Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074407.t1 | XP_013461072.1 | 94.7 | 547 | 16 | 4 | 1 | 544 | 9 | 545 | 1.40E-297 | 1031.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074407.t1 | O24606 | 62.5 | 550 | 178 | 9 | 1 | 544 | 6 | 533 | 2.4e-186 | 653.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074407.t1 | D0EXG5 | 94.7 | 547 | 16 | 4 | 1 | 544 | 9 | 545 | 9.7e-298 | 1031.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene074407.t1 | TF | EIL |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074407.t1 | MTR_3g078770 | 94.698 | 547 | 16 | 4 | 1 | 544 | 9 | 545 | 0.0 | 1060 |
| MS.gene074407.t1 | MTR_5g087790 | 72.578 | 547 | 137 | 10 | 1 | 540 | 7 | 547 | 0.0 | 792 |
| MS.gene074407.t1 | MTR_2g098470 | 63.399 | 306 | 98 | 4 | 33 | 326 | 27 | 330 | 6.52e-131 | 395 |
| MS.gene074407.t1 | MTR_3g087530 | 63.953 | 258 | 82 | 4 | 41 | 293 | 29 | 280 | 2.25e-113 | 343 |
| MS.gene074407.t1 | MTR_6g060600 | 38.370 | 503 | 264 | 9 | 18 | 512 | 17 | 481 | 1.11e-111 | 347 |
| MS.gene074407.t1 | MTR_6g460640 | 51.667 | 300 | 134 | 4 | 32 | 326 | 31 | 324 | 1.68e-108 | 338 |
| MS.gene074407.t1 | MTR_8g091370 | 60.232 | 259 | 97 | 3 | 38 | 293 | 16 | 271 | 8.20e-107 | 327 |
| MS.gene074407.t1 | MTR_3g010790 | 52.000 | 250 | 116 | 2 | 98 | 343 | 1 | 250 | 5.49e-90 | 285 |
| MS.gene074407.t1 | MTR_1g024420 | 44.660 | 103 | 55 | 1 | 40 | 140 | 6 | 108 | 6.98e-27 | 105 |
| MS.gene074407.t1 | MTR_7g095580 | 43.269 | 104 | 47 | 3 | 87 | 181 | 1 | 101 | 8.36e-19 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074407.t1 | AT3G20770 | 62.956 | 548 | 175 | 10 | 1 | 542 | 6 | 531 | 0.0 | 668 |
| MS.gene074407.t1 | AT2G27050 | 60.323 | 557 | 165 | 15 | 1 | 536 | 7 | 528 | 0.0 | 622 |
| MS.gene074407.t1 | AT1G73730 | 62.541 | 307 | 93 | 6 | 35 | 326 | 17 | 316 | 1.98e-127 | 384 |
| MS.gene074407.t1 | AT1G73730 | 62.541 | 307 | 93 | 6 | 35 | 326 | 29 | 328 | 2.09e-127 | 384 |
| MS.gene074407.t1 | AT5G21120 | 47.260 | 438 | 177 | 12 | 9 | 428 | 15 | 416 | 1.42e-119 | 362 |
| MS.gene074407.t1 | AT5G21120 | 47.260 | 438 | 177 | 12 | 9 | 428 | 15 | 416 | 1.42e-119 | 362 |
| MS.gene074407.t1 | AT5G21120 | 47.260 | 438 | 177 | 12 | 9 | 428 | 22 | 423 | 1.76e-119 | 362 |
| MS.gene074407.t1 | AT5G65100 | 44.208 | 423 | 191 | 11 | 39 | 424 | 33 | 447 | 1.43e-106 | 330 |
| MS.gene074407.t1 | AT5G10120 | 57.634 | 262 | 108 | 1 | 35 | 293 | 14 | 275 | 1.39e-104 | 322 |
Find 187 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTACAAGCTTGCGAATTT+TGG | 0.116142 | 3.4:-75305134 | None:intergenic |
| GGCTCTTCTTCATCTGATTT+TGG | 0.161207 | 3.4:+75305634 | MS.gene074407:CDS |
| ATCTTTCGGTAAACCGATTT+GGG | 0.200055 | 3.4:-75305014 | None:intergenic |
| CCAAGCTGACAATGCAATTC+CGG | 0.279173 | 3.4:+75304808 | MS.gene074407:CDS |
| GATCTTTCGGTAAACCGATT+TGG | 0.301097 | 3.4:-75305015 | None:intergenic |
| CCGATGTGAGCTTGGCTATA+AGG | 0.303939 | 3.4:-75305559 | None:intergenic |
| AATGGCTCAGCCGGTTAATA+TGG | 0.309330 | 3.4:+75305726 | MS.gene074407:CDS |
| GGTCACAGGCTTTCCTTTCT+CGG | 0.320948 | 3.4:-75304705 | None:intergenic |
| ACCGGCTGAGCCATTGGTTT+CGG | 0.323642 | 3.4:-75305718 | None:intergenic |
| GGTGCTTCTCAAGCGATTAA+AGG | 0.326570 | 3.4:+75304520 | MS.gene074407:CDS |
| GTCAGCTTGGTACTTGGATA+TGG | 0.327342 | 3.4:-75304795 | None:intergenic |
| CGTTCCTCCACATCAAAATT+CGG | 0.328270 | 3.4:-75305340 | None:intergenic |
| AGGCTCAAGGGTTTGTTTAC+GGG | 0.333360 | 3.4:+75304675 | MS.gene074407:CDS |
| CCAAAATTCGCAAGCTTGTA+AGG | 0.334057 | 3.4:+75305134 | MS.gene074407:CDS |
| AAGGCTCAAGGGTTTGTTTA+CGG | 0.347915 | 3.4:+75304674 | MS.gene074407:CDS |
| GGCGGAGGACCTTGATCTTT+CGG | 0.355023 | 3.4:-75305028 | None:intergenic |
| CCTCCTCCATGGTGGCCTAC+AGG | 0.364645 | 3.4:+75304974 | MS.gene074407:CDS |
| GATGAAGAAGAGCCTCTATA+TGG | 0.374646 | 3.4:-75305625 | None:intergenic |
| AAAGGTCCAGCTGCGACAAA+TGG | 0.377442 | 3.4:-75305268 | None:intergenic |
| TTGATTGACGATTGCAAGCC+AGG | 0.380797 | 3.4:-75305203 | None:intergenic |
| GTCACAGGCTTTCCTTTCTC+GGG | 0.386577 | 3.4:-75304704 | None:intergenic |
| TTCTTCATCAATCCAACATT+GGG | 0.399620 | 3.4:+75305377 | MS.gene074407:CDS |
| GAGGAGGATGTGGAGGGATA+AGG | 0.401050 | 3.4:+75304499 | MS.gene074407:CDS |
| TGCATTGTCAGCTTGGTACT+TGG | 0.401725 | 3.4:-75304801 | None:intergenic |
| CCACCTTCCATCGATATAAC+TGG | 0.402818 | 3.4:+75305751 | MS.gene074407:CDS |
| AGATCATGAGGTTTCTTGTA+AGG | 0.405253 | 3.4:-75305049 | None:intergenic |
| ATTGCGAAAGTCTGCTGAAA+TGG | 0.405530 | 3.4:-75305430 | None:intergenic |
| TTTCCTCCTTGCCTGTTCCT+GGG | 0.410461 | 3.4:-75304591 | None:intergenic |
