Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074449.t1 | XP_013444474.1 | 95.3 | 235 | 11 | 0 | 1 | 235 | 1 | 235 | 1.40E-118 | 435.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074449.t1 | Q9C9E3 | 34.1 | 220 | 115 | 5 | 15 | 212 | 3 | 214 | 1.6e-17 | 91.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074449.t1 | I3T425 | 95.3 | 235 | 11 | 0 | 1 | 235 | 1 | 235 | 1.0e-118 | 435.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene074449.t1 | TF | Tify |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074449.t1 | MTR_8g021380 | 95.319 | 235 | 11 | 0 | 1 | 235 | 1 | 235 | 8.38e-167 | 459 |
| MS.gene074449.t1 | MTR_8g021380 | 78.838 | 241 | 10 | 1 | 1 | 200 | 1 | 241 | 1.22e-130 | 369 |
| MS.gene074449.t1 | MTR_2g042900 | 32.900 | 231 | 118 | 7 | 11 | 210 | 12 | 236 | 1.34e-22 | 92.8 |
| MS.gene074449.t1 | MTR_2g042900 | 28.685 | 251 | 112 | 7 | 11 | 200 | 12 | 256 | 1.97e-14 | 70.9 |
| MS.gene074449.t1 | MTR_5g013530 | 33.071 | 127 | 70 | 4 | 85 | 208 | 24 | 138 | 6.03e-14 | 67.8 |
| MS.gene074449.t1 | MTR_5g013530 | 33.884 | 121 | 65 | 4 | 91 | 208 | 8 | 116 | 1.19e-13 | 66.6 |
| MS.gene074449.t1 | MTR_5g013520 | 32.258 | 124 | 63 | 3 | 91 | 208 | 1 | 109 | 1.64e-12 | 63.5 |
| MS.gene074449.t1 | MTR_4g124960 | 30.693 | 202 | 100 | 7 | 11 | 208 | 12 | 177 | 3.83e-12 | 63.5 |
| MS.gene074449.t1 | MTR_5g013515 | 31.034 | 116 | 77 | 1 | 93 | 208 | 2 | 114 | 4.18e-12 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074449.t1 | AT1G72450 | 35.000 | 220 | 113 | 7 | 15 | 212 | 3 | 214 | 3.48e-24 | 97.4 |
| MS.gene074449.t1 | AT1G19180 | 33.036 | 224 | 115 | 8 | 12 | 209 | 14 | 228 | 4.68e-19 | 83.6 |
| MS.gene074449.t1 | AT1G19180 | 33.036 | 224 | 115 | 8 | 12 | 209 | 14 | 228 | 4.68e-19 | 83.6 |
| MS.gene074449.t1 | AT1G17380 | 33.180 | 217 | 110 | 8 | 17 | 212 | 11 | 213 | 1.40e-18 | 82.4 |
| MS.gene074449.t1 | AT1G72450 | 33.173 | 208 | 109 | 6 | 15 | 200 | 3 | 202 | 3.76e-18 | 80.1 |
| MS.gene074449.t1 | AT1G74950 | 29.600 | 250 | 142 | 9 | 1 | 223 | 1 | 243 | 1.20e-16 | 77.0 |
| MS.gene074449.t1 | AT1G19180 | 36.207 | 116 | 70 | 3 | 96 | 209 | 49 | 162 | 3.14e-13 | 66.2 |
| MS.gene074449.t1 | AT1G17380 | 34.194 | 155 | 77 | 5 | 99 | 230 | 63 | 215 | 8.45e-13 | 66.2 |
| MS.gene074449.t1 | AT1G17380 | 31.220 | 205 | 109 | 7 | 16 | 202 | 10 | 200 | 8.59e-13 | 65.9 |
| MS.gene074449.t1 | AT1G74950 | 28.634 | 227 | 129 | 8 | 1 | 200 | 1 | 221 | 2.87e-11 | 61.6 |
Find 47 sgRNAs with CRISPR-Local
