Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07546.t1 | XP_004495541.1 | 88.4 | 795 | 87 | 3 | 1 | 791 | 1 | 794 | 0.00E+00 | 1282.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07546.t1 | Q55GS2 | 36.7 | 610 | 351 | 13 | 9 | 607 | 7 | 592 | 2.3e-105 | 384.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07546.t1 | A0A1S2XWA4 | 88.4 | 795 | 87 | 3 | 1 | 791 | 1 | 794 | 0.0e+00 | 1282.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07546.t1 | MTR_6g086565 | 86.951 | 797 | 96 | 4 | 1 | 790 | 1 | 796 | 0.0 | 1350 |
MS.gene07546.t1 | MTR_6g086565 | 91.115 | 619 | 54 | 1 | 1 | 618 | 1 | 619 | 0.0 | 1117 |
MS.gene07546.t1 | MTR_1g078330 | 94.211 | 190 | 11 | 0 | 1 | 190 | 1 | 190 | 3.14e-128 | 381 |
MS.gene07546.t1 | MTR_1g078370 | 89.320 | 206 | 21 | 1 | 586 | 791 | 1 | 205 | 1.38e-112 | 340 |
MS.gene07546.t1 | MTR_4g030910 | 22.004 | 559 | 371 | 11 | 58 | 576 | 96 | 629 | 3.23e-24 | 109 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07546.t1 | AT2G40730 | 73.750 | 800 | 199 | 7 | 1 | 791 | 1 | 798 | 0.0 | 1112 |
MS.gene07546.t1 | AT1G22870 | 20.677 | 561 | 376 | 12 | 58 | 576 | 96 | 629 | 2.03e-17 | 87.4 |
MS.gene07546.t1 | AT1G71410 | 21.368 | 468 | 307 | 10 | 58 | 483 | 96 | 544 | 2.17e-17 | 87.4 |
MS.gene07546.t1 | AT1G71410 | 21.368 | 468 | 307 | 10 | 58 | 483 | 96 | 544 | 2.17e-17 | 87.4 |
MS.gene07546.t1 | AT1G22870 | 20.677 | 561 | 376 | 12 | 58 | 576 | 96 | 629 | 2.50e-17 | 87.4 |
MS.gene07546.t1 | AT1G22870 | 21.064 | 470 | 331 | 9 | 133 | 576 | 9 | 464 | 3.67e-16 | 83.6 |
Find 201 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCGACATCTGCCAGCTAATA+AGG | 0.143427 | 1.2:+62305853 | None:intergenic |
CTCCATGGGCTATTGATTCT+TGG | 0.178934 | 1.2:-62314183 | MS.gene07546:CDS |
ATCCGCTGAGCACCTAATTT+TGG | 0.180093 | 1.2:+62305812 | None:intergenic |
TTAGCTTCTTCCCTTGAATT+TGG | 0.192208 | 1.2:-62311421 | MS.gene07546:CDS |
GCTCAACTTTGGTGTAGTTT+TGG | 0.206962 | 1.2:+62306024 | None:intergenic |
GATCAGAAGGTTTGCCCTTC+AGG | 0.257610 | 1.2:+62307457 | None:intergenic |
AAACCTGCTGCTCCAAAATT+AGG | 0.271088 | 1.2:-62305824 | MS.gene07546:CDS |
CTGATGATGCTGCTGCTGCC+CGG | 0.276113 | 1.2:-62305916 | MS.gene07546:CDS |
CCTTGTCTGTGTCATTATTA+AGG | 0.278895 | 1.2:-62309583 | MS.gene07546:CDS |
ATCTTGATTGTCAGGCATTA+TGG | 0.280054 | 1.2:-62308908 | MS.gene07546:intron |
CCAAGTAAACTTGCATTTGC+TGG | 0.285117 | 1.2:+62307802 | None:intergenic |
TTATCAGACAATGGCATTAC+AGG | 0.290598 | 1.2:+62315592 | None:intergenic |
TCTTAAGTCCATGTTAGTTC+TGG | 0.291164 | 1.2:-62310937 | MS.gene07546:CDS |