| CAAGCTGACAATGCAATTCC+GGG | 0.413671 | 3.4:+75304809 | MS.gene074407:CDS |
| AAGGTCCAGCTGCGACAAAT+GGG | 0.416033 | 3.4:-75305267 | None:intergenic |
| TTTGTCGCAGCTGGACCTTT+CGG | 0.419285 | 3.4:+75305271 | MS.gene074407:CDS |
| TTGCCTCTGCTTGGCCGCAT+CGG | 0.422356 | 3.4:-75304567 | None:intergenic |
| TCGCCTCAGGTTCAGTTAGC+CGG | 0.423673 | 3.4:-75304427 | None:intergenic |
| GATTGATGAAGAAGATTCTC+AGG | 0.425025 | 3.4:-75305367 | None:intergenic |
| TCAATCCAACATTGGGATGA+TGG | 0.429901 | 3.4:+75305384 | MS.gene074407:CDS |
| CCGGAATTGCATTGTCAGCT+TGG | 0.430474 | 3.4:-75304808 | None:intergenic |
| GCCGCATCGGATCCTTCCTT+CGG | 0.430698 | 3.4:-75304554 | None:intergenic |
| GATCATGAGATGGCTCTATC+TGG | 0.431769 | 3.4:+75304350 | None:intergenic |
| GGCAACATGAATTTAACTTC+TGG | 0.433244 | 3.4:+75305844 | MS.gene074407:CDS |
| CCCTCAGAGGCGGTTTCCAT+TGG | 0.434105 | 3.4:+75304940 | MS.gene074407:CDS |
| ACCTCATTAGCATGAAAACT+TGG | 0.436185 | 3.4:-75305661 | None:intergenic |
| TTCCTGGGATTGCCTCTGCT+TGG | 0.439634 | 3.4:-75304576 | None:intergenic |
| GCAGCTCTTGCAAGGTGTGA+GGG | 0.439936 | 3.4:-75304865 | None:intergenic |
| CCGCGAATGGTGGAAGGATA+AGG | 0.449952 | 3.4:+75304745 | MS.gene074407:CDS |
| GCAGAGGCAATCCCAGGAAC+AGG | 0.451574 | 3.4:+75304580 | MS.gene074407:CDS |
| CTCCTCCATGGTGGCCTACA+GGG | 0.453443 | 3.4:+75304975 | MS.gene074407:CDS |
| CCTTATCCTTCCACCATTCG+CGG | 0.453482 | 3.4:-75304745 | None:intergenic |
| GTGAGGAAGCGGAAGATCTC+TGG | 0.455579 | 3.4:+75305484 | MS.gene074407:CDS |
| TACGGGATCATTCCCGAGAA+AGG | 0.459725 | 3.4:+75304692 | MS.gene074407:CDS |
| GAAGGTGGAACCATATTAAC+CGG | 0.463028 | 3.4:-75305736 | None:intergenic |
| CTTCTTCATCAATCCAACAT+TGG | 0.463424 | 3.4:+75305376 | MS.gene074407:CDS |
| AGCAGCATGAGAATTACTTC+AGG | 0.465101 | 3.4:+75305923 | MS.gene074407:CDS |
| TCAGCAGACTTTCGCAATGA+AGG | 0.468808 | 3.4:+75305435 | MS.gene074407:CDS |
| TGCAGCTCTTGCAAGGTGTG+AGG | 0.478278 | 3.4:-75304866 | None:intergenic |
| GAGAAAGGAAAGCCTGTGAC+CGG | 0.478282 | 3.4:+75304707 | MS.gene074407:CDS |
| ATATTAACCGGCTGAGCCAT+TGG | 0.478420 | 3.4:-75305724 | None:intergenic |
| GTATCCCTAGAAGCCCTGTC+TGG | 0.478900 | 3.4:-75305586 | None:intergenic |
| GTCTATGATTCAGATATTCA+AGG | 0.479340 | 3.4:+75305823 | MS.gene074407:CDS |
| TCACACCTTGCAAGAGCTGC+AGG | 0.479872 | 3.4:+75304868 | MS.gene074407:CDS |
| CGCCTCAGGTTCAGTTAGCC+GGG | 0.481589 | 3.4:-75304426 | None:intergenic |
| GATGGCTCTATCTGGTGATC+TGG | 0.482695 | 3.4:+75304358 | None:intergenic |
| TCTTGCAAGGTGTGAGGGGT+TGG | 0.482958 | 3.4:-75304860 | None:intergenic |
| GCTCCCCAACCCCAAGTTGA+GGG | 0.486678 | 3.4:+75304392 | MS.gene074407:CDS |
| TGCTCCCCAACCCCAAGTTG+AGG | 0.487998 | 3.4:+75304391 | MS.gene074407:CDS |
| TCCTTCCCTGTAGGCCACCA+TGG | 0.488917 | 3.4:-75304980 | None:intergenic |
| CTCTGGTGAATTTAACATGA+TGG | 0.489439 | 3.4:+75305501 | MS.gene074407:CDS |
| GAGAATTACTTCAGGGGTCA+AGG | 0.490089 | 3.4:+75305931 | MS.gene074407:CDS |
| CATGCCTTCTTCAGATCATG+AGG | 0.490321 | 3.4:-75305061 | None:intergenic |
| GGCCAAGCAGAGGCAATCCC+AGG | 0.494536 | 3.4:+75304574 | MS.gene074407:CDS |
| TTTCTGAAGATGGTGAGAAA+AGG | 0.494881 | 3.4:+75305782 | MS.gene074407:CDS |
| CCAATGGAAACCGCCTCTGA+GGG | 0.495394 | 3.4:-75304940 | None:intergenic |
| CCGAGCTTGAGAGGAGGATG+TGG | 0.496132 | 3.4:+75304489 | MS.gene074407:CDS |
| AATGGTGGAAGGATAAGGTT+AGG | 0.496339 | 3.4:+75304750 | MS.gene074407:CDS |
| GCAATTCCGGGGAAGAATGA+TGG | 0.501691 | 3.4:+75304821 | MS.gene074407:CDS |
| CGGATAATCTCCGCGAATGG+TGG | 0.504192 | 3.4:+75304735 | MS.gene074407:CDS |
| ACCGAAACCAATGGCTCAGC+CGG | 0.505945 | 3.4:+75305717 | MS.gene074407:CDS |
| TCTTCGTCAACCATCGCCTC+AGG | 0.506692 | 3.4:-75304440 | None:intergenic |
| GGACTTGGAGTTTCTGAAGA+TGG | 0.507451 | 3.4:+75305772 | MS.gene074407:CDS |
| CTGAAGAAGGCATGGAAGGT+TGG | 0.507865 | 3.4:+75305070 | MS.gene074407:CDS |
| TTATCCGATGCCCCGGTCAC+AGG | 0.510724 | 3.4:-75304719 | None:intergenic |
| TCTCTCCATCATCCCAATGT+TGG | 0.511441 | 3.4:-75305389 | None:intergenic |
| AGAAGGGTGTTCCTCCTCCA+TGG | 0.516637 | 3.4:+75304963 | MS.gene074407:CDS |
| ATGGAGGTTTGCAAGGCTCA+AGG | 0.517295 | 3.4:+75304662 | MS.gene074407:CDS |
| GGAAGAGGCTGTGACCAACT+TGG | 0.519473 | 3.4:+75305456 | MS.gene074407:CDS |
| AGGATAAAGCTCCCGCGCTA+AGG | 0.520455 | 3.4:-75305233 | None:intergenic |
| GAGCTGCAGGACACAACCTT+GGG | 0.520799 | 3.4:+75304881 | MS.gene074407:CDS |
| ACTTGGATTTCGTGAGGAAG+CGG | 0.521923 | 3.4:+75305473 | MS.gene074407:CDS |
| CAATTGAGTTGTCCATATAG+AGG | 0.522292 | 3.4:+75305613 | MS.gene074407:CDS |
