Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07451.t1 | XP_013468812.1 | 94.6 | 497 | 27 | 0 | 1 | 497 | 1 | 497 | 2.40E-261 | 911 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07451.t1 | P38222 | 27.5 | 360 | 202 | 12 | 28 | 333 | 32 | 386 | 7.9e-19 | 96.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07451.t1 | A0A072VLJ5 | 94.6 | 497 | 27 | 0 | 1 | 497 | 1 | 497 | 1.8e-261 | 911.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene07451.t1 | TR | SET |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07451.t1 | MTR_1g077040 | 95.171 | 497 | 24 | 0 | 1 | 497 | 1 | 497 | 0.0 | 909 |
| MS.gene07451.t1 | MTR_1g077040 | 94.624 | 372 | 20 | 0 | 126 | 497 | 43 | 414 | 0.0 | 648 |
| MS.gene07451.t1 | MTR_4g082305 | 29.798 | 198 | 125 | 6 | 6 | 197 | 55 | 244 | 6.94e-13 | 70.5 |
| MS.gene07451.t1 | MTR_4g082305 | 29.798 | 198 | 125 | 6 | 6 | 197 | 55 | 244 | 7.80e-13 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07451.t1 | AT3G56570 | 54.851 | 536 | 195 | 9 | 1 | 495 | 1 | 530 | 0.0 | 540 |
| MS.gene07451.t1 | AT3G56570 | 54.749 | 537 | 195 | 10 | 1 | 495 | 1 | 531 | 0.0 | 535 |
| MS.gene07451.t1 | AT1G14030 | 27.638 | 199 | 128 | 6 | 6 | 197 | 49 | 238 | 2.78e-11 | 66.2 |
Find 0 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTCAATAAAAAAAAAGC+AGG | + | 8694:4050-4069 | MS.gene07451:intergenic | 15.0% |
| !! | AACATTTAAAAACTACAAAA+TGG | + | 8694:6408-6427 | MS.gene07451:intergenic | 15.0% |
| !! | AGATGATGTATAATAAAATA+AGG | + | 8694:6771-6790 | MS.gene07451:intergenic | 15.0% |
| !! | ATTATTAAACAATACATGTA+TGG | + | 8694:5101-5120 | MS.gene07451:intergenic | 15.0% |
| !!! | TTTATTTTTATGCATTATTG+AGG | - | 8694:3612-3631 | MS.gene07451:CDS | 15.0% |
| !! | AAGTAATAACTAGCAAATTA+AGG | + | 8694:4831-4850 | MS.gene07451:intergenic | 20.0% |
| !! | AATTTATTGTAAACATCATC+CGG | + | 8694:6799-6818 | MS.gene07451:intergenic | 20.0% |
| !! | AGTAATAACTAGCAAATTAA+GGG | + | 8694:4830-4849 | MS.gene07451:intergenic | 20.0% |
| !! | ATACAGGTATTTAATACTTA+CGG | - | 8694:6514-6533 | MS.gene07451:intron | 20.0% |
| !! | ATATGTTATTAGATTGTCAA+TGG | - | 8694:5299-5318 | MS.gene07451:intron | 20.0% |
| !! | CATTATGAGAGATTTAAATT+TGG | - | 8694:3641-3660 | MS.gene07451:CDS | 20.0% |
| !! | GTGTATATTATCATTTATCA+TGG | + | 8694:5042-5061 | MS.gene07451:intergenic | 20.0% |
| !! | TATTAAATACCTGTATCAAA+TGG | + | 8694:6510-6529 | MS.gene07451:intergenic | 20.0% |
| !! | TCCAGATACATAAAAAAAAT+TGG | + | 8694:5561-5580 | MS.gene07451:intergenic | 20.0% |
| !! | TTATACATTTGATAAGAAGA+GGG | + | 8694:5166-5185 | MS.gene07451:intergenic | 20.0% |
| !!! | AAACTTTTGATAAGGAAAAA+TGG | + | 8694:3181-3200 | MS.gene07451:intergenic | 20.0% |
| !!! | AACTTTTGATAAGGAAAAAT+GGG | + | 8694:3180-3199 | MS.gene07451:intergenic | 20.0% |
