1:-4964251 None:intergenic
CACAATCTGTGGTGACACTT+GGG 0.528250 6.1:-4964250 None:intergenic
ACCTAATATTGCCTTTGTTG+AGG 0.528635 6.1:+4965218 MS.gene074195:CDS
GCCGTGGCAGCTGTGAAGTG+TGG 0.531456 6.1:+4965102 MS.gene074195:CDS
GAACAACTATTGGAAGCAAT+GGG 0.533141 6.1:+4964157 MS.gene074195:CDS
GATGTTCAAATACACCAAAA+CGG 0.533380 6.1:-4964932 None:intergenic
TAAGCGTAAGTGGGATATGA+TGG 0.536902 6.1:+4964375 MS.gene074195:CDS
AAATTGATTATTGTTGACAT+TGG 0.538470 6.1:-4964302 None:intergenic
GGGAAATTTGTTATTGTCTG+AGG 0.539782 6.1:+4963175 MS.gene074195:CDS
GAACAAGTATTTGTGCCCAT+TGG 0.543961 6.1:+4964039 MS.gene074195:CDS
ACTCCAGAAAATACAACCAA+TGG 0.549257 6.1:-4964055 None:intergenic
ATGTTGGGTGACTACGATGT+TGG 0.550614 6.1:+4964346 MS.gene074195:CDS
TGAACATAATCATTCAATGT+TGG 0.554622 6.1:+4963631 MS.gene074195:CDS
TGTACGATAAGCGTCATATG+TGG 0.557922 6.1:+4964440 MS.gene074195:CDS
AGTCATAACTGATGGTGACT+TGG 0.558049 6.1:+4964198 MS.gene074195:CDS
AGGGTTAGAACTAAAGGATG+TGG 0.560571 6.1:+4965261 MS.gene074195:CDS
TTGTTTGCTAATGAAGCTGG+TGG 0.564693 6.1:+4963764 MS.gene074195:CDS
CTTCACATCGAGAAGTTGTA+CGG 0.567284 6.1:-4964501 None:intergenic
ATGAGCAACATGCGACAAGT+TGG 0.567690 6.1:+4963716 MS.gene074195:CDS
GTGCATATTGATGTAAATAG+TGG 0.570026 6.1:+4963581 MS.gene074195:CDS
ATGCTCTCCGTAGAATTGGT+TGG 0.571506 6.1:-4964735 None:intergenic
ATGTGGTTGAACTATGTAAG+AGG 0.575654 6.1:+4965076 MS.gene074195:CDS
TCACCCAGTCGATTCACCAC+AGG 0.578294 6.1:+4963061 MS.gene074195:CDS
TGAAACAAGGCTATCCGGCA+AGG 0.583237 6.1:-4964959 None:intergenic
AACTATTGGAAGCAATGGGT+GGG 0.587808 6.1:+4964161 MS.gene074195:CDS
AATGTACTACGCAAAAGTGT+AGG 0.588834 6.1:-4965129 None:intergenic
AGGGAATGCTTCCGGCACAT+AGG 0.589796 6.1:+4963666 MS.gene074195:CDS
CAAACCTGTGGTGAATCGAC+TGG 0.589959 6.1:-4963065 None:intergenic
GATGGTCACTGAGTTTGGAC+TGG 0.590126 6.1:+4964393 MS.gene074195:CDS
CAACTATTGGAAGCAATGGG+TGG 0.590247 6.1:+4964160 MS.gene074195:CDS
TGGGGAGTTTAAGCGTAAGT+GGG 0.593817 6.1:+4964366 MS.gene074195:CDS
CGTGTTCACATGCGATGCCG+AGG 0.593869 6.1:-4964903 None:intergenic
GGTTCTAGAAAATGCATGCA+AGG 0.596751 6.1:+4965176 MS.gene074195:CDS
ATGTTGGATGACCAATTCAA+GGG 0.598320 6.1:+4963647 MS.gene074195:CDS
CCCTTGCCTATAACATACAA+AGG 0.598990 6.1:-4963471 None:intergenic
AAAGAATTTACCACGGATGT+GGG 0.599554 6.1:-4964470 None:intergenic
ACCTCCCAAATTGTGCGTGA+AGG 0.601483 6.1:-4964525 None:intergenic
TTGCTGGTGAGCTGTATACA+AGG 0.604141 6.1:+4964695 MS.gene074195:CDS
GGTAAGTCAGTTTACACATG+TGG 0.605810 6.1:+4965059 MS.gene074195:CDS
GGGATTAGTAAAGAGAAAAG+TGG 0.608343 6.1:+4963491 MS.gene074195:CDS
ACAATCTGTGGTGACACTTG+GGG 0.609322 6.1:-4964249 None:intergenic
GTCACCACAGATTGTGTGCA+TGG 0.614597 6.1:+4964257 MS.gene074195:CDS
CCGTGGCAGCTGTGAAGTGT+GGG 0.616597 6.1:+4965103 MS.gene074195:CDS
CCTACGTCAGTCATAACTGA+TGG 0.619011 6.1:+4964190 MS.gene074195:CDS
CGTACAACTTCTCGATGTGA+AGG 0.624034 6.1:+4964502 MS.gene074195:CDS
GCCTTCACGCACAATTTGGG+AGG 0.625740 6.1:+4964524 MS.gene074195:CDS
GTACGATAAGCGTCATATGT+GGG 0.627193 6.1:+4964441 MS.gene074195:CDS
