Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07695.t1 | GAU32889.1 | 44.2 | 539 | 132 | 3 | 113 | 482 | 20 | 558 | 6.30E-120 | 441.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07695.t1 | Q9SZL8 | 29.6 | 216 | 145 | 5 | 144 | 353 | 69 | 283 | 2.4e-19 | 98.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07695.t1 | A0A2Z6NML7 | 44.2 | 539 | 132 | 3 | 113 | 482 | 20 | 558 | 4.5e-120 | 441.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene07695.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07695.t1 | MTR_1g070355 | 48.864 | 264 | 125 | 3 | 88 | 341 | 4 | 267 | 2.03e-76 | 253 |
| MS.gene07695.t1 | MTR_5g076070 | 36.170 | 188 | 120 | 0 | 153 | 340 | 58 | 245 | 2.04e-39 | 145 |
| MS.gene07695.t1 | MTR_6g022080 | 35.326 | 184 | 119 | 0 | 129 | 312 | 66 | 249 | 3.81e-38 | 141 |
| MS.gene07695.t1 | MTR_2g101460 | 48.592 | 142 | 69 | 1 | 112 | 253 | 23 | 160 | 9.85e-34 | 127 |
| MS.gene07695.t1 | MTR_2g101460 | 48.592 | 142 | 69 | 1 | 112 | 253 | 13 | 150 | 1.65e-33 | 127 |
| MS.gene07695.t1 | MTR_0060s0090 | 48.921 | 139 | 51 | 2 | 97 | 235 | 25 | 143 | 1.72e-33 | 125 |
| MS.gene07695.t1 | MTR_6g463250 | 48.507 | 134 | 48 | 2 | 107 | 234 | 41 | 159 | 1.62e-32 | 123 |
| MS.gene07695.t1 | MTR_7g446520 | 29.699 | 266 | 157 | 6 | 80 | 338 | 20 | 262 | 2.35e-27 | 113 |
| MS.gene07695.t1 | MTR_3g448650 | 46.429 | 112 | 56 | 1 | 112 | 223 | 50 | 157 | 2.63e-26 | 106 |
| MS.gene07695.t1 | MTR_1g052260 | 44.231 | 104 | 58 | 0 | 127 | 230 | 55 | 158 | 6.29e-25 | 101 |
| MS.gene07695.t1 | MTR_4g050510 | 38.583 | 127 | 64 | 1 | 159 | 285 | 89 | 201 | 4.10e-23 | 97.8 |
| MS.gene07695.t1 | MTR_6g053140 | 34.969 | 163 | 90 | 4 | 88 | 241 | 34 | 189 | 5.87e-22 | 94.7 |
| MS.gene07695.t1 | MTR_7g028855 | 29.148 | 223 | 150 | 5 | 75 | 291 | 43 | 263 | 1.72e-19 | 92.0 |
| MS.gene07695.t1 | MTR_8g066350 | 33.858 | 127 | 66 | 1 | 127 | 253 | 58 | 166 | 1.22e-17 | 81.3 |
| MS.gene07695.t1 | MTR_0402s0040 | 31.548 | 168 | 107 | 5 | 152 | 317 | 32 | 193 | 3.99e-16 | 81.6 |
| MS.gene07695.t1 | MTR_0604s0020 | 43.243 | 74 | 42 | 0 | 159 | 232 | 3 | 76 | 8.54e-16 | 72.8 |
| MS.gene07695.t1 | MTR_7g446480 | 36.207 | 116 | 72 | 1 | 225 | 338 | 140 | 255 | 6.79e-15 | 76.3 |
| MS.gene07695.t1 | MTR_7g446510 | 36.207 | 116 | 72 | 1 | 225 | 338 | 155 | 270 | 1.82e-13 | 72.4 |