CCAGCAAATGCAAGTTTACT+TGG | 0.294717 | 1.2:-62307802 | MS.gene07546:CDS |
TCCATGGGCTATTGATTCTT+GGG | 0.300838 | 1.2:-62314182 | MS.gene07546:CDS |
ATTGCGAGTACAACAACTTT+AGG | 0.305398 | 1.2:+62308829 | None:intergenic |
GCCATTGTCTGATAAGATTA+AGG | 0.305932 | 1.2:-62315584 | MS.gene07546:CDS |
CTCCAACATATTGATCAATA+TGG | 0.316335 | 1.2:-62311175 | MS.gene07546:CDS |
CTTTGTTTGTTGCAGGTTCA+TGG | 0.323800 | 1.2:-62314861 | MS.gene07546:intron |
TTAAATACATCAAAGCTTAT+AGG | 0.326017 | 1.2:-62312499 | MS.gene07546:CDS |
TTCAGTAGCCACTGGTAATC+TGG | 0.327264 | 1.2:+62312541 | None:intergenic |
TGATGATGCTGCTGCTGCCC+GGG | 0.340046 | 1.2:-62305915 | MS.gene07546:CDS |
AAACAGTGATGTTCGATCTA+AGG | 0.351656 | 1.2:-62308681 | MS.gene07546:intron |
ATACCGTTTGTCTGTGAAAC+AGG | 0.352541 | 1.2:+62306547 | None:intergenic |
ACTCTTCCGCTTGGGGCTCT+TGG | 0.355024 | 1.2:-62316160 | MS.gene07546:CDS |
TTGGCCCTTGTAGTGGGTGC+AGG | 0.364858 | 1.2:+62305878 | None:intergenic |
AGCTCAAGCTGTTGATGAAC+AGG | 0.365464 | 1.2:-62311140 | MS.gene07546:intron |
GAGATCGTTGAGGCCAGTTC+TGG | 0.374121 | 1.2:+62316205 | None:intergenic |
CGAACCTTACTCTTCCGCTT+GGG | 0.376689 | 1.2:-62316168 | MS.gene07546:CDS |
TCTGATAAGATTAAGGAGTT+AGG | 0.377819 | 1.2:-62315577 | MS.gene07546:CDS |
AGCAGAGCAGCTTCCTCGTC+AGG | 0.381631 | 1.2:-62311562 | MS.gene07546:CDS |
GTTTACCCTCATGTTGCTAC+TGG | 0.382745 | 1.2:-62310996 | MS.gene07546:CDS |
GGCTATTGATTCTTGGGGCA+TGG | 0.384497 | 1.2:-62314176 | MS.gene07546:CDS |
CGGATAATCCGGACACCATC+CGG | 0.385981 | 1.2:-62305794 | MS.gene07546:CDS |
GGTAGACACAATACATTTCA+TGG | 0.388081 | 1.2:-62311646 | MS.gene07546:CDS |
CAGGAGCTGCACTGGCAGCC+CGG | 0.389163 | 1.2:+62305897 | None:intergenic |
TCTTCATCCTTGCTCAACTT+TGG | 0.389388 | 1.2:+62306013 | None:intergenic |
TAAATACATCAAAGCTTATA+GGG | 0.395239 | 1.2:-62312498 | MS.gene07546:CDS |
TAAGGTTCGCCGATGATGTA+TGG | 0.398079 | 1.2:+62316182 | None:intergenic |
AAGGCATCTATCAACGTTAC+AGG | 0.399522 | 1.2:-62309564 | MS.gene07546:intron |
GCAAAGAGTTTAATTATTGT+TGG | 0.401711 | 1.2:+62311229 | None:intergenic |
TAGGGATGAATATTATGCTT+GGG | 0.402454 | 1.2:-62315019 | MS.gene07546:CDS |
CTTCTACATCGACCGATGAC+TGG | 0.404927 | 1.2:-62306708 | MS.gene07546:CDS |
TGACGTTAATTTCAGGATGA+TGG | 0.406739 | 1.2:-62316057 | MS.gene07546:intron |
TGAAGAAACGACAAAATATT+CGG | 0.412071 | 1.2:+62315679 | None:intergenic |
GCTATTGATTCTTGGGGCAT+GGG | 0.415585 | 1.2:-62314175 | MS.gene07546:intron |
CTAATCTATGAGCTATTCTC+TGG | 0.420107 | 1.2:-62312741 | MS.gene07546:CDS |
TCAAGGGAAGAAGCTAATAA+AGG | 0.423515 | 1.2:+62311427 | None:intergenic |
CTTATTAGCTGGCAGATGTC+GGG | 0.427658 | 1.2:-62305852 | MS.gene07546:CDS |