CCCACACTTCACAGCTGCCA+CGG 0.628270 6.1:-4965103 None:intergenic
ATAAGGTTGATGATAAAGGA+AGG 0.635329 6.1:+4963927 MS.gene074195:CDS
GTAAACTGACTTACCATGGT+AGG 0.636455 6.1:-4965051 None:intergenic
GTTGGGTGACTACGATGTTG+GGG 0.638884 6.1:+4964348 MS.gene074195:CDS
TGGGCTACTGCCCACATCCG+TGG 0.639851 6.1:+4964460 MS.gene074195:CDS
ACAACAGAAGAGGTTGCAGA+TGG 0.645232 6.1:+4963227 MS.gene074195:CDS
ACACTCTCAAGTATAGGCAA+AGG 0.646441 6.1:-4964673 None:intergenic
CAGCAGTGTCTCCTCAACAA+AGG 0.649281 6.1:-4965229 None:intergenic
CCAAGAGCTCGTGTGAGGTG+CGG 0.650655 6.1:+4963539 MS.gene074195:CDS
AAACCTGTGGTGAATCGACT+GGG 0.650947 6.1:-4963064 None:intergenic
ATGTGTAAACTGACTTACCA+TGG 0.652139 6.1:-4965055 None:intergenic
TTTAATTGAATCTCACACCA+AGG 0.652944 6.1:+4965155 MS.gene074195:CDS
AAAACCAAACAAAGGGACCA+TGG 0.653474 6.1:+4965303 MS.gene074195:CDS
TGATCCTGGAACAACAGAAG+AGG 0.655464 6.1:+4963217 MS.gene074195:CDS
ATATGTACAATGAACAAGAG+AGG 0.660521 6.1:+4963816 MS.gene074195:CDS
TAATGGTAACAAATTTGAGG+AGG 0.661974 6.1:+4963253 MS.gene074195:CDS
GTGTTCACATGCGATGCCGA+GGG 0.663133 6.1:-4964902 None:intergenic
AAAGTTGTAAGGAACAACAA+AGG 0.671963 6.1:+4963431 MS.gene074195:CDS
TTGATGTAAATAGTGGTCGG+TGG 0.686103 6.1:+4963588 MS.gene074195:CDS
GGTTGAACTATGTAAGAGGA+TGG 0.689381 6.1:+4965080 MS.gene074195:CDS
TGTTTCAAATGATCCTACCA+TGG 0.691975 6.1:+4965038 MS.gene074195:CDS
AAACAGAACATACATACGTG+TGG 0.692150 6.1:+4964128 MS.gene074195:CDS
GATGCCATGCACACAATCTG+TGG 0.697895 6.1:-4964261 None:intergenic
ACTATGTAAGAGGATGGCCG+TGG 0.705911 6.1:+4965086 MS.gene074195:CDS
ATCCAGCAAAGAATTTACCA+CGG 0.708229 6.1:-4964477 None:intergenic
TGGACACATTGATGAGAACG+AGG 0.714782 6.1:+4965440 MS.gene074195:CDS
ATATTGATGTAAATAGTGGT+CGG 0.715441 6.1:+4963585 MS.gene074195:CDS
CCATCAGTTATGACTGACGT+AGG 0.724351 6.1:-4964190 None:intergenic
GTGTGCCAAGAGCTCGTGTG+AGG 0.742198 6.1:+4963534 MS.gene074195:CDS
GCTTTCAAGATATTCACACG+CGG 0.773852 6.1:-4963870 None:intergenic
TGCTGGTGAGCTGTATACAA+GGG 0.788960 6.1:+4964696 MS.gene074195:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATACAATACTATGATTA+TGG - chr6.1:4964087-4964106 None:intergenic 15.0%
!! ACATACAAAAAACAAATATA+AGG - chr6.1:4963102-4963121 None:intergenic 15.0%
!!! TATTTTGTAGTTGTTAAAAA+TGG + chr6.1:4965534-4965553 MS.gene074195:intron 15.0%
!!! TTTAACTTGTTATGTTTATA+CGG + chr6.1:4964789-4964808 MS.gene074195:CDS 15.0%
!! AAAATTCAGAAATTGTATGT+TGG + chr6.1:4964330-4964349 MS.gene074195:CDS 20.0%
!! AAATTCAGAAATTGTATGTT+GGG + chr6.1:4964331-4964350 MS.gene074195:CDS 20.0%
!! AAATTGATTATTGTTGACAT+TGG - chr6.1:4964305-4964324 None:intergenic 20.0%
!! AGATGACAAATTATGATATT+TGG + chr6.1:4963690-4963709 MS.gene074195:CDS 20.0%
!! ATTTCAATTGCTTATTATGT+AGG + chr6.1:4963148-4963167 MS.gene074195:intron 20.0%
!! TACAAAAAACAAATATAAGG+AGG - chr6.1:4963099-4963118 None:intergenic 20.0%
!! TTTGAATTACATGAGATTTA+GGG + chr6.1:4964600-4964619 MS.gene074195:CDS 20.0%
!!! TCATTTGAAACATCATTTTT+AGG - chr6.1:4965030-4965049 None:intergenic 20.0%
! AGTTGAGTATAGATGATTTA+TGG + chr6.1:4963324-4963343 MS.gene074195:CDS 25.0%