| !!! | ACCAATTTTTTTTATGTATC+TGG | - | 8694:5557-5576 | MS.gene07451:CDS | 20.0% |
| !!! | AGTGTTTTTAACAATAACAA+TGG | + | 8694:4870-4889 | MS.gene07451:intergenic | 20.0% |
| !!! | ATTATACATCATCTTTTTAC+CGG | - | 8694:6777-6796 | MS.gene07451:CDS | 20.0% |
| !!! | ATTTAAAGTGTTTGTATTCT+TGG | - | 8694:5395-5414 | MS.gene07451:intron | 20.0% |
| !!! | TTGAAGTCTTTTTAAGTTTA+AGG | - | 8694:5531-5550 | MS.gene07451:intron | 20.0% |
| !!! | TTTAAAGTGTTTGTATTCTT+GGG | - | 8694:5396-5415 | MS.gene07451:intron | 20.0% |
| !!! | TTTAGCATAAACTTTTGATA+AGG | + | 8694:3189-3208 | MS.gene07451:intergenic | 20.0% |
| !!! | TTTTTTTTTTTAACTTCCAC+TGG | - | 8694:6308-6327 | MS.gene07451:intron | 20.0% |
| ! | AAATAAATGTATGCTATCTG+AGG | + | 8694:6373-6392 | MS.gene07451:intergenic | 25.0% |
| ! | AATGATAATATACACTGTCT+TGG | - | 8694:5047-5066 | MS.gene07451:intron | 25.0% |
| ! | ACTGTTAGAATAAATCAGTA+GGG | + | 8694:5969-5988 | MS.gene07451:intergenic | 25.0% |
| ! | AGTAGTACTAAAAACAATTC+GGG | - | 8694:5662-5681 | MS.gene07451:CDS | 25.0% |
| ! | AGTTATATTAGTCAGTTAGA+GGG | + | 8694:5915-5934 | MS.gene07451:intergenic | 25.0% |
| ! | ATAAAGGGAAATCAAAATAG+AGG | + | 8694:5885-5904 | MS.gene07451:intergenic | 25.0% |
| ! | ATCAATAGAAGATGATATTG+AGG | - | 8694:6999-7018 | MS.gene07451:CDS | 25.0% |
| ! | ATCATTGAAAATGCTTGTTT+GGG | - | 8694:3421-3440 | MS.gene07451:CDS | 25.0% |
| ! | ATTCTTCTGTTCTTAATTGT+TGG | + | 8694:5716-5735 | MS.gene07451:intergenic | 25.0% |
| ! | ATTTAATACTTACGGGATAT+TGG | - | 8694:6522-6541 | MS.gene07451:intron | 25.0% |
| ! | CACAATTATATCCATTGAAA+GGG | - | 8694:4257-4276 | MS.gene07451:CDS | 25.0% |
| ! | GAGATTTAAATTTGGACTAA+TGG | - | 8694:3649-3668 | MS.gene07451:CDS | 25.0% |
| ! | GAGTAGTACTAAAAACAATT+CGG | - | 8694:5661-5680 | MS.gene07451:CDS | 25.0% |
| ! | GATATATACTTGTGTGAAAA+TGG | - | 8694:4015-4034 | MS.gene07451:intron | 25.0% |
| ! | GATATCATCATTCAAAAAAG+TGG | + | 8694:6872-6891 | MS.gene07451:intergenic | 25.0% |
| ! | GTAATAACTAGCAAATTAAG+GGG | + | 8694:4829-4848 | MS.gene07451:intergenic | 25.0% |
| ! | GTTATACATTTGATAAGAAG+AGG | + | 8694:5167-5186 | MS.gene07451:intergenic | 25.0% |
| ! | TACAGGTATTTAATACTTAC+GGG | - | 8694:6515-6534 | MS.gene07451:intron | 25.0% |
| ! | TAGGATTAAAAAAACTGCAA+TGG | - | 8694:5605-5624 | MS.gene07451:CDS | 25.0% |
| ! | TAGTTATATTAGTCAGTTAG+AGG | + | 8694:5916-5935 | MS.gene07451:intergenic | 25.0% |
| ! | TATTTCGAGATATCATTTGA+TGG | - | 8694:6727-6746 | MS.gene07451:CDS | 25.0% |
| ! | TCACAATTATATCCATTGAA+AGG | - | 8694:4256-4275 | MS.gene07451:CDS | 25.0% |
| ! | TTAGAGGGGATATAAATAAA+GGG | + | 8694:5900-5919 | MS.gene07451:intergenic | 25.0% |
| ! | TTGAAAGGGAGTTTAAAAAT+TGG | - | 8694:4380-4399 | MS.gene07451:intron | 25.0% |