| AAAGCCTGTGACCGGGGCAT+CGG | 0.525234 | 3.4:+75304715 | MS.gene074407:CDS |
| GGACCTTTCGGCATCAATGA+AGG | 0.525234 | 3.4:+75305283 | MS.gene074407:CDS |
| AGAAAGGAAAGCCTGTGACC+GGG | 0.526532 | 3.4:+75304708 | MS.gene074407:CDS |
| TGTGTCCTGCAGCTCTTGCA+AGG | 0.529578 | 3.4:-75304873 | None:intergenic |
| ATCGGTTTACCGAAAGATCA+AGG | 0.532949 | 3.4:+75305019 | MS.gene074407:CDS |
| GAGGCGGTTTCCATTGGAGA+AGG | 0.533081 | 3.4:+75304946 | MS.gene074407:CDS |
| CTGGAAAACCGATGTGAGCT+TGG | 0.533885 | 3.4:-75305567 | None:intergenic |
| GAAGAGTGGTGGCCCCAAAT+CGG | 0.536945 | 3.4:+75305001 | MS.gene074407:CDS |
| CGGCTAAGGAAAGTGCAACC+TGG | 0.537233 | 3.4:+75305185 | MS.gene074407:CDS |
| TCAAGATAAAATGACGGCTA+AGG | 0.537615 | 3.4:+75305171 | MS.gene074407:CDS |
| TGAGGTTTCTTGTAAGGCGG+AGG | 0.540347 | 3.4:-75305043 | None:intergenic |
| GAAGTACATGCTGAAAATGA+TGG | 0.543075 | 3.4:+75304643 | MS.gene074407:CDS |
| GTGTGAGGGGTTGGACCGAT+CGG | 0.543206 | 3.4:-75304851 | None:intergenic |
| GAAAGGAAAGCCTGTGACCG+GGG | 0.544653 | 3.4:+75304709 | MS.gene074407:CDS |
| GACTTTCGCAATGAAGGAAG+AGG | 0.546905 | 3.4:+75305441 | MS.gene074407:CDS |
| TTGCCTCCATCATTCTTCCC+CGG | 0.547718 | 3.4:-75304827 | None:intergenic |
| CTCATGATCTGAAGAAGGCA+TGG | 0.547916 | 3.4:+75305062 | MS.gene074407:CDS |
| TTGATGTTGCCGAGCTTGAG+AGG | 0.548157 | 3.4:+75304480 | MS.gene074407:CDS |
| GCAATGAGTATGATGTCGAT+GGG | 0.548446 | 3.4:+75305305 | MS.gene074407:CDS |
| GAAACCTCATGATCTGAAGA+AGG | 0.550430 | 3.4:+75305057 | MS.gene074407:CDS |
| TGGTACTTGGATATGGCAGC+AGG | 0.551180 | 3.4:-75304788 | None:intergenic |
| AGAGCTGCAGGACACAACCT+TGG | 0.551353 | 3.4:+75304880 | MS.gene074407:CDS |
| GCAGCATGAGAATTACTTCA+GGG | 0.554925 | 3.4:+75305924 | MS.gene074407:CDS |
| TAATCTCCGCGAATGGTGGA+AGG | 0.556888 | 3.4:+75304739 | MS.gene074407:CDS |
| CACCACTCTTCCTTCCCTGT+AGG | 0.558000 | 3.4:-75304989 | None:intergenic |
| AGCTTGAGAGGAGGATGTGG+AGG | 0.561978 | 3.4:+75304492 | MS.gene074407:CDS |
| TGCAGATAAGAGAGAACCCA+AGG | 0.562468 | 3.4:-75304897 | None:intergenic |
| TCCAAGTCCAGTTATATCGA+TGG | 0.562663 | 3.4:-75305758 | None:intergenic |
| CCTGTAGGCCACCATGGAGG+AGG | 0.564770 | 3.4:-75304974 | None:intergenic |
| GGCAATCCCAGGAACAGGCA+AGG | 0.565695 | 3.4:+75304585 | MS.gene074407:CDS |
| TCCAATGGAAACCGCCTCTG+AGG | 0.567003 | 3.4:-75304941 | None:intergenic |
| CAGCTCTTGCAAGGTGTGAG+GGG | 0.568677 | 3.4:-75304864 | None:intergenic |
| TGGAGGTTTGCAAGGCTCAA+GGG | 0.571141 | 3.4:+75304663 | MS.gene074407:CDS |
| TGATCTGAAGAAGGCATGGA+AGG | 0.572466 | 3.4:+75305066 | MS.gene074407:CDS |
| GGCCTACAGGGAAGGAAGAG+TGG | 0.575468 | 3.4:+75304987 | MS.gene074407:CDS |
| TCCATCGATATAACTGGACT+TGG | 0.575840 | 3.4:+75305757 | MS.gene074407:CDS |
| GGTCCAGCTGCGACAAATGG+GGG | 0.576693 | 3.4:-75305265 | None:intergenic |
| TTACTTCAGGGGTCAAGGAA+TGG | 0.577986 | 3.4:+75305936 | MS.gene074407:CDS |
| GATCCGATGCGGCCAAGCAG+AGG | 0.578212 | 3.4:+75304564 | MS.gene074407:CDS |
| GGAGGAACACCCTTCTCCAA+TGG | 0.579400 | 3.4:-75304956 | None:intergenic |
| AGGTCCAGCTGCGACAAATG+GGG | 0.579864 | 3.4:-75305266 | None:intergenic |
| GCTAACTGAACCTGAGGCGA+TGG | 0.580269 | 3.4:+75304430 | MS.gene074407:CDS |
| CTCCCCAACCCCAAGTTGAG+GGG | 0.581721 | 3.4:+75304393 | MS.gene074407:CDS |
| CTTCCTCACGAAATCCAAGT+TGG | 0.583208 | 3.4:-75305470 | None:intergenic |
| TGCTGAATGCTGCTAGCTTG+CGG | 0.585537 | 3.4:-75305901 | None:intergenic |
| AATGGAAACCGCCTCTGAGG+GGG | 0.586396 | 3.4:-75304938 | None:intergenic |
| TCAAGAGGAGGCCTTAGCGC+GGG | 0.589414 | 3.4:+75305222 | MS.gene074407:CDS |
| TCCATGGTGGCCTACAGGGA+AGG | 0.589968 | 3.4:+75304979 | MS.gene074407:CDS |
| GAAAATGATGGAGGTTTGCA+AGG | 0.591397 | 3.4:+75304655 | MS.gene074407:CDS |
| AAGATGTCAAGGGCTCAAGA+TGG | 0.596334 | 3.4:+75304614 | MS.gene074407:CDS |
| GGTCAAGGAATGGTGATGGA+AGG | 0.597963 | 3.4:+75305946 | MS.gene074407:CDS |
| CAGGGGTCAAGGAATGGTGA+TGG | 0.599899 | 3.4:+75305942 | MS.gene074407:CDS |
| TTGCCTTCATTGATGCCGAA+AGG | 0.600278 | 3.4:-75305286 | None:intergenic |
| GAAGATGGTGAGAAAAGGAT+TGG | 0.601828 | 3.4:+75305787 | MS.gene074407:CDS |
| GAGCAAGTCAAACCGAAGGA+AGG | 0.602432 | 3.4:+75304542 | MS.gene074407:CDS |
| AAGGTTAGGTTTGACCGCAA+CGG | 0.602662 | 3.4:+75304764 | MS.gene074407:CDS |
| AATGACTGAGGATATATGAC+TGG | 0.604420 | 3.4:-75305688 | None:intergenic |
| CCAGTTATATCGATGGAAGG+TGG | 0.610149 | 3.4:-75305751 | None:intergenic |
| TCCCCAACCCCAAGTTGAGG+GGG | 0.613156 | 3.4:+75304394 | MS.gene074407:CDS |
| CGCCCGGCTAACTGAACCTG+AGG | 0.614118 | 3.4:+75304424 | MS.gene074407:CDS |
| CCACATCCTCCTCTCAAGCT+CGG | 0.615219 | 3.4:-75304489 | None:intergenic |