Find 136 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTGCTTTCTTTGGGAAAA+TGG | 0.109042 | 8.2:-73655266 | MS.gene074449:CDS |
| TTGAAGGAAAAGAGAATTTC+TGG | 0.175716 | 8.2:-73655298 | MS.gene074449:CDS |
| GATTCTACACCTGCTTTCTT+TGG | 0.212849 | 8.2:-73655274 | MS.gene074449:CDS |
| TTAAGAAGTGAAGCTCTTCT+TGG | 0.236604 | 8.2:+73653390 | None:intergenic |
| GTGTTTGTTTGAGGAATTTC+GGG | 0.278263 | 8.2:+73653593 | None:intergenic |
| AACTAATTTACCTGAACATT+TGG | 0.278582 | 8.2:+73653538 | None:intergenic |
| GAACTTCTCCGGTGCCTTAC+CGG | 0.289709 | 8.2:+73655357 | None:intergenic |
| TCCTTGTTCGATTGTTTCTA+AGG | 0.291189 | 8.2:+73653568 | None:intergenic |
| AGTGTTTGTTTGAGGAATTT+CGG | 0.311669 | 8.2:+73653592 | None:intergenic |
| TGATCGGAAGAATTATCTTT+AGG | 0.316360 | 8.2:+73653168 | None:intergenic |
| AGAGGACCCTATCAAATTAA+TGG | 0.329656 | 8.2:-73653225 | MS.gene074449:CDS |
| TTTGTGACCATTAATTTGAT+AGG | 0.341555 | 8.2:+73653218 | None:intergenic |
| CAATTGACGATATTCTATTC+CGG | 0.343572 | 8.2:-73653755 | MS.gene074449:CDS |
| ATTCTACACCTGCTTTCTTT+GGG | 0.379166 | 8.2:-73655273 | MS.gene074449:CDS |
| GGAAACCAAGCCAAATGTTC+AGG | 0.389691 | 8.2:-73653548 | MS.gene074449:intron |
| CACTAGTGACCGGTGCACTT+GGG | 0.400373 | 8.2:+73653630 | None:intergenic |
| AATTGACGATATTCTATTCC+GGG | 0.411302 | 8.2:-73653754 | MS.gene074449:CDS |
| TCACTAGTGACCGGTGCACT+TGG | 0.422956 | 8.2:+73653629 | None:intergenic |
| AACTAAATCACTATAAGTTA+AGG | 0.443726 | 8.2:+73653139 | None:intergenic |
| TGTGAAAATTTGAACTTCTC+CGG | 0.451678 | 8.2:+73655346 | None:intergenic |
| GTGCCTTACCGGTGAGTCTC+CGG | 0.457733 | 8.2:+73655368 | None:intergenic |
| TCTAAGGCAGTGTTTGTTTG+AGG | 0.469946 | 8.2:+73653584 | None:intergenic |
| TTTGGGAAAATGGAACCTAA+AGG | 0.472484 | 8.2:-73655256 | MS.gene074449:intron |
| TTGTGACCATTAATTTGATA+GGG | 0.477946 | 8.2:+73653219 | None:intergenic |
| ACTAGTGACCGGTGCACTTG+GGG | 0.487227 | 8.2:+73653631 | None:intergenic |
| TACGAATGCAACTGAGATCA+TGG | 0.488655 | 8.2:-73653702 | MS.gene074449:CDS |
| ATTTACCTGAACATTTGGCT+TGG | 0.519424 | 8.2:+73653543 | None:intergenic |
| GTATTAGACTTCTTAATGCA+AGG | 0.531343 | 8.2:+73654868 | None:intergenic |
| CTAATACTGTGTCAGATGGC+CGG | 0.536232 | 8.2:-73655387 | MS.gene074449:CDS |
| GCCAACATGCAAAATTCAGA+TGG | 0.539238 | 8.2:-73654946 | MS.gene074449:CDS |
| CCAACATGCAAAATTCAGAT+GGG | 0.542946 | 8.2:-73654945 | MS.gene074449:CDS |
| CTAGTGACCGGTGCACTTGG+GGG | 0.549856 | 8.2:+73653632 | None:intergenic |