| ! | TTTAATACTTACGGGATATT+GGG | - | 8694:6523-6542 | MS.gene07451:intron | 25.0% |
| !! | AAGAAAACTTTTAGTCTGTT+TGG | + | 8694:3991-4010 | MS.gene07451:intergenic | 25.0% |
| !! | ATTTTTAAACTCCCTTTCAA+TGG | + | 8694:4380-4399 | MS.gene07451:intergenic | 25.0% |
| !! | CATAATTTCTGAGTTTTTGA+AGG | + | 8694:7101-7120 | MS.gene07451:intergenic | 25.0% |
| !! | CATTATAGTTTTCTTTGACA+TGG | - | 8694:6469-6488 | MS.gene07451:intron | 25.0% |
| !! | GATCAGAAAATTTTCACAAA+AGG | + | 8694:4539-4558 | MS.gene07451:intergenic | 25.0% |
| !!! | AGTCTTATATGATGATTTTG+AGG | - | 8694:5501-5520 | MS.gene07451:intron | 25.0% |
| !!! | ATTTCTGTTCAGTTTTGATT+TGG | + | 8694:5779-5798 | MS.gene07451:intergenic | 25.0% |
| !!! | CGTTTCATTATGACATTTTT+TGG | - | 8694:5249-5268 | MS.gene07451:intron | 25.0% |
| !!! | GAATTGTTTTTAGTACTACT+CGG | + | 8694:5662-5681 | MS.gene07451:intergenic | 25.0% |
| !!! | TCAATACGTTTTAAAACTAC+CGG | - | 8694:5353-5372 | MS.gene07451:intron | 25.0% |
| !!! | TTCATTATGACATTTTTTGG+AGG | - | 8694:5252-5271 | MS.gene07451:intron | 25.0% |
| AAAATAAGGAGTTCAATCTG+TGG | + | 8694:6757-6776 | MS.gene07451:intergenic | 30.0% | |
| AAAGTTAAACTCCCTTTCAA+TGG | + | 8694:4271-4290 | MS.gene07451:intergenic | 30.0% | |
| AATAAGCTGAAAACAGCTTA+TGG | + | 8694:3813-3832 | MS.gene07451:intergenic | 30.0% | |
| ACTTCTATGATAAGCGTTTA+TGG | - | 8694:3936-3955 | MS.gene07451:intron | 30.0% | |
| ATCAATGTTCACGATATCAT+AGG | + | 8694:6596-6615 | MS.gene07451:intergenic | 30.0% | |
| ATGATAAAAGATGTTAGCAG+TGG | - | 8694:6245-6264 | MS.gene07451:intron | 30.0% | |
| ATTATGTATGAGAGGAGTTT+GGG | - | 8694:3469-3488 | MS.gene07451:CDS | 30.0% | |
| ATTCAATCATAAAACTGGTG+CGG | - | 8694:6040-6059 | MS.gene07451:intron | 30.0% | |
| ATTGTAAGACAAGCTTTCTT+TGG | + | 8694:3379-3398 | MS.gene07451:intergenic | 30.0% | |
| CACTGTTAGAATAAATCAGT+AGG | + | 8694:5970-5989 | MS.gene07451:intergenic | 30.0% | |
| CATTCAATAGATTACAACCT+TGG | + | 8694:5279-5298 | MS.gene07451:intergenic | 30.0% | |
| CGCATTAAACTAAACGTTAA+AGG | + | 8694:4088-4107 | MS.gene07451:intergenic | 30.0% | |
| CTTATTCTTCCATTTGATAC+AGG | - | 8694:6498-6517 | MS.gene07451:intron | 30.0% | |
| GAAGAATCTTCATGCATATT+TGG | + | 8694:4953-4972 | MS.gene07451:intergenic | 30.0% | |
| GAGAAATAGAAAAAACAAGC+AGG | - | 8694:5741-5760 | MS.gene07451:intron | 30.0% | |
| GATCATTGAAAATGCTTGTT+TGG | - | 8694:3420-3439 | MS.gene07451:CDS | 30.0% | |
| GATTTCACACAATGCTTTAA+CGG | + | 8694:3329-3348 | MS.gene07451:intergenic | 30.0% | |
| GGAACTATGACAATGTAATA+GGG | - | 8694:3670-3689 | MS.gene07451:CDS | 30.0% | |
| GGATTTCAAGAAAAAGGTTA+TGG | - | 8694:5417-5436 | MS.gene07451:intron | 30.0% | |
| GTAGTACTAAAAACAATTCG+GGG | - | 8694:5663-5682 | MS.gene07451:CDS | 30.0% | |
| GTATCAAATGGAAGAATAAG+AGG | + | 8694:6498-6517 | MS.gene07451:intergenic | 30.0% | |