! ATATTGATGTAAATAGTGGT+CGG + chr6.1:4963585-4963604 MS.gene074195:CDS 25.0%
! ATTGCTTATTATGTAGGATT+TGG + chr6.1:4963154-4963173 MS.gene074195:intron 25.0%
! GTTTGAATTACATGAGATTT+AGG + chr6.1:4964599-4964618 MS.gene074195:CDS 25.0%
! TAGCAAACAAACCAAAAATA+TGG - chr6.1:4963754-4963773 None:intergenic 25.0%
! TGAACATAATCATTCAATGT+TGG + chr6.1:4963631-4963650 MS.gene074195:CDS 25.0%
! TTGCTTATTATGTAGGATTT+GGG + chr6.1:4963155-4963174 MS.gene074195:intron 25.0%
! TTTGTGTTTGTAAATTTGCA+GGG + chr6.1:4965568-4965587 MS.gene074195:intron 25.0%
!! AGAAATCAAGCAAATTGTTT+TGG - chr6.1:4964561-4964580 None:intergenic 25.0%
!! AGATATCATTTTGTAGATGT+TGG + chr6.1:4963347-4963366 MS.gene074195:CDS 25.0%
!! ATCAAGACAAACCATATTTT+TGG + chr6.1:4963740-4963759 MS.gene074195:CDS 25.0%
!! CAAAGAGATTATGAGATTTT+TGG + chr6.1:4963983-4964002 MS.gene074195:CDS 25.0%
!! GATTGAATCTTTTGCATTTT+TGG - chr6.1:4964995-4965014 None:intergenic 25.0%
!!! AAGTTTGTGTTTTTTTACCA+TGG - chr6.1:4965323-4965342 None:intergenic 25.0%
!!! GATTTCAAAAAGTTGGTTTT+CGG + chr6.1:4963786-4963805 MS.gene074195:CDS 25.0%
AAAGTTGTAAGGAACAACAA+AGG + chr6.1:4963431-4963450 MS.gene074195:CDS 30.0%
ATATGTACAATGAACAAGAG+AGG + chr6.1:4963816-4963835 MS.gene074195:CDS 30.0%
ATCAATGTGTCCATTATCAA+TGG - chr6.1:4965433-4965452 None:intergenic 30.0%
CACTAATGGTAACAAATTTG+AGG + chr6.1:4963250-4963269 MS.gene074195:CDS 30.0%
GATGTTCAAATACACCAAAA+CGG - chr6.1:4964935-4964954 None:intergenic 30.0%
GGTAAAAAAACACAAACTTG+TGG + chr6.1:4965324-4965343 MS.gene074195:CDS 30.0%
GTGCATATTGATGTAAATAG+TGG + chr6.1:4963581-4963600 MS.gene074195:CDS 30.0%
GTTCTATCTCAAAATCCATT+TGG + chr6.1:4965387-4965406 MS.gene074195:CDS 30.0%
GTTTGTGTTTGTAAATTTGC+AGG + chr6.1:4965567-4965586 MS.gene074195:intron 30.0%
TAATGGTAACAAATTTGAGG+AGG + chr6.1:4963253-4963272 MS.gene074195:CDS 30.0%
TCTTATTCCAACCAATTCTA+CGG + chr6.1:4964728-4964747 MS.gene074195:CDS 30.0%
TTTAATTGAATCTCACACCA+AGG + chr6.1:4965155-4965174 MS.gene074195:CDS 30.0%
! CATAGTATTGTATTTTGTGC+TGG + chr6.1:4964091-4964110 MS.gene074195:CDS 30.0%
! TGGCGTTTCTATTTTACAAT+TGG + chr6.1:4963372-4963391 MS.gene074195:CDS 30.0%
! TTAGCGATGAAACAATGTTT+TGG + chr6.1:4963900-4963919 MS.gene074195:CDS 30.0%
!! ATAAGGTTGATGATAAAGGA+AGG + chr6.1:4963927-4963946 MS.gene074195:CDS 30.0%
!! ATAGCCTTGTTTCAAAAAGA+TGG + chr6.1:4964968-4964987 MS.gene074195:CDS 30.0%
!!! AATGGATTTTGAGATAGAAC+CGG - chr6.1:4965387-4965406 None:intergenic 30.0%
AAACAGAACATACATACGTG+TGG + chr6.1:4964128-4964147 MS.gene074195:CDS 35.0%
AAAGAATTTACCACGGATGT+GGG - chr6.1:4964473-4964492 None:intergenic 35.0%
AACCGCAAAAACCAAACAAA+GGG + chr6.1:4965296-4965315 MS.gene074195:CDS 35.0%
AATGAGCATAGTTATGATCC+TGG + chr6.1:4963203-4963222 MS.gene074195:CDS 35.0%
AATGTCTTCCAAGCAATTCA+CGG - chr6.1:4963285-4963304 None:intergenic 35.0%
AATGTTGGATGACCAATTCA+AGG + chr6.1:4963646-4963665 MS.gene074195:CDS 35.0%
ACCTAATATTGCCTTTGTTG+AGG + chr6.1:4965218-4965237 MS.gene074195:CDS 35.0%
ACCTTTGTATGTTATAGGCA+AGG + chr6.1:4963470-4963489 MS.gene074195:CDS 35.0%
