Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074431.t1 | XP_024629356.1 | 91.6 | 736 | 42 | 1 | 1 | 716 | 1 | 736 | 0.00E+00 | 1366.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074431.t1 | Q9SZL8 | 30.7 | 574 | 369 | 7 | 7 | 554 | 70 | 640 | 2.5e-82 | 308.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074431.t1 | A0A396JHA3 | 91.2 | 593 | 32 | 1 | 1 | 573 | 1 | 593 | 0.0e+00 | 1104.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene074431.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074431.t1 | MTR_5g039760 | 65.534 | 206 | 46 | 2 | 1 | 205 | 1 | 182 | 1.16e-87 | 273 |
MS.gene074431.t1 | MTR_7g074790 | 65.730 | 178 | 43 | 1 | 1 | 178 | 1 | 160 | 9.08e-76 | 244 |
MS.gene074431.t1 | MTR_7g074790 | 38.400 | 125 | 57 | 5 | 597 | 704 | 97 | 218 | 3.14e-11 | 64.3 |
MS.gene074431.t1 | MTR_7g061980 | 84.034 | 119 | 19 | 0 | 1 | 119 | 1 | 119 | 2.94e-63 | 206 |
MS.gene074431.t1 | MTR_0402s0040 | 43.646 | 181 | 97 | 4 | 10 | 187 | 26 | 204 | 2.77e-33 | 134 |
MS.gene074431.t1 | MTR_0558s0020 | 29.961 | 257 | 157 | 5 | 3 | 239 | 32 | 285 | 1.28e-30 | 122 |
MS.gene074431.t1 | MTR_6g051425 | 30.466 | 279 | 162 | 6 | 9 | 257 | 13 | 289 | 5.69e-30 | 122 |
MS.gene074431.t1 | MTR_3g058090 | 47.619 | 126 | 42 | 2 | 523 | 648 | 5 | 106 | 7.03e-28 | 108 |
MS.gene074431.t1 | MTR_4g069880 | 70.588 | 68 | 20 | 0 | 1 | 68 | 1 | 68 | 1.94e-24 | 97.4 |
MS.gene074431.t1 | MTR_4g102720 | 33.333 | 171 | 80 | 2 | 5 | 175 | 2 | 138 | 2.88e-24 | 102 |
MS.gene074431.t1 | MTR_8g446020 | 29.289 | 239 | 143 | 6 | 3 | 239 | 31 | 245 | 1.21e-23 | 101 |
MS.gene074431.t1 | MTR_6g090505 | 28.514 | 249 | 160 | 5 | 42 | 275 | 9 | 254 | 4.46e-22 | 99.0 |
MS.gene074431.t1 | MTR_1g083640 | 25.926 | 243 | 157 | 5 | 3 | 225 | 47 | 286 | 1.70e-21 | 95.9 |
MS.gene074431.t1 | MTR_1g070355 | 25.877 | 228 | 162 | 3 | 16 | 239 | 80 | 304 | 1.10e-18 | 90.5 |
MS.gene074431.t1 | MTR_5g015480 | 43.089 | 123 | 66 | 3 | 10 | 129 | 56 | 177 | 7.99e-17 | 81.6 |
MS.gene074431.t1 | MTR_7g446510 | 29.412 | 170 | 120 | 0 | 69 | 238 | 140 | 309 | 6.60e-16 | 80.1 |
MS.gene074431.t1 | MTR_5g076070 | 24.454 | 229 | 168 | 3 | 13 | 238 | 56 | 282 | 1.19e-15 | 78.6 |
MS.gene074431.t1 | MTR_2g070590 | 42.453 | 106 | 57 | 3 | 10 | 112 | 17 | 121 | 3.81e-15 | 72.8 |
MS.gene074431.t1 | MTR_7g113010 | 40.157 | 127 | 60 | 3 | 10 | 134 | 457 | 569 | 1.54e-14 | 77.8 |
MS.gene074431.t1 | MTR_1g013060 | 27.189 | 217 | 151 | 4 | 1 | 211 | 15 | 230 | 1.60e-14 | 73.9 |
MS.gene074431.t1 | MTR_7g446520 | 25.446 | 224 | 152 | 1 | 16 | 239 | 94 | 302 | 2.07e-14 | 75.5 |
MS.gene074431.t1 | MTR_2g099430 | 46.591 | 88 | 45 | 2 | 33 | 119 | 26 | 112 | 2.28e-14 | 70.5 |
MS.gene074431.t1 | MTR_6g022070 | 28.571 | 175 | 118 | 4 | 284 | 457 | 1 | 169 | 2.51e-14 | 75.5 |
MS.gene074431.t1 | MTR_7g446480 | 30.921 | 152 | 105 | 0 | 87 | 238 | 143 | 294 | 2.57e-14 | 75.1 |
MS.gene074431.t1 | MTR_4g035820 | 25.312 | 320 | 200 | 10 | 10 | 299 | 75 | 385 | 1.43e-13 | 74.7 |
MS.gene074431.t1 | MTR_5g045210 | 32.203 | 118 | 73 | 2 | 525 | 636 | 20 | 136 | 1.93e-13 | 70.1 |
MS.gene074431.t1 | MTR_4g117620 | 84.848 | 33 | 5 | 0 | 672 | 704 | 35 | 67 | 2.41e-13 | 66.2 |
MS.gene074431.t1 | MTR_0337s0040 | 27.778 | 144 | 102 | 1 | 76 | 217 | 81 | 224 | 4.41e-13 | 69.7 |
MS.gene074431.t1 | MTR_1g019850 | 31.915 | 141 | 87 | 3 | 3 | 141 | 63 | 196 | 1.28e-12 | 68.6 |
MS.gene074431.t1 | MTR_2g014100 | 25.359 | 209 | 133 | 5 | 3 | 191 | 40 | 245 | 2.28e-12 | 68.2 |
MS.gene074431.t1 | MTR_1g086270 | 28.125 | 128 | 73 | 2 | 284 | 411 | 1 | 109 | 9.44e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene074431.t1 | AT4G38180 | 31.185 | 574 | 366 | 9 | 7 | 554 | 70 | 640 | 6.17e-92 | 304 |
MS.gene074431.t1 | AT4G15090 | 27.451 | 612 | 413 | 8 | 3 | 591 | 44 | 647 | 7.79e-85 | 285 |
MS.gene074431.t1 | AT4G15090 | 27.451 | 612 | 413 | 8 | 3 | 591 | 44 | 647 | 7.79e-85 | 285 |
MS.gene074431.t1 | AT4G15090 | 27.451 | 612 | 413 | 8 | 3 | 591 | 44 | 647 | 7.79e-85 | 285 |
MS.gene074431.t1 | AT4G15090 | 27.451 | 612 | 413 | 8 | 3 | 591 | 44 | 647 | 7.79e-85 | 285 |
MS.gene074431.t1 | AT4G15090 | 27.451 | 612 | 413 | 8 | 3 | 591 | 44 | 647 | 7.79e-85 | 285 |