| GTTAGAGGGGATATAAATAA+AGG | + | 8694:5901-5920 | MS.gene07451:intergenic | 30.0% | |
| GTTATATTAGTCAGTTAGAG+GGG | + | 8694:5914-5933 | MS.gene07451:intergenic | 30.0% | |
| TAATGACTTGAGTTCATCTA+TGG | + | 8694:4896-4915 | MS.gene07451:intergenic | 30.0% | |
| TAGAAAGCTGTATCATTCTT+CGG | - | 8694:7050-7069 | MS.gene07451:CDS | 30.0% | |
| TATGATCAAGCTACGTTAAT+TGG | + | 8694:5329-5348 | MS.gene07451:intergenic | 30.0% | |
| TATTATGTATGAGAGGAGTT+TGG | - | 8694:3468-3487 | MS.gene07451:CDS | 30.0% | |
| TCCAACAAAATAGTATACAC+CGG | + | 8694:5375-5394 | MS.gene07451:intergenic | 30.0% | |
| TCCAGATTCAATCATAAAAC+TGG | - | 8694:6035-6054 | MS.gene07451:intron | 30.0% | |
| TCTATGGATAAAACTGAGAA+AGG | - | 8694:6158-6177 | MS.gene07451:intron | 30.0% | |
| TGGAACTATGACAATGTAAT+AGG | - | 8694:3669-3688 | MS.gene07451:CDS | 30.0% | |
| TGGTTTAAATGGAAGAACTA+AGG | - | 8694:5477-5496 | MS.gene07451:intron | 30.0% | |
| TTCAAAATACGAAAGCTTCA+AGG | + | 8694:4145-4164 | MS.gene07451:intergenic | 30.0% | |
| TTCTGATCTCTTATCATTGT+AGG | - | 8694:4551-4570 | MS.gene07451:intron | 30.0% | |
| TTCTTGGGATTTCAAGAAAA+AGG | - | 8694:5411-5430 | MS.gene07451:intron | 30.0% | |
| ! | AAGATAAAACTTTTGCGAAG+AGG | + | 8694:5829-5848 | MS.gene07451:intergenic | 30.0% |
| ! | AGATAAAGCTTTTGTCTATG+AGG | - | 8694:4588-4607 | MS.gene07451:intron | 30.0% |
| ! | AGTTATCTTGGTGGTTTAAA+TGG | - | 8694:5466-5485 | MS.gene07451:intron | 30.0% |
| ! | ATAGATGATTACCATGGTTT+TGG | - | 8694:4730-4749 | MS.gene07451:intron | 30.0% |
| ! | ATGATATTGAGGCATTAGAA+AGG | - | 8694:7010-7029 | MS.gene07451:CDS | 30.0% |
| ! | ATGTTGTATGTGGTTTGTAT+AGG | - | 8694:5586-5605 | MS.gene07451:CDS | 30.0% |
| ! | CAAAGCATCACAAATTTCTT+TGG | + | 8694:6938-6957 | MS.gene07451:intergenic | 30.0% |
| ! | CTCGAAATATTCAGAGTTTT+CGG | + | 8694:6716-6735 | MS.gene07451:intergenic | 30.0% |
| ! | TAGCTTGCAATTAGTTATCT+TGG | - | 8694:5454-5473 | MS.gene07451:intron | 30.0% |
| ! | TCGAGAAGAAATAAGACTTT+TGG | + | 8694:4701-4720 | MS.gene07451:intergenic | 30.0% |
| ! | TGATATCGTGAACATTGATT+TGG | - | 8694:6597-6616 | MS.gene07451:intron | 30.0% |
| ! | TTTCACGACTCTTCTTTTTA+AGG | - | 8694:4467-4486 | MS.gene07451:intron | 30.0% |
| !! | ACCAGTTTTATGATTGAATC+TGG | + | 8694:6039-6058 | MS.gene07451:intergenic | 30.0% |
| !! | CTACTGATTTATTCTAACAG+TGG | - | 8694:5968-5987 | MS.gene07451:intron | 30.0% |
| !! | TGTATGGACTAGTAAAACTA+TGG | + | 8694:5085-5104 | MS.gene07451:intergenic | 30.0% |
| !! | TTTCTCAGTTTTATCCATAG+AGG | + | 8694:6159-6178 | MS.gene07451:intergenic | 30.0% |
| !!! | AGTTTTGATTTGGCGATAAA+AGG | + | 8694:5769-5788 | MS.gene07451:intergenic | 30.0% |
| AAAAATTGGCAGAAGAGACA+AGG | - | 8694:4394-4413 | MS.gene07451:intron | 35.0% | |
| AAATCAGTAGGGCAGAATAA+GGG | + | 8694:5958-5977 | MS.gene07451:intergenic | 35.0% | |