CAGCTCCTGCACCCACTACA+AGG | 0.431470 | 1.2:-62305883 | MS.gene07546:CDS |
GTAGTGTTTGTTCTAATAGC+TGG | 0.431616 | 1.2:+62309244 | None:intergenic |
TGTTGTTGTCACACAAACTT+TGG | 0.433282 | 1.2:-62314820 | MS.gene07546:CDS |
TTGAGCAAAACAGAGGAGTT+AGG | 0.433431 | 1.2:-62312711 | MS.gene07546:CDS |
TGGAGCTAGCAAAATCTGAT+TGG | 0.442498 | 1.2:-62314225 | MS.gene07546:CDS |
TGTGAAACAGGTTGAGAAAC+TGG | 0.443024 | 1.2:+62306559 | None:intergenic |
TTCTACATCGACCGATGACT+GGG | 0.443182 | 1.2:-62306707 | MS.gene07546:CDS |
GTTACACCCCGGATGGTGTC+CGG | 0.443226 | 1.2:+62305786 | None:intergenic |
TTTGTAGGTGTATCCAGAAC+TGG | 0.443352 | 1.2:-62316218 | MS.gene07546:CDS |
ATCAGAAGGTTTGCCCTTCA+GGG | 0.443698 | 1.2:+62307458 | None:intergenic |
TTTAACAATGCAGTCAAAGC+AGG | 0.444664 | 1.2:+62311385 | None:intergenic |
GGCTACTGAGGGTGCAGGAA+TGG | 0.445762 | 1.2:-62307839 | MS.gene07546:CDS |
GACACGGACAGCTCGATCAT+TGG | 0.450921 | 1.2:+62311204 | None:intergenic |
CTAGAACTCACAGAAGCAAC+TGG | 0.451326 | 1.2:+62307429 | None:intergenic |
TAGGTGCTCAGCGGATAATC+CGG | 0.458265 | 1.2:-62305805 | MS.gene07546:CDS |
GTAGGGATGAATATTATGCT+TGG | 0.463907 | 1.2:-62315020 | MS.gene07546:intron |
GAGCCCCAAGCGGAAGAGTA+AGG | 0.467212 | 1.2:+62316164 | None:intergenic |
CGACATCTGCCAGCTAATAA+GGG | 0.468806 | 1.2:+62305854 | None:intergenic |
ATTAAGGAGTTAGGTCTTGA+AGG | 0.470304 | 1.2:-62315568 | MS.gene07546:CDS |
CTCCATATTGATCAATATGT+TGG | 0.471473 | 1.2:+62311173 | None:intergenic |
GCATGGTGCTCACTGAAATC+TGG | 0.471654 | 1.2:+62306730 | None:intergenic |
GCTACTGAGGGTGCAGGAAT+GGG | 0.471680 | 1.2:-62307838 | MS.gene07546:CDS |
AGGAGCTGCACTGGCAGCCC+GGG | 0.473190 | 1.2:+62305898 | None:intergenic |
AGGTTTGCCCTTCAGGGTAA+AGG | 0.474908 | 1.2:+62307464 | None:intergenic |
TCTGCCAGCTAATAAGGGTT+TGG | 0.475549 | 1.2:+62305859 | None:intergenic |
ATTTAAAAGCTTGCGGAAGA+AGG | 0.476730 | 1.2:+62311587 | None:intergenic |
CATTAGAAGATGTTGGTGTA+AGG | 0.476759 | 1.2:+62307403 | None:intergenic |
GCGAACCTTACTCTTCCGCT+TGG | 0.476802 | 1.2:-62316169 | MS.gene07546:CDS |
TAAATAATAAATCACCTGTC+AGG | 0.481819 | 1.2:+62308802 | None:intergenic |
GCTTGAATGTTAGTAACAGC+TGG | 0.482855 | 1.2:+62306595 | None:intergenic |
TAAGGGTTTGGCCCTTGTAG+TGG | 0.484440 | 1.2:+62305871 | None:intergenic |
TTGCAAGCTACTTAAATGAA+AGG | 0.484946 | 1.2:-62309204 | MS.gene07546:CDS |
TTCCCACCTGCTAGAGGAGC+AGG | 0.485884 | 1.2:-62309022 | MS.gene07546:intron |
CAGCAGCTGAACCAAATTCA+AGG | 0.487704 | 1.2:+62311410 | None:intergenic |
GGAGCTAGCAAAATCTGATT+GGG | 0.491192 | 1.2:-62314224 | MS.gene07546:CDS |