MS.gene074431.t1 | AT1G76320 | 28.929 | 560 | 357 | 10 | 14 | 548 | 1 | 544 | 2.77e-72 | 248 |
MS.gene074431.t1 | AT1G76320 | 28.929 | 560 | 357 | 10 | 14 | 548 | 1 | 544 | 5.92e-72 | 248 |
MS.gene074431.t1 | AT1G76320 | 28.929 | 560 | 357 | 10 | 14 | 548 | 1 | 544 | 8.57e-72 | 248 |
MS.gene074431.t1 | AT1G76320 | 28.929 | 560 | 357 | 10 | 14 | 548 | 1 | 544 | 8.57e-72 | 248 |
MS.gene074431.t1 | AT3G22170 | 27.724 | 624 | 373 | 13 | 9 | 591 | 69 | 655 | 2.17e-70 | 246 |
MS.gene074431.t1 | AT3G22170 | 27.724 | 624 | 373 | 13 | 9 | 591 | 69 | 655 | 2.17e-70 | 246 |
MS.gene074431.t1 | AT3G06250 | 26.281 | 605 | 374 | 11 | 9 | 589 | 189 | 745 | 6.86e-69 | 241 |
MS.gene074431.t1 | AT3G06250 | 35.780 | 109 | 54 | 3 | 4 | 110 | 22 | 116 | 8.08e-12 | 69.3 |
MS.gene074431.t1 | AT3G06250 | 26.281 | 605 | 374 | 11 | 9 | 589 | 189 | 745 | 6.86e-69 | 241 |
MS.gene074431.t1 | AT3G06250 | 35.780 | 109 | 54 | 3 | 4 | 110 | 22 | 116 | 8.08e-12 | 69.3 |
MS.gene074431.t1 | AT3G06250 | 26.281 | 605 | 374 | 11 | 9 | 589 | 189 | 745 | 6.86e-69 | 241 |
MS.gene074431.t1 | AT3G06250 | 35.780 | 109 | 54 | 3 | 4 | 110 | 22 | 116 | 8.08e-12 | 69.3 |
MS.gene074431.t1 | AT5G18960 | 26.194 | 607 | 375 | 13 | 9 | 589 | 210 | 769 | 5.04e-65 | 230 |
MS.gene074431.t1 | AT5G18960 | 36.842 | 114 | 52 | 4 | 9 | 116 | 42 | 141 | 3.14e-12 | 70.5 |
MS.gene074431.t1 | AT5G18960 | 26.194 | 607 | 375 | 13 | 9 | 589 | 210 | 769 | 5.04e-65 | 230 |
MS.gene074431.t1 | AT5G18960 | 36.842 | 114 | 52 | 4 | 9 | 116 | 42 | 141 | 3.14e-12 | 70.5 |
MS.gene074431.t1 | AT2G27110 | 26.689 | 592 | 379 | 12 | 9 | 576 | 48 | 608 | 2.93e-58 | 212 |
MS.gene074431.t1 | AT2G27110 | 26.689 | 592 | 379 | 12 | 9 | 576 | 48 | 608 | 2.93e-58 | 212 |
MS.gene074431.t1 | AT4G19990 | 25.597 | 586 | 362 | 9 | 13 | 561 | 24 | 572 | 1.80e-54 | 200 |
MS.gene074431.t1 | AT4G19990 | 25.597 | 586 | 362 | 9 | 13 | 561 | 24 | 572 | 1.80e-54 | 200 |
MS.gene074431.t1 | AT4G19990 | 25.554 | 587 | 363 | 9 | 13 | 562 | 24 | 573 | 2.54e-54 | 199 |
MS.gene074431.t1 | AT4G19990 | 25.554 | 587 | 363 | 9 | 13 | 562 | 38 | 587 | 2.91e-54 | 200 |
MS.gene074431.t1 | AT4G19990 | 25.383 | 587 | 364 | 9 | 13 | 562 | 24 | 573 | 3.40e-54 | 199 |
MS.gene074431.t1 | AT4G19990 | 25.383 | 587 | 364 | 9 | 13 | 562 | 24 | 573 | 3.40e-54 | 199 |
MS.gene074431.t1 | AT4G38170 | 27.716 | 451 | 275 | 10 | 190 | 607 | 24 | 456 | 8.40e-53 | 192 |
MS.gene074431.t1 | AT2G32250 | 24.961 | 645 | 389 | 15 | 13 | 626 | 41 | 621 | 1.40e-52 | 195 |
MS.gene074431.t1 | AT2G32250 | 24.961 | 645 | 389 | 15 | 13 | 626 | 41 | 621 | 1.40e-52 | 195 |
MS.gene074431.t1 | AT2G32250 | 24.961 | 645 | 389 | 15 | 13 | 626 | 41 | 621 | 1.40e-52 | 195 |
MS.gene074431.t1 | AT2G32250 | 24.961 | 645 | 389 | 15 | 13 | 626 | 41 | 621 | 1.61e-52 | 195 |
MS.gene074431.t1 | AT2G32250 | 24.961 | 645 | 389 | 15 | 13 | 626 | 41 | 621 | 1.61e-52 | 195 |
MS.gene074431.t1 | AT2G32250 | 24.961 | 645 | 389 | 15 | 13 | 626 | 41 | 621 | 1.61e-52 | 195 |
MS.gene074431.t1 | AT2G32250 | 24.845 | 644 | 389 | 15 | 14 | 626 | 1 | 580 | 7.33e-52 | 193 |
MS.gene074431.t1 | AT2G32250 | 24.845 | 644 | 389 | 15 | 14 | 626 | 1 | 580 | 8.38e-52 | 192 |
MS.gene074431.t1 | AT1G52520 | 25.739 | 575 | 370 | 15 | 10 | 548 | 85 | 638 | 3.13e-51 | 190 |
MS.gene074431.t1 | AT4G19990 | 26.265 | 514 | 318 | 7 | 73 | 562 | 40 | 516 | 2.27e-50 | 187 |
MS.gene074431.t1 | AT2G27110 | 27.913 | 412 | 272 | 6 | 187 | 576 | 55 | 463 | 1.68e-49 | 185 |
MS.gene074431.t1 | AT1G10240 | 25.219 | 571 | 378 | 14 | 10 | 545 | 48 | 604 | 4.38e-45 | 172 |
MS.gene074431.t1 | AT1G10240 | 25.219 | 571 | 378 | 14 | 10 | 545 | 48 | 604 | 4.38e-45 | 172 |
MS.gene074431.t1 | AT1G80010 | 24.237 | 590 | 399 | 12 | 10 | 561 | 95 | 674 | 7.53e-45 | 172 |
MS.gene074431.t1 | AT5G28530 | 21.782 | 606 | 408 | 11 | 5 | 563 | 50 | 636 | 6.58e-39 | 154 |
MS.gene074431.t1 | AT5G28530 | 22.549 | 612 | 392 | 14 | 5 | 563 | 50 | 632 | 4.14e-38 | 151 |
MS.gene074431.t1 | AT5G28530 | 22.549 | 612 | 392 | 14 | 5 | 563 | 50 | 632 | 4.14e-38 | 151 |
MS.gene074431.t1 | AT5G28530 | 21.291 | 573 | 388 | 11 | 5 | 563 | 50 | 573 | 3.44e-33 | 136 |
MS.gene074431.t1 | AT5G28530 | 22.107 | 579 | 372 | 14 | 5 | 563 | 50 | 569 | 2.07e-32 | 133 |