| TCAGATGGCCGGAGACTCAC+CGG | 0.554978 | 8.2:-73655376 | MS.gene074449:CDS |
| TGCAACTGAGATCATGGAGT+TGG | 0.557096 | 8.2:-73653696 | MS.gene074449:CDS |
| TAAGTTAAGGTCGAATTGAT+CGG | 0.557387 | 8.2:+73653152 | None:intergenic |
| GAGACTCACCGGTAAGGCAC+CGG | 0.568974 | 8.2:-73655365 | MS.gene074449:CDS |
| TAGTGACCGGTGCACTTGGG+GGG | 0.574627 | 8.2:+73653633 | None:intergenic |
| TTCTTGAGAAAAGAAAAGAA+AGG | 0.577298 | 8.2:-73653365 | MS.gene074449:intron |
| GAATAGAATATCGTCAATTG+TGG | 0.583205 | 8.2:+73653758 | None:intergenic |
| TGGCCGGAGACTCACCGGTA+AGG | 0.587038 | 8.2:-73655371 | MS.gene074449:CDS |
| TTAGCTAATACTGTGTCAGA+TGG | 0.590836 | 8.2:-73655391 | MS.gene074449:CDS |
| ATGATCTCAGTTGCATTCGT+AGG | 0.602248 | 8.2:+73653704 | None:intergenic |
| TGTTGCAGGGTCATTGCTAG+AGG | 0.603165 | 8.2:-73653243 | MS.gene074449:intron |
| CAACATGCAAAATTCAGATG+GGG | 0.624122 | 8.2:-73654944 | MS.gene074449:CDS |
| AACATGCAAAATTCAGATGG+GGG | 0.635592 | 8.2:-73654943 | MS.gene074449:CDS |
| GCATTAAGAAGTCTAATACA+AGG | 0.639363 | 8.2:-73654864 | MS.gene074449:intron |
| GCCTTAGAAACAATCGAACA+AGG | 0.645101 | 8.2:-73653569 | MS.gene074449:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAATTTAAAATTAAATA+AGG | + | chr8.2:73653418-73653437 | None:intergenic | 0.0% |
| !!! | ATTTTTTTTTTGTTACAAAA+TGG | - | chr8.2:73653431-73653450 | MS.gene074449:intron | 10.0% |
| !! | AAATATATATTGTAAGAGTT+TGG | - | chr8.2:73654710-73654729 | MS.gene074449:intron | 15.0% |
| !! | AAGATTATATATATACCTTT+AGG | + | chr8.2:73653311-73653330 | None:intergenic | 15.0% |
| !! | TCAATATTGTAAGAAATATT+CGG | - | chr8.2:73654649-73654668 | MS.gene074449:intron | 15.0% |
| !!! | AAGAAATAGAAATTTTTAAC+TGG | + | chr8.2:73655216-73655235 | None:intergenic | 15.0% |
| !!! | ATATTGGTTAGAATAATAAT+TGG | - | chr8.2:73654344-73654363 | MS.gene074449:intron | 15.0% |
| !!! | TGTAAATTAATTTTATTGTG+AGG | + | chr8.2:73654594-73654613 | None:intergenic | 15.0% |
| !!! | TTCTTGTTTTATTTCTTATT+TGG | - | chr8.2:73653332-73653351 | MS.gene074449:intron | 15.0% |
| !!! | TTTAGAGTATCATTTTATTT+TGG | + | chr8.2:73654618-73654637 | None:intergenic | 15.0% |
| !!! | TTTAGTATTGGAAAATTATT+GGG | - | chr8.2:73653463-73653482 | MS.gene074449:intron | 15.0% |
| !! | GTATTTCTTAGTAATTTCAT+AGG | + | chr8.2:73653818-73653837 | None:intergenic | 20.0% |
| !!! | AATGTTTTTCCATGTAAATT+AGG | - | chr8.2:73653854-73653873 | MS.gene074449:intron | 20.0% |
| !!! | CAAAAATTGCTTTTATTTTC+TGG | - | chr8.2:73653792-73653811 | MS.gene074449:intron | 20.0% |