TTGTCACACAAACTTTGGAC+TGG | 0.491456 | 1.2:-62314815 | MS.gene07546:CDS |
GGCAAAGCAACATTATGAAA+AGG | 0.492512 | 1.2:-62308627 | MS.gene07546:intron |
GGTTCATGGTAATGTTTGCT+TGG | 0.494401 | 1.2:-62314847 | MS.gene07546:CDS |
AGTGGGTGCAGGAGCTGCAC+TGG | 0.497903 | 1.2:+62305889 | None:intergenic |
TGCAAGCTACTTAAATGAAA+GGG | 0.501342 | 1.2:-62309203 | MS.gene07546:intron |
ACAAACACTACTATCTTGCT+AGG | 0.504745 | 1.2:-62309232 | MS.gene07546:CDS |
CTAATACCTGCTCCTCTAGC+AGG | 0.508317 | 1.2:+62309016 | None:intergenic |
CCTTATTAGCTGGCAGATGT+CGG | 0.509391 | 1.2:-62305853 | MS.gene07546:CDS |
GAACTCCTCAGCTGAAAGCC+AGG | 0.510223 | 1.2:+62311354 | None:intergenic |
AATTTCAGTGATGTGATAGT+TGG | 0.513156 | 1.2:+62308867 | None:intergenic |
TCGTCAGGTTGTGTTAAAGA+AGG | 0.517175 | 1.2:-62311547 | MS.gene07546:intron |
GATGTATTTAATCTATGAGA+AGG | 0.519986 | 1.2:+62312511 | None:intergenic |
TACTCGCAATTGATCCTGAC+AGG | 0.521305 | 1.2:-62308816 | MS.gene07546:intron |
GGATAATCCGGACACCATCC+GGG | 0.522099 | 1.2:-62305793 | MS.gene07546:CDS |
CTAGAGGCTACTGAGGGTGC+AGG | 0.523920 | 1.2:-62307844 | MS.gene07546:CDS |
ATTATCTGGAAGCAATGCTC+AGG | 0.525484 | 1.2:-62316013 | MS.gene07546:CDS |
GAACCTTACTCTTCCGCTTG+GGG | 0.525632 | 1.2:-62316167 | MS.gene07546:CDS |
AAGGGTTTGGCCCTTGTAGT+GGG | 0.526350 | 1.2:+62305872 | None:intergenic |
CATGTTAGTTCTGGCTCCAA+AGG | 0.527967 | 1.2:-62310928 | MS.gene07546:intron |
GTTGAGTCTGACCTTGGGAA+TGG | 0.528000 | 1.2:+62312677 | None:intergenic |
TGGTTCCTGGCTTTCAGCTG+AGG | 0.528164 | 1.2:-62311359 | MS.gene07546:CDS |
ATGATTAAGAATACCTGAGC+TGG | 0.529994 | 1.2:+62307380 | None:intergenic |
CTGCTAAATTTAAAAGCTTG+CGG | 0.531487 | 1.2:+62311580 | None:intergenic |
GTTAGCTTTGTCTCTTCAAG+TGG | 0.532990 | 1.2:+62306619 | None:intergenic |
CAGGATGGACATTTAGCTGC+GGG | 0.533267 | 1.2:-62315994 | MS.gene07546:CDS |
ATTTCAGGATGATGGTTCAC+CGG | 0.534597 | 1.2:-62316049 | MS.gene07546:intron |
CAGCAAATGCAAGTTTACTT+GGG | 0.535552 | 1.2:-62307801 | MS.gene07546:intron |
TTTGAAAGATAGTGTTGAGA+AGG | 0.537356 | 1.2:-62311613 | MS.gene07546:CDS |
ACCATCAAAAGTTTCAATCT+CGG | 0.539140 | 1.2:+62315651 | None:intergenic |
AGGGCCAAACCCTTATTAGC+TGG | 0.539562 | 1.2:-62305863 | MS.gene07546:CDS |
CATTTAGCTGCGGGTCGTAA+CGG | 0.539702 | 1.2:-62315985 | MS.gene07546:CDS |
CAACCTGTTTCACAGACAAA+CGG | 0.541648 | 1.2:-62306550 | MS.gene07546:intron |
TCATCATTGCGGCACTTCCA+AGG | 0.541975 | 1.2:-62316135 | MS.gene07546:intron |
AGTGATGTGATAGTTGGAAC+TGG | 0.542257 | 1.2:+62308873 | None:intergenic |
AGCTGAGGAGTTCCGTGTCA+AGG | 0.546667 | 1.2:-62311344 | MS.gene07546:intron |