ACTCCAGAAAATACAACCAA+TGG - chr6.1:4964058-4964077 None:intergenic 35.0%
AGCAGACCTTTGTATGTTAT+AGG + chr6.1:4963465-4963484 MS.gene074195:CDS 35.0%
ATACAAAGGTCTGCTGAATT+AGG - chr6.1:4963460-4963479 None:intergenic 35.0%
ATACTTGTTCCTCTTGTATG+TGG - chr6.1:4964029-4964048 None:intergenic 35.0%
ATCCAGCAAAGAATTTACCA+CGG - chr6.1:4964480-4964499 None:intergenic 35.0%
ATGTGGTTGAACTATGTAAG+AGG + chr6.1:4965076-4965095 MS.gene074195:CDS 35.0%
ATGTTGGATGACCAATTCAA+GGG + chr6.1:4963647-4963666 MS.gene074195:CDS 35.0%
CACAAACTTGTGGTATATGT+AGG + chr6.1:4965334-4965353 MS.gene074195:CDS 35.0%
CCAAATAGGGTTAGAACTAA+AGG + chr6.1:4965255-4965274 MS.gene074195:CDS 35.0%
CCTTTGTATGTTATAGGCAA+GGG + chr6.1:4963471-4963490 MS.gene074195:CDS 35.0%
CGATATCGGAAATGTTGATA+TGG + chr6.1:4965470-4965489 MS.gene074195:CDS 35.0%
CTCCAGAAAATACAACCAAT+GGG - chr6.1:4964057-4964076 None:intergenic 35.0%
GAACAACTATTGGAAGCAAT+GGG + chr6.1:4964157-4964176 MS.gene074195:CDS 35.0%
GAATCCAATGCCATTGATAA+TGG + chr6.1:4965420-4965439 MS.gene074195:CDS 35.0%
GATTCAGCTTGATTACCAAA+TGG - chr6.1:4965405-4965424 None:intergenic 35.0%
GTGGTTACTTGAACAACTAT+TGG + chr6.1:4964147-4964166 MS.gene074195:CDS 35.0%
TCCTCAACAAAGGCAATATT+AGG - chr6.1:4965222-4965241 None:intergenic 35.0%
TGAACAACTATTGGAAGCAA+TGG + chr6.1:4964156-4964175 MS.gene074195:CDS 35.0%
TGTGGTATATGTAGGATTGT+AGG + chr6.1:4965342-4965361 MS.gene074195:CDS 35.0%
TGTTTCAAATGATCCTACCA+TGG + chr6.1:4965038-4965057 MS.gene074195:CDS 35.0%
TTGGCAATGAGAAAAGCTAT+TGG + chr6.1:4964217-4964236 MS.gene074195:CDS 35.0%
! AATGTACTACGCAAAAGTGT+AGG - chr6.1:4965132-4965151 None:intergenic 35.0%
! AATTGGTATGCGAGTTTTCA+TGG + chr6.1:4963389-4963408 MS.gene074195:CDS 35.0%
! ATGTGTAAACTGACTTACCA+TGG - chr6.1:4965058-4965077 None:intergenic 35.0%
! ATTGGTATGCGAGTTTTCAT+GGG + chr6.1:4963390-4963409 MS.gene074195:CDS 35.0%
! GAAGGCTTTCACATTTGTTT+TGG + chr6.1:4963945-4963964 MS.gene074195:CDS 35.0%
! GGGATTAGTAAAGAGAAAAG+TGG + chr6.1:4963491-4963510 MS.gene074195:CDS 35.0%
! TCATTTTGTAGATGTTGGTG+TGG + chr6.1:4963352-4963371 MS.gene074195:CDS 35.0%
! TGGACTGGAAAATCACAAAT+GGG + chr6.1:4964408-4964427 MS.gene074195:CDS 35.0%
! TTGGACTGGAAAATCACAAA+TGG + chr6.1:4964407-4964426 MS.gene074195:CDS 35.0%
!! CATGCACTGTTATTGATTCT+AGG + chr6.1:4964761-4964780 MS.gene074195:CDS 35.0%
!! CCTTTAGTTCTAACCCTATT+TGG - chr6.1:4965258-4965277 None:intergenic 35.0%
!! GGAAAATCACAAATGGGTTA+AGG + chr6.1:4964414-4964433 MS.gene074195:CDS 35.0%
!! GGGAAATTTGTTATTGTCTG+AGG + chr6.1:4963175-4963194 MS.gene074195:CDS 35.0%
!! TCCTTACAACTTTGCTTTTG+CGG - chr6.1:4963424-4963443 None:intergenic 35.0%
!!! CTTTTTGAAACAAGGCTATC+CGG - chr6.1:4964967-4964986 None:intergenic 35.0%
!!! TCACATTTGTTTTGGTGTGA+CGG + chr6.1:4963953-4963972 MS.gene074195:CDS 35.0%
!!! TGGTCCATCTTTTTGAAACA+AGG - chr6.1:4964975-4964994 None:intergenic 35.0%
AAAACCAAACAAAGGGACCA+TGG + chr6.1:4965303-4965322 MS.gene074195:CDS 40.0%
AACTATTGGAAGCAATGGGT+GGG + chr6.1:4964161-4964180 MS.gene074195:CDS 40.0%
ACACTCTCAAGTATAGGCAA+AGG - chr6.1:4964676-4964695 None:intergenic 40.0%
