Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074321.t1 | RHN50388.1 | 85.5 | 738 | 56 | 3 | 1 | 688 | 40 | 776 | 0.00E+00 | 1275.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074321.t1 | Q9FWQ5 | 47.6 | 687 | 290 | 9 | 62 | 683 | 1011 | 1692 | 6.1e-187 | 655.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074321.t1 | A0A396HCL0 | 85.5 | 738 | 56 | 3 | 1 | 688 | 40 | 776 | 0.0e+00 | 1275.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene074321.t1 | TR | TAZ |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074321.t1 | MTR_6g017010 | 84.553 | 738 | 56 | 4 | 1 | 688 | 40 | 769 | 0.0 | 1256 |
MS.gene074321.t1 | MTR_5g085310 | 79.050 | 716 | 89 | 6 | 19 | 675 | 312 | 1025 | 0.0 | 1140 |
MS.gene074321.t1 | MTR_3g107960 | 66.459 | 802 | 153 | 10 | 1 | 688 | 407 | 1206 | 0.0 | 1051 |
MS.gene074321.t1 | MTR_3g101100 | 66.038 | 795 | 143 | 10 | 19 | 688 | 603 | 1395 | 0.0 | 1015 |
MS.gene074321.t1 | MTR_5g017020 | 71.534 | 541 | 99 | 6 | 89 | 610 | 21 | 525 | 0.0 | 749 |
MS.gene074321.t1 | MTR_5g017020 | 64.148 | 622 | 119 | 9 | 89 | 688 | 21 | 560 | 0.0 | 742 |
MS.gene074321.t1 | MTR_6g017000 | 61.642 | 597 | 156 | 8 | 20 | 549 | 349 | 939 | 0.0 | 718 |
MS.gene074321.t1 | MTR_4g005050 | 43.955 | 794 | 320 | 13 | 12 | 685 | 909 | 1697 | 0.0 | 653 |
MS.gene074321.t1 | MTR_6g017140 | 60.970 | 474 | 136 | 6 | 64 | 520 | 7 | 448 | 0.0 | 575 |
MS.gene074321.t1 | MTR_0299s0030 | 60.426 | 235 | 40 | 3 | 364 | 549 | 69 | 299 | 6.42e-81 | 261 |
MS.gene074321.t1 | MTR_6g017130 | 50.980 | 204 | 37 | 4 | 471 | 673 | 249 | 390 | 2.79e-52 | 186 |
MS.gene074321.t1 | MTR_6g017120 | 84.946 | 93 | 14 | 0 | 253 | 345 | 8 | 100 | 2.55e-51 | 175 |
MS.gene074321.t1 | MTR_6g017135 | 91.209 | 91 | 7 | 1 | 194 | 283 | 11 | 101 | 4.21e-51 | 174 |
MS.gene074321.t1 | MTR_1g047930 | 83.673 | 98 | 16 | 0 | 174 | 271 | 277 | 374 | 1.01e-49 | 178 |
MS.gene074321.t1 | MTR_5g085317 | 80.851 | 94 | 18 | 0 | 335 | 428 | 1 | 94 | 1.49e-43 | 153 |
MS.gene074321.t1 | MTR_1g047940 | 49.744 | 195 | 33 | 5 | 494 | 688 | 71 | 200 | 3.62e-43 | 154 |
MS.gene074321.t1 | MTR_1g047940 | 39.837 | 123 | 57 | 4 | 331 | 450 | 4 | 112 | 8.01e-17 | 80.1 |
MS.gene074321.t1 | MTR_5g015680 | 29.167 | 216 | 118 | 9 | 488 | 674 | 46 | 255 | 2.44e-13 | 71.6 |
MS.gene074321.t1 | MTR_5g015680 | 29.167 | 216 | 118 | 9 | 488 | 674 | 141 | 350 | 5.94e-13 | 71.6 |
MS.gene074321.t1 | MTR_5g015680 | 29.167 | 216 | 118 | 9 | 488 | 674 | 180 | 389 | 7.76e-13 | 71.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074321.t1 | AT1G79000 | 48.316 | 683 | 283 | 9 | 68 | 685 | 1008 | 1685 | 0.0 | 665 |
MS.gene074321.t1 | AT1G79000 | 48.316 | 683 | 283 | 9 | 68 | 685 | 984 | 1661 | 0.0 | 665 |
MS.gene074321.t1 | AT1G79000 | 48.316 | 683 | 283 | 9 | 68 | 685 | 1008 | 1685 | 0.0 | 665 |
MS.gene074321.t1 | AT1G16710 | 43.522 | 795 | 323 | 13 | 12 | 685 | 876 | 1665 | 0.0 | 650 |
MS.gene074321.t1 | AT1G16710 | 43.522 | 795 | 323 | 13 | 12 | 685 | 879 | 1668 | 0.0 | 650 |
MS.gene074321.t1 | AT1G16710 | 43.522 | 795 | 323 | 13 | 12 | 685 | 879 | 1668 | 0.0 | 650 |
MS.gene074321.t1 | AT1G16710 | 43.522 | 795 | 323 | 13 | 12 | 685 | 879 | 1668 | 0.0 | 650 |
MS.gene074321.t1 | AT1G16710 | 43.522 | 795 | 323 | 13 | 12 | 685 | 879 | 1668 | 0.0 | 650 |
MS.gene074321.t1 | AT1G16710 | 43.522 | 795 | 323 | 13 | 12 | 685 | 840 | 1629 | 0.0 | 649 |
MS.gene074321.t1 | AT1G16710 | 43.522 | 795 | 323 | 13 | 12 | 685 | 840 | 1629 | 0.0 | 649 |
MS.gene074321.t1 | AT1G16710 | 43.522 | 795 | 323 | 13 | 12 | 685 | 840 | 1629 | 0.0 | 649 |
MS.gene074321.t1 | AT1G16710 | 43.522 | 795 | 323 | 13 | 12 | 685 | 905 | 1694 | 0.0 | 649 |
MS.gene074321.t1 | AT3G12980 | 43.990 | 782 | 314 | 14 | 19 | 685 | 885 | 1657 | 0.0 | 641 |
MS.gene074321.t1 | AT3G12980 | 43.990 | 782 | 314 | 14 | 19 | 685 | 804 | 1576 | 0.0 | 640 |
MS.gene074321.t1 | AT1G67220 | 43.741 | 663 | 304 | 13 | 68 | 666 | 706 | 1363 | 1.20e-180 | 551 |
MS.gene074321.t1 | AT1G55970 | 42.816 | 689 | 319 | 11 | 64 | 685 | 779 | 1459 | 5.18e-180 | 551 |
MS.gene074321.t1 | AT1G55970 | 42.961 | 689 | 304 | 12 | 64 | 685 | 779 | 1445 | 4.67e-178 | 546 |