ACACAGATAGGTGCTGTTGA+AGG | 0.547369 | 1.2:+62306763 | None:intergenic |
TGCTCCTCTAGCAGGTGGGA+AGG | 0.548410 | 1.2:+62309024 | None:intergenic |
GAGCCTGAAAACGACAAGGA+TGG | 0.549995 | 1.2:-62306658 | MS.gene07546:CDS |
ATGAGTTCCTTTACCCTGAA+GGG | 0.549995 | 1.2:-62307471 | MS.gene07546:CDS |
CATGATTGCAGCTGTCTCAA+AGG | 0.550211 | 1.2:-62309607 | MS.gene07546:intron |
AGCCTGAAAACGACAAGGAT+GGG | 0.550821 | 1.2:-62306657 | MS.gene07546:CDS |
GTCATTATTTAAGAAGCTCA+CGG | 0.554446 | 1.2:+62314975 | None:intergenic |
TTAACAATGCAGTCAAAGCA+GGG | 0.556437 | 1.2:+62311386 | None:intergenic |
TATGAGTTCCTTTACCCTGA+AGG | 0.558607 | 1.2:-62307472 | MS.gene07546:CDS |
AAGGTTCGCCGATGATGTAT+GGG | 0.558778 | 1.2:+62316183 | None:intergenic |
GCCATCCTCTACACAAATGT+TGG | 0.559317 | 1.2:-62314745 | MS.gene07546:intron |
CTGATAAAACATCAAAAGCA+TGG | 0.560392 | 1.2:+62314787 | None:intergenic |
CTTTGGAGCCAGAACTAACA+TGG | 0.562223 | 1.2:+62310929 | None:intergenic |
ACCAACATTTGTGTAGAGGA+TGG | 0.562363 | 1.2:+62314744 | None:intergenic |
CCATGGGCTATTGATTCTTG+GGG | 0.564788 | 1.2:-62314181 | MS.gene07546:CDS |
TTCTTTAACACAACCTGACG+AGG | 0.568235 | 1.2:+62311549 | None:intergenic |
AATTACCAACATTTGTGTAG+AGG | 0.569151 | 1.2:+62314740 | None:intergenic |
GCAACTGGAGCATGATCAGA+AGG | 0.569288 | 1.2:+62307444 | None:intergenic |
ATTGATCAATATGTTGGAGA+AGG | 0.569945 | 1.2:+62311179 | None:intergenic |
ACATCTTCTAATGCCAGCTC+AGG | 0.570241 | 1.2:-62307393 | MS.gene07546:intron |
TAATTAAGAAGTCTCCTCCA+TGG | 0.572719 | 1.2:-62314198 | MS.gene07546:CDS |
TGGAATTATTTACCTTGACA+CGG | 0.575289 | 1.2:+62311332 | None:intergenic |
ATTAGAAGATGTTGGTGTAA+GGG | 0.578476 | 1.2:+62307404 | None:intergenic |
ATTTAATCTATGAGAAGGCA+TGG | 0.578932 | 1.2:+62312516 | None:intergenic |
CTAACATTCAAGCAGATCAA+AGG | 0.580404 | 1.2:-62306585 | MS.gene07546:CDS |
TCCTTAATCTTATCAGACAA+TGG | 0.583323 | 1.2:+62315583 | None:intergenic |
CAATTTGGTTACACCCCGGA+TGG | 0.583507 | 1.2:+62305779 | None:intergenic |
TCTGGAAGCAATGCTCAGGA+TGG | 0.587647 | 1.2:-62316009 | MS.gene07546:CDS |
AATTAAGAAGTCTCCTCCAT+GGG | 0.594705 | 1.2:-62314197 | MS.gene07546:CDS |
AACGATCTCCCATACATCAT+CGG | 0.596683 | 1.2:-62316191 | MS.gene07546:CDS |
CCCCAAGAATCAATAGCCCA+TGG | 0.597737 | 1.2:+62314181 | None:intergenic |
AGGGATGAATATTATGCTTG+GGG | 0.600371 | 1.2:-62315018 | MS.gene07546:CDS |
GACAAATCTAGAGGCTACTG+AGG | 0.602695 | 1.2:-62307851 | MS.gene07546:CDS |
TTATTAGCTGGCAGATGTCG+GGG | 0.603167 | 1.2:-62305851 | MS.gene07546:CDS |
GCATGGACTTCAGTAGCCAC+TGG | 0.606637 | 1.2:+62312533 | None:intergenic |