| GGCAATGAGTATGATGTCGA+TGG | 0.618237 | 3.4:+75305304 | MS.gene074407:CDS |
| AGGCGGTTTCCATTGGAGAA+GGG | 0.619284 | 3.4:+75304947 | MS.gene074407:CDS |
| CATCGGATAATCTCCGCGAA+TGG | 0.620613 | 3.4:+75304732 | MS.gene074407:CDS |
| TCTTTCGGTAAACCGATTTG+GGG | 0.621358 | 3.4:-75305013 | None:intergenic |
| GCGGAGATTATCCGATGCCC+CGG | 0.628966 | 3.4:-75304726 | None:intergenic |
| TCATGAGGTTTCTTGTAAGG+CGG | 0.630329 | 3.4:-75305046 | None:intergenic |
| AATGATGGAGGCAATCCGAT+CGG | 0.634526 | 3.4:+75304836 | MS.gene074407:CDS |
| GCTTGCAATCGTCAATCAAG+AGG | 0.634856 | 3.4:+75305207 | MS.gene074407:CDS |
| ATCAAGAGGAGGCCTTAGCG+CGG | 0.637665 | 3.4:+75305221 | MS.gene074407:CDS |
| GCTTGAGAGGAGGATGTGGA+GGG | 0.637705 | 3.4:+75304493 | MS.gene074407:CDS |
| TGACCAACTTGGATTTCGTG+AGG | 0.639847 | 3.4:+75305467 | MS.gene074407:CDS |
| TGCAATCGTCAATCAAGAGG+AGG | 0.640235 | 3.4:+75305210 | MS.gene074407:CDS |
| CCTTATAGCCAAGCTCACAT+CGG | 0.641231 | 3.4:+75305559 | MS.gene074407:CDS |
| ATTCGTTCAACCGAAACCAA+TGG | 0.641894 | 3.4:+75305708 | MS.gene074407:CDS |
| AGTCCAGTTATATCGATGGA+AGG | 0.642356 | 3.4:-75305754 | None:intergenic |
| ATGCCTTCAAGATAAAATGA+CGG | 0.643938 | 3.4:+75305165 | MS.gene074407:CDS |
| AAAGGAGCAAGTCAAACCGA+AGG | 0.648111 | 3.4:+75304538 | MS.gene074407:CDS |
| GATGGTGAGAAAAGGATTGG+TGG | 0.649012 | 3.4:+75305790 | MS.gene074407:CDS |
| ATATGGCAGCAGGACCGTTG+CGG | 0.650469 | 3.4:-75304778 | None:intergenic |
| TATAAGGACATGTTGAGTGT+TGG | 0.651109 | 3.4:-75305543 | None:intergenic |
| AGGGTGTTCCTCCTCCATGG+TGG | 0.653236 | 3.4:+75304966 | MS.gene074407:CDS |
| TTCGGTTGAACGAATGACTG+AGG | 0.658942 | 3.4:-75305700 | None:intergenic |
| CAATGGAAACCGCCTCTGAG+GGG | 0.659298 | 3.4:-75304939 | None:intergenic |
| GTCCAGCTGCGACAAATGGG+GGG | 0.662952 | 3.4:-75305264 | None:intergenic |
| CTACAGGGAAGGAAGAGTGG+TGG | 0.665816 | 3.4:+75304990 | MS.gene074407:CDS |
| CAATGAGTATGATGTCGATG+GGG | 0.670997 | 3.4:+75305306 | MS.gene074407:CDS |
| AATGAGTATGATGTCGATGG+GGG | 0.671000 | 3.4:+75305307 | MS.gene074407:CDS |
| AATCCCAGGAACAGGCAAGG+AGG | 0.672658 | 3.4:+75304588 | MS.gene074407:CDS |
| TTCCCTGTAGGCCACCATGG+AGG | 0.673523 | 3.4:-75304977 | None:intergenic |
| ATGTTGCCGAGCTTGAGAGG+AGG | 0.673867 | 3.4:+75304483 | MS.gene074407:CDS |
| ATTCCGGGGAAGAATGATGG+AGG | 0.679869 | 3.4:+75304824 | MS.gene074407:CDS |
| AAGCTGACAATGCAATTCCG+GGG | 0.692590 | 3.4:+75304810 | MS.gene074407:CDS |
| CTGAATCATAGACAGTCATG+AGG | 0.695799 | 3.4:-75305813 | None:intergenic |
| CAGCATGAGAATTACTTCAG+GGG | 0.700026 | 3.4:+75305925 | MS.gene074407:CDS |
| CTCAGGTTCAGTTAGCCGGG+CGG | 0.704152 | 3.4:-75304423 | None:intergenic |
| TGGCAGCCACTTAACCGCAG+CGG | 0.706818 | 3.4:+75305864 | MS.gene074407:CDS |
| ACCGAAGGAAGGATCCGATG+CGG | 0.718950 | 3.4:+75304553 | MS.gene074407:CDS |
| GTACATGCTGAAAATGATGG+AGG | 0.724912 | 3.4:+75304646 | MS.gene074407:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ATGCCTTCAAGATAAAATGA+CGG | + | chr3.4:75305165-75305184 | MS.gene074407:CDS | 30.0% | |
| GTCTATGATTCAGATATTCA+AGG | + | chr3.4:75305823-75305842 | MS.gene074407:CDS | 30.0% | |
| TTCTTCATCAATCCAACATT+GGG | + | chr3.4:75305377-75305396 | MS.gene074407:CDS | 30.0% | |
| ! | TGTTGGCAAGTGAAAATTTT+AGG | - | chr3.4:75305529-75305548 | None:intergenic | 30.0% |
| !!! | CATTTTATCTTGAAGGCATT+TGG | - | chr3.4:75305164-75305183 | None:intergenic | 30.0% |
| AAGGAGGAAAAAGATGTCAA+GGG | + | chr3.4:75304604-75304623 | MS.gene074407:CDS | 35.0% | |
| AATGACTGAGGATATATGAC+TGG | - | chr3.4:75305691-75305710 | None:intergenic | 35.0% | |
| ACCTCATTAGCATGAAAACT+TGG | - | chr3.4:75305664-75305683 | None:intergenic | 35.0% | |
| AGATCATGAGGTTTCTTGTA+AGG | - | chr3.4:75305052-75305071 | None:intergenic | 35.0% | |
| CTCTGGTGAATTTAACATGA+TGG | + | chr3.4:75305501-75305520 | MS.gene074407:CDS | 35.0% | |
| CTTCTTCATCAATCCAACAT+TGG | + | chr3.4:75305376-75305395 | MS.gene074407:CDS | 35.0% | |
| GAAGTACATGCTGAAAATGA+TGG | + | chr3.4:75304643-75304662 | MS.gene074407:CDS | 35.0% | |
| GATTGATGAAGAAGATTCTC+AGG | - | chr3.4:75305370-75305389 | None:intergenic | 35.0% | |
| TATAAGGACATGTTGAGTGT+TGG | - | chr3.4:75305546-75305565 | None:intergenic | 35.0% | |
| TCAAGATAAAATGACGGCTA+AGG | + | chr3.4:75305171-75305190 | MS.gene074407:CDS | 35.0% | |
| ! | ATCTTTCGGTAAACCGATTT+GGG | - | chr3.4:75305017-75305036 | None:intergenic | 35.0% |
| ! | CAATTGAGTTGTCCATATAG+AGG | + | chr3.4:75305613-75305632 | MS.gene074407:CDS | 35.0% |
| ! | GGCAACATGAATTTAACTTC+TGG | + | chr3.4:75305844-75305863 | MS.gene074407:CDS | 35.0% |