| !!! | GTTTAGTATTGGAAAATTAT+TGG | - | chr8.2:73653462-73653481 | MS.gene074449:intron | 20.0% |
| !!! | TAAATAAGTGTAGATTTGTT+TGG | - | chr8.2:73654273-73654292 | MS.gene074449:intron | 20.0% |
| !!! | TTTTTTTGTTACAAAATGGA+TGG | - | chr8.2:73653435-73653454 | MS.gene074449:intron | 20.0% |
| ! | AACCAAACAATTAATTGACA+AGG | + | chr8.2:73653383-73653402 | None:intergenic | 25.0% |
| ! | AACTAATTTACCTGAACATT+TGG | + | chr8.2:73655014-73655033 | None:intergenic | 25.0% |
| ! | AATTAATGGTCACAAAAATG+AGG | - | chr8.2:73655338-73655357 | MS.gene074449:CDS | 25.0% |
| ! | ATCTTGATTAAAACAATCGT+CGG | - | chr8.2:73654043-73654062 | MS.gene074449:intron | 25.0% |
| ! | ATTAATGGTCACAAAAATGA+GGG | - | chr8.2:73655339-73655358 | MS.gene074449:CDS | 25.0% |
| ! | CAAAAATAGACAACATACAA+AGG | + | chr8.2:73655255-73655274 | None:intergenic | 25.0% |
| ! | CAAGATTCAATTAATTAGCA+TGG | + | chr8.2:73655283-73655302 | None:intergenic | 25.0% |
| ! | CTAGATCTATTTATACAAAG+TGG | - | chr8.2:73653962-73653981 | MS.gene074449:intron | 25.0% |
| ! | TATTGTAAGAAATATTCGGT+AGG | - | chr8.2:73654653-73654672 | MS.gene074449:intron | 25.0% |
| ! | TTCTTGAGAAAAGAAAAGAA+AGG | - | chr8.2:73655184-73655203 | MS.gene074449:intron | 25.0% |
| !! | AACAGATCTATACTTCTTTT+TGG | + | chr8.2:73654111-73654130 | None:intergenic | 25.0% |
| !! | AGATTTGTTTGATTGAAAAG+AGG | - | chr8.2:73654441-73654460 | MS.gene074449:intron | 25.0% |
| !! | AGGTTGAAGTATTAATGATA+TGG | + | chr8.2:73654494-73654513 | None:intergenic | 25.0% |
| !! | ATGTAAATTAGGTTAGTCAT+GGG | - | chr8.2:73653865-73653884 | MS.gene074449:intron | 25.0% |
| !! | TACATGTTAGTGATCAATTT+TGG | + | chr8.2:73654523-73654542 | None:intergenic | 25.0% |
| !! | TTGTGACCATTAATTTGATA+GGG | + | chr8.2:73655333-73655352 | None:intergenic | 25.0% |
| !! | TTTGTGACCATTAATTTGAT+AGG | + | chr8.2:73655334-73655353 | None:intergenic | 25.0% |
| !!! | AATCTTTCATTTTGATCTTG+TGG | + | chr8.2:73654426-73654445 | None:intergenic | 25.0% |
| !!! | ATTTTGCTGATTGTGTTTTT+TGG | - | chr8.2:73653545-73653564 | MS.gene074449:intron | 25.0% |
| !!! | GATACAATTCAGTTTTGAAA+AGG | - | chr8.2:73653900-73653919 | MS.gene074449:intron | 25.0% |
| !!! | TGGAAAAACATTTTGATAGT+AGG | + | chr8.2:73653846-73653865 | None:intergenic | 25.0% |
| !!! | TGTATGTTGTCTATTTTTGT+TGG | - | chr8.2:73655256-73655275 | MS.gene074449:intron | 25.0% |
| !!! | TTTAATTTTTCACTAGTGAC+CGG | + | chr8.2:73654932-73654951 | None:intergenic | 25.0% |
| AATTGACGATATTCTATTCC+GGG | - | chr8.2:73654795-73654814 | MS.gene074449:intron | 30.0% | |