Find 122 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATAGAGGTTCAGTCATATT+TGG | 0.138638 | 8.2:-73920113 | MS.gene074431:intron |
TGGAAGAGGCTAGTAAATTT+TGG | 0.221773 | 8.2:-73920830 | MS.gene074431:CDS |
CAAAATGGTTGAAGAATTCT+AGG | 0.231129 | 8.2:+73919613 | None:intergenic |
GTGTGATGCACATATGATTT+TGG | 0.240616 | 8.2:-73920232 | MS.gene074431:CDS |
TCAAATCCCATTCCAATCTT+TGG | 0.252212 | 8.2:+73920858 | None:intergenic |
CGTCAACAACTATTTCAAAA+TGG | 0.269973 | 8.2:+73919598 | None:intergenic |
TGTAGGAAGTTTGATACTTT+TGG | 0.276531 | 8.2:-73919300 | MS.gene074431:CDS |
ACATCCGAACTCACAATTTC+TGG | 0.277637 | 8.2:+73918952 | None:intergenic |
GTTGTTTGATACATTCTTAC+AGG | 0.280157 | 8.2:-73920048 | MS.gene074431:CDS |
TTAATATTCATGACAAATCT+TGG | 0.288875 | 8.2:-73919776 | MS.gene074431:CDS |
ATAGAGGTTCAGTCATATTT+GGG | 0.289957 | 8.2:-73920112 | MS.gene074431:intron |
TTATGCAAGCAAAGGGGTTC+AGG | 0.309393 | 8.2:-73918930 | MS.gene074431:CDS |
TTGTTATTAATGTAGGCAAT+AGG | 0.319287 | 8.2:-73918396 | MS.gene074431:intron |
TGCATTCATTCCATTCAAAT+AGG | 0.320332 | 8.2:+73918365 | None:intergenic |
ACATGGCATTTGTTACAAAA+TGG | 0.322826 | 8.2:-73919924 | MS.gene074431:CDS |
TGGCTAATGACTCTGGATTA+AGG | 0.326845 | 8.2:-73920482 | MS.gene074431:CDS |
TGGAATGGGATTTGATTCTA+TGG | 0.332757 | 8.2:-73920850 | MS.gene074431:CDS |
AACATATTACAAATGTGTTT+TGG | 0.337041 | 8.2:-73920254 | MS.gene074431:CDS |
TCGCTTAATTCTCTTTGAAC+CGG | 0.337380 | 8.2:+73918900 | None:intergenic |
CCATTGCCATTGCTTGATCT+TGG | 0.339035 | 8.2:+73919988 | None:intergenic |
TGTTATTAATGTAGGCAATA+GGG | 0.344986 | 8.2:-73918395 | MS.gene074431:intron |
TGGCTCAAGTTTCTTGATAA+TGG | 0.349009 | 8.2:-73919051 | MS.gene074431:CDS |
ATTCGATTTCTAGACAAGTT+AGG | 0.350154 | 8.2:+73919135 | None:intergenic |
CAAAATGGAGTTAAACATCT+TGG | 0.359049 | 8.2:-73919909 | MS.gene074431:CDS |
ATTCCATCACTTGTAGTTGT+AGG | 0.360190 | 8.2:-73919317 | MS.gene074431:CDS |
TGTCATGAATATTAAATTTG+TGG | 0.368037 | 8.2:+73919784 | None:intergenic |
TGGTCAGTGAAGATTGTCTT+TGG | 0.368243 | 8.2:+73920008 | None:intergenic |
GAGTCAGATTCATGTCTAAT+TGG | 0.376263 | 8.2:+73919411 | None:intergenic |
AACTTGAGCCATTCTTCCTT+GGG | 0.383639 | 8.2:+73919063 | None:intergenic |
AAACTTGAGCCATTCTTCCT+TGG | 0.386061 | 8.2:+73919062 | None:intergenic |
TTTAGGGGAAGGGAGGTTGA+AGG | 0.387913 | 8.2:-73919162 | MS.gene074431:CDS |
TCTCTGAAATTTGTAGATCA+TGG | 0.390016 | 8.2:+73920565 | None:intergenic |
TGACATGTTCAAGAAAATAA+TGG | 0.392454 | 8.2:-73919022 | MS.gene074431:CDS |
ATCTTGCACAACGCCATAAC+GGG | 0.394237 | 8.2:+73919185 | None:intergenic |
ATGTCGATTGGTTTGTTGTA+AGG | 0.397901 | 8.2:-73920730 | MS.gene074431:CDS |
TGCACCAATACTAATCCAAA+TGG | 0.399541 | 8.2:-73919505 | MS.gene074431:CDS |
GCAAGCATATGAGATTGATT+TGG | 0.403796 | 8.2:-73920502 | MS.gene074431:CDS |
ATGGACAATAACGGTGATAA+TGG | 0.410451 | 8.2:-73918982 | MS.gene074431:CDS |
CTTGATCCTCATGAACTTGT+GGG | 0.416691 | 8.2:+73918512 | None:intergenic |
ATTACACTTTCTCGTAAGAA+TGG | 0.418220 | 8.2:-73920624 | MS.gene074431:CDS |
TTTCCCATTTGGATTAGTAT+TGG | 0.423123 | 8.2:+73919501 | None:intergenic |
ATTGATTTGGCTAATGACTC+TGG | 0.429637 | 8.2:-73920489 | MS.gene074431:CDS |
GTTTGAATTGAATGATGTTA+AGG | 0.437617 | 8.2:-73919250 | MS.gene074431:CDS |
AAAATGGAGTTAAACATCTT+GGG | 0.438747 | 8.2:-73919908 | MS.gene074431:CDS |
AGTATGGCGTATGGCGAGAT+TGG | 0.439808 | 8.2:-73920354 | MS.gene074431:CDS |
TGGCATCTTCAGATGATGAT+TGG | 0.443033 | 8.2:-73920884 | MS.gene074431:CDS |
GATGATTGGAAACCAAAGAT+TGG | 0.443445 | 8.2:-73920870 | MS.gene074431:CDS |
TGGAAACCAAAGATTGGAAT+GGG | 0.444346 | 8.2:-73920864 | MS.gene074431:CDS |
GCTTGCTTATAGTTTCCGTA+TGG | 0.448607 | 8.2:-73920808 | MS.gene074431:CDS |
CGCTTAATTCTCTTTGAACC+GGG | 0.451079 | 8.2:+73918901 | None:intergenic |
AGGCAAAACATGAAGGATCT+TGG | 0.451476 | 8.2:-73919365 | MS.gene074431:CDS |
TTCATTCCATTCAAATAGGT+TGG | 0.457017 | 8.2:+73918369 | None:intergenic |
TAAGCGACACAAAAGTTGTC+TGG | 0.459328 | 8.2:-73918884 | MS.gene074431:CDS |
AGACAAGTGAGTCATTTAGA+TGG | 0.469670 | 8.2:-73920070 | MS.gene074431:CDS |
GTTGTAAGGAAGGGCTAAAG+AGG | 0.472997 | 8.2:-73920716 | MS.gene074431:CDS |