| ! | TCCAAGTTTTCATGCTAATG+AGG | + | chr3.4:75305660-75305679 | MS.gene074407:CDS | 35.0% |
| ! | TCTTCTTCATCTGATTTTGG+TGG | + | chr3.4:75305637-75305656 | MS.gene074407:CDS | 35.0% |
| ! | TTTCTGAAGATGGTGAGAAA+AGG | + | chr3.4:75305782-75305801 | MS.gene074407:CDS | 35.0% |
| !! | TAGCCGTCATTTTATCTTGA+AGG | - | chr3.4:75305171-75305190 | None:intergenic | 35.0% |
| AATGAGTATGATGTCGATGG+GGG | + | chr3.4:75305307-75305326 | MS.gene074407:CDS | 40.0% | |
| ACAAATGGGGGGATATAATC+AGG | - | chr3.4:75305256-75305275 | None:intergenic | 40.0% | |
| AGCAGCATGAGAATTACTTC+AGG | + | chr3.4:75305923-75305942 | MS.gene074407:CDS | 40.0% | |
| AGTCCAGTTATATCGATGGA+AGG | - | chr3.4:75305757-75305776 | None:intergenic | 40.0% | |
| ATTCGTTCAACCGAAACCAA+TGG | + | chr3.4:75305708-75305727 | MS.gene074407:CDS | 40.0% | |
| ATTGCGAAAGTCTGCTGAAA+TGG | - | chr3.4:75305433-75305452 | None:intergenic | 40.0% | |
| CAAGGAGGAAAAAGATGTCA+AGG | + | chr3.4:75304603-75304622 | MS.gene074407:CDS | 40.0% | |
| CAATGAGTATGATGTCGATG+GGG | + | chr3.4:75305306-75305325 | MS.gene074407:CDS | 40.0% | |
| CAGCATGAGAATTACTTCAG+GGG | + | chr3.4:75305925-75305944 | MS.gene074407:CDS | 40.0% | |
| CCAAAATTCGCAAGCTTGTA+AGG | + | chr3.4:75305134-75305153 | MS.gene074407:CDS | 40.0% | |
| CGTTCCTCCACATCAAAATT+CGG | - | chr3.4:75305343-75305362 | None:intergenic | 40.0% | |
| CTGAATCATAGACAGTCATG+AGG | - | chr3.4:75305816-75305835 | None:intergenic | 40.0% | |
| GAAACCTCATGATCTGAAGA+AGG | + | chr3.4:75305057-75305076 | MS.gene074407:CDS | 40.0% | |
| GAAGATGGTGAGAAAAGGAT+TGG | + | chr3.4:75305787-75305806 | MS.gene074407:CDS | 40.0% | |
| GAAGGTGGAACCATATTAAC+CGG | - | chr3.4:75305739-75305758 | None:intergenic | 40.0% | |
| GATCTTTCGGTAAACCGATT+TGG | - | chr3.4:75305018-75305037 | None:intergenic | 40.0% | |
| GATGAAGAAGAGCCTCTATA+TGG | - | chr3.4:75305628-75305647 | None:intergenic | 40.0% | |
| GCAATGAGTATGATGTCGAT+GGG | + | chr3.4:75305305-75305324 | MS.gene074407:CDS | 40.0% | |
| GCAGCATGAGAATTACTTCA+GGG | + | chr3.4:75305924-75305943 | MS.gene074407:CDS | 40.0% | |
| GTACATGCTGAAAATGATGG+AGG | + | chr3.4:75304646-75304665 | MS.gene074407:CDS | 40.0% | |
| TCAATCCAACATTGGGATGA+TGG | + | chr3.4:75305384-75305403 | MS.gene074407:CDS | 40.0% | |
| TCATGAGGTTTCTTGTAAGG+CGG | - | chr3.4:75305049-75305068 | None:intergenic | 40.0% | |
| TCCAAGTCCAGTTATATCGA+TGG | - | chr3.4:75305761-75305780 | None:intergenic | 40.0% | |
| TCCATCGATATAACTGGACT+TGG | + | chr3.4:75305757-75305776 | MS.gene074407:CDS | 40.0% | |
| ! | AAGGCTCAAGGGTTTGTTTA+CGG | + | chr3.4:75304674-75304693 | MS.gene074407:CDS | 40.0% |
| ! | AATGGTGGAAGGATAAGGTT+AGG | + | chr3.4:75304750-75304769 | MS.gene074407:CDS | 40.0% |
| ! | ATCGGTTTACCGAAAGATCA+AGG | + | chr3.4:75305019-75305038 | MS.gene074407:CDS | 40.0% |
| ! | CCTTACAAGCTTGCGAATTT+TGG | - | chr3.4:75305137-75305156 | None:intergenic | 40.0% |
| ! | GAAAATGATGGAGGTTTGCA+AGG | + | chr3.4:75304655-75304674 | MS.gene074407:CDS | 40.0% |
| ! | GGCTCTTCTTCATCTGATTT+TGG | + | chr3.4:75305634-75305653 | MS.gene074407:CDS | 40.0% |
| !! | CGAATTTTGATGTGGAGGAA+CGG | + | chr3.4:75305341-75305360 | MS.gene074407:CDS | 40.0% |
| !! | CTTGCGAATTTTGGCAATGT+CGG | - | chr3.4:75305128-75305147 | None:intergenic | 40.0% |
| !! | TCTTTCGGTAAACCGATTTG+GGG | - | chr3.4:75305016-75305035 | None:intergenic | 40.0% |
| !! | TTGCGAATTTTGGCAATGTC+GGG | - | chr3.4:75305127-75305146 | None:intergenic | 40.0% |
| AAAGGAGCAAGTCAAACCGA+AGG | + | chr3.4:75304538-75304557 | MS.gene074407:CDS | 45.0% | |
| AAGATGTCAAGGGCTCAAGA+TGG | + | chr3.4:75304614-75304633 | MS.gene074407:CDS | 45.0% | |
| AAGCTGACAATGCAATTCCG+GGG | + | chr3.4:75304810-75304829 | MS.gene074407:CDS | 45.0% | |
| AAGGTTAGGTTTGACCGCAA+CGG | + | chr3.4:75304764-75304783 | MS.gene074407:CDS | 45.0% | |
| AATGGCTCAGCCGGTTAATA+TGG | + | chr3.4:75305726-75305745 | MS.gene074407:CDS | 45.0% | |
| ACTTGGATTTCGTGAGGAAG+CGG | + | chr3.4:75305473-75305492 | MS.gene074407:CDS | 45.0% | |
| ATATTAACCGGCTGAGCCAT+TGG | - | chr3.4:75305727-75305746 | None:intergenic | 45.0% | |
| CAAGCTGACAATGCAATTCC+GGG | + | chr3.4:75304809-75304828 | MS.gene074407:CDS | 45.0% | |
| CATGCCTTCTTCAGATCATG+AGG | - | chr3.4:75305064-75305083 | None:intergenic | 45.0% | |
| CCAAGCTGACAATGCAATTC+CGG | + | chr3.4:75304808-75304827 | MS.gene074407:CDS | 45.0% | |
| CCACCTTCCATCGATATAAC+TGG | + | chr3.4:75305751-75305770 | MS.gene074407:CDS | 45.0% | |
| CCAGTTATATCGATGGAAGG+TGG | - | chr3.4:75305754-75305773 | None:intergenic | 45.0% | |