| AAGCTTAACTCGGAATTCTT+TGG | - | 8694:4655-4674 | MS.gene07451:intron | 35.0% | |
| ACTAGCTCAAAATTCCTCTA+TGG | - | 8694:6142-6161 | MS.gene07451:intron | 35.0% | |
| AGAACCTTCAAAGCTTAACT+CGG | - | 8694:4645-4664 | MS.gene07451:intron | 35.0% | |
| ATTCACATTTCAATGAACCC+CGG | + | 8694:4217-4236 | MS.gene07451:intergenic | 35.0% | |
| ATTGAAAATGCTTGTTTGGG+TGG | - | 8694:3424-3443 | MS.gene07451:CDS | 35.0% | |
| CTTGCAATTAGTTATCTTGG+TGG | - | 8694:5457-5476 | MS.gene07451:intron | 35.0% | |
| GACATAAACATTTGTGAGAC+TGG | - | 8694:3753-3772 | MS.gene07451:CDS | 35.0% | |
| TAAATCAGTAGGGCAGAATA+AGG | + | 8694:5959-5978 | MS.gene07451:intergenic | 35.0% | |
| TTCGAGATAGATGATTACCA+TGG | - | 8694:4724-4743 | MS.gene07451:intron | 35.0% | |
| TTCGTTGTTAGAAGACAAAG+CGG | + | 8694:6081-6100 | MS.gene07451:intergenic | 35.0% | |
| TTTAGAGAGCTTATGGAAAC+AGG | - | 8694:3776-3795 | MS.gene07451:CDS | 35.0% | |
| ! | AATTCCGAGTTAAGCTTTGA+AGG | + | 8694:4652-4671 | MS.gene07451:intergenic | 35.0% |
| ! | ACCGGTGTATACTATTTTGT+TGG | - | 8694:5371-5390 | MS.gene07451:intron | 35.0% |
| ! | ATTTGTTCTTTTGCAGTTGC+AGG | + | 8694:5225-5244 | MS.gene07451:intergenic | 35.0% |
| ! | CCATTCAGAATCCTTTTCTT+CGG | - | 8694:5003-5022 | MS.gene07451:intron | 35.0% |
| ! | CTGTTGCTATTATGTATGAG+AGG | - | 8694:3461-3480 | MS.gene07451:CDS | 35.0% |
| ! | GGAGTATTCTTCAATTACTG+AGG | - | 8694:6196-6215 | MS.gene07451:intron | 35.0% |
| ! | GTTTGTTGATTGCGAGTAAA+GGG | - | 8694:3697-3716 | MS.gene07451:CDS | 35.0% |
| ! | TAACGGATATTCCTTCTTCT+GGG | + | 8694:3312-3331 | MS.gene07451:intergenic | 35.0% |
| ! | TGTTTGTTGATTGCGAGTAA+AGG | - | 8694:3696-3715 | MS.gene07451:CDS | 35.0% |
| ! | TTAACGGATATTCCTTCTTC+TGG | + | 8694:3313-3332 | MS.gene07451:intergenic | 35.0% |
| !! | TGATAAGGAAAAATGGGTTG+TGG | + | 8694:3174-3193 | MS.gene07451:intergenic | 35.0% |
| AAAGGCAAACATTCCTGTTG+AGG | + | 8694:3532-3551 | MS.gene07451:intergenic | 40.0% | |
| AACACAGACACGTAGATGAA+AGG | + | 8694:6289-6308 | MS.gene07451:intergenic | 40.0% | |
| AACGGATATTCCTTCTTCTG+GGG | + | 8694:3311-3330 | MS.gene07451:intergenic | 40.0% | |
| AAGAGTAGAAGAGTGACTAC+TGG | + | 8694:6440-6459 | MS.gene07451:intergenic | 40.0% | |
| AATAGCCTAACCTTCTCCAA+AGG | + | 8694:6684-6703 | MS.gene07451:intergenic | 40.0% | |
| AGAACCATAGTAATCACCAG+AGG | + | 8694:4787-4806 | MS.gene07451:intergenic | 40.0% | |
| AGAGAATATTCTACCCCTGT+TGG | - | 8694:4618-4637 | MS.gene07451:intron | 40.0% | |
| AGGAATGTTTGCCTTTGGTT+TGG | - | 8694:3536-3555 | MS.gene07451:CDS | 40.0% | |
| AGTTGAAAAGGGCAACAAAG+AGG | - | 8694:7166-7185 | MS.gene07451:intron | 40.0% | |
| ATAGCCTAACCTTCTCCAAA+GGG | + | 8694:6683-6702 | MS.gene07451:intergenic | 40.0% | |