MS.gene074321.t1 | AT1G16710 | 47.505 | 541 | 212 | 9 | 12 | 480 | 879 | 1419 | 2.18e-158 | 494 |
MS.gene074321.t1 | AT5G67480 | 39.080 | 87 | 51 | 2 | 602 | 687 | 271 | 356 | 4.20e-12 | 68.9 |
MS.gene074321.t1 | AT5G67480 | 39.080 | 87 | 51 | 2 | 602 | 687 | 271 | 356 | 4.20e-12 | 68.9 |
MS.gene074321.t1 | AT5G67480 | 39.080 | 87 | 51 | 2 | 602 | 687 | 282 | 367 | 4.32e-12 | 68.9 |
Find 101 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTGAGTCTTTGCAATTTC+TGG | 0.045626 | 6.2:-12659978 | None:intergenic |
TACTAATATGTTCTTCTATT+TGG | 0.118199 | 6.2:-12656796 | None:intergenic |
AGACTGGATTGTTTGAAAAT+AGG | 0.198076 | 6.2:+12659480 | MS.gene074321:CDS |
GAAAGTGAATAAGCAGTTTC+TGG | 0.202627 | 6.2:+12657941 | MS.gene074321:CDS |
TTGATTCCGTCAAGTATTTC+AGG | 0.217147 | 6.2:+12658211 | MS.gene074321:CDS |
CACTGAATGCAAGAAATTTC+AGG | 0.225944 | 6.2:+12659161 | MS.gene074321:CDS |
GACTGGATTGTTTGAAAATA+GGG | 0.251546 | 6.2:+12659481 | MS.gene074321:CDS |
ATCAAGGTAACGGCAACTTT+TGG | 0.251828 | 6.2:-12656755 | None:intergenic |
TGCCGTGAAGTGATAGTTTC+TGG | 0.256762 | 6.2:+12659123 | MS.gene074321:CDS |
GCACCAAAGTTAGCAGCTTT+TGG | 0.260444 | 6.2:-12657648 | None:intergenic |
AGCTCGAATTTCACACTTAC+TGG | 0.290061 | 6.2:-12659903 | None:intergenic |
TTGCATCACCAGTATGTCTT+TGG | 0.314513 | 6.2:-12658940 | None:intergenic |
GTTGCGAAGACCCTCGAAAA+AGG | 0.318441 | 6.2:+12658840 | MS.gene074321:CDS |
GGAATGTATGTCCAGGAGTT+TGG | 0.324631 | 6.2:+12658141 | MS.gene074321:CDS |
CTATAACAAGAAAGCAGATT+TGG | 0.325291 | 6.2:+12657560 | MS.gene074321:CDS |
CTTCGTTTACCATGAGATAT+TGG | 0.325834 | 6.2:+12658272 | MS.gene074321:CDS |
GTTTCTCAACTTGCTACATA+TGG | 0.342725 | 6.2:+12658431 | MS.gene074321:CDS |
AAGTGTGTTCTTCAGAACTA+TGG | 0.361251 | 6.2:-12659286 | None:intergenic |
TTGCCGTAGAGCTGAAGTTT+TGG | 0.363294 | 6.2:+12660234 | MS.gene074321:CDS |
CTTCTGTTTCAGAAAATTGA+AGG | 0.379117 | 6.2:+12658099 | MS.gene074321:CDS |
TCACAGCAGGATTGTGTAGA+TGG | 0.382870 | 6.2:-12659589 | None:intergenic |
TCTCGTTTGCCATACTTTGA+TGG | 0.385478 | 6.2:+12658789 | MS.gene074321:CDS |
TGGCGTAGCTTATCTTTCTT+CGG | 0.388075 | 6.2:-12658517 | None:intergenic |
CCTCTTTGCAAGATTTCTCT+TGG | 0.395307 | 6.2:-12657359 | None:intergenic |
AGTATGTCAATCTGAGAATC+AGG | 0.404577 | 6.2:+12659655 | MS.gene074321:CDS |
CACCAGTCTCCATCAAAGTA+TGG | 0.407484 | 6.2:-12658798 | None:intergenic |
CAGCATTACTTGCGCGGCGG+CGG | 0.411023 | 6.2:-12659829 | None:intergenic |
TGATGAAGTAATTGAAGAAC+CGG | 0.418960 | 6.2:+12657387 | MS.gene074321:CDS |
TGATTCTCAGATTGACATAC+TGG | 0.420303 | 6.2:-12659653 | None:intergenic |
TCAGGAGTTAAATGAGGAAA+TGG | 0.421433 | 6.2:+12659673 | MS.gene074321:CDS |
CTGAATTCTCTTATAGATCA+AGG | 0.429818 | 6.2:+12657991 | MS.gene074321:CDS |
GATATCATTACGTTTCGTTT+CGG | 0.446327 | 6.2:-12659450 | None:intergenic |
GTTCCAAAAGCTGCTAACTT+TGG | 0.449417 | 6.2:+12657645 | MS.gene074321:CDS |
AATGATATCGTCCTTGAGAC+TGG | 0.449779 | 6.2:+12659464 | MS.gene074321:CDS |
ATATATACACATCGCTGATT+CGG | 0.450338 | 6.2:-12658180 | None:intergenic |
CAAACTGAAACTGAGACTTC+TGG | 0.452077 | 6.2:-12659523 | None:intergenic |
GGTGAAAATGTCGAAATCAA+TGG | 0.452542 | 6.2:+12657325 | MS.gene074321:intron |
TTCTTGATTTGAGAACAGTT+TGG | 0.456469 | 6.2:-12659866 | None:intergenic |
CAAGCCTTCCAAAGACATAC+TGG | 0.466131 | 6.2:+12658932 | MS.gene074321:CDS |
GTGAAAATGTCGAAATCAAT+GGG | 0.468098 | 6.2:+12657326 | MS.gene074321:CDS |
CGAGGTGCATACACTTTGTC+AGG | 0.471850 | 6.2:+12659319 | MS.gene074321:CDS |
CAGTATGTCTTTGGAAGGCT+TGG | 0.474548 | 6.2:-12658931 | None:intergenic |
TTTAGGCCTGAAATACTTGA+CGG | 0.475542 | 6.2:-12658217 | None:intergenic |
AGCTGCTAACTTTGGTGCTA+AGG | 0.483464 | 6.2:+12657653 | MS.gene074321:CDS |
TTTCTCAACTTGCTACATAT+GGG | 0.487718 | 6.2:+12658432 | MS.gene074321:CDS |
AATGAAGAAAATATTGTCGT+TGG | 0.489418 | 6.2:+12658702 | MS.gene074321:CDS |
GCCGTGAAGTGATAGTTTCT+GGG | 0.489549 | 6.2:+12659124 | MS.gene074321:CDS |
TCTGAGAAACGAATCTGATC+AGG | 0.491907 | 6.2:+12656820 | MS.gene074321:CDS |
ATCAATTCCCGCTTGATCCT+CGG | 0.496701 | 6.2:-12657137 | None:intergenic |
TCCCAGAAACTATCACTTCA+CGG | 0.498199 | 6.2:-12659125 | None:intergenic |