TTTCCACTCAGCAATATGCA+TGG | 0.611555 | 1.2:-62314273 | MS.gene07546:intron |
GATACCTTCCCACCTGCTAG+AGG | 0.613062 | 1.2:-62309028 | MS.gene07546:CDS |
AGCAGCTGAACCAAATTCAA+GGG | 0.613419 | 1.2:+62311411 | None:intergenic |
GGCTCTTGGCTTCATCATTG+CGG | 0.614202 | 1.2:-62316146 | MS.gene07546:CDS |
ATACCTGCTCCTCTAGCAGG+TGG | 0.615836 | 1.2:+62309019 | None:intergenic |
CTGAAAACGACAAGGATGGG+TGG | 0.616271 | 1.2:-62306654 | MS.gene07546:CDS |
GGTGTGGAATTTACACAGAT+AGG | 0.620542 | 1.2:+62306751 | None:intergenic |
CTACATCGACCGATGACTGG+GGG | 0.621164 | 1.2:-62306705 | MS.gene07546:CDS |
TATGTTGGAGAAGGCTGACA+CGG | 0.621891 | 1.2:+62311188 | None:intergenic |
CTCTGCTTCCAGATTACCAG+TGG | 0.622113 | 1.2:-62312549 | MS.gene07546:CDS |
GAGTCTGACCTTGGGAATGG+AGG | 0.622811 | 1.2:+62312680 | None:intergenic |
TGAAAACGACAAGGATGGGT+GGG | 0.623050 | 1.2:-62306653 | MS.gene07546:CDS |
TGCAACACAGTACAAAGCAA+TGG | 0.623409 | 1.2:-62314245 | MS.gene07546:CDS |
ACGGACAGCTCGATCATTGG+AGG | 0.625109 | 1.2:+62311207 | None:intergenic |
AACTACACCAAAGTTGAGCA+AGG | 0.627445 | 1.2:-62306020 | MS.gene07546:CDS |
GTGCTCACTGAAATCTGGTG+TGG | 0.628815 | 1.2:+62306735 | None:intergenic |
GAGAAACCAGTAGCAACATG+AGG | 0.635595 | 1.2:+62310990 | None:intergenic |
CAACACTGCCTCCATTCCCA+AGG | 0.641438 | 1.2:-62312688 | MS.gene07546:intron |
AGCTCCTGCACCCACTACAA+GGG | 0.647903 | 1.2:-62305882 | MS.gene07546:CDS |
CGAGGAGCCTGAAAACGACA+AGG | 0.649330 | 1.2:-62306662 | MS.gene07546:CDS |
TCTCTTATAGACAAATCTAG+AGG | 0.654381 | 1.2:-62307860 | MS.gene07546:intron |
TACCTGCTCCTCTAGCAGGT+GGG | 0.654849 | 1.2:+62309020 | None:intergenic |
CATCGGTCGATGTAGAAGCA+TGG | 0.655685 | 1.2:+62306713 | None:intergenic |
GATAATCCGGACACCATCCG+GGG | 0.659235 | 1.2:-62305792 | MS.gene07546:CDS |
AGAAACCAGTAGCAACATGA+GGG | 0.659703 | 1.2:+62310991 | None:intergenic |
AGTTTGTGTGACAACAACAC+TGG | 0.661251 | 1.2:+62314824 | None:intergenic |
CTCCAAAATTAGGTGCTCAG+CGG | 0.663729 | 1.2:-62305814 | MS.gene07546:CDS |
ACATCACTGAAATTGCCACT+AGG | 0.665528 | 1.2:-62308858 | MS.gene07546:CDS |
TCTACATCGACCGATGACTG+GGG | 0.669051 | 1.2:-62306706 | MS.gene07546:CDS |
ACATTCAAGCAGATCAAAGG+CGG | 0.675162 | 1.2:-62306582 | MS.gene07546:CDS |
TACATCGACCGATGACTGGG+GGG | 0.676039 | 1.2:-62306704 | MS.gene07546:CDS |
GTGGCAATTTGGTTACACCC+CGG | 0.676908 | 1.2:+62305775 | None:intergenic |
TCAGGATGGACATTTAGCTG+CGG | 0.676966 | 1.2:-62315995 | MS.gene07546:CDS |
GAGCTGGCATTAGAAGATGT+TGG | 0.677571 | 1.2:+62307396 | None:intergenic |
CCTTAATAATGACACAGACA+AGG | 0.679867 | 1.2:+62309583 | None:intergenic |
TGATGTATGGGAGATCGTTG+AGG | 0.680011 | 1.2:+62316195 | None:intergenic |