| CCGAAGAAAAGGATTCTGAA+TGG | + | 8694:5006-5025 | MS.gene07451:intergenic | 40.0% | |
| CTCTTACTTCTCCGAAGAAA+AGG | + | 8694:5017-5036 | MS.gene07451:intergenic | 40.0% | |
| CTGGAAAGCAATGTTGTATG+TGG | - | 8694:5576-5595 | MS.gene07451:CDS | 40.0% | |
| GAGAATAGAATTCTCCCCAA+GGG | - | 8694:5800-5819 | MS.gene07451:intron | 40.0% | |
| GAGCAACACATTGCAATTTG+TGG | - | 8694:3282-3301 | MS.gene07451:CDS | 40.0% | |
| GAGTAAAGGGTTGTTTGTGT+TGG | - | 8694:3710-3729 | MS.gene07451:CDS | 40.0% | |
| GCATTGTGTGAAATCAATGC+AGG | - | 8694:3334-3353 | MS.gene07451:CDS | 40.0% | |
| GCTTGTTTGGGTGGTTATTT+GGG | - | 8694:3433-3452 | MS.gene07451:CDS | 40.0% | |
| GTCTTCTAACAACGAATCTG+AGG | - | 8694:6085-6104 | MS.gene07451:intron | 40.0% | |
| GTTGAAAAGGGCAACAAAGA+GGG | - | 8694:7167-7186 | MS.gene07451:intron | 40.0% | |
| TAACTCGGAATTCTTTGGTG+TGG | - | 8694:4660-4679 | MS.gene07451:intron | 40.0% | |
| TCAACAGGAATGTTTGCCTT+TGG | - | 8694:3531-3550 | MS.gene07451:CDS | 40.0% | |
| TCTGGAGAAGACAGTGTTAT+AGG | + | 8694:6021-6040 | MS.gene07451:intergenic | 40.0% | |
| TCTTCAACACTCCAAACCAA+AGG | + | 8694:3550-3569 | MS.gene07451:intergenic | 40.0% | |
| TGAAATCAATGCAGGTGATG+TGG | - | 8694:3342-3361 | MS.gene07451:CDS | 40.0% | |
| TGAGAATAGAATTCTCCCCA+AGG | - | 8694:5799-5818 | MS.gene07451:intron | 40.0% | |
| TGAGGATGATACTTCAATGC+TGG | - | 8694:6214-6233 | MS.gene07451:intron | 40.0% | |
| TGATACTTCAATGCTGGAGA+TGG | - | 8694:6220-6239 | MS.gene07451:intron | 40.0% | |
| TGCTTGTTTGGGTGGTTATT+TGG | - | 8694:3432-3451 | MS.gene07451:CDS | 40.0% | |
| TTAGTACTACTCGGTCAGAT+TGG | + | 8694:5653-5672 | MS.gene07451:intergenic | 40.0% | |
| TTCACATTTCAATGAACCCC+GGG | + | 8694:4216-4235 | MS.gene07451:intergenic | 40.0% | |
| ! | AAGCTTTTGTCTATGAGGAC+TGG | - | 8694:4593-4612 | MS.gene07451:intron | 40.0% |
| ! | ATTTGGAACTGGTACTTCAG+TGG | - | 8694:6614-6633 | MS.gene07451:intron | 40.0% |
| ! | GCTGCTTTGCTACATAGATA+TGG | - | 8694:6550-6569 | MS.gene07451:intron | 40.0% |
| ! | TGAAGTCCAATGGATTCGAA+TGG | - | 8694:3260-3279 | MS.gene07451:CDS | 40.0% |
| ! | TTGTGATGCTTTGTTGTCAC+TGG | - | 8694:6945-6964 | MS.gene07451:CDS | 40.0% |
| !! | AGACTGGTTTAGAGAGCTTA+TGG | - | 8694:3769-3788 | MS.gene07451:CDS | 40.0% |
| !! | CGTGAACATTGATTTGGAAC+TGG | - | 8694:6603-6622 | MS.gene07451:intron | 40.0% |
| !! | TGAAGGTTCTGAATCCAACA+GGG | + | 8694:4635-4654 | MS.gene07451:intergenic | 40.0% |
| !! | TTGAAGGTTCTGAATCCAAC+AGG | + | 8694:4636-4655 | MS.gene07451:intergenic | 40.0% |
| !!! | TGACATTTTTTGGAGGTCCA+AGG | - | 8694:5259-5278 | MS.gene07451:intron | 40.0% |
| !!! | TGATTACCATGGTTTTGGCA+TGG | - | 8694:4735-4754 | MS.gene07451:intron | 40.0% |
| AAGCGATGGATGAAGTCCAA+TGG | - | 8694:3250-3269 | MS.gene07451:CDS | 45.0% | |
| AGATCTGTAAGTGAAGCCTC+TGG | - | 8694:4768-4787 | MS.gene07451:intron | 45.0% | |