GATCTATAAGAGAATTCAGT+AGG | 0.499651 | 6.2:-12657987 | None:intergenic |
TCAGTAGGGTAATTCTCCGC+TGG | 0.501269 | 6.2:-12657972 | None:intergenic |
TGCCATACTTTGATGGAGAC+TGG | 0.505154 | 6.2:+12658796 | MS.gene074321:CDS |
CACATTCCGAGCCAAACTCC+TGG | 0.518027 | 6.2:-12658152 | None:intergenic |
ATCATTACGTTTCGTTTCGG+AGG | 0.526784 | 6.2:-12659447 | None:intergenic |
AGAAATTTCAGGAGTGTGAA+AGG | 0.528641 | 6.2:+12659172 | MS.gene074321:CDS |
AGTATTTCAGGCCTAAAAGA+AGG | 0.532937 | 6.2:+12658223 | MS.gene074321:CDS |
CAGGAGTTTGGCTCGGAATG+TGG | 0.533156 | 6.2:+12658153 | MS.gene074321:CDS |
AGTGTCAAATAGAACAGTAA+AGG | 0.538963 | 6.2:+12658896 | MS.gene074321:CDS |
AATGTAGAATACCACGCTGC+AGG | 0.540083 | 6.2:+12659999 | MS.gene074321:CDS |
ATCACCAGTATGTCTTTGGA+AGG | 0.545017 | 6.2:-12658936 | None:intergenic |
AATGCAATAAATGCAAAAGA+TGG | 0.545817 | 6.2:+12657517 | MS.gene074321:CDS |
CCAAGAGAAATCTTGCAAAG+AGG | 0.547222 | 6.2:+12657359 | MS.gene074321:CDS |
TGATAGTTTCTGGGAAGCGT+TGG | 0.550391 | 6.2:+12659133 | MS.gene074321:CDS |
GATCATCATAGACGAATACT+TGG | 0.551306 | 6.2:-12659561 | None:intergenic |
CAGGATTGTGTAGATGGTAG+AGG | 0.552589 | 6.2:-12659583 | None:intergenic |
CTTCCAAAACTTCAGCTCTA+CGG | 0.553582 | 6.2:-12660237 | None:intergenic |
CAGTAGGGTAATTCTCCGCT+GGG | 0.554187 | 6.2:-12657971 | None:intergenic |
TTTAACACAGATTACTTCCG+AGG | 0.566618 | 6.2:+12657120 | MS.gene074321:intron |
ACGTCTGAACGAATCAATCA+AGG | 0.571106 | 6.2:-12656771 | None:intergenic |
TTTCAAACAATCCAGTCTCA+AGG | 0.571645 | 6.2:-12659475 | None:intergenic |
TGAATTCTCTTATAGATCAA+GGG | 0.573900 | 6.2:+12657992 | MS.gene074321:CDS |
CCTAAAAGAAGGACAAAGAG+TGG | 0.582381 | 6.2:+12658234 | MS.gene074321:CDS |
GAAGAACACACTTTAATGAA+CGG | 0.587580 | 6.2:+12659296 | MS.gene074321:CDS |
TCATTACGTTTCGTTTCGGA+GGG | 0.591001 | 6.2:-12659446 | None:intergenic |
GAACAGTTTGGATGAGAGCA+AGG | 0.592315 | 6.2:-12659854 | None:intergenic |
CTGGTGGTGCGGTAATGCTA+TGG | 0.593172 | 6.2:+12658815 | MS.gene074321:CDS |
CAAACGAGAAACTGTCACCT+TGG | 0.598098 | 6.2:-12658775 | None:intergenic |
GAACGAATCAATCAAGGTAA+CGG | 0.599152 | 6.2:-12656765 | None:intergenic |
TGAGAATCAGGAGTTAAATG+AGG | 0.606219 | 6.2:+12659667 | MS.gene074321:CDS |
ATTACTTCCGAGGATCAAGC+GGG | 0.613684 | 6.2:+12657130 | MS.gene074321:CDS |
GTATGTCCAGGAGTTTGGCT+CGG | 0.620509 | 6.2:+12658146 | MS.gene074321:CDS |
AGAAAGATAAGCTACGCCAC+TGG | 0.623293 | 6.2:+12658521 | MS.gene074321:CDS |
CATGGTAAACGAAGGTACGA+AGG | 0.628852 | 6.2:-12658263 | None:intergenic |
GATTACTTCCGAGGATCAAG+CGG | 0.630451 | 6.2:+12657129 | MS.gene074321:intron |
ATCTATAAGAGAATTCAGTA+GGG | 0.634140 | 6.2:-12657986 | None:intergenic |
ATGGTAAACGAAGGTACGAA+GGG | 0.635264 | 6.2:-12658262 | None:intergenic |
AAATAGAACAGTAAAGGACA+TGG | 0.650828 | 6.2:+12658902 | MS.gene074321:CDS |
AATAGAACAGTAAAGGACAT+GGG | 0.660656 | 6.2:+12658903 | MS.gene074321:CDS |
CATTACGTTTCGTTTCGGAG+GGG | 0.663900 | 6.2:-12659445 | None:intergenic |
AAGGCTCAGCATTACTTGCG+CGG | 0.665538 | 6.2:-12659835 | None:intergenic |
CAATATCTCATGGTAAACGA+AGG | 0.666016 | 6.2:-12658271 | None:intergenic |
TGTGAAATTCGAGCTAATCG+AGG | 0.677098 | 6.2:+12659911 | MS.gene074321:CDS |
AAAGAAATGATCATACACGT+TGG | 0.679280 | 6.2:-12658730 | None:intergenic |
CATACTTTGATGGAGACTGG+TGG | 0.703400 | 6.2:+12658799 | MS.gene074321:CDS |
TTTGATGGAGACTGGTGGTG+CGG | 0.706712 | 6.2:+12658804 | MS.gene074321:CDS |
GCTCAGCATTACTTGCGCGG+CGG | 0.715329 | 6.2:-12659832 | None:intergenic |
ATTGTAACACACCTGCAGCG+TGG | 0.738381 | 6.2:-12660010 | None:intergenic |
GTTTCTGGACATCATCCCAG+CGG | 0.745679 | 6.2:+12657956 | MS.gene074321:CDS |
ACACACTTTAATGAACGGCG+AGG | 0.748870 | 6.2:+12659301 | MS.gene074321:CDS |
AATATCGCAAGTGAGCTACG+AGG | 0.789451 | 6.2:-12659089 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTCAGAAAAAAATAAAAAT+TGG | - | chr6.2:12656985-12657004 | None:intergenic | 10.0% |
!! | AAAATTATATGAAAAACTTC+AGG | - | chr6.2:12659357-12659376 | None:intergenic | 15.0% |
!! | TAATTGATATTAAAACTTAC+CGG | - | chr6.2:12657409-12657428 | None:intergenic | 15.0% |
!! | TTTATATTATTTATTTGTGC+AGG | + | chr6.2:12658655-12658674 | MS.gene074321:intron | 15.0% |