| CCTTATAGCCAAGCTCACAT+CGG | + | chr3.4:75305559-75305578 | MS.gene074407:CDS | 45.0% | |
| CTCATGATCTGAAGAAGGCA+TGG | + | chr3.4:75305062-75305081 | MS.gene074407:CDS | 45.0% | |
| CTTCCTCACGAAATCCAAGT+TGG | - | chr3.4:75305473-75305492 | None:intergenic | 45.0% | |
| GACTTTCGCAATGAAGGAAG+AGG | + | chr3.4:75305441-75305460 | MS.gene074407:CDS | 45.0% | |
| GAGAATTACTTCAGGGGTCA+AGG | + | chr3.4:75305931-75305950 | MS.gene074407:CDS | 45.0% | |
| GATGGTGAGAAAAGGATTGG+TGG | + | chr3.4:75305790-75305809 | MS.gene074407:CDS | 45.0% | |
| GCTTGCAATCGTCAATCAAG+AGG | + | chr3.4:75305207-75305226 | MS.gene074407:CDS | 45.0% | |
| GGCAATGAGTATGATGTCGA+TGG | + | chr3.4:75305304-75305323 | MS.gene074407:CDS | 45.0% | |
| GGTAATATCCCCCTCAACTT+GGG | - | chr3.4:75304405-75304424 | None:intergenic | 45.0% | |
| GGTGCTTCTCAAGCGATTAA+AGG | + | chr3.4:75304520-75304539 | MS.gene074407:CDS | 45.0% | |
| GTAATATCCCCCTCAACTTG+GGG | - | chr3.4:75304404-75304423 | None:intergenic | 45.0% | |
| GTCAGCTTGGTACTTGGATA+TGG | - | chr3.4:75304798-75304817 | None:intergenic | 45.0% | |
| TCAGCAGACTTTCGCAATGA+AGG | + | chr3.4:75305435-75305454 | MS.gene074407:CDS | 45.0% | |
| TCTCTCCATCATCCCAATGT+TGG | - | chr3.4:75305392-75305411 | None:intergenic | 45.0% | |
| TGACCAACTTGGATTTCGTG+AGG | + | chr3.4:75305467-75305486 | MS.gene074407:CDS | 45.0% | |
| TGCAATCGTCAATCAAGAGG+AGG | + | chr3.4:75305210-75305229 | MS.gene074407:CDS | 45.0% | |
| TGCAGATAAGAGAGAACCCA+AGG | - | chr3.4:75304900-75304919 | None:intergenic | 45.0% | |
| TGCATTGTCAGCTTGGTACT+TGG | - | chr3.4:75304804-75304823 | None:intergenic | 45.0% | |
| TTACTTCAGGGGTCAAGGAA+TGG | + | chr3.4:75305936-75305955 | MS.gene074407:CDS | 45.0% | |
| TTCGGTTGAACGAATGACTG+AGG | - | chr3.4:75305703-75305722 | None:intergenic | 45.0% | |
| TTGATTGACGATTGCAAGCC+AGG | - | chr3.4:75305206-75305225 | None:intergenic | 45.0% | |
| TTGCCTTCATTGATGCCGAA+AGG | - | chr3.4:75305289-75305308 | None:intergenic | 45.0% | |
| ! | AATGATGGAGGCAATCCGAT+CGG | + | chr3.4:75304836-75304855 | MS.gene074407:CDS | 45.0% |
| ! | AGGCTCAAGGGTTTGTTTAC+GGG | + | chr3.4:75304675-75304694 | MS.gene074407:CDS | 45.0% |
| ! | CAAGATGTGATTTTCCGCTG+CGG | - | chr3.4:75305881-75305900 | None:intergenic | 45.0% |
| ! | GGACTTGGAGTTTCTGAAGA+TGG | + | chr3.4:75305772-75305791 | MS.gene074407:CDS | 45.0% |
| ! | TGATCTGAAGAAGGCATGGA+AGG | + | chr3.4:75305066-75305085 | MS.gene074407:CDS | 45.0% |
| ! | TTTTCCAGACAGGGCTTCTA+GGG | + | chr3.4:75305582-75305601 | MS.gene074407:CDS | 45.0% |
| !! | AGAGGAGCCGAATTTTGATG+TGG | + | chr3.4:75305333-75305352 | MS.gene074407:CDS | 45.0% |
| !!! | TCACATCGGTTTTCCAGACA+GGG | + | chr3.4:75305573-75305592 | MS.gene074407:CDS | 45.0% |
| AAAGGTCCAGCTGCGACAAA+TGG | - | chr3.4:75305271-75305290 | None:intergenic | 50.0% | |
| AAGGTCCAGCTGCGACAAAT+GGG | - | chr3.4:75305270-75305289 | None:intergenic | 50.0% | |
| AGAAAGGAAAGCCTGTGACC+GGG | + | chr3.4:75304708-75304727 | MS.gene074407:CDS | 50.0% | |
| AGGCGGTTTCCATTGGAGAA+GGG | + | chr3.4:75304947-75304966 | MS.gene074407:CDS | 50.0% | |
| ATGGAGGTTTGCAAGGCTCA+AGG | + | chr3.4:75304662-75304681 | MS.gene074407:CDS | 50.0% | |
| ATTCCGGGGAAGAATGATGG+AGG | + | chr3.4:75304824-75304843 | MS.gene074407:CDS | 50.0% | |
| CATCGGATAATCTCCGCGAA+TGG | + | chr3.4:75304732-75304751 | MS.gene074407:CDS | 50.0% | |
| CCGATGTGAGCTTGGCTATA+AGG | - | chr3.4:75305562-75305581 | None:intergenic | 50.0% | |
| CCGGAATTGCATTGTCAGCT+TGG | - | chr3.4:75304811-75304830 | None:intergenic | 50.0% | |
| CCTTATCCTTCCACCATTCG+CGG | - | chr3.4:75304748-75304767 | None:intergenic | 50.0% | |
| CGGTAATATCCCCCTCAACT+TGG | - | chr3.4:75304406-75304425 | None:intergenic | 50.0% | |
| CTGGAAAACCGATGTGAGCT+TGG | - | chr3.4:75305570-75305589 | None:intergenic | 50.0% | |
| GAGAAAGGAAAGCCTGTGAC+CGG | + | chr3.4:75304707-75304726 | MS.gene074407:CDS | 50.0% | |
| GAGCAAGTCAAACCGAAGGA+AGG | + | chr3.4:75304542-75304561 | MS.gene074407:CDS | 50.0% | |
| GCAATTCCGGGGAAGAATGA+TGG | + | chr3.4:75304821-75304840 | MS.gene074407:CDS | 50.0% | |
| GGACCTTTCGGCATCAATGA+AGG | + | chr3.4:75305283-75305302 | MS.gene074407:CDS | 50.0% | |
| GGTCACAGGCTTTCCTTTCT+CGG | - | chr3.4:75304708-75304727 | None:intergenic | 50.0% | |
| GTCACAGGCTTTCCTTTCTC+GGG | - | chr3.4:75304707-75304726 | None:intergenic | 50.0% | |
| TACGGGATCATTCCCGAGAA+AGG | + | chr3.4:75304692-75304711 | MS.gene074407:CDS | 50.0% | |
| TGAGGTTTCTTGTAAGGCGG+AGG | - | chr3.4:75305046-75305065 | None:intergenic | 50.0% | |
| TGGAGGTTTGCAAGGCTCAA+GGG | + | chr3.4:75304663-75304682 | MS.gene074407:CDS | 50.0% | |