| ATACTCTTGATCTGCTGTGG+CGG | + | 8694:6660-6679 | MS.gene07451:intergenic | 45.0% | |
| CTTCACTTACAGATCTGCCA+GGG | + | 8694:4764-4783 | MS.gene07451:intergenic | 45.0% | |
| CTTGCAGCACATGGTTATCA+AGG | + | 8694:5202-5221 | MS.gene07451:intergenic | 45.0% | |
| GAAGCCTCTGGTGATTACTA+TGG | - | 8694:4780-4799 | MS.gene07451:intron | 45.0% | |
| GACTGATCATCACTTTCCAG+TGG | + | 8694:6327-6346 | MS.gene07451:intergenic | 45.0% | |
| GAGGTGTAAACATGCATACC+TGG | + | 8694:3139-3158 | MS.gene07451:intergenic | 45.0% | |
| GATATGAGGGAGAGTCTCTA+TGG | - | 8694:6970-6989 | MS.gene07451:CDS | 45.0% | |
| GTTGCTCCATTCGAATCCAT+TGG | + | 8694:3269-3288 | MS.gene07451:intergenic | 45.0% | |
| GTTTACGTGCATTCAAGCGA+TGG | - | 8694:3236-3255 | MS.gene07451:CDS | 45.0% | |
| TGCCGGGAAGAAGTTGAAAA+GGG | - | 8694:7155-7174 | MS.gene07451:intron | 45.0% | |
| TTCACTTACAGATCTGCCAG+GGG | + | 8694:4763-4782 | MS.gene07451:intergenic | 45.0% | |
| TTTGCGAAGAGGAAACCCTT+GGG | + | 8694:5818-5837 | MS.gene07451:intergenic | 45.0% | |
| ! | GTATCCCTTTGGAGAAGGTT+AGG | - | 8694:6676-6695 | MS.gene07451:intron | 45.0% |
| ! | GTTGTCACTGGCTGATATGA+GGG | - | 8694:6957-6976 | MS.gene07451:CDS | 45.0% |
| ! | TCTTCAGCTTTTGCCTCAAC+AGG | - | 8694:3516-3535 | MS.gene07451:CDS | 45.0% |
| ! | TGCCCTTTTCAACTTCTTCC+CGG | + | 8694:7160-7179 | MS.gene07451:intergenic | 45.0% |
| ! | TGTTGTCACTGGCTGATATG+AGG | - | 8694:6956-6975 | MS.gene07451:CDS | 45.0% |
| ! | TTTTGCGAAGAGGAAACCCT+TGG | + | 8694:5819-5838 | MS.gene07451:intergenic | 45.0% |
| !! | ATTACCAATCCTAGCTCTGC+CGG | - | 8694:7138-7157 | MS.gene07451:intron | 45.0% |
| !! | CAAGAGTATCCCTTTGGAGA+AGG | - | 8694:6671-6690 | MS.gene07451:intron | 45.0% |
| !! | GAAAGGCGTTGATAGCGAAA+TGG | - | 8694:6175-6194 | MS.gene07451:intron | 45.0% |
| !! | GAAGGTTCTGAATCCAACAG+GGG | + | 8694:4634-4653 | MS.gene07451:intergenic | 45.0% |
| !! | GCAGATCAAGAGTATCCCTT+TGG | - | 8694:6665-6684 | MS.gene07451:intron | 45.0% |
| !! | GGTTTGGAGTGTTGAAGAAG+TGG | - | 8694:3552-3571 | MS.gene07451:CDS | 45.0% |
| !! | TGCTCTTCATTTGCTATGCC+CGG | - | 8694:4195-4214 | MS.gene07451:CDS | 45.0% |
| !!! | TTCAGAGTTTTCGGTGTCAC+TGG | + | 8694:6707-6726 | MS.gene07451:intergenic | 45.0% |
| !! | AATAATAATAATAATAATTG+TGG | - | 8694:5118-5137 | MS.gene07451:intron | 5.0% |
| AGATGTTAGCAGTGGAGCTG+AGG | - | 8694:6253-6272 | MS.gene07451:intron | 50.0% | |
| AGCTGAAGATAACCCTCCCA+AGG | + | 8694:3505-3524 | MS.gene07451:intergenic | 50.0% | |
| CGGTTCTGCGTATCAGTGAA+AGG | - | 8694:7070-7089 | MS.gene07451:CDS | 50.0% | |
| CTGCCGGGAAGAAGTTGAAA+AGG | - | 8694:7154-7173 | MS.gene07451:intron | 50.0% | |
| GCTCAGTACCACACAAAAGC+TGG | + | 8694:3579-3598 | MS.gene07451:intergenic | 50.0% | |
| GCTTCACTTACAGATCTGCC+AGG | + | 8694:4765-4784 | MS.gene07451:intergenic | 50.0% | |