AGACACTGCTGAATCCAAAT+AGG + chr6.1:4965241-4965260 MS.gene074195:CDS 40.0%
AGGGTTAGAACTAAAGGATG+TGG + chr6.1:4965261-4965280 MS.gene074195:CDS 40.0%
ATCCGTGGTAAATTCTTTGC+TGG + chr6.1:4964475-4964494 MS.gene074195:CDS 40.0%
ATTGATGAGAACGAGGAGTT+TGG + chr6.1:4965447-4965466 MS.gene074195:CDS 40.0%
CAAAGAATTTACCACGGATG+TGG - chr6.1:4964474-4964493 None:intergenic 40.0%
CAACCGCAAAAACCAAACAA+AGG + chr6.1:4965295-4965314 MS.gene074195:CDS 40.0%
CCCTTGCCTATAACATACAA+AGG - chr6.1:4963474-4963493 None:intergenic 40.0%
CTTCACATCGAGAAGTTGTA+CGG - chr6.1:4964504-4964523 None:intergenic 40.0%
GAACAAGTATTTGTGCCCAT+TGG + chr6.1:4964039-4964058 MS.gene074195:CDS 40.0%
GACACTGCTGAATCCAAATA+GGG + chr6.1:4965242-4965261 MS.gene074195:CDS 40.0%
GATATGATGGTCACTGAGTT+TGG + chr6.1:4964388-4964407 MS.gene074195:CDS 40.0%
GCCATATTACATGTGCTCTT+GGG - chr6.1:4964825-4964844 None:intergenic 40.0%
GCTTTCAAGATATTCACACG+CGG - chr6.1:4963873-4963892 None:intergenic 40.0%
GGTAAGTCAGTTTACACATG+TGG + chr6.1:4965059-4965078 MS.gene074195:CDS 40.0%
GGTTGAACTATGTAAGAGGA+TGG + chr6.1:4965080-4965099 MS.gene074195:CDS 40.0%
GTACGATAAGCGTCATATGT+GGG + chr6.1:4964441-4964460 MS.gene074195:CDS 40.0%
GTGTCCATTATCAATGGCAT+TGG - chr6.1:4965427-4965446 None:intergenic 40.0%
TAAGCGTAAGTGGGATATGA+TGG + chr6.1:4964375-4964394 MS.gene074195:CDS 40.0%
TGCCATATTACATGTGCTCT+TGG - chr6.1:4964826-4964845 None:intergenic 40.0%
TGTACGATAAGCGTCATATG+TGG + chr6.1:4964440-4964459 MS.gene074195:CDS 40.0%
TTGATGTAAATAGTGGTCGG+TGG + chr6.1:4963588-4963607 MS.gene074195:CDS 40.0%
TTTACCATGGTCCCTTTGTT+TGG - chr6.1:4965310-4965329 None:intergenic 40.0%
TTTGAACATCGTAACCTTGC+CGG + chr6.1:4964945-4964964 MS.gene074195:CDS 40.0%
TTTGTCATCTTCCTATGTGC+CGG - chr6.1:4963680-4963699 None:intergenic 40.0%
! ACCCAAGAGCACATGTAATA+TGG + chr6.1:4964821-4964840 MS.gene074195:CDS 40.0%
! AGGGAAGTAGAAGCAGATTT+TGG + chr6.1:4964619-4964638 MS.gene074195:CDS 40.0%
! AGTCATAACTGATGGTGACT+TGG + chr6.1:4964198-4964217 MS.gene074195:CDS 40.0%
! CTTTTGATGCCACATACAAG+AGG + chr6.1:4964017-4964036 MS.gene074195:CDS 40.0%
! GGTTTGTTTGCTAATGAAGC+TGG + chr6.1:4963761-4963780 MS.gene074195:CDS 40.0%
! GTAAACTGACTTACCATGGT+AGG - chr6.1:4965054-4965073 None:intergenic 40.0%
! TCATAATCGCAAGTCTTGTC+CGG + chr6.1:4965365-4965384 MS.gene074195:CDS 40.0%
! TTGTTTGCTAATGAAGCTGG+TGG + chr6.1:4963764-4963783 MS.gene074195:CDS 40.0%
!! CGGCATAAGGTTGATGATAA+AGG + chr6.1:4963923-4963942 MS.gene074195:CDS 40.0%
!! GCGATGAAACAATGTTTTGG+CGG + chr6.1:4963903-4963922 MS.gene074195:CDS 40.0%
!! GCTGGTGGATTTCAAAAAGT+TGG + chr6.1:4963779-4963798 MS.gene074195:CDS 40.0%
!! GGCAAAGGTGTTTCTAAAAC+AGG - chr6.1:4964661-4964680 None:intergenic 40.0%
!! GGTTCTAGAAAATGCATGCA+AGG + chr6.1:4965176-4965195 MS.gene074195:CDS 40.0%
!! TGCCCATTGGTTGTATTTTC+TGG + chr6.1:4964052-4964071 MS.gene074195:CDS 40.0%
!!! AACAATGTTTTGGCGGCATA+AGG + chr6.1:4963910-4963929 MS.gene074195:CDS 40.0%
!!! GCAGATTTTGGTTCTAGTCA+TGG + chr6.1:4964631-4964650 MS.gene074195:CDS 40.0%