GGAACTTCACGCACAAGCTA+TGG | 0.478357 | 8.2:-73919001 | MS.gene074431:CDS |
TTCTCGTAAGAATGGAAAGT+TGG | 0.483302 | 8.2:-73920616 | MS.gene074431:CDS |
CAGAGACAACACACATGCTT+CGG | 0.486204 | 8.2:-73920548 | MS.gene074431:CDS |
TTGAATGGAATGAATGCATA+GGG | 0.487076 | 8.2:-73918360 | None:intergenic |
CAATTACACAGCCATGCTAA+TGG | 0.488206 | 8.2:-73918488 | MS.gene074431:intron |
TCGTCCAGAAATTGTGAGTT+CGG | 0.488854 | 8.2:-73918956 | MS.gene074431:CDS |
GGGATTTGATTCTATGGAAG+AGG | 0.495105 | 8.2:-73920844 | MS.gene074431:CDS |
ATGGGCTGCATGTTATATGA+AGG | 0.495383 | 8.2:-73919724 | MS.gene074431:CDS |
TGGACAAGAGAAGCCCGTTA+TGG | 0.496786 | 8.2:-73919198 | MS.gene074431:CDS |
TCGGATGTTATGCAAGCAAA+GGG | 0.497034 | 8.2:-73918937 | MS.gene074431:CDS |
AATCTTGCACAACGCCATAA+CGG | 0.497648 | 8.2:+73919184 | None:intergenic |
GAGAAAAGATATGCATATGA+AGG | 0.500242 | 8.2:-73920690 | MS.gene074431:CDS |
CTCTAACTTCGAAGCCCATA+CGG | 0.502833 | 8.2:+73920793 | None:intergenic |
TAAGGAAGGGCTAAAGAGGA+AGG | 0.502968 | 8.2:-73920712 | MS.gene074431:CDS |
CGATTGGTTTGTTGTAAGGA+AGG | 0.503555 | 8.2:-73920726 | MS.gene074431:CDS |
GTTATTAATGTAGGCAATAG+GGG | 0.504103 | 8.2:-73918394 | MS.gene074431:intron |
AAGCATCACCCAAGGAAGAA+TGG | 0.505676 | 8.2:-73919071 | MS.gene074431:CDS |
CTTCTTTCATGCATATCAGA+TGG | 0.507409 | 8.2:-73920286 | MS.gene074431:CDS |
ACTTGATCCTCATGAACTTG+TGG | 0.509737 | 8.2:+73918511 | None:intergenic |
CATAAACCATGATGAGTCTT+GGG | 0.511448 | 8.2:+73919948 | None:intergenic |
TATGTTTGTCTTCAAAGTCA+TGG | 0.512296 | 8.2:+73920589 | None:intergenic |
CTTGCTTATAGTTTCCGTAT+GGG | 0.515014 | 8.2:-73920807 | MS.gene074431:CDS |
AATTCTAGGATATTCACATT+CGG | 0.515042 | 8.2:+73919627 | None:intergenic |
CTTCCTACAACTACAAGTGA+TGG | 0.523835 | 8.2:+73919314 | None:intergenic |
GCGAGATTGGATGTCTTTCA+CGG | 0.526117 | 8.2:-73920341 | MS.gene074431:CDS |
CAACTTATGAGCACACAAGC+AGG | 0.527478 | 8.2:-73920444 | MS.gene074431:CDS |
GCACCAATACTAATCCAAAT+GGG | 0.528421 | 8.2:-73919504 | MS.gene074431:CDS |
CTCATCATGGTTTATGCACA+TGG | 0.528564 | 8.2:-73919941 | MS.gene074431:CDS |
TATGCAAGCAAAGGGGTTCA+GGG | 0.531086 | 8.2:-73918929 | MS.gene074431:CDS |
TTGGAAACCAAAGATTGGAA+TGG | 0.532585 | 8.2:-73920865 | MS.gene074431:CDS |
CATCTGATATGCATGAAAGA+AGG | 0.541375 | 8.2:+73920287 | None:intergenic |
GCATAAACCATGATGAGTCT+TGG | 0.546029 | 8.2:+73919947 | None:intergenic |
AATCCTCACATAAGCTTGCA+AGG | 0.553450 | 8.2:-73919542 | MS.gene074431:CDS |
TAGTGTATCGTCATGTCGAT+TGG | 0.553968 | 8.2:-73920742 | MS.gene074431:CDS |
TTGATCCTCATGAACTTGTG+GGG | 0.556767 | 8.2:+73918513 | None:intergenic |
GAGAAAGTGTAATTCTTGCA+AGG | 0.558104 | 8.2:+73920634 | None:intergenic |
TTTGAATGGAATGAATGCAT+AGG | 0.559346 | 8.2:-73918361 | None:intergenic |
TTCGGATGTTATGCAAGCAA+AGG | 0.563515 | 8.2:-73918938 | MS.gene074431:CDS |
TGTCTCTAAGTTCATTAAAG+CGG | 0.564647 | 8.2:-73919100 | MS.gene074431:CDS |
TTATTAATGTAGGCAATAGG+GGG | 0.573008 | 8.2:-73918393 | MS.gene074431:intron |
ATCACTGAGGCAAAACATGA+AGG | 0.573756 | 8.2:-73919372 | MS.gene074431:CDS |
GATTGGTTTGTTGTAAGGAA+GGG | 0.585108 | 8.2:-73920725 | MS.gene074431:CDS |
GCAGGGCATAGAGCTAATGT+TGG | 0.587433 | 8.2:-73920426 | MS.gene074431:CDS |
ATGAAGGGAGTGTTAACACT+TGG | 0.588039 | 8.2:-73919708 | MS.gene074431:CDS |
TGATCCTCATGAACTTGTGG+GGG | 0.590826 | 8.2:+73918514 | None:intergenic |
CATCTTGGGAACTTGATGAC+GGG | 0.592368 | 8.2:-73919894 | MS.gene074431:CDS |
ACATCTTGGGAACTTGATGA+CGG | 0.592717 | 8.2:-73919895 | MS.gene074431:CDS |
TGATATGCATGAAAGAAGGA+TGG | 0.595909 | 8.2:+73920291 | None:intergenic |
AAGGCAATTTGTTCTAACAT+CGG | 0.596957 | 8.2:+73920653 | None:intergenic |
AACTTATGAGCACACAAGCA+GGG | 0.601558 | 8.2:-73920443 | MS.gene074431:CDS |
GTGATGCCCAAGACTCATCA+TGG | 0.604328 | 8.2:-73919954 | MS.gene074431:CDS |
GCACAAGCTATGGACAATAA+CGG | 0.605835 | 8.2:-73918991 | MS.gene074431:CDS |
TGGGCTGCATGTTATATGAA+GGG | 0.616662 | 8.2:-73919723 | MS.gene074431:CDS |
CACTGACCAAGATCAAGCAA+TGG | 0.631892 | 8.2:-73919994 | MS.gene074431:CDS |
GGCAACTGAAGCATCACCCA+AGG | 0.632035 | 8.2:-73919079 | MS.gene074431:CDS |
CCAAGATCAAGCAATGGCAA+TGG | 0.635028 | 8.2:-73919988 | MS.gene074431:CDS |
AAGGGGTTCAGGGTACGACC+CGG | 0.640993 | 8.2:-73918919 | MS.gene074431:CDS |