TCAAAGCTTATAGGGAACAG+TGG | 0.680140 | 1.2:-62312490 | MS.gene07546:intron |
TAACAATGCAGTCAAAGCAG+GGG | 0.685519 | 1.2:+62311387 | None:intergenic |
TTTGAAGTTGAGCAAAACAG+AGG | 0.686400 | 1.2:-62312718 | MS.gene07546:CDS |
AACTTTAGGAAGAATCCTAG+TGG | 0.690479 | 1.2:+62308843 | None:intergenic |
ACAAATCTAGAGGCTACTGA+GGG | 0.693320 | 1.2:-62307850 | MS.gene07546:CDS |
TAGGTCTTGAAGGTGCACAA+AGG | 0.694786 | 1.2:-62315558 | MS.gene07546:intron |
ACTAGAGAATGGAATTGACG+AGG | 0.706515 | 1.2:-62306680 | MS.gene07546:CDS |
ATGAAGCCAAGAGCCCCAAG+CGG | 0.716170 | 1.2:+62316154 | None:intergenic |
GATGAAGATGATGATTTGTG+CGG | 0.742354 | 1.2:-62305998 | MS.gene07546:CDS |
GATGTGATAGTTGGAACTGG+TGG | 0.750173 | 1.2:+62308876 | None:intergenic |
CAAGAATCAATAGCCCATGG+AGG | 0.755344 | 1.2:+62314184 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 62305787 | 62316261 | 62305787 | ID=MS.gene07546 |
chr1.2 | mRNA | 62305787 | 62316261 | 62305787 | ID=MS.gene07546.t1;Parent=MS.gene07546 |
chr1.2 | exon | 62316136 | 62316261 | 62316136 | ID=MS.gene07546.t1.exon1;Parent=MS.gene07546.t1 |
chr1.2 | CDS | 62316136 | 62316261 | 62316136 | ID=cds.MS.gene07546.t1;Parent=MS.gene07546.t1 |
chr1.2 | exon | 62315966 | 62316064 | 62315966 | ID=MS.gene07546.t1.exon2;Parent=MS.gene07546.t1 |
chr1.2 | CDS | 62315966 | 62316064 | 62315966 | ID=cds.MS.gene07546.t1;Parent=MS.gene07546.t1 |
chr1.2 | exon | 62315559 | 62315710 | 62315559 | ID=MS.gene07546.t1.exon3;Parent=MS.gene07546.t1 |
chr1.2 | CDS | 62315559 | 62315710 | 62315559 | ID=cds.MS.gene07546.t1;Parent=MS.gene07546.t1 |
chr1.2 | exon | 62314966 | 62315038 | 62314966 | ID=MS.gene07546.t1.exon4;Parent=MS.gene07546.t1 |
chr1.2 | CDS | 62314966 | 62315038 | 62314966 | ID=cds.MS.gene07546.t1;Parent=MS.gene07546.t1 |
chr1.2 | exon | 62314746 | 62314868 | 62314746 | ID=MS.gene07546.t1.exon5;Parent=MS.gene07546.t1 |
chr1.2 | CDS | 62314746 | 62314868 | 62314746 | ID=cds.MS.gene07546.t1;Parent=MS.gene07546.t1 |
chr1.2 | exon | 62314176 | 62314284 | 62314176 | ID=MS.gene07546.t1.exon6;Parent=MS.gene07546.t1 |
chr1.2 | CDS | 62314176 | 62314284 | 62314176 | ID=cds.MS.gene07546.t1;Parent=MS.gene07546.t1 |
chr1.2 | exon | 62312689 | 62312768 | 62312689 | ID=MS.gene07546.t1.exon7;Parent=MS.gene07546.t1 |
chr1.2 | CDS | 62312689 | 62312768 | 62312689 | ID=cds.MS.gene07546.t1;Parent=MS.gene07546.t1 |
chr1.2 | exon | 62312491 | 62312572 | 62312491 | ID=MS.gene07546.t1.exon8;Parent=MS.gene07546.t1 |
chr1.2 | CDS | 62312491 | 62312572 | 62312491 | ID=cds.MS.gene07546.t1;Parent=MS.gene07546.t1 |