| AGTGTTTGTTTGAGGAATTT+CGG | + | chr8.2:73654960-73654979 | None:intergenic | 30.0% | |
| ATTGAATCTTGAATTGTTGC+AGG | - | chr8.2:73655292-73655311 | MS.gene074449:CDS | 30.0% | |
| CAATTGACGATATTCTATTC+CGG | - | chr8.2:73654794-73654813 | MS.gene074449:intron | 30.0% | |
| CATGACTAACCTAATTTACA+TGG | + | chr8.2:73653866-73653885 | None:intergenic | 30.0% | |
| CTAACATGTATGTACGAAAA+AGG | - | chr8.2:73654533-73654552 | MS.gene074449:intron | 30.0% | |
| GAATAGAATATCGTCAATTG+TGG | + | chr8.2:73654794-73654813 | None:intergenic | 30.0% | |
| GCATTAAGAAGTCTAATACA+AGG | - | chr8.2:73653685-73653704 | MS.gene074449:CDS | 30.0% | |
| GGTCACTAGTGAAAAATTAA+AGG | - | chr8.2:73654931-73654950 | MS.gene074449:CDS | 30.0% | |
| GTATTAGACTTCTTAATGCA+AGG | + | chr8.2:73653684-73653703 | None:intergenic | 30.0% | |
| TAAGTTAAGGTCGAATTGAT+CGG | + | chr8.2:73655400-73655419 | None:intergenic | 30.0% | |
| TAGCAAAAGTCGAATTGTTT+GGG | - | chr8.2:73654145-73654164 | MS.gene074449:intron | 30.0% | |
| TGATCGGAAGAATTATCTTT+AGG | + | chr8.2:73655384-73655403 | None:intergenic | 30.0% | |
| TGCCTTGTCAATTAATTGTT+TGG | - | chr8.2:73653378-73653397 | MS.gene074449:CDS | 30.0% | |
| TGTGAAAATTTGAACTTCTC+CGG | + | chr8.2:73653206-73653225 | None:intergenic | 30.0% | |
| TTAGCAAAAGTCGAATTGTT+TGG | - | chr8.2:73654144-73654163 | MS.gene074449:intron | 30.0% | |
| TTGAAGGAAAAGAGAATTTC+TGG | - | chr8.2:73653251-73653270 | MS.gene074449:intron | 30.0% | |
| TTGAATCTTGAATTGTTGCA+GGG | - | chr8.2:73655293-73655312 | MS.gene074449:CDS | 30.0% | |
| TTGCATGCTTTGTAATGTTT+CGG | + | chr8.2:73655083-73655102 | None:intergenic | 30.0% | |
| TTGTTACAAAATGGATGGTT+TGG | - | chr8.2:73653440-73653459 | MS.gene074449:intron | 30.0% | |
| ! | AGGTATTGTTGTGTTAAGTT+TGG | - | chr8.2:73654553-73654572 | MS.gene074449:intron | 30.0% |
| ! | CATGTAAATTAGGTTAGTCA+TGG | - | chr8.2:73653864-73653883 | MS.gene074449:intron | 30.0% |
| ! | GTCAAATACTAACATTTTCC+CGG | + | chr8.2:73654816-73654835 | None:intergenic | 30.0% |
| !! | GTTTTGATCTTCTAGTCTAA+GGG | + | chr8.2:73654251-73654270 | None:intergenic | 30.0% |
| !! | TGTTAGTGATCAATTTTGGT+TGG | + | chr8.2:73654519-73654538 | None:intergenic | 30.0% |
| !!! | GGATTTTTTAGCAAGTACAA+AGG | - | chr8.2:73653572-73653591 | MS.gene074449:CDS | 30.0% |
| !!! | GTTAGTGATCAATTTTGGTT+GGG | + | chr8.2:73654518-73654537 | None:intergenic | 30.0% |
| AAAAATGAGGGTAGTAGTTC+TGG | - | chr8.2:73655351-73655370 | MS.gene074449:CDS | 35.0% | |