!!! GCATGCATTTTCTAGAACCT+TGG - chr6.1:4965175-4965194 None:intergenic 40.0%
!!! GTCCCTTTGTTTGGTTTTTG+CGG - chr6.1:4965301-4965320 None:intergenic 40.0%
!!! TGTTTGGTTTTTGCGGTTGA+CGG - chr6.1:4965294-4965313 None:intergenic 40.0%
AAACCTGTGGTGAATCGACT+GGG - chr6.1:4963067-4963086 None:intergenic 45.0%
AACGAGGAGTTTGGCGATAT+CGG + chr6.1:4965456-4965475 MS.gene074195:CDS 45.0%
AAGATATTCACACGCGGCTT+TGG - chr6.1:4963867-4963886 None:intergenic 45.0%
AAGGCCTTCACGCACAATTT+GGG + chr6.1:4964521-4964540 MS.gene074195:CDS 45.0%
ACAACAGAAGAGGTTGCAGA+TGG + chr6.1:4963227-4963246 MS.gene074195:CDS 45.0%
ACAATCTGTGGTGACACTTG+GGG - chr6.1:4964252-4964271 None:intergenic 45.0%
ACACAATCTGTGGTGACACT+TGG - chr6.1:4964254-4964273 None:intergenic 45.0%
ATGAGCAACATGCGACAAGT+TGG + chr6.1:4963716-4963735 MS.gene074195:CDS 45.0%
ATGCTCTCCGTAGAATTGGT+TGG - chr6.1:4964738-4964757 None:intergenic 45.0%
ATGTTGGGTGACTACGATGT+TGG + chr6.1:4964346-4964365 MS.gene074195:CDS 45.0%
CAACTATTGGAAGCAATGGG+TGG + chr6.1:4964160-4964179 MS.gene074195:CDS 45.0%
CACAATCTGTGGTGACACTT+GGG - chr6.1:4964253-4964272 None:intergenic 45.0%
CACTTGAAGGTGAGACTAGT+TGG - chr6.1:4964862-4964881 None:intergenic 45.0%
CCAATTCAAGGGAATGCTTC+CGG + chr6.1:4963658-4963677 MS.gene074195:CDS 45.0%
CCAGCAACACTCTCAAGTAT+AGG - chr6.1:4964682-4964701 None:intergenic 45.0%
CCATCAGTTATGACTGACGT+AGG - chr6.1:4964193-4964212 None:intergenic 45.0%
CCTACGTCAGTCATAACTGA+TGG + chr6.1:4964190-4964209 MS.gene074195:CDS 45.0%
CGTACAACTTCTCGATGTGA+AGG + chr6.1:4964502-4964521 MS.gene074195:CDS 45.0%
GAACATGCTCTCCGTAGAAT+TGG - chr6.1:4964742-4964761 None:intergenic 45.0%
GAGGAGACAATACAAACCTG+TGG - chr6.1:4963080-4963099 None:intergenic 45.0%
GCCGCAAAAGCAAAGTTGTA+AGG + chr6.1:4963420-4963439 MS.gene074195:CDS 45.0%
TGATCCTGGAACAACAGAAG+AGG + chr6.1:4963217-4963236 MS.gene074195:CDS 45.0%
TGCTGGTGAGCTGTATACAA+GGG + chr6.1:4964696-4964715 MS.gene074195:CDS 45.0%
TGGACACATTGATGAGAACG+AGG + chr6.1:4965440-4965459 MS.gene074195:CDS 45.0%
TGGGGAGTTTAAGCGTAAGT+GGG + chr6.1:4964366-4964385 MS.gene074195:CDS 45.0%
TGTTGGGTGACTACGATGTT+GGG + chr6.1:4964347-4964366 MS.gene074195:CDS 45.0%
TTGCTGGTGAGCTGTATACA+AGG + chr6.1:4964695-4964714 MS.gene074195:CDS 45.0%
TTGGGGAGTTTAAGCGTAAG+TGG + chr6.1:4964365-4964384 MS.gene074195:CDS 45.0%
! TGAACACGTGATAGCCGTTT+TGG + chr6.1:4964918-4964937 MS.gene074195:CDS 45.0%
!! CCTATACTTGAGAGTGTTGC+TGG + chr6.1:4964679-4964698 MS.gene074195:CDS 45.0%
ACCTCCCAAATTGTGCGTGA+AGG - chr6.1:4964528-4964547 None:intergenic 50.0%
ACTATGTAAGAGGATGGCCG+TGG + chr6.1:4965086-4965105 MS.gene074195:CDS 50.0%
CAAACCTGTGGTGAATCGAC+TGG - chr6.1:4963068-4963087 None:intergenic 50.0%
CAGCAGTGTCTCCTCAACAA+AGG - chr6.1:4965232-4965251 None:intergenic 50.0%
CCTTCAAGTGCTCATGCGAA+AGG + chr6.1:4964872-4964891 MS.gene074195:CDS 50.0%
CCTTTCGCATGAGCACTTGA+AGG - chr6.1:4964875-4964894 None:intergenic 50.0%
GAAGGCCTTCACGCACAATT+TGG + chr6.1:4964520-4964539 MS.gene074195:CDS 50.0%
GAGGTTGCAGATGGCACTAA+TGG + chr6.1:4963236-4963255 MS.gene074195:CDS 50.0%