| GGGATACTCTTGATCTGCTG+TGG | + | 8694:6663-6682 | MS.gene07451:intergenic | 50.0% | |
| GTATGAGAGGAGTTTGGGTG+AGG | - | 8694:3474-3493 | MS.gene07451:CDS | 50.0% | |
| GTTGTGGCGAAAATCGAGAG+AGG | + | 8694:3158-3177 | MS.gene07451:intergenic | 50.0% | |
| TTGCGAAGAGGAAACCCTTG+GGG | + | 8694:5817-5836 | MS.gene07451:intergenic | 50.0% | |
| TTTGGGTGAGGAGTCTCCTT+GGG | - | 8694:3486-3505 | MS.gene07451:CDS | 50.0% | |
| TTTGTGGACACCCCAGAAGA+AGG | - | 8694:3298-3317 | MS.gene07451:CDS | 50.0% | |
| ! | GAAGTGGACCAGCTTTTGTG+TGG | - | 8694:3568-3587 | MS.gene07451:CDS | 50.0% |
| ! | GTGTGGTACTGAGCTTCATC+AGG | - | 8694:3585-3604 | MS.gene07451:CDS | 50.0% |
| !! | CTCTTCATTTGCTATGCCCG+GGG | - | 8694:4197-4216 | MS.gene07451:CDS | 50.0% |
| !! | GCTCTTCATTTGCTATGCCC+GGG | - | 8694:4196-4215 | MS.gene07451:CDS | 50.0% |
| !! | TTACCAATCCTAGCTCTGCC+GGG | - | 8694:7139-7158 | MS.gene07451:intron | 50.0% |
| AACTTCTTCCCGGCAGAGCT+AGG | + | 8694:7150-7169 | MS.gene07451:intergenic | 55.0% | |
| AGTTGCAGGCTTGCAGCACA+TGG | + | 8694:5211-5230 | MS.gene07451:intergenic | 55.0% | |
| GGGGAACCATGCCAAAACCA+TGG | + | 8694:4744-4763 | MS.gene07451:intergenic | 55.0% | |
| GTTTGGGTGAGGAGTCTCCT+TGG | - | 8694:3485-3504 | MS.gene07451:CDS | 55.0% | |
| TCTTGATCTGCTGTGGCGGT+TGG | + | 8694:6656-6675 | MS.gene07451:intergenic | 55.0% | |
| !!! | TGGTTTTGGCATGGTTCCCC+TGG | - | 8694:4744-4763 | MS.gene07451:intron | 55.0% |
| CTTCCCGGCAGAGCTAGGAT+TGG | + | 8694:7145-7164 | MS.gene07451:intergenic | 60.0% | |
| GGTGAGGAGTCTCCTTGGGA+GGG | - | 8694:3490-3509 | MS.gene07451:CDS | 60.0% | |
| GGGTGAGGAGTCTCCTTGGG+AGG | - | 8694:3489-3508 | MS.gene07451:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 8694 | gene | 3129 | 7197 | 3129 | ID=MS.gene07451 |
| 8694 | mRNA | 3129 | 7197 | 3129 | ID=MS.gene07451.t1;Parent=MS.gene07451 |
| 8694 | exon | 7187 | 7197 | 7187 | ID=MS.gene07451.t1.exon1;Parent=MS.gene07451.t1 |
| 8694 | CDS | 7187 | 7197 | 7187 | ID=cds.MS.gene07451.t1;Parent=MS.gene07451.t1 |
| 8694 | exon | 6720 | 7092 | 6720 | ID=MS.gene07451.t1.exon2;Parent=MS.gene07451.t1 |
| 8694 | CDS | 6720 | 7092 | 6720 | ID=cds.MS.gene07451.t1;Parent=MS.gene07451.t1 |
| 8694 | exon | 5553 | 5749 | 5553 | ID=MS.gene07451.t1.exon3;Parent=MS.gene07451.t1 |
| 8694 | CDS | 5553 | 5749 | 5553 | ID=cds.MS.gene07451.t1;Parent=MS.gene07451.t1 |
| 8694 | exon | 4052 | 4286 | 4052 | ID=MS.gene07451.t1.exon4;Parent=MS.gene07451.t1 |
| 8694 | CDS | 4052 | 4286 | 4052 | ID=cds.MS.gene07451.t1;Parent=MS.gene07451.t1 |
| 8694 | exon | 3129 | 3806 | 3129 | ID=MS.gene07451.t1.exon5;Parent=MS.gene07451.t1 |
| 8694 | CDS | 3129 | 3806 | 3129 | ID=cds.MS.gene07451.t1;Parent=MS.gene07451.t1 |
| Gene Sequence |
| Protein sequence |