| TGGTACTTGGATATGGCAGC+AGG | - | chr3.4:75304791-75304810 | None:intergenic | 50.0% | |
| TTGATGTTGCCGAGCTTGAG+AGG | + | chr3.4:75304480-75304499 | MS.gene074407:CDS | 50.0% | |
| TTGCCTCCATCATTCTTCCC+CGG | - | chr3.4:75304830-75304849 | None:intergenic | 50.0% | |
| TTTCCTCCTTGCCTGTTCCT+GGG | - | chr3.4:75304594-75304613 | None:intergenic | 50.0% | |
| TTTGTCGCAGCTGGACCTTT+CGG | + | chr3.4:75305271-75305290 | MS.gene074407:CDS | 50.0% | |
| ! | CTGAAGAAGGCATGGAAGGT+TGG | + | chr3.4:75305070-75305089 | MS.gene074407:CDS | 50.0% |
| ! | GATTTTCCGCTGCGGTTAAG+TGG | - | chr3.4:75305873-75305892 | None:intergenic | 50.0% |
| ! | GTTTTCCAGACAGGGCTTCT+AGG | + | chr3.4:75305581-75305600 | MS.gene074407:CDS | 50.0% |
| ! | TAATCTCCGCGAATGGTGGA+AGG | + | chr3.4:75304739-75304758 | MS.gene074407:CDS | 50.0% |
| ! | TGCTGAATGCTGCTAGCTTG+CGG | - | chr3.4:75305904-75305923 | None:intergenic | 50.0% |
| ! | TTTTCCTCCTTGCCTGTTCC+TGG | - | chr3.4:75304595-75304614 | None:intergenic | 50.0% |
| !! | GGAGCCGAATTTTGATGTGG+AGG | + | chr3.4:75305336-75305355 | MS.gene074407:CDS | 50.0% |
| !! | GGTCAAGGAATGGTGATGGA+AGG | + | chr3.4:75305946-75305965 | MS.gene074407:CDS | 50.0% |
| !!! | CTCACATCGGTTTTCCAGAC+AGG | + | chr3.4:75305572-75305591 | MS.gene074407:CDS | 50.0% |
| AACACTGTGATCCCCCTCAG+AGG | + | chr3.4:75304927-75304946 | MS.gene074407:CDS | 55.0% | |
| AATCCCAGGAACAGGCAAGG+AGG | + | chr3.4:75304588-75304607 | MS.gene074407:CDS | 55.0% | |
| ACCGAAACCAATGGCTCAGC+CGG | + | chr3.4:75305717-75305736 | MS.gene074407:CDS | 55.0% | |
| ACCGAAGGAAGGATCCGATG+CGG | + | chr3.4:75304553-75304572 | MS.gene074407:CDS | 55.0% | |
| AGAGCTGCAGGACACAACCT+TGG | + | chr3.4:75304880-75304899 | MS.gene074407:CDS | 55.0% | |
| AGCTTGAGAGGAGGATGTGG+AGG | + | chr3.4:75304492-75304511 | MS.gene074407:CDS | 55.0% | |
| AGGATAAAGCTCCCGCGCTA+AGG | - | chr3.4:75305236-75305255 | None:intergenic | 55.0% | |
| AGGTCCAGCTGCGACAAATG+GGG | - | chr3.4:75305269-75305288 | None:intergenic | 55.0% | |
| ATATGGCAGCAGGACCGTTG+CGG | - | chr3.4:75304781-75304800 | None:intergenic | 55.0% | |
| ATCAAGAGGAGGCCTTAGCG+CGG | + | chr3.4:75305221-75305240 | MS.gene074407:CDS | 55.0% | |
| ATCCCCCTCAACTTGGGGTT+GGG | - | chr3.4:75304399-75304418 | None:intergenic | 55.0% | |
| ATGTTGCCGAGCTTGAGAGG+AGG | + | chr3.4:75304483-75304502 | MS.gene074407:CDS | 55.0% | |
| CAATGGAAACCGCCTCTGAG+GGG | - | chr3.4:75304942-75304961 | None:intergenic | 55.0% | |
| CACCACTCTTCCTTCCCTGT+AGG | - | chr3.4:75304992-75305011 | None:intergenic | 55.0% | |
| CAGCTCTTGCAAGGTGTGAG+GGG | - | chr3.4:75304867-75304886 | None:intergenic | 55.0% | |
| CAGGGGTCAAGGAATGGTGA+TGG | + | chr3.4:75305942-75305961 | MS.gene074407:CDS | 55.0% | |
| CCAATGGAAACCGCCTCTGA+GGG | - | chr3.4:75304943-75304962 | None:intergenic | 55.0% | |
| CCACATCCTCCTCTCAAGCT+CGG | - | chr3.4:75304492-75304511 | None:intergenic | 55.0% | |
| CGGATAATCTCCGCGAATGG+TGG | + | chr3.4:75304735-75304754 | MS.gene074407:CDS | 55.0% | |
| CTACAGGGAAGGAAGAGTGG+TGG | + | chr3.4:75304990-75305009 | MS.gene074407:CDS | 55.0% | |
| GAAAGGAAAGCCTGTGACCG+GGG | + | chr3.4:75304709-75304728 | MS.gene074407:CDS | 55.0% | |
| GAAGAGTGGTGGCCCCAAAT+CGG | + | chr3.4:75305001-75305020 | MS.gene074407:CDS | 55.0% | |
| GAGCTGCAGGACACAACCTT+GGG | + | chr3.4:75304881-75304900 | MS.gene074407:CDS | 55.0% | |
| GAGGAGGATGTGGAGGGATA+AGG | + | chr3.4:75304499-75304518 | MS.gene074407:CDS | 55.0% | |
| GAGGCGGTTTCCATTGGAGA+AGG | + | chr3.4:75304946-75304965 | MS.gene074407:CDS | 55.0% | |
| GCAGCTCTTGCAAGGTGTGA+GGG | - | chr3.4:75304868-75304887 | None:intergenic | 55.0% | |
| GCTAACTGAACCTGAGGCGA+TGG | + | chr3.4:75304430-75304449 | MS.gene074407:CDS | 55.0% | |
| GCTTGAGAGGAGGATGTGGA+GGG | + | chr3.4:75304493-75304512 | MS.gene074407:CDS | 55.0% | |
| GGAAGAGGCTGTGACCAACT+TGG | + | chr3.4:75305456-75305475 | MS.gene074407:CDS | 55.0% | |
| GGAGGAACACCCTTCTCCAA+TGG | - | chr3.4:75304959-75304978 | None:intergenic | 55.0% | |
| GGCGGAGGACCTTGATCTTT+CGG | - | chr3.4:75305031-75305050 | None:intergenic | 55.0% | |
| GTATCCCTAGAAGCCCTGTC+TGG | - | chr3.4:75305589-75305608 | None:intergenic | 55.0% | |
| GTGAGGAAGCGGAAGATCTC+TGG | + | chr3.4:75305484-75305503 | MS.gene074407:CDS | 55.0% | |
| TATCCCCCTCAACTTGGGGT+TGG | - | chr3.4:75304400-75304419 | None:intergenic | 55.0% | |
| TCACACCTTGCAAGAGCTGC+AGG | + | chr3.4:75304868-75304887 | MS.gene074407:CDS | 55.0% | |
| TCCAATGGAAACCGCCTCTG+AGG | - | chr3.4:75304944-75304963 | None:intergenic | 55.0% | |
| TCGCCTCAGGTTCAGTTAGC+CGG | - | chr3.4:75304430-75304449 | None:intergenic | 55.0% | |