GATGCCATGCACACAATCTG+TGG - chr6.1:4964264-4964283 None:intergenic 50.0%
GATGGTCACTGAGTTTGGAC+TGG + chr6.1:4964393-4964412 MS.gene074195:CDS 50.0%
GCAACCTCTTCTGTTGTTCC+AGG - chr6.1:4963224-4963243 None:intergenic 50.0%
GTCACCACAGATTGTGTGCA+TGG + chr6.1:4964257-4964276 MS.gene074195:CDS 50.0%
GTTGGGTGACTACGATGTTG+GGG + chr6.1:4964348-4964367 MS.gene074195:CDS 50.0%
TGAAACAAGGCTATCCGGCA+AGG - chr6.1:4964962-4964981 None:intergenic 50.0%
TGCGAAAGGTTTGAGTCCCT+CGG + chr6.1:4964886-4964905 MS.gene074195:CDS 50.0%
! GAGCTCTTGGCACACGTTTT+CGG - chr6.1:4963529-4963548 None:intergenic 50.0%
! GCGAGTTTTCATGGGTTTGC+TGG + chr6.1:4963398-4963417 MS.gene074195:CDS 50.0%
!! ACACGTTTTCGGCTTGTGGA+TGG - chr6.1:4963518-4963537 None:intergenic 50.0%
!! CACGTTTTCGGCTTGTGGAT+GGG - chr6.1:4963517-4963536 None:intergenic 50.0%
!! CCGGAAGCATTCCCTTGAAT+TGG - chr6.1:4963661-4963680 None:intergenic 50.0%
AGGGAATGCTTCCGGCACAT+AGG + chr6.1:4963666-4963685 MS.gene074195:CDS 55.0%
GCCTTCACGCACAATTTGGG+AGG + chr6.1:4964524-4964543 MS.gene074195:CDS 55.0%
GGCAACTGCCGTGAATTGCT+TGG + chr6.1:4963274-4963293 MS.gene074195:CDS 55.0%
GTGTTCACATGCGATGCCGA+GGG - chr6.1:4964905-4964924 None:intergenic 55.0%
! TCACCCAGTCGATTCACCAC+AGG + chr6.1:4963061-4963080 MS.gene074195:CDS 55.0%
!! TGGCACACGTTTTCGGCTTG+TGG - chr6.1:4963522-4963541 None:intergenic 55.0%
CCAAGAGCTCGTGTGAGGTG+CGG + chr6.1:4963539-4963558 MS.gene074195:CDS 60.0%
CCCACACTTCACAGCTGCCA+CGG - chr6.1:4965106-4965125 None:intergenic 60.0%
CCGTGGCAGCTGTGAAGTGT+GGG + chr6.1:4965103-4965122 MS.gene074195:CDS 60.0%
CGTGTTCACATGCGATGCCG+AGG - chr6.1:4964906-4964925 None:intergenic 60.0%
GTGTGCCAAGAGCTCGTGTG+AGG + chr6.1:4963534-4963553 MS.gene074195:CDS 60.0%
CCGCACCTCACACGAGCTCT+TGG - chr6.1:4963542-4963561 None:intergenic 65.0%
GCCGTGGCAGCTGTGAAGTG+TGG + chr6.1:4965102-4965121 MS.gene074195:CDS 65.0%
TGGGCTACTGCCCACATCCG+TGG + chr6.1:4964460-4964479 MS.gene074195:CDS 65.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 4963032 4965600 4963032 ID=MS.gene074195
chr6.1 mRNA 4963032 4965600 4963032 ID=MS.gene074195.t1;Parent=MS.gene074195
chr6.1 exon 4963032 4963082 4963032 ID=MS.gene074195.t1.exon1;Parent=MS.gene074195.t1
chr6.1 CDS 4963032 4963082 4963032 ID=cds.MS.gene074195.t1;Parent=MS.gene074195.t1
chr6.1 exon 4963170 4965491 4963170 ID=MS.gene074195.t1.exon2;Parent=MS.gene074195.t1
chr6.1 CDS 4963170 4965491 4963170 ID=cds.MS.gene074195.t1;Parent=MS.gene074195.t1
chr6.1 exon 4965589 4965600 4965589 ID=MS.gene074195.t1.exon3;Parent=MS.gene074195.t1
chr6.1 CDS 4965589 4965600 4965589 ID=cds.MS.gene074195.t1;Parent=MS.gene074195.t1
Gene Sequence

>MS.gene074195