!!! | TATTTTCAATTTCTTTTAAG+CGG | - | chr6.2:12657617-12657636 | None:intergenic | 15.0% |
!!! | TATTTTTTTGAAGAAACAAT+TGG | - | chr6.2:12658037-12658056 | None:intergenic | 15.0% |
!!! | TTATTTTCGTAATTTTGATT+AGG | + | chr6.2:12659032-12659051 | MS.gene074321:intron | 15.0% |
!! | ATACAATACATTTGAGAATT+TGG | + | chr6.2:12658601-12658620 | MS.gene074321:intron | 20.0% |
!! | ATAGAATATCCAAATTCTTT+AGG | - | chr6.2:12660052-12660071 | None:intergenic | 20.0% |
!! | TAAACAAAGATGATAAAAGA+AGG | - | chr6.2:12658639-12658658 | None:intergenic | 20.0% |
!! | TACAATACATTTGAGAATTT+GGG | + | chr6.2:12658602-12658621 | MS.gene074321:intron | 20.0% |
!! | TACTAATATGTTCTTCTATT+TGG | - | chr6.2:12656799-12656818 | None:intergenic | 20.0% |
!! | TATGCATATATGTATATTTC+AGG | - | chr6.2:12657050-12657069 | None:intergenic | 20.0% |
!!! | AGTCAATAATTTTAATAGCA+TGG | - | chr6.2:12657829-12657848 | None:intergenic | 20.0% |
!!! | ATATAATCATCACCTTTTTT+TGG | - | chr6.2:12658466-12658485 | None:intergenic | 20.0% |
!!! | GTTCATTTTATTAGTTCTAT+TGG | - | chr6.2:12658326-12658345 | None:intergenic | 20.0% |
!!! | TGCTATTAAAATTATTGACT+TGG | + | chr6.2:12657829-12657848 | MS.gene074321:intron | 20.0% |
! | AAAAATTACTCTGTTGTGAA+AGG | - | chr6.2:12660120-12660139 | None:intergenic | 25.0% |
! | AATGAAGAAAATATTGTCGT+TGG | + | chr6.2:12658702-12658721 | MS.gene074321:CDS | 25.0% |
! | AATGCAATAAATGCAAAAGA+TGG | + | chr6.2:12657517-12657536 | MS.gene074321:CDS | 25.0% |
! | AGAAAAATACCAATATCTCA+TGG | - | chr6.2:12658284-12658303 | None:intergenic | 25.0% |
! | AGGTAATTGAAATTACTAGA+AGG | - | chr6.2:12656857-12656876 | None:intergenic | 25.0% |
! | AGTTTCATATATAACATCCA+AGG | - | chr6.2:12656900-12656919 | None:intergenic | 25.0% |
! | ATCTATAAGAGAATTCAGTA+GGG | - | chr6.2:12657989-12658008 | None:intergenic | 25.0% |
! | ATTAATATCTAAACCGATCA+AGG | - | chr6.2:12656877-12656896 | None:intergenic | 25.0% |
! | CACAACATAAACAAAAAAGT+GGG | - | chr6.2:12657213-12657232 | None:intergenic | 25.0% |
! | CATGAAAATTCTCAATGTAT+TGG | - | chr6.2:12658572-12658591 | None:intergenic | 25.0% |
! | GTAATTTCAATTACCTTGAT+CGG | + | chr6.2:12656861-12656880 | MS.gene074321:intron | 25.0% |
! | GTATCTTTCAATGCTAAAAA+AGG | + | chr6.2:12658677-12658696 | MS.gene074321:CDS | 25.0% |
! | TAATTGAAATTACTAGAAGG+TGG | - | chr6.2:12656854-12656873 | None:intergenic | 25.0% |
! | TCTTCAAAAAAATATGTCTC+AGG | + | chr6.2:12658043-12658062 | MS.gene074321:intron | 25.0% |
! | TGAATTCTCTTATAGATCAA+GGG | + | chr6.2:12657992-12658011 | MS.gene074321:CDS | 25.0% |
!! | ACCATATCTTTTTACAATGA+TGG | - | chr6.2:12659940-12659959 | None:intergenic | 25.0% |
!! | ATATGAAAAACTTCAGGTTT+AGG | - | chr6.2:12659351-12659370 | None:intergenic | 25.0% |
!! | ATCTTGATTTTTGTAAGGAA+AGG | + | chr6.2:12658407-12658426 | MS.gene074321:CDS | 25.0% |
!! | CTTTTGTAGGCAATATATTT+TGG | - | chr6.2:12659062-12659081 | None:intergenic | 25.0% |
!! | TCTTGATTTTTGTAAGGAAA+GGG | + | chr6.2:12658408-12658427 | MS.gene074321:CDS | 25.0% |
!! | TGGATATCTTGATTTTTGTA+AGG | + | chr6.2:12658402-12658421 | MS.gene074321:CDS | 25.0% |
!! | TTTTGCAAGAAATTACGTAA+TGG | - | chr6.2:12659384-12659403 | None:intergenic | 25.0% |
!!! | TTCACAACAGAGTAATTTTT+TGG | + | chr6.2:12660120-12660139 | MS.gene074321:intron | 25.0% |
!!! | TTTCGTAATTTTGATTAGGT+TGG | + | chr6.2:12659036-12659055 | MS.gene074321:intron | 25.0% |
AAAAAACTGGGAAAAAGATG+AGG | + | chr6.2:12657743-12657762 | MS.gene074321:CDS | 30.0% | |
AAAGAAATGATCATACACGT+TGG | - | chr6.2:12658733-12658752 | None:intergenic | 30.0% | |
AAATAGAACAGTAAAGGACA+TGG | + | chr6.2:12658902-12658921 | MS.gene074321:CDS | 30.0% | |
AATAGAACAGTAAAGGACAT+GGG | + | chr6.2:12658903-12658922 | MS.gene074321:CDS | 30.0% | |
AGACTGGATTGTTTGAAAAT+AGG | + | chr6.2:12659480-12659499 | MS.gene074321:CDS | 30.0% | |
AGTGTCAAATAGAACAGTAA+AGG | + | chr6.2:12658896-12658915 | MS.gene074321:CDS | 30.0% | |
CATTTACTCGTGCATAAAAA+AGG | - | chr6.2:12658978-12658997 | None:intergenic | 30.0% | |
CCACAACATAAACAAAAAAG+TGG | - | chr6.2:12657214-12657233 | None:intergenic | 30.0% | |
CTATAACAAGAAAGCAGATT+TGG | + | chr6.2:12657560-12657579 | MS.gene074321:CDS | 30.0% | |