| AACATGCAAAATTCAGATGG+GGG | - | chr8.2:73653606-73653625 | MS.gene074449:CDS | 35.0% | |
| AGAGGACCCTATCAAATTAA+TGG | - | chr8.2:73655324-73655343 | MS.gene074449:CDS | 35.0% | |
| ATTCTACACCTGCTTTCTTT+GGG | - | chr8.2:73653276-73653295 | MS.gene074449:intron | 35.0% | |
| ATTTACCTGAACATTTGGCT+TGG | + | chr8.2:73655009-73655028 | None:intergenic | 35.0% | |
| CAACATGCAAAATTCAGATG+GGG | - | chr8.2:73653605-73653624 | MS.gene074449:CDS | 35.0% | |
| CACAATCAGCAAAATTTCAC+AGG | + | chr8.2:73653540-73653559 | None:intergenic | 35.0% | |
| CCAACATGCAAAATTCAGAT+GGG | - | chr8.2:73653604-73653623 | MS.gene074449:CDS | 35.0% | |
| CTTCTAGTCTAAGGGAAATT+GGG | + | chr8.2:73654243-73654262 | None:intergenic | 35.0% | |
| GAGAAAAGAAAAGAAAGGTG+TGG | - | chr8.2:73655189-73655208 | MS.gene074449:intron | 35.0% | |
| GTAGTACTCGAGTTCAATAT+TGG | - | chr8.2:73654328-73654347 | MS.gene074449:intron | 35.0% | |
| GTGTTTGTTTGAGGAATTTC+GGG | + | chr8.2:73654959-73654978 | None:intergenic | 35.0% | |
| TAAAATCGTGAATCAGTGAG+AGG | - | chr8.2:73654078-73654097 | MS.gene074449:intron | 35.0% | |
| TCTAGACATCTAATGACAAG+TGG | + | chr8.2:73653947-73653966 | None:intergenic | 35.0% | |
| TCTTCTAGTCTAAGGGAAAT+TGG | + | chr8.2:73654244-73654263 | None:intergenic | 35.0% | |
| TTAAGAAGTGAAGCTCTTCT+TGG | + | chr8.2:73655162-73655181 | None:intergenic | 35.0% | |
| TTAGCTAAGGCCTAATTGTT+CGG | - | chr8.2:73654305-73654324 | MS.gene074449:intron | 35.0% | |
| TTAGCTAATACTGTGTCAGA+TGG | - | chr8.2:73653158-73653177 | MS.gene074449:CDS | 35.0% | |
| TTTATACAAAGTGGCGCAAT+TGG | - | chr8.2:73653971-73653990 | MS.gene074449:intron | 35.0% | |
| TTTATTGTGAGGTTGAGATC+TGG | + | chr8.2:73654583-73654602 | None:intergenic | 35.0% | |
| TTTGGGAAAATGGAACCTAA+AGG | - | chr8.2:73653293-73653312 | MS.gene074449:intron | 35.0% | |
| ! | ATCGTCAATTGTGGAGTTTT+AGG | + | chr8.2:73654785-73654804 | None:intergenic | 35.0% |
| ! | ATTTTCAGAGGCTAATTTGG+TGG | + | chr8.2:73654879-73654898 | None:intergenic | 35.0% |
| ! | TAGCTTAGGTCGAAATGTTT+TGG | - | chr8.2:73654005-73654024 | MS.gene074449:intron | 35.0% |
| ! | TGGATTTTCAGAGGCTAATT+TGG | + | chr8.2:73654882-73654901 | None:intergenic | 35.0% |
| !! | CGTTTTGATCTTCTAGTCTA+AGG | + | chr8.2:73654252-73654271 | None:intergenic | 35.0% |
| !! | TCCTTGTTCGATTGTTTCTA+AGG | + | chr8.2:73654984-73655003 | None:intergenic | 35.0% |
| !! | TCTTTTGAGTCAGTTCTTGA+AGG | - | chr8.2:73653235-73653254 | MS.gene074449:CDS | 35.0% |