AGCTAATGTTGGATTTACAG+AGG | 0.647899 | 8.2:-73920415 | MS.gene074431:CDS |
TAACCTTGCAAGCTTATGTG+AGG | 0.649097 | 8.2:+73919539 | None:intergenic |
CTTGGGAACTTGATGACGGG+AGG | 0.649703 | 8.2:-73919891 | MS.gene074431:CDS |
TAGAGGTTCAGTCATATTTG+GGG | 0.661113 | 8.2:-73920111 | MS.gene074431:CDS |
TAATGTTGGATTTACAGAGG+TGG | 0.664199 | 8.2:-73920412 | MS.gene074431:CDS |
TATTAATGTAGGCAATAGGG+GGG | 0.692237 | 8.2:-73918392 | MS.gene074431:intron |
CGGATGTTATGCAAGCAAAG+GGG | 0.705294 | 8.2:-73918936 | MS.gene074431:CDS |
AAGTGATGGAATTTGAAACA+CGG | 0.715996 | 8.2:+73919328 | None:intergenic |
TGAATGGAATGAATGCATAG+GGG | 0.716012 | 8.2:-73918359 | None:intergenic |
TTGTGAATATGTCATCACTG+AGG | 0.762460 | 8.2:-73919385 | MS.gene074431:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTTCAAAAACAAATTCATA+AGG | - | chr8.2:73920784-73920803 | MS.gene074431:CDS | 15.0% |
!! | TTATGAGCTTAAAAAAAAAT+GGG | - | chr8.2:73919505-73919524 | MS.gene074431:CDS | 15.0% |
!!! | ATAACTATATTTTAAAAAGG+TGG | - | chr8.2:73920029-73920048 | MS.gene074431:CDS | 15.0% |
!!! | CTGATAACTATATTTTAAAA+AGG | - | chr8.2:73920026-73920045 | MS.gene074431:CDS | 15.0% |
!!! | CTTTTTAAAATATAGTTATC+AGG | + | chr8.2:73920028-73920047 | None:intergenic | 15.0% |
!!! | TAATTTGACATAATCATTTT+AGG | - | chr8.2:73920672-73920691 | MS.gene074431:CDS | 15.0% |
!!! | TGTTTTAATTTTACTTGTTT+TGG | - | chr8.2:73920471-73920490 | MS.gene074431:CDS | 15.0% |
!!! | TTTTAAGTTGTTATTAATGT+AGG | - | chr8.2:73920844-73920863 | MS.gene074431:CDS | 15.0% |
!! | CTTATGAGCTTAAAAAAAAA+TGG | - | chr8.2:73919504-73919523 | MS.gene074431:CDS | 20.0% |
!! | TGTCATGAATATTAAATTTG+TGG | + | chr8.2:73919466-73919485 | None:intergenic | 20.0% |
!! | TTAATATTCATGACAAATCT+TGG | - | chr8.2:73919471-73919490 | MS.gene074431:CDS | 20.0% |
!! | TTCGTAAACAAAAAAAAAGA+TGG | - | chr8.2:73918482-73918501 | MS.gene074431:intron | 20.0% |
!!! | AACATATTACAAATGTGTTT+TGG | - | chr8.2:73918993-73919012 | MS.gene074431:CDS | 20.0% |
! | AAAATGGAGTTAAACATCTT+GGG | - | chr8.2:73919339-73919358 | MS.gene074431:CDS | 25.0% |
! | CTAAGATACATGTAAAATCA+TGG | + | chr8.2:73920647-73920666 | None:intergenic | 25.0% |
! | GTTTGAATTGAATGATGTTA+AGG | - | chr8.2:73919997-73920016 | MS.gene074431:CDS | 25.0% |
! | TGACATGTTCAAGAAAATAA+TGG | - | chr8.2:73920225-73920244 | MS.gene074431:CDS | 25.0% |
! | TGTTATTAATGTAGGCAATA+GGG | - | chr8.2:73920852-73920871 | MS.gene074431:CDS | 25.0% |
!! | TTGTTATTAATGTAGGCAAT+AGG | - | chr8.2:73920851-73920870 | MS.gene074431:CDS | 25.0% |
!!! | AAGCATATTTTGAGATACTT+TGG | - | chr8.2:73919429-73919448 | MS.gene074431:CDS | 25.0% |
!!! | AATTCTAGGATATTCACATT+CGG | + | chr8.2:73919623-73919642 | None:intergenic | 25.0% |
!!! | ACATAATCATTTTAGGTTGA+TGG | - | chr8.2:73920679-73920698 | MS.gene074431:CDS | 25.0% |
!!! | TTTTGAAATTACCATTAGCA+TGG | + | chr8.2:73920773-73920792 | None:intergenic | 25.0% |
AACCAGAAAAAAAAAGCAAG+TGG | + | chr8.2:73919106-73919125 | None:intergenic | 30.0% | |
ACCTAAAGAAAAAAGTTCAC+AGG | - | chr8.2:73920423-73920442 | MS.gene074431:CDS | 30.0% | |
ATAGAGGTTCAGTCATATTT+GGG | - | chr8.2:73919135-73919154 | MS.gene074431:CDS | 30.0% | |
ATATGACTGAACCTCTATAA+TGG | + | chr8.2:73919133-73919152 | None:intergenic | 30.0% | |
ATTACACTTTCTCGTAAGAA+TGG | - | chr8.2:73918623-73918642 | MS.gene074431:intron | 30.0% | |
CAAAATGGAGTTAAACATCT+TGG | - | chr8.2:73919338-73919357 | MS.gene074431:CDS | 30.0% | |
CAAAATGGTTGAAGAATTCT+AGG | + | chr8.2:73919637-73919656 | None:intergenic | 30.0% | |
CGTCAACAACTATTTCAAAA+TGG | + | chr8.2:73919652-73919671 | None:intergenic | 30.0% | |
GAGAAAAGATATGCATATGA+AGG | - | chr8.2:73918557-73918576 | MS.gene074431:intron | 30.0% | |
GTTATTAATGTAGGCAATAG+GGG | - | chr8.2:73920853-73920872 | MS.gene074431:CDS | 30.0% | |
GTTGTTTGATACATTCTTAC+AGG | - | chr8.2:73919199-73919218 | MS.gene074431:CDS | 30.0% | |
TATAGAGGTTCAGTCATATT+TGG | - | chr8.2:73919134-73919153 | MS.gene074431:CDS | 30.0% | |
TATGTTTGTCTTCAAAGTCA+TGG | + | chr8.2:73918661-73918680 | None:intergenic | 30.0% | |
TGAGAGAAGAAAAAGAAGTA+TGG | - | chr8.2:73918877-73918896 | MS.gene074431:CDS | 30.0% | |
TGCATTCATTCCATTCAAAT+AGG | + | chr8.2:73920885-73920904 | None:intergenic | 30.0% | |