CTGAATTCTCTTATAGATCA+AGG | + | chr6.2:12657991-12658010 | MS.gene074321:CDS | 30.0% | |
CTTCTGTTTCAGAAAATTGA+AGG | + | chr6.2:12658099-12658118 | MS.gene074321:CDS | 30.0% | |
GAAGAACACACTTTAATGAA+CGG | + | chr6.2:12659296-12659315 | MS.gene074321:CDS | 30.0% | |
GAATATCCAAATTCTTTAGG+TGG | - | chr6.2:12660049-12660068 | None:intergenic | 30.0% | |
GACTGGATTGTTTGAAAATA+GGG | + | chr6.2:12659481-12659500 | MS.gene074321:CDS | 30.0% | |
GATATCATTACGTTTCGTTT+CGG | - | chr6.2:12659453-12659472 | None:intergenic | 30.0% | |
GATCTATAAGAGAATTCAGT+AGG | - | chr6.2:12657990-12658009 | None:intergenic | 30.0% | |
GCCATCATTGTAAAAAGATA+TGG | + | chr6.2:12659936-12659955 | MS.gene074321:CDS | 30.0% | |
GTGAAAATGTCGAAATCAAT+GGG | + | chr6.2:12657326-12657345 | MS.gene074321:CDS | 30.0% | |
TACTGAAAAATGGAAATCCA+AGG | + | chr6.2:12658758-12658777 | MS.gene074321:CDS | 30.0% | |
TCGGTTTAGATATTAATCCT+TGG | + | chr6.2:12656880-12656899 | MS.gene074321:intron | 30.0% | |
TCTTTGTTCCTACTGAAAAA+TGG | + | chr6.2:12658748-12658767 | MS.gene074321:CDS | 30.0% | |
TGATGAAGTAATTGAAGAAC+CGG | + | chr6.2:12657387-12657406 | MS.gene074321:CDS | 30.0% | |
TTTCTTGCTTATCATCAGAT+TGG | + | chr6.2:12658382-12658401 | MS.gene074321:intron | 30.0% | |
! | AAAAGCATAAGCAGAAAGAA+TGG | - | chr6.2:12658360-12658379 | None:intergenic | 30.0% |
! | AAAGTCTTTCCCTTTTACAT+AGG | - | chr6.2:12657177-12657196 | None:intergenic | 30.0% |
! | ATATATACACATCGCTGATT+CGG | - | chr6.2:12658183-12658202 | None:intergenic | 30.0% |
! | ATTTCTTTTAAGCGGCATAA+AGG | - | chr6.2:12657609-12657628 | None:intergenic | 30.0% |
! | CTTGATTTTTGTAAGGAAAG+GGG | + | chr6.2:12658409-12658428 | MS.gene074321:CDS | 30.0% |
! | GGCATTGAATGAAATAACAA+GGG | + | chr6.2:12659227-12659246 | MS.gene074321:intron | 30.0% |
! | TGAAAAGTCTTTTCTCTAAG+TGG | - | chr6.2:12657704-12657723 | None:intergenic | 30.0% |
! | TGGCATTGAATGAAATAACA+AGG | + | chr6.2:12659226-12659245 | MS.gene074321:intron | 30.0% |
! | TTCTTGATTTGAGAACAGTT+TGG | - | chr6.2:12659869-12659888 | None:intergenic | 30.0% |
!! | GAATGCATCTTTGAAATGTT+TGG | + | chr6.2:12659206-12659225 | MS.gene074321:intron | 30.0% |
!! | TTGGATTTCCATTTTTCAGT+AGG | - | chr6.2:12658759-12658778 | None:intergenic | 30.0% |
!! | TTTCTCAACTTGCTACATAT+GGG | + | chr6.2:12658432-12658451 | MS.gene074321:CDS | 30.0% |
!!! | CCACTTTTTTGTTTATGTTG+TGG | + | chr6.2:12657211-12657230 | MS.gene074321:intron | 30.0% |
!!! | TAATCATCACCTTTTTTTGG+AGG | - | chr6.2:12658463-12658482 | None:intergenic | 30.0% |
!!! | TTGAATTATGTGCCATTTTC+AGG | + | chr6.2:12659406-12659425 | MS.gene074321:intron | 30.0% |
AAGTGTGTTCTTCAGAACTA+TGG | - | chr6.2:12659289-12659308 | None:intergenic | 35.0% | |
ACACTTGCAACCTATGTAAA+AGG | + | chr6.2:12657164-12657183 | MS.gene074321:intron | 35.0% | |
AGTATGTCAATCTGAGAATC+AGG | + | chr6.2:12659655-12659674 | MS.gene074321:CDS | 35.0% | |
AGTATTTCAGGCCTAAAAGA+AGG | + | chr6.2:12658223-12658242 | MS.gene074321:CDS | 35.0% | |
CAATATCTCATGGTAAACGA+AGG | - | chr6.2:12658274-12658293 | None:intergenic | 35.0% | |
CACTGAATGCAAGAAATTTC+AGG | + | chr6.2:12659161-12659180 | MS.gene074321:CDS | 35.0% | |
CACTTGCAACCTATGTAAAA+GGG | + | chr6.2:12657165-12657184 | MS.gene074321:intron | 35.0% | |
CATGCAAGAGAGAAAAAACT+GGG | + | chr6.2:12657731-12657750 | MS.gene074321:CDS | 35.0% | |
CTCAATGTATTGGACACATA+AGG | - | chr6.2:12658562-12658581 | None:intergenic | 35.0% | |
CTTCGTTTACCATGAGATAT+TGG | + | chr6.2:12658272-12658291 | MS.gene074321:CDS | 35.0% | |
GAAAGTGAATAAGCAGTTTC+TGG | + | chr6.2:12657941-12657960 | MS.gene074321:CDS | 35.0% | |
GAACGAATCAATCAAGGTAA+CGG | - | chr6.2:12656768-12656787 | None:intergenic | 35.0% | |
GAAGTATAACCTGAAACCAA+GGG | - | chr6.2:12658083-12658102 | None:intergenic | 35.0% | |
GAAGTTTATGTGCATACATG+CGG | - | chr6.2:12657783-12657802 | None:intergenic | 35.0% | |
GATCATCATAGACGAATACT+TGG | - | chr6.2:12659564-12659583 | None:intergenic | 35.0% | |
GGATTTAATAGAAGTTCCCT+TGG | + | chr6.2:12658064-12658083 | MS.gene074321:intron | 35.0% | |
GGTGAAAATGTCGAAATCAA+TGG | + | chr6.2:12657325-12657344 | MS.gene074321:intron | 35.0% | |