| !! | TGGATGGTTTGGTTTAGTAT+TGG | - | chr8.2:73653451-73653470 | MS.gene074449:intron | 35.0% |
| !!! | CTGATTGTGTTTTTTGGTTG+TGG | - | chr8.2:73653551-73653570 | MS.gene074449:CDS | 35.0% |
| AGACATCTAATGACAAGTGG+TGG | + | chr8.2:73653944-73653963 | None:intergenic | 40.0% | |
| AGTCTAAGGGAAATTGGGTT+CGG | + | chr8.2:73654238-73654257 | None:intergenic | 40.0% | |
| ATGATCTCAGTTGCATTCGT+AGG | + | chr8.2:73654848-73654867 | None:intergenic | 40.0% | |
| GAACAATTAGGCCTTAGCTA+AGG | + | chr8.2:73654306-73654325 | None:intergenic | 40.0% | |
| GATTCTACACCTGCTTTCTT+TGG | - | chr8.2:73653275-73653294 | MS.gene074449:intron | 40.0% | |
| GCCAACATGCAAAATTCAGA+TGG | - | chr8.2:73653603-73653622 | MS.gene074449:CDS | 40.0% | |
| GCCTTAGAAACAATCGAACA+AGG | - | chr8.2:73654980-73654999 | MS.gene074449:intron | 40.0% | |
| GTAGTACTTGAGTTCGATCT+TGG | - | chr8.2:73654167-73654186 | MS.gene074449:intron | 40.0% | |
| TACGAATGCAACTGAGATCA+TGG | - | chr8.2:73654847-73654866 | MS.gene074449:intron | 40.0% | |
| TACTTGAGTTCGATCTTGGT+TGG | - | chr8.2:73654171-73654190 | MS.gene074449:intron | 40.0% | |
| TAGCTAAGGCCTAATTGTTC+GGG | - | chr8.2:73654306-73654325 | MS.gene074449:intron | 40.0% | |
| ! | AAATTAGGTTAGTCATGGGC+TGG | - | chr8.2:73653869-73653888 | MS.gene074449:intron | 40.0% |
| ! | ACCTGCTTTCTTTGGGAAAA+TGG | - | chr8.2:73653283-73653302 | MS.gene074449:intron | 40.0% |
| ! | CCCATCTGAATTTTGCATGT+TGG | + | chr8.2:73653607-73653626 | None:intergenic | 40.0% |
| ! | TCCATTTTCCCAAAGAAAGC+AGG | + | chr8.2:73653287-73653306 | None:intergenic | 40.0% |
| ! | TCTAAGGCAGTGTTTGTTTG+AGG | + | chr8.2:73654968-73654987 | None:intergenic | 40.0% |
| !!! | GTGATCAATTTTGGTTGGGA+AGG | + | chr8.2:73654514-73654533 | None:intergenic | 40.0% |
| CGAGTACTACCCGAACAATT+AGG | + | chr8.2:73654318-73654337 | None:intergenic | 45.0% | |
| CTAATACTGTGTCAGATGGC+CGG | - | chr8.2:73653162-73653181 | MS.gene074449:CDS | 45.0% | |
| GGAAACCAAGCCAAATGTTC+AGG | - | chr8.2:73655001-73655020 | MS.gene074449:intron | 45.0% | |
| GTCGAGACTGAATTTCACTG+TGG | - | chr8.2:73654399-73654418 | MS.gene074449:intron | 45.0% | |
| TGCAACTGAGATCATGGAGT+TGG | - | chr8.2:73654853-73654872 | MS.gene074449:intron | 45.0% | |
| ! | CAAGGATTTTCGACAAGCTG+AGG | + | chr8.2:73653666-73653685 | None:intergenic | 45.0% |
| ! | TGGTTAATGCGCGTTAGCTT+AGG | - | chr8.2:73653991-73654010 | MS.gene074449:intron | 45.0% |
| ! | TTCAGCGCTTGGATTTTCAG+AGG | + | chr8.2:73654891-73654910 | None:intergenic | 45.0% |