chr1.2 | exon | 62311548 | 62311687 | 62311548 | ID=MS.gene07546.t1.exon9;Parent=MS.gene07546.t1 |
chr1.2 | CDS | 62311548 | 62311687 | 62311548 | ID=cds.MS.gene07546.t1;Parent=MS.gene07546.t1 |
chr1.2 | exon | 62311345 | 62311455 | 62311345 | ID=MS.gene07546.t1.exon10;Parent=MS.gene07546.t1 |
chr1.2 | CDS | 62311345 | 62311455 | 62311345 | ID=cds.MS.gene07546.t1;Parent=MS.gene07546.t1 |
chr1.2 | exon | 62311141 | 62311257 | 62311141 | ID=MS.gene07546.t1.exon11;Parent=MS.gene07546.t1 |
chr1.2 | CDS | 62311141 | 62311257 | 62311141 | ID=cds.MS.gene07546.t1;Parent=MS.gene07546.t1 |
chr1.2 | exon | 62310929 | 62311018 | 62310929 | ID=MS.gene07546.t1.exon12;Parent=MS.gene07546.t1 |
chr1.2 | CDS | 62310929 | 62311018 | 62310929 | ID=cds.MS.gene07546.t1;Parent=MS.gene07546.t1 |
chr1.2 | exon | 62309565 | 62309618 | 62309565 | ID=MS.gene07546.t1.exon13;Parent=MS.gene07546.t1 |
chr1.2 | CDS | 62309565 | 62309618 | 62309565 | ID=cds.MS.gene07546.t1;Parent=MS.gene07546.t1 |
chr1.2 | exon | 62309204 | 62309278 | 62309204 | ID=MS.gene07546.t1.exon14;Parent=MS.gene07546.t1 |
chr1.2 | CDS | 62309204 | 62309278 | 62309204 | ID=cds.MS.gene07546.t1;Parent=MS.gene07546.t1 |
chr1.2 | exon | 62309023 | 62309098 | 62309023 | ID=MS.gene07546.t1.exon15;Parent=MS.gene07546.t1 |
chr1.2 | CDS | 62309023 | 62309098 | 62309023 | ID=cds.MS.gene07546.t1;Parent=MS.gene07546.t1 |
chr1.2 | exon | 62308817 | 62308916 | 62308817 | ID=MS.gene07546.t1.exon16;Parent=MS.gene07546.t1 |
chr1.2 | CDS | 62308817 | 62308916 | 62308817 | ID=cds.MS.gene07546.t1;Parent=MS.gene07546.t1 |
chr1.2 | exon | 62308628 | 62308697 | 62308628 | ID=MS.gene07546.t1.exon17;Parent=MS.gene07546.t1 |
chr1.2 | CDS | 62308628 | 62308697 | 62308628 | ID=cds.MS.gene07546.t1;Parent=MS.gene07546.t1 |
chr1.2 | exon | 62307802 | 62307872 | 62307802 | ID=MS.gene07546.t1.exon18;Parent=MS.gene07546.t1 |
chr1.2 | CDS | 62307802 | 62307872 | 62307802 | ID=cds.MS.gene07546.t1;Parent=MS.gene07546.t1 |
chr1.2 | exon | 62307394 | 62307500 | 62307394 | ID=MS.gene07546.t1.exon19;Parent=MS.gene07546.t1 |
chr1.2 | CDS | 62307394 | 62307500 | 62307394 | ID=cds.MS.gene07546.t1;Parent=MS.gene07546.t1 |
chr1.2 | exon | 62306551 | 62306796 | 62306551 | ID=MS.gene07546.t1.exon20;Parent=MS.gene07546.t1 |
chr1.2 | CDS | 62306551 | 62306796 | 62306551 | ID=cds.MS.gene07546.t1;Parent=MS.gene07546.t1 |
chr1.2 | exon | 62305787 | 62306061 | 62305787 | ID=MS.gene07546.t1.exon21;Parent=MS.gene07546.t1 |
chr1.2 | CDS | 62305787 | 62306061 | 62305787 | ID=cds.MS.gene07546.t1;Parent=MS.gene07546.t1 |
Gene Sequence |
Protein sequence |