TACTCGTGCATAAAAAAGGA+TGG | - | chr6.2:12658974-12658993 | None:intergenic | 35.0% | |
TATCCAAATTCTTTAGGTGG+TGG | - | chr6.2:12660046-12660065 | None:intergenic | 35.0% | |
TCAGGAGTTAAATGAGGAAA+TGG | + | chr6.2:12659673-12659692 | MS.gene074321:CDS | 35.0% | |
TCATGCAAGAGAGAAAAAAC+TGG | + | chr6.2:12657730-12657749 | MS.gene074321:CDS | 35.0% | |
TGAGAATCAGGAGTTAAATG+AGG | + | chr6.2:12659667-12659686 | MS.gene074321:CDS | 35.0% | |
TGATTCTCAGATTGACATAC+TGG | - | chr6.2:12659656-12659675 | None:intergenic | 35.0% | |
TTCTGAGTCTTTGCAATTTC+TGG | - | chr6.2:12659981-12660000 | None:intergenic | 35.0% | |
TTGAATCACTGCAAAATTGC+AGG | + | chr6.2:12657863-12657882 | MS.gene074321:intron | 35.0% | |
TTGATTCCGTCAAGTATTTC+AGG | + | chr6.2:12658211-12658230 | MS.gene074321:CDS | 35.0% | |
TTTAACACAGATTACTTCCG+AGG | + | chr6.2:12657120-12657139 | MS.gene074321:intron | 35.0% | |
TTTAGGCCTGAAATACTTGA+CGG | - | chr6.2:12658220-12658239 | None:intergenic | 35.0% | |
TTTCAAACAATCCAGTCTCA+AGG | - | chr6.2:12659478-12659497 | None:intergenic | 35.0% | |
! | ACGAGGAAGTTTTCTTTTGT+AGG | - | chr6.2:12659075-12659094 | None:intergenic | 35.0% |
! | AGAAATTTCAGGAGTGTGAA+AGG | + | chr6.2:12659172-12659191 | MS.gene074321:CDS | 35.0% |
! | AGAAGTATAACCTGAAACCA+AGG | - | chr6.2:12658084-12658103 | None:intergenic | 35.0% |
! | GAGTGTTACAAGACTTTTAC+AGG | + | chr6.2:12657304-12657323 | MS.gene074321:intron | 35.0% |
! | GGAGTAGATGTATGCATTTT+TGG | + | chr6.2:12658120-12658139 | MS.gene074321:CDS | 35.0% |
! | TGCAATTTTGCAGTGATTCA+AGG | - | chr6.2:12657864-12657883 | None:intergenic | 35.0% |
! | TGGCATCTGAAATATGTGAA+TGG | - | chr6.2:12659269-12659288 | None:intergenic | 35.0% |
!! | AGAAGAAGAATTTGTTGCAC+AGG | + | chr6.2:12657267-12657286 | MS.gene074321:intron | 35.0% |
!! | CTTACTGACTTACATACAGA+TGG | + | chr6.2:12659769-12659788 | MS.gene074321:intron | 35.0% |
!! | GAAGAAGAATTTGTTGCACA+GGG | + | chr6.2:12657268-12657287 | MS.gene074321:intron | 35.0% |
!! | GTTTCTCAACTTGCTACATA+TGG | + | chr6.2:12658431-12658450 | MS.gene074321:CDS | 35.0% |
!!! | CATTTTTGGAATGTATGTCC+AGG | + | chr6.2:12658134-12658153 | MS.gene074321:CDS | 35.0% |
!!! | TTGAGCACTTTTGAGTTAAC+TGG | - | chr6.2:12659631-12659650 | None:intergenic | 35.0% |
AATGATATCGTCCTTGAGAC+TGG | + | chr6.2:12659464-12659483 | MS.gene074321:CDS | 40.0% | |
ACGTCTGAACGAATCAATCA+AGG | - | chr6.2:12656774-12656793 | None:intergenic | 40.0% | |
AGAAACGAATCTGATCAGGT+TGG | + | chr6.2:12656824-12656843 | MS.gene074321:intron | 40.0% | |
AGCTCGAATTTCACACTTAC+TGG | - | chr6.2:12659906-12659925 | None:intergenic | 40.0% | |
ATAGAAGTTCCCTTGGTTTC+AGG | + | chr6.2:12658071-12658090 | MS.gene074321:intron | 40.0% | |
ATCACCAGTATGTCTTTGGA+AGG | - | chr6.2:12658939-12658958 | None:intergenic | 40.0% | |
ATCATTACGTTTCGTTTCGG+AGG | - | chr6.2:12659450-12659469 | None:intergenic | 40.0% | |
CAAACTGAAACTGAGACTTC+TGG | - | chr6.2:12659526-12659545 | None:intergenic | 40.0% | |
CCAAGAGAAATCTTGCAAAG+AGG | + | chr6.2:12657359-12657378 | MS.gene074321:CDS | 40.0% | |
CCTAAAAGAAGGACAAAGAG+TGG | + | chr6.2:12658234-12658253 | MS.gene074321:CDS | 40.0% | |
CCTCTTTGCAAGATTTCTCT+TGG | - | chr6.2:12657362-12657381 | None:intergenic | 40.0% | |
CTACCACCACCTAAAGAATT+TGG | + | chr6.2:12660040-12660059 | MS.gene074321:intron | 40.0% | |
CTTCCAAAACTTCAGCTCTA+CGG | - | chr6.2:12660240-12660259 | None:intergenic | 40.0% | |
GCATAAGCAGAAAGAATGGA+AGG | - | chr6.2:12658356-12658375 | None:intergenic | 40.0% | |
GTTCCAAAAGCTGCTAACTT+TGG | + | chr6.2:12657645-12657664 | MS.gene074321:CDS | 40.0% | |
TAGATCAAGGGTAAGTTCAG+TGG | + | chr6.2:12658004-12658023 | MS.gene074321:intron | 40.0% | |
TCATTACGTTTCGTTTCGGA+GGG | - | chr6.2:12659449-12659468 | None:intergenic | 40.0% | |
TCCCAGAAACTATCACTTCA+CGG | - | chr6.2:12659128-12659147 | None:intergenic | 40.0% | |
TCTCGTTTGCCATACTTTGA+TGG | + | chr6.2:12658789-12658808 | MS.gene074321:CDS | 40.0% | |
TCTGAGAAACGAATCTGATC+AGG | + | chr6.2:12656820-12656839 | MS.gene074321:CDS | 40.0% | |
TGGCGTAGCTTATCTTTCTT+CGG | - | chr6.2:12658520-12658539 | None:intergenic | 40.0% | |