TGTCTCTAAGTTCATTAAAG+CGG | - | chr8.2:73920147-73920166 | MS.gene074431:intron | 30.0% | |
TTATTAATGTAGGCAATAGG+GGG | - | chr8.2:73920854-73920873 | MS.gene074431:CDS | 30.0% | |
TTCATTCCATTCAAATAGGT+TGG | + | chr8.2:73920881-73920900 | None:intergenic | 30.0% | |
! | AAGGCAATTTGTTCTAACAT+CGG | + | chr8.2:73918597-73918616 | None:intergenic | 30.0% |
! | AAGTGATGGAATTTGAAACA+CGG | + | chr8.2:73919922-73919941 | None:intergenic | 30.0% |
! | ACATGGCATTTGTTACAAAA+TGG | - | chr8.2:73919323-73919342 | MS.gene074431:CDS | 30.0% |
! | ATTCGATTTCTAGACAAGTT+AGG | + | chr8.2:73920115-73920134 | None:intergenic | 30.0% |
! | ATTTTGGATTACGGGTATTT+TGG | - | chr8.2:73919031-73919050 | MS.gene074431:CDS | 30.0% |
! | CACATATGATTTTGGATTAC+GGG | - | chr8.2:73919023-73919042 | MS.gene074431:CDS | 30.0% |
! | GCACATATGATTTTGGATTA+CGG | - | chr8.2:73919022-73919041 | MS.gene074431:CDS | 30.0% |
! | GTATTTTCAACGACAATTGT+TGG | - | chr8.2:73918928-73918947 | MS.gene074431:CDS | 30.0% |
! | GTGTGTATATTTTTCCCATT+TGG | + | chr8.2:73919760-73919779 | None:intergenic | 30.0% |
! | TGTAGGAAGTTTGATACTTT+TGG | - | chr8.2:73919947-73919966 | MS.gene074431:CDS | 30.0% |
!! | TCTCTGAAATTTGTAGATCA+TGG | + | chr8.2:73918685-73918704 | None:intergenic | 30.0% |
!! | TTTCCCATTTGGATTAGTAT+TGG | + | chr8.2:73919749-73919768 | None:intergenic | 30.0% |
!!! | ACCTGTGAACTTTTTTCTTT+AGG | + | chr8.2:73920427-73920446 | None:intergenic | 30.0% |
!!! | TGTGAACTTTTTTCTTTAGG+TGG | + | chr8.2:73920424-73920443 | None:intergenic | 30.0% |
AAAAAAAGCAAGTGGCCTAT+TGG | + | chr8.2:73919098-73919117 | None:intergenic | 35.0% | |
AAGTTCACAGGTATATGAGT+TGG | - | chr8.2:73920435-73920454 | MS.gene074431:CDS | 35.0% | |
AGACAAGTGAGTCATTTAGA+TGG | - | chr8.2:73919177-73919196 | MS.gene074431:CDS | 35.0% | |
AGCTAATGTTGGATTTACAG+AGG | - | chr8.2:73918832-73918851 | MS.gene074431:CDS | 35.0% | |
ATGCAGTAGCAGAAAATAGA+TGG | + | chr8.2:73920504-73920523 | None:intergenic | 35.0% | |
ATGGACAATAACGGTGATAA+TGG | - | chr8.2:73920265-73920284 | MS.gene074431:CDS | 35.0% | |
ATTCCATCACTTGTAGTTGT+AGG | - | chr8.2:73919930-73919949 | MS.gene074431:CDS | 35.0% | |
CATAAACCATGATGAGTCTT+GGG | + | chr8.2:73919302-73919321 | None:intergenic | 35.0% | |
CATCTGATATGCATGAAAGA+AGG | + | chr8.2:73918963-73918982 | None:intergenic | 35.0% | |
CTTCTTTCATGCATATCAGA+TGG | - | chr8.2:73918961-73918980 | MS.gene074431:CDS | 35.0% | |
CTTGCTTATAGTTTCCGTAT+GGG | - | chr8.2:73918440-73918459 | MS.gene074431:intron | 35.0% | |
GAGTCAGATTCATGTCTAAT+TGG | + | chr8.2:73919839-73919858 | None:intergenic | 35.0% | |
GATGATTGGAAACCAAAGAT+TGG | - | chr8.2:73918377-73918396 | MS.gene074431:CDS | 35.0% | |
GCAAGCATATGAGATTGATT+TGG | - | chr8.2:73918745-73918764 | MS.gene074431:intron | 35.0% | |
GCACCAATACTAATCCAAAT+GGG | - | chr8.2:73919743-73919762 | MS.gene074431:CDS | 35.0% | |
TAATGTTGGATTTACAGAGG+TGG | - | chr8.2:73918835-73918854 | MS.gene074431:CDS | 35.0% | |
TAGAGGTTCAGTCATATTTG+GGG | - | chr8.2:73919136-73919155 | MS.gene074431:CDS | 35.0% | |
TATTAATGTAGGCAATAGGG+GGG | - | chr8.2:73920855-73920874 | MS.gene074431:CDS | 35.0% | |
TCAAATCCCATTCCAATCTT+TGG | + | chr8.2:73918392-73918411 | None:intergenic | 35.0% | |
TCGCTTAATTCTCTTTGAAC+CGG | + | chr8.2:73920350-73920369 | None:intergenic | 35.0% | |
TGATATGCATGAAAGAAGGA+TGG | + | chr8.2:73918959-73918978 | None:intergenic | 35.0% | |
TGCACCAATACTAATCCAAA+TGG | - | chr8.2:73919742-73919761 | MS.gene074431:CDS | 35.0% | |
TGGAAACCAAAGATTGGAAT+GGG | - | chr8.2:73918383-73918402 | MS.gene074431:CDS | 35.0% | |
TGGAATGGGATTTGATTCTA+TGG | - | chr8.2:73918397-73918416 | MS.gene074431:intron | 35.0% | |
TGGCTCAAGTTTCTTGATAA+TGG | - | chr8.2:73920196-73920215 | MS.gene074431:CDS | 35.0% | |
TTCTCGTAAGAATGGAAAGT+TGG | - | chr8.2:73918631-73918650 | MS.gene074431:intron | 35.0% | |
TTGGAAACCAAAGATTGGAA+TGG | - | chr8.2:73918382-73918401 | MS.gene074431:CDS | 35.0% | |
TTGTGAATATGTCATCACTG+AGG | - | chr8.2:73919862-73919881 | MS.gene074431:CDS | 35.0% | |
! | AGAAAAAGAAGTATGGCGTA+TGG | - | chr8.2:73918884-73918903 | MS.gene074431:CDS | 35.0% |
! | GAGAAAGTGTAATTCTTGCA+AGG | + | chr8.2:73918616-73918635 | None:intergenic | 35.0% |