ATGGAGGATGTTGATTCTGAATCTGTTACTCACCCAGTCGATTCACCACAGGTTTGTATTGTCTCCTCCTTATATTTGTTTTTTGTATGTTGTGATTAGTTGTTAAAAATATTAAAATTTCAATTGCTTATTATGTAGGATTTGGGAAATTTGTTATTGTCTGAGGATGAGAATGAGCATAGTTATGATCCTGGAACAACAGAAGAGGTTGCAGATGGCACTAATGGTAACAAATTTGAGGAGGCAACTGCCGTGAATTGCTTGGAAGACATTTCAAGTATCAATTTCGAAGAGTTGAGTATAGATGATTTATGGAGATATCATTTTGTAGATGTTGGTGTGGCGTTTCTATTTTACAATTGGTATGCGAGTTTTCATGGGTTTGCTGGCCGCAAAAGCAAAGTTGTAAGGAACAACAAAGGAGACCTAATTCAGCAGACCTTTGTATGTTATAGGCAAGGGATTAGTAAAGAGAAAAGTGGCCCATCCACAAGCCGAAAACGTGTGCCAAGAGCTCGTGTGAGGTGCGGTTGCGAAGCAAAGTGTCGCGTGCATATTGATGTAAATAGTGGTCGGTGGTACATGAAGTTTTTTGACGATGAACATAATCATTCAATGTTGGATGACCAATTCAAGGGAATGCTTCCGGCACATAGGAAGATGACAAATTATGATATTTGGCGAATGAGCAACATGCGACAAGTTGGTATCAAGACAAACCATATTTTTGGTTTGTTTGCTAATGAAGCTGGTGGATTTCAAAAAGTTGGTTTTCGGAAGCAAGATATGTACAATGAACAAGAGAGGCAGCGATTAACTTCTTCTAAAGATGCCAAAGCCGCGTGTGAATATCTTGAAAGCTTGTGCGTTAGCGATGAAACAATGTTTTGGCGGCATAAGGTTGATGATAAAGGAAGGCTTTCACATTTGTTTTGGTGTGACGGTGCTGCACAAAGAGATTATGAGATTTTTGGTGATGTAGTTGCTTTTGATGCCACATACAAGAGGAACAAGTATTTGTGCCCATTGGTTGTATTTTCTGGAGTGAATCACCATAATCATAGTATTGTATTTTGTGCTGGTATTGTTTGTGATGAAACAGAACATACATACGTGTGGTTACTTGAACAACTATTGGAAGCAATGGGTGGGAAAAGTCCTACGTCAGTCATAACTGATGGTGACTTGGCAATGAGAAAAGCTATTGGAAAAGTTTTCCCCAAGTGTCACCACAGATTGTGTGCATGGCATCTGCTACGTAACGCTTCGACCAATGTCAACAATAATCAATTTGTGCTAAAATTCAGAAATTGTATGTTGGGTGACTACGATGTTGGGGAGTTTAAGCGTAAGTGGGATATGATGGTCACTGAGTTTGGACTGGAAAATCACAAATGGGTTAAGGAAATGTACGATAAGCGTCATATGTGGGCTACTGCCCACATCCGTGGTAAATTCTTTGCTGGATTCCGTACAACTTCTCGATGTGAAGGCCTTCACGCACAATTTGGGAGGTATGTTAACTACCAAAACAATTTGCTTGATTTCTTGAAACAATATTTTAGATGTTTGAATTACATGAGATTTAGGGAAGTAGAAGCAGATTTTGGTTCTAGTCATGGTGAACCTGTTTTAGAAACACCTTTGCCTATACTTGAGAGTGTTGCTGGTGAGCTGTATACAAGGGAGATGTTTCTCTTATTCCAACCAATTCTACGGAGAGCATGTTCATGCACTGTTATTGATTCTAGGAAAACTTTAACTTGTTATGTTTATACGGTCAGTAGATACCCAAGAGCACATGTAATATGGCAAGTTTCATTTTCTCCAACTAGTCTCACCTTCAAGTGCTCATGCGAAAGGTTTGAGTCCCTCGGCATCGCATGTGAACACGTGATAGCCGTTTTGGTGTATTTGAACATCGTAACCTTGCCGGATAGCCTTGTTTCAAAAAGATGGACCAAAAATGCAAAAGATTCAATCACTGTTTGTACACCTAAAAATGATGTTTCAAATGATCCTACCATGGTAAGTCAGTTTACACATGTGGTTGAACTATGTAAGAGGATGGCCGTGGCAGCTGTGAAGTGTGGGAAGCCTACACTTTTGCGTAGTACATTTGATTTAATTGAATCTCACACCAAGGTTCTAGAAAATGCATGCAAGGACGTTGATTCATCATATGTACCTAATATTGCCTTTGTTGAGGAGACACTGCTGAATCCAAATAGGGTTAGAACTAAAGGATGTGGTGCAACACCGTCAACCGCAAAAACCAAACAAAGGGACCATGGTAAAAAAACACAAACTTGTGGTATATGTAGGATTGTAGGTCATAATCGCAAGTCTTGTCCGGTTCTATCTCAAAATCCATTTGGTAATCAAGCTGAATCCAATGCCATTGATAATGGACACATTGATGAGAACGAGGAGTTTGGCGATATCGGAAATGTTGATATGGTTAGTTCTTTTTCACAAACGTACAAGATATTTATGATGCATTATTTTGTAGTTGTTAAAAATGGTTGACACTCTGTTTGTGTTTGTAAATTTGCAGGGTATGTATTGA
Protein sequence

>MS.gene074195.t1

MEDVDSESVTHPVDSPQDLGNLLLSEDENEHSYDPGTTEEVADGTNGNKFEEATAVNCLEDISSINFEELSIDDLWRYHFVDVGVAFLFYNWYASFHGFAGRKSKVVRNNKGDLIQQTFVCYRQGISKEKSGPSTSRKRVPRARVRCGCEAKCRVHIDVNSGRWYMKFFDDEHNHSMLDDQFKGMLPAHRKMTNYDIWRMSNMRQVGIKTNHIFGLFANEAGGFQKVGFRKQDMYNEQERQRLTSSKDAKAACEYLESLCVSDETMFWRHKVDDKGRLSHLFWCDGAAQRDYEIFGDVVAFDATYKRNKYLCPLVVFSGVNHHNHSIVFCAGIVCDETEHTYVWLLEQLLEAMGGKSPTSVITDGDLAMRKAIGKVFPKCHHRLCAWHLLRNASTNVNNNQFVLKFRNCMLGDYDVGEFKRKWDMMVTEFGLENHKWVKEMYDKRHMWATAHIRGKFFAGFRTTSRCEGLHAQFGRYVNYQNNLLDFLKQYFRCLNYMRFREVEADFGSSHGEPVLETPLPILESVAGELYTREMFLLFQPILRRACSCTVIDSRKTLTCYVYTVSRYPRAHVIWQVSFSPTSLTFKCSCERFESLGIACEHVIAVLVYLNIVTLPDSLVSKRWTKNAKDSITVCTPKNDVSNDPTMVSQFTHVVELCKRMAVAAVKCGKPTLLRSTFDLIESHTKVLENACKDVDSSYVPNIAFVEETLLNPNRVRTKGCGATPSTAKTKQRDHGKKTQTCGICRIVGHNRKSCPVLSQNPFGNQAESNAIDNGHIDENEEFGDIGNVDMGMY