TGTGAAATTCGAGCTAATCG+AGG | + | chr6.2:12659911-12659930 | MS.gene074321:CDS | 40.0% | |
TTGCATCACCAGTATGTCTT+TGG | - | chr6.2:12658943-12658962 | None:intergenic | 40.0% | |
! | ATGGTAAACGAAGGTACGAA+GGG | - | chr6.2:12658265-12658284 | None:intergenic | 40.0% |
! | CCACTCTTTGTCCTTCTTTT+AGG | - | chr6.2:12658237-12658256 | None:intergenic | 40.0% |
! | TTCGGAGTCTTTTGCTCTTT+GGG | - | chr6.2:12658502-12658521 | None:intergenic | 40.0% |
!! | ATCAAGGTAACGGCAACTTT+TGG | - | chr6.2:12656758-12656777 | None:intergenic | 40.0% |
!! | ATGACTGTTGTTTCGTCTAG+TGG | + | chr6.2:12657490-12657509 | MS.gene074321:intron | 40.0% |
!! | TCAAGGTAACGGCAACTTTT+GGG | - | chr6.2:12656757-12656776 | None:intergenic | 40.0% |
!! | TGACTGTTGTTTCGTCTAGT+GGG | + | chr6.2:12657491-12657510 | MS.gene074321:intron | 40.0% |
!!! | ATCACCTTTTTTTGGAGGAC+AGG | - | chr6.2:12658458-12658477 | None:intergenic | 40.0% |
!!! | GAAGTTTTGGAAGCAGTCAT+TGG | + | chr6.2:12660247-12660266 | MS.gene074321:CDS | 40.0% |
!!! | TCATTTTGACTCATCACAGC+AGG | - | chr6.2:12659605-12659624 | None:intergenic | 40.0% |
!!! | TTCTCTACTCCCTTTTTCGA+GGG | - | chr6.2:12658853-12658872 | None:intergenic | 40.0% |
AATATCGCAAGTGAGCTACG+AGG | - | chr6.2:12659092-12659111 | None:intergenic | 45.0% | |
AATGTAGAATACCACGCTGC+AGG | + | chr6.2:12659999-12660018 | MS.gene074321:CDS | 45.0% | |
ACACACTTTAATGAACGGCG+AGG | + | chr6.2:12659301-12659320 | MS.gene074321:CDS | 45.0% | |
AGAAAGATAAGCTACGCCAC+TGG | + | chr6.2:12658521-12658540 | MS.gene074321:CDS | 45.0% | |
ATCAATTCCCGCTTGATCCT+CGG | - | chr6.2:12657140-12657159 | None:intergenic | 45.0% | |
ATTACTTCCGAGGATCAAGC+GGG | + | chr6.2:12657130-12657149 | MS.gene074321:CDS | 45.0% | |
CAAACGAGAAACTGTCACCT+TGG | - | chr6.2:12658778-12658797 | None:intergenic | 45.0% | |
CAAGCCTTCCAAAGACATAC+TGG | + | chr6.2:12658932-12658951 | MS.gene074321:CDS | 45.0% | |
CACCAGTCTCCATCAAAGTA+TGG | - | chr6.2:12658801-12658820 | None:intergenic | 45.0% | |
CAGGATTGTGTAGATGGTAG+AGG | - | chr6.2:12659586-12659605 | None:intergenic | 45.0% | |
CATACTTTGATGGAGACTGG+TGG | + | chr6.2:12658799-12658818 | MS.gene074321:CDS | 45.0% | |
CATCAACAGCAGCCTGAAAA+TGG | - | chr6.2:12659421-12659440 | None:intergenic | 45.0% | |
CATTACGTTTCGTTTCGGAG+GGG | - | chr6.2:12659448-12659467 | None:intergenic | 45.0% | |
GAACAGTTTGGATGAGAGCA+AGG | - | chr6.2:12659857-12659876 | None:intergenic | 45.0% | |
GAGAAAGTAAGACTGACCAG+TGG | - | chr6.2:12658540-12658559 | None:intergenic | 45.0% | |
GATTACTTCCGAGGATCAAG+CGG | + | chr6.2:12657129-12657148 | MS.gene074321:intron | 45.0% | |
GCCGTGAAGTGATAGTTTCT+GGG | + | chr6.2:12659124-12659143 | MS.gene074321:CDS | 45.0% | |
GGAATGTATGTCCAGGAGTT+TGG | + | chr6.2:12658141-12658160 | MS.gene074321:CDS | 45.0% | |
TCACAGCAGGATTGTGTAGA+TGG | - | chr6.2:12659592-12659611 | None:intergenic | 45.0% | |
TGCCATACTTTGATGGAGAC+TGG | + | chr6.2:12658796-12658815 | MS.gene074321:CDS | 45.0% | |
TGCCGTGAAGTGATAGTTTC+TGG | + | chr6.2:12659123-12659142 | MS.gene074321:CDS | 45.0% | |
TTGCGAAGACCCTCGAAAAA+GGG | + | chr6.2:12658841-12658860 | MS.gene074321:CDS | 45.0% | |
! | CAGTATGTCTTTGGAAGGCT+TGG | - | chr6.2:12658934-12658953 | None:intergenic | 45.0% |
! | CATGGTAAACGAAGGTACGA+AGG | - | chr6.2:12658266-12658285 | None:intergenic | 45.0% |
! | CTTCGGAGTCTTTTGCTCTT+TGG | - | chr6.2:12658503-12658522 | None:intergenic | 45.0% |
! | GCACCAAAGTTAGCAGCTTT+TGG | - | chr6.2:12657651-12657670 | None:intergenic | 45.0% |
! | TGATAGTTTCTGGGAAGCGT+TGG | + | chr6.2:12659133-12659152 | MS.gene074321:CDS | 45.0% |
! | TTGCCGTAGAGCTGAAGTTT+TGG | + | chr6.2:12660234-12660253 | MS.gene074321:CDS | 45.0% |
!! | AAGGTAACGGCAACTTTTGG+GGG | - | chr6.2:12656755-12656774 | None:intergenic | 45.0% |
!! | AGCTGCTAACTTTGGTGCTA+AGG | + | chr6.2:12657653-12657672 | MS.gene074321:CDS | 45.0% |
!! | CAAGGTAACGGCAACTTTTG+GGG | - | chr6.2:12656756-12656775 | None:intergenic | 45.0% |
!! | CTTCTCTACTCCCTTTTTCG+AGG | - | chr6.2:12658854-12658873 | None:intergenic | 45.0% |
!! | GAGTCTTTTGCTCTTTGGGA+TGG | - | chr6.2:12658498-12658517 | None:intergenic | 45.0% |
AAGGCTCAGCATTACTTGCG+CGG | - | chr6.2:12659838-12659857 | None:intergenic | 50.0% | |