! | GTGTGATGCACATATGATTT+TGG | - | chr8.2:73919015-73919034 | MS.gene074431:CDS | 35.0% |
! | TCTGGTTTCAACCATTATAG+AGG | - | chr8.2:73919119-73919138 | MS.gene074431:CDS | 35.0% |
! | TGGAAGAGGCTAGTAAATTT+TGG | - | chr8.2:73918417-73918436 | MS.gene074431:intron | 35.0% |
!! | ATGTCGATTGGTTTGTTGTA+AGG | - | chr8.2:73918517-73918536 | MS.gene074431:CDS | 35.0% |
!! | ATTGATTTGGCTAATGACTC+TGG | - | chr8.2:73918758-73918777 | MS.gene074431:intron | 35.0% |
!! | GATTGGTTTGTTGTAAGGAA+GGG | - | chr8.2:73918522-73918541 | MS.gene074431:CDS | 35.0% |
!!! | TTTTGGCGATGTTGTTTCTT+TGG | - | chr8.2:73919048-73919067 | MS.gene074431:CDS | 35.0% |
AAACTTGAGCCATTCTTCCT+TGG | + | chr8.2:73920188-73920207 | None:intergenic | 40.0% | |
AACTTATGAGCACACAAGCA+GGG | - | chr8.2:73918804-73918823 | MS.gene074431:intron | 40.0% | |
AACTTGAGCCATTCTTCCTT+GGG | + | chr8.2:73920187-73920206 | None:intergenic | 40.0% | |
AATCCTCACATAAGCTTGCA+AGG | - | chr8.2:73919705-73919724 | MS.gene074431:CDS | 40.0% | |
AATCTTGCACAACGCCATAA+CGG | + | chr8.2:73920066-73920085 | None:intergenic | 40.0% | |
ACATCCGAACTCACAATTTC+TGG | + | chr8.2:73920298-73920317 | None:intergenic | 40.0% | |
ACATCTTGGGAACTTGATGA+CGG | - | chr8.2:73919352-73919371 | MS.gene074431:CDS | 40.0% | |
ACTTGATCCTCATGAACTTG+TGG | + | chr8.2:73920739-73920758 | None:intergenic | 40.0% | |
AGGCAAAACATGAAGGATCT+TGG | - | chr8.2:73919882-73919901 | MS.gene074431:CDS | 40.0% | |
ATCACTGAGGCAAAACATGA+AGG | - | chr8.2:73919875-73919894 | MS.gene074431:CDS | 40.0% | |
CAATTACACAGCCATGCTAA+TGG | - | chr8.2:73920759-73920778 | MS.gene074431:CDS | 40.0% | |
CGCTTAATTCTCTTTGAACC+GGG | + | chr8.2:73920349-73920368 | None:intergenic | 40.0% | |
CTCATCATGGTTTATGCACA+TGG | - | chr8.2:73919306-73919325 | MS.gene074431:CDS | 40.0% | |
CTTCCTACAACTACAAGTGA+TGG | + | chr8.2:73919936-73919955 | None:intergenic | 40.0% | |
CTTGATCCTCATGAACTTGT+GGG | + | chr8.2:73920738-73920757 | None:intergenic | 40.0% | |
GCACAAGCTATGGACAATAA+CGG | - | chr8.2:73920256-73920275 | MS.gene074431:CDS | 40.0% | |
GCATAAACCATGATGAGTCT+TGG | + | chr8.2:73919303-73919322 | None:intergenic | 40.0% | |
GCTTGCTTATAGTTTCCGTA+TGG | - | chr8.2:73918439-73918458 | MS.gene074431:intron | 40.0% | |
GGGATTTGATTCTATGGAAG+AGG | - | chr8.2:73918403-73918422 | MS.gene074431:intron | 40.0% | |
TAACCTTGCAAGCTTATGTG+AGG | + | chr8.2:73919711-73919730 | None:intergenic | 40.0% | |
TAAGCGACACAAAAGTTGTC+TGG | - | chr8.2:73920363-73920382 | MS.gene074431:CDS | 40.0% | |
TAGTGTATCGTCATGTCGAT+TGG | - | chr8.2:73918505-73918524 | MS.gene074431:CDS | 40.0% | |
TCGGATGTTATGCAAGCAAA+GGG | - | chr8.2:73920310-73920329 | MS.gene074431:CDS | 40.0% | |
TCGTCCAGAAATTGTGAGTT+CGG | - | chr8.2:73920291-73920310 | MS.gene074431:CDS | 40.0% | |
TGGCATCTTCAGATGATGAT+TGG | - | chr8.2:73918363-73918382 | MS.gene074431:CDS | 40.0% | |
TGGCTAATGACTCTGGATTA+AGG | - | chr8.2:73918765-73918784 | MS.gene074431:intron | 40.0% | |
TGGGCTGCATGTTATATGAA+GGG | - | chr8.2:73919524-73919543 | MS.gene074431:CDS | 40.0% | |
TGGTCAGTGAAGATTGTCTT+TGG | + | chr8.2:73919242-73919261 | None:intergenic | 40.0% | |
TTCGGATGTTATGCAAGCAA+AGG | - | chr8.2:73920309-73920328 | MS.gene074431:CDS | 40.0% | |
TTGATCCTCATGAACTTGTG+GGG | + | chr8.2:73920737-73920756 | None:intergenic | 40.0% | |
! | AAGCAATAGCAGCTTTGTCA+AGG | + | chr8.2:73920604-73920623 | None:intergenic | 40.0% |
! | ATGGCGTTGTGCAAGATTTT+AGG | - | chr8.2:73920068-73920087 | MS.gene074431:CDS | 40.0% |
! | ATGGGCTGCATGTTATATGA+AGG | - | chr8.2:73919523-73919542 | MS.gene074431:CDS | 40.0% |
! | TGGCGTTGTGCAAGATTTTA+GGG | - | chr8.2:73920069-73920088 | MS.gene074431:CDS | 40.0% |
!! | ATGAAGGGAGTGTTAACACT+TGG | - | chr8.2:73919539-73919558 | MS.gene074431:CDS | 40.0% |
!! | CGATTGGTTTGTTGTAAGGA+AGG | - | chr8.2:73918521-73918540 | MS.gene074431:CDS | 40.0% |
!! | TGTGCAAGATTTTAGGGGAA+GGG | - | chr8.2:73920075-73920094 | MS.gene074431:CDS | 40.0% |
!! | TTGTGCAAGATTTTAGGGGA+AGG | - | chr8.2:73920074-73920093 | MS.gene074431:CDS | 40.0% |
!!! | GGCCACTTGCTTTTTTTTTC+TGG | - | chr8.2:73919101-73919120 | MS.gene074431:CDS | 40.0% |