| TGTTGCAGGGTCATTGCTAG+AGG | - | chr8.2:73655306-73655325 | MS.gene074449:CDS | 50.0% | |
| !! | TTGGTTCTGCGCCTTAGCTA+AGG | - | chr8.2:73654292-73654311 | MS.gene074449:intron | 50.0% |
| ACTAGTGACCGGTGCACTTG+GGG | + | chr8.2:73654921-73654940 | None:intergenic | 55.0% | |
| AGAAAACCCCCCAAGTGCAC+CGG | - | chr8.2:73654910-73654929 | MS.gene074449:CDS | 55.0% | |
| CACTAGTGACCGGTGCACTT+GGG | + | chr8.2:73654922-73654941 | None:intergenic | 55.0% | |
| GAACTTCTCCGGTGCCTTAC+CGG | + | chr8.2:73653195-73653214 | None:intergenic | 55.0% | |
| TCACTAGTGACCGGTGCACT+TGG | + | chr8.2:73654923-73654942 | None:intergenic | 55.0% | |
| CTAGTGACCGGTGCACTTGG+GGG | + | chr8.2:73654920-73654939 | None:intergenic | 60.0% | |
| GAGACTCACCGGTAAGGCAC+CGG | - | chr8.2:73653184-73653203 | MS.gene074449:CDS | 60.0% | |
| GTGCCTTACCGGTGAGTCTC+CGG | + | chr8.2:73653184-73653203 | None:intergenic | 60.0% | |
| TAGTGACCGGTGCACTTGGG+GGG | + | chr8.2:73654919-73654938 | None:intergenic | 60.0% | |
| TCAGATGGCCGGAGACTCAC+CGG | - | chr8.2:73653173-73653192 | MS.gene074449:CDS | 60.0% | |
| ! | GGGGGGTTTTCTTCAGCGCT+TGG | + | chr8.2:73654902-73654921 | None:intergenic | 60.0% |
| TGGCCGGAGACTCACCGGTA+AGG | - | chr8.2:73653178-73653197 | MS.gene074449:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 73653149 | 73655422 | 73653149 | ID=MS.gene074449 |
| chr8.2 | mRNA | 73653149 | 73655422 | 73653149 | ID=MS.gene074449.t1;Parent=MS.gene074449 |
| chr8.2 | exon | 73655257 | 73655422 | 73655257 | ID=MS.gene074449.t1.exon1;Parent=MS.gene074449.t1 |
| chr8.2 | CDS | 73655257 | 73655422 | 73655257 | ID=cds.MS.gene074449.t1;Parent=MS.gene074449.t1 |
| chr8.2 | exon | 73654865 | 73654988 | 73654865 | ID=MS.gene074449.t1.exon2;Parent=MS.gene074449.t1 |
| chr8.2 | CDS | 73654865 | 73654988 | 73654865 | ID=cds.MS.gene074449.t1;Parent=MS.gene074449.t1 |
| chr8.2 | exon | 73653549 | 73653799 | 73653549 | ID=MS.gene074449.t1.exon3;Parent=MS.gene074449.t1 |
| chr8.2 | CDS | 73653549 | 73653799 | 73653549 | ID=cds.MS.gene074449.t1;Parent=MS.gene074449.t1 |
| chr8.2 | exon | 73653366 | 73653423 | 73653366 | ID=MS.gene074449.t1.exon4;Parent=MS.gene074449.t1 |
| chr8.2 | CDS | 73653366 | 73653423 | 73653366 | ID=cds.MS.gene074449.t1;Parent=MS.gene074449.t1 |
| chr8.2 | exon | 73653149 | 73653257 | 73653149 | ID=MS.gene074449.t1.exon5;Parent=MS.gene074449.t1 |
| chr8.2 | CDS | 73653149 | 73653257 | 73653149 | ID=cds.MS.gene074449.t1;Parent=MS.gene074449.t1 |
| Gene Sequence |
| Protein sequence |