ATTGTAACACACCTGCAGCG+TGG | - | chr6.2:12660013-12660032 | None:intergenic | 50.0% | |
CAGTAGGGTAATTCTCCGCT+GGG | - | chr6.2:12657974-12657993 | None:intergenic | 50.0% | |
CGAGGTGCATACACTTTGTC+AGG | + | chr6.2:12659319-12659338 | MS.gene074321:CDS | 50.0% | |
GTATGTCCAGGAGTTTGGCT+CGG | + | chr6.2:12658146-12658165 | MS.gene074321:CDS | 50.0% | |
GTGCATACATGCGGAGTTCT+CGG | - | chr6.2:12657774-12657793 | None:intergenic | 50.0% | |
GTTGCGAAGACCCTCGAAAA+AGG | + | chr6.2:12658840-12658859 | MS.gene074321:CDS | 50.0% | |
TCAGTAGGGTAATTCTCCGC+TGG | - | chr6.2:12657975-12657994 | None:intergenic | 50.0% | |
TGGGCCTGTCCTCCAAAAAA+AGG | + | chr6.2:12658451-12658470 | MS.gene074321:CDS | 50.0% | |
! | GTTTCTGGACATCATCCCAG+CGG | + | chr6.2:12657956-12657975 | MS.gene074321:CDS | 50.0% |
! | TTTGATGGAGACTGGTGGTG+CGG | + | chr6.2:12658804-12658823 | MS.gene074321:CDS | 50.0% |
CACATTCCGAGCCAAACTCC+TGG | - | chr6.2:12658155-12658174 | None:intergenic | 55.0% | |
! | CTGGTGGTGCGGTAATGCTA+TGG | + | chr6.2:12658815-12658834 | MS.gene074321:CDS | 55.0% |
!! | CAGGAGTTTGGCTCGGAATG+TGG | + | chr6.2:12658153-12658172 | MS.gene074321:CDS | 55.0% |
GCTCAGCATTACTTGCGCGG+CGG | - | chr6.2:12659835-12659854 | None:intergenic | 60.0% | |
CAGCATTACTTGCGCGGCGG+CGG | - | chr6.2:12659832-12659851 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 12656710 | 12660276 | 12656710 | ID=MS.gene074321 |
chr6.2 | mRNA | 12656710 | 12660276 | 12656710 | ID=MS.gene074321.t1;Parent=MS.gene074321 |
chr6.2 | exon | 12656710 | 12656841 | 12656710 | ID=MS.gene074321.t1.exon1;Parent=MS.gene074321.t1 |
chr6.2 | CDS | 12656710 | 12656841 | 12656710 | ID=cds.MS.gene074321.t1;Parent=MS.gene074321.t1 |
chr6.2 | exon | 12657130 | 12657178 | 12657130 | ID=MS.gene074321.t1.exon2;Parent=MS.gene074321.t1 |
chr6.2 | CDS | 12657130 | 12657178 | 12657130 | ID=cds.MS.gene074321.t1;Parent=MS.gene074321.t1 |
chr6.2 | exon | 12657326 | 12657408 | 12657326 | ID=MS.gene074321.t1.exon3;Parent=MS.gene074321.t1 |
chr6.2 | CDS | 12657326 | 12657408 | 12657326 | ID=cds.MS.gene074321.t1;Parent=MS.gene074321.t1 |
chr6.2 | exon | 12657510 | 12657764 | 12657510 | ID=MS.gene074321.t1.exon4;Parent=MS.gene074321.t1 |
chr6.2 | CDS | 12657510 | 12657764 | 12657510 | ID=cds.MS.gene074321.t1;Parent=MS.gene074321.t1 |
chr6.2 | exon | 12657885 | 12658013 | 12657885 | ID=MS.gene074321.t1.exon5;Parent=MS.gene074321.t1 |
chr6.2 | CDS | 12657885 | 12658013 | 12657885 | ID=cds.MS.gene074321.t1;Parent=MS.gene074321.t1 |
chr6.2 | exon | 12658093 | 12658293 | 12658093 | ID=MS.gene074321.t1.exon6;Parent=MS.gene074321.t1 |
chr6.2 | CDS | 12658093 | 12658293 | 12658093 | ID=cds.MS.gene074321.t1;Parent=MS.gene074321.t1 |
chr6.2 | exon | 12658400 | 12658542 | 12658400 | ID=MS.gene074321.t1.exon7;Parent=MS.gene074321.t1 |
chr6.2 | CDS | 12658400 | 12658542 | 12658400 | ID=cds.MS.gene074321.t1;Parent=MS.gene074321.t1 |
chr6.2 | exon | 12658677 | 12658965 | 12658677 | ID=MS.gene074321.t1.exon8;Parent=MS.gene074321.t1 |
chr6.2 | CDS | 12658677 | 12658965 | 12658677 | ID=cds.MS.gene074321.t1;Parent=MS.gene074321.t1 |
chr6.2 | exon | 12659054 | 12659193 | 12659054 | ID=MS.gene074321.t1.exon9;Parent=MS.gene074321.t1 |
chr6.2 | CDS | 12659054 | 12659193 | 12659054 | ID=cds.MS.gene074321.t1;Parent=MS.gene074321.t1 |
chr6.2 | exon | 12659283 | 12659340 | 12659283 | ID=MS.gene074321.t1.exon10;Parent=MS.gene074321.t1 |
chr6.2 | CDS | 12659283 | 12659340 | 12659283 | ID=cds.MS.gene074321.t1;Parent=MS.gene074321.t1 |
chr6.2 | exon | 12659428 | 12659694 | 12659428 | ID=MS.gene074321.t1.exon11;Parent=MS.gene074321.t1 |
chr6.2 | CDS | 12659428 | 12659694 | 12659428 | ID=cds.MS.gene074321.t1;Parent=MS.gene074321.t1 |
chr6.2 | exon | 12659788 | 12660020 | 12659788 | ID=MS.gene074321.t1.exon12;Parent=MS.gene074321.t1 |
chr6.2 | CDS | 12659788 | 12660020 | 12659788 | ID=cds.MS.gene074321.t1;Parent=MS.gene074321.t1 |
chr6.2 | exon | 12660189 | 12660276 | 12660189 | ID=MS.gene074321.t1.exon13;Parent=MS.gene074321.t1 |
chr6.2 | CDS | 12660189 | 12660276 | 12660189 | ID=cds.MS.gene074321.t1;Parent=MS.gene074321.t1 |
Gene Sequence |
Protein sequence |