!!! | TTTTTTCTTTAGGTGGAGCG+CGG | + | chr8.2:73920417-73920436 | None:intergenic | 40.0% |
AAGCATCACCCAAGGAAGAA+TGG | - | chr8.2:73920176-73920195 | MS.gene074431:intron | 45.0% | |
ACTGTACCAACCATGCCAAT+AGG | - | chr8.2:73919080-73919099 | MS.gene074431:CDS | 45.0% | |
ATCTTGCACAACGCCATAAC+GGG | + | chr8.2:73920065-73920084 | None:intergenic | 45.0% | |
CAACTTATGAGCACACAAGC+AGG | - | chr8.2:73918803-73918822 | MS.gene074431:intron | 45.0% | |
CACTGACCAAGATCAAGCAA+TGG | - | chr8.2:73919253-73919272 | MS.gene074431:CDS | 45.0% | |
CAGAGACAACACACATGCTT+CGG | - | chr8.2:73918699-73918718 | MS.gene074431:intron | 45.0% | |
CCAAGATCAAGCAATGGCAA+TGG | - | chr8.2:73919259-73919278 | MS.gene074431:CDS | 45.0% | |
CCATTGCCATTGCTTGATCT+TGG | + | chr8.2:73919262-73919281 | None:intergenic | 45.0% | |
CGGATGTTATGCAAGCAAAG+GGG | - | chr8.2:73920311-73920330 | MS.gene074431:CDS | 45.0% | |
CTCTAACTTCGAAGCCCATA+CGG | + | chr8.2:73918457-73918476 | None:intergenic | 45.0% | |
GCGAGATTGGATGTCTTTCA+CGG | - | chr8.2:73918906-73918925 | MS.gene074431:CDS | 45.0% | |
GTTGTAAGGAAGGGCTAAAG+AGG | - | chr8.2:73918531-73918550 | MS.gene074431:CDS | 45.0% | |
TAAGGAAGGGCTAAAGAGGA+AGG | - | chr8.2:73918535-73918554 | MS.gene074431:CDS | 45.0% | |
TATGCAAGCAAAGGGGTTCA+GGG | - | chr8.2:73920318-73920337 | MS.gene074431:CDS | 45.0% | |
TGATCCTCATGAACTTGTGG+GGG | + | chr8.2:73920736-73920755 | None:intergenic | 45.0% | |
TTATGCAAGCAAAGGGGTTC+AGG | - | chr8.2:73920317-73920336 | MS.gene074431:CDS | 45.0% | |
! | CATCTTGGGAACTTGATGAC+GGG | - | chr8.2:73919353-73919372 | MS.gene074431:CDS | 45.0% |
! | GGCGTTGTGCAAGATTTTAG+GGG | - | chr8.2:73920070-73920089 | MS.gene074431:CDS | 45.0% |
AAGCAAGTGGCCTATTGGCA+TGG | + | chr8.2:73919093-73919112 | None:intergenic | 50.0% | |
AAGTGGCCTATTGGCATGGT+TGG | + | chr8.2:73919089-73919108 | None:intergenic | 50.0% | |
ACTTGTGGGGGCTCATAAGT+TGG | + | chr8.2:73920724-73920743 | None:intergenic | 50.0% | |
AGTATGGCGTATGGCGAGAT+TGG | - | chr8.2:73918893-73918912 | MS.gene074431:CDS | 50.0% | |
GCAGGGCATAGAGCTAATGT+TGG | - | chr8.2:73918821-73918840 | MS.gene074431:intron | 50.0% | |
GGAACTTCACGCACAAGCTA+TGG | - | chr8.2:73920246-73920265 | MS.gene074431:CDS | 50.0% | |
GTGATGCCCAAGACTCATCA+TGG | - | chr8.2:73919293-73919312 | MS.gene074431:CDS | 50.0% | |
TGGACAAGAGAAGCCCGTTA+TGG | - | chr8.2:73920049-73920068 | MS.gene074431:CDS | 50.0% | |
TTTAGGGGAAGGGAGGTTGA+AGG | - | chr8.2:73920085-73920104 | MS.gene074431:CDS | 50.0% | |
!! | GCAAGATTTTAGGGGAAGGG+AGG | - | chr8.2:73920078-73920097 | MS.gene074431:CDS | 50.0% |
GGGGGGCCAACCTATTTGAA+TGG | - | chr8.2:73920872-73920891 | MS.gene074431:CDS | 55.0% | |
TGAGCCCCCACAAGTTCATG+AGG | - | chr8.2:73920729-73920748 | MS.gene074431:CDS | 55.0% | |
! | GGCAACTGAAGCATCACCCA+AGG | - | chr8.2:73920168-73920187 | MS.gene074431:intron | 55.0% |
! | GGCATGGTTGGTACAGTACG+TGG | + | chr8.2:73919077-73919096 | None:intergenic | 55.0% |
! | TGTGGGGGCTCATAAGTTGG+AGG | + | chr8.2:73920721-73920740 | None:intergenic | 55.0% |
!! | CTTGGGAACTTGATGACGGG+AGG | - | chr8.2:73919356-73919375 | MS.gene074431:CDS | 55.0% |
AAGGGGTTCAGGGTACGACC+CGG | - | chr8.2:73920328-73920347 | MS.gene074431:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 73918362 | 73920907 | 73918362 | ID=MS.gene074431 |
chr8.2 | mRNA | 73918362 | 73920907 | 73918362 | ID=MS.gene074431.t1;Parent=MS.gene074431 |
chr8.2 | exon | 73920192 | 73920907 | 73920192 | ID=MS.gene074431.t1.exon1;Parent=MS.gene074431.t1 |
chr8.2 | CDS | 73920192 | 73920907 | 73920192 | ID=cds.MS.gene074431.t1;Parent=MS.gene074431.t1 |
chr8.2 | exon | 73918825 | 73920130 | 73918825 | ID=MS.gene074431.t1.exon2;Parent=MS.gene074431.t1 |
chr8.2 | CDS | 73918825 | 73920130 | 73918825 | ID=cds.MS.gene074431.t1;Parent=MS.gene074431.t1 |
chr8.2 | exon | 73918489 | 73918575 | 73918489 | ID=MS.gene074431.t1.exon3;Parent=MS.gene074431.t1 |
chr8.2 | CDS | 73918489 | 73918575 | 73918489 | ID=cds.MS.gene074431.t1;Parent=MS.gene074431.t1 |
chr8.2 | exon | 73918362 | 73918403 | 73918362 | ID=MS.gene074431.t1.exon4;Parent=MS.gene074431.t1 |
chr8.2 | CDS | 73918362 | 73918403 | 73918362 | ID=cds.MS.gene074431.t1;Parent=MS.gene074431.t1 |
Gene Sequence |
Protein sequence |