| TCTTCGTCAACCATCGCCTC+AGG | - | chr3.4:75304443-75304462 | None:intergenic | 55.0% | |
| TCTTGCAAGGTGTGAGGGGT+TGG | - | chr3.4:75304863-75304882 | None:intergenic | 55.0% | |
| TGATGTCGATGGGGGAGAAG+AGG | + | chr3.4:75305315-75305334 | MS.gene074407:CDS | 55.0% | |
| TGCAGCTCTTGCAAGGTGTG+AGG | - | chr3.4:75304869-75304888 | None:intergenic | 55.0% | |
| TGTGTCCTGCAGCTCTTGCA+AGG | - | chr3.4:75304876-75304895 | None:intergenic | 55.0% | |
| TTCCTGGGATTGCCTCTGCT+TGG | - | chr3.4:75304579-75304598 | None:intergenic | 55.0% | |
| TTGAGGGGGATATTACCGCC+CGG | + | chr3.4:75304408-75304427 | MS.gene074407:CDS | 55.0% | |
| ! | AATGGAAACCGCCTCTGAGG+GGG | - | chr3.4:75304941-75304960 | None:intergenic | 55.0% |
| ! | CCGCGAATGGTGGAAGGATA+AGG | + | chr3.4:75304745-75304764 | MS.gene074407:CDS | 55.0% |
| ! | CGGCTAAGGAAAGTGCAACC+TGG | + | chr3.4:75305185-75305204 | MS.gene074407:CDS | 55.0% |
| !! | ACCGGCTGAGCCATTGGTTT+CGG | - | chr3.4:75305721-75305740 | None:intergenic | 55.0% |
| !! | AGAAGGGTGTTCCTCCTCCA+TGG | + | chr3.4:75304963-75304982 | MS.gene074407:CDS | 55.0% |
| AAAGCCTGTGACCGGGGCAT+CGG | + | chr3.4:75304715-75304734 | MS.gene074407:CDS | 60.0% | |
| ACTGTGATCCCCCTCAGAGG+CGG | + | chr3.4:75304930-75304949 | MS.gene074407:CDS | 60.0% | |
| ATCCCCCCATTTGTCGCAGC+TGG | + | chr3.4:75305262-75305281 | MS.gene074407:CDS | 60.0% | |
| CCCTCAGAGGCGGTTTCCAT+TGG | + | chr3.4:75304940-75304959 | MS.gene074407:CDS | 60.0% | |
| CCGAGCTTGAGAGGAGGATG+TGG | + | chr3.4:75304489-75304508 | MS.gene074407:CDS | 60.0% | |
| CGCCTCAGGTTCAGTTAGCC+GGG | - | chr3.4:75304429-75304448 | None:intergenic | 60.0% | |
| CTCAGGTTCAGTTAGCCGGG+CGG | - | chr3.4:75304426-75304445 | None:intergenic | 60.0% | |
| CTCCTCCATGGTGGCCTACA+GGG | + | chr3.4:75304975-75304994 | MS.gene074407:CDS | 60.0% | |
| GCAGAGGCAATCCCAGGAAC+AGG | + | chr3.4:75304580-75304599 | MS.gene074407:CDS | 60.0% | |
| GCCGCATCGGATCCTTCCTT+CGG | - | chr3.4:75304557-75304576 | None:intergenic | 60.0% | |
| GCGGAGATTATCCGATGCCC+CGG | - | chr3.4:75304729-75304748 | None:intergenic | 60.0% | |
| GGCAATCCCAGGAACAGGCA+AGG | + | chr3.4:75304585-75304604 | MS.gene074407:CDS | 60.0% | |
| GGCCTACAGGGAAGGAAGAG+TGG | + | chr3.4:75304987-75305006 | MS.gene074407:CDS | 60.0% | |
| GGTCCAGCTGCGACAAATGG+GGG | - | chr3.4:75305268-75305287 | None:intergenic | 60.0% | |
| GTCCAGCTGCGACAAATGGG+GGG | - | chr3.4:75305267-75305286 | None:intergenic | 60.0% | |
| GTGTGAGGGGTTGGACCGAT+CGG | - | chr3.4:75304854-75304873 | None:intergenic | 60.0% | |
| TCAAGAGGAGGCCTTAGCGC+GGG | + | chr3.4:75305222-75305241 | MS.gene074407:CDS | 60.0% | |
| TCCATGGTGGCCTACAGGGA+AGG | + | chr3.4:75304979-75304998 | MS.gene074407:CDS | 60.0% | |
| TCCCCCTCAACTTGGGGTTG+GGG | - | chr3.4:75304398-75304417 | None:intergenic | 60.0% | |
| TCCTTCCCTGTAGGCCACCA+TGG | - | chr3.4:75304983-75305002 | None:intergenic | 60.0% | |
| TGCTCCCCAACCCCAAGTTG+AGG | + | chr3.4:75304391-75304410 | MS.gene074407:CDS | 60.0% | |
| TGGCAGCCACTTAACCGCAG+CGG | + | chr3.4:75305864-75305883 | MS.gene074407:CDS | 60.0% | |
| TTATCCGATGCCCCGGTCAC+AGG | - | chr3.4:75304722-75304741 | None:intergenic | 60.0% | |
| TTCCCTGTAGGCCACCATGG+AGG | - | chr3.4:75304980-75304999 | None:intergenic | 60.0% | |
| TTGCCTCTGCTTGGCCGCAT+CGG | - | chr3.4:75304570-75304589 | None:intergenic | 60.0% | |
| ! | AGGGTGTTCCTCCTCCATGG+TGG | + | chr3.4:75304966-75304985 | MS.gene074407:CDS | 60.0% |
| ! | CTCCCCAACCCCAAGTTGAG+GGG | + | chr3.4:75304393-75304412 | MS.gene074407:CDS | 60.0% |
| ! | GCTCCCCAACCCCAAGTTGA+GGG | + | chr3.4:75304392-75304411 | MS.gene074407:CDS | 60.0% |
| ! | TCCCCAACCCCAAGTTGAGG+GGG | + | chr3.4:75304394-75304413 | MS.gene074407:CDS | 60.0% |
| CCTCCTCCATGGTGGCCTAC+AGG | + | chr3.4:75304974-75304993 | MS.gene074407:CDS | 65.0% | |
| CCTGTAGGCCACCATGGAGG+AGG | - | chr3.4:75304977-75304996 | None:intergenic | 65.0% | |
| CGCCCGGCTAACTGAACCTG+AGG | + | chr3.4:75304424-75304443 | MS.gene074407:CDS | 65.0% | |
| GATCCGATGCGGCCAAGCAG+AGG | + | chr3.4:75304564-75304583 | MS.gene074407:CDS | 65.0% | |
| GGCCAAGCAGAGGCAATCCC+AGG | + | chr3.4:75304574-75304593 | MS.gene074407:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 75304359 | 75305992 | 75304359 | ID=MS.gene074407 |
| chr3.4 | mRNA | 75304359 | 75305992 | 75304359 | ID=MS.gene074407.t1;Parent=MS.gene074407 |
| chr3.4 | exon | 75304359 | 75305992 | 75304359 | ID=MS.gene074407.t1.exon1;Parent=MS.gene074407.t1 |
| chr3.4 | CDS | 75304359 | 75305992 | 75304359 | ID=cds.MS.gene074407.t1;Parent=MS.gene074407.t1 |
| Gene Sequence |
| Protein sequence |