| MS.gene07695.t1 | MTR_6g051425 | 28.061 | 196 | 129 | 6 | 158 | 345 | 27 | 218 | 3.33e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07695.t1 | AT4G38180 | 29.796 | 245 | 158 | 8 | 152 | 389 | 77 | 314 | 1.32e-17 | 87.0 |
| MS.gene07695.t1 | AT5G28530 | 33.750 | 160 | 102 | 3 | 154 | 310 | 61 | 219 | 1.99e-16 | 83.2 |
| MS.gene07695.t1 | AT5G28530 | 33.750 | 160 | 102 | 3 | 154 | 310 | 61 | 219 | 2.00e-16 | 83.2 |
| MS.gene07695.t1 | AT5G28530 | 33.750 | 160 | 102 | 3 | 154 | 310 | 61 | 219 | 2.22e-16 | 83.2 |
| MS.gene07695.t1 | AT5G28530 | 33.750 | 160 | 102 | 3 | 154 | 310 | 61 | 219 | 2.43e-16 | 82.8 |
| MS.gene07695.t1 | AT5G28530 | 33.750 | 160 | 102 | 3 | 154 | 310 | 61 | 219 | 2.43e-16 | 82.8 |
| MS.gene07695.t1 | AT1G10240 | 28.516 | 256 | 161 | 9 | 154 | 390 | 54 | 306 | 1.09e-15 | 80.9 |
| MS.gene07695.t1 | AT1G10240 | 28.516 | 256 | 161 | 9 | 154 | 390 | 54 | 306 | 1.09e-15 | 80.9 |
Find 118 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCACACCTGGTATCATTTC+TGG | 0.155992 | 4.1:+42878623 | None:intergenic |
| ACACAAATGGTTCACAATAT+TGG | 0.219824 | 4.1:-42877138 | MS.gene07695:CDS |
| CACAAATGGTTCACAATATT+GGG | 0.257023 | 4.1:-42877137 | MS.gene07695:CDS |
| TCCCTTAGCTTTGCTTGGTT+TGG | 0.257469 | 4.1:+42880050 | None:intergenic |
| TTGTTGATTCAGGGAGTAGA+AGG | 0.286138 | 4.1:-42879214 | MS.gene07695:intron |
| ATTTCAAATGTTCGTGTCTT+AGG | 0.296750 | 4.1:-42877291 | MS.gene07695:CDS |
| GGGAATGCTATAGTCATAAA+TGG | 0.304640 | 4.1:-42878894 | MS.gene07695:CDS |
| CTTTGCTTGGTTTGGATCTC+GGG | 0.316291 | 4.1:+42880058 | None:intergenic |
| TCACCGTTGTTGACTCCTTT+AGG | 0.330711 | 4.1:+42876791 | None:intergenic |
| GTATGTGCAACATACATTAA+AGG | 0.333195 | 4.1:+42878255 | None:intergenic |
| CCTGTGTAAAACTAGATTCT+TGG | 0.335728 | 4.1:+42877198 | None:intergenic |
| ATTGCACCATACGTTTGATA+TGG | 0.351243 | 4.1:+42878417 | None:intergenic |
| GCTTTGCTTGGTTTGGATCT+CGG | 0.353114 | 4.1:+42880057 | None:intergenic |
| CCAAGTTCTGAGGGACCGTT+TGG | 0.359223 | 4.1:-42878733 | MS.gene07695:CDS |
| AAGGGACTCTTTGTGTTGTT+AGG | 0.370328 | 4.1:-42880033 | MS.gene07695:intron |
| CAATATTAACATCGAGGAAA+TGG | 0.372866 | 4.1:-42879012 | MS.gene07695:CDS |
| CCAAACGGTCCCTCAGAACT+TGG | 0.376804 | 4.1:+42878733 | None:intergenic |
| TTCAGACGAAGGAGATAATA+TGG | 0.381516 | 4.1:-42878982 | MS.gene07695:CDS |
| CTTCCACCAGGCGTAGCAAT+TGG | 0.387040 | 4.1:+42876872 | None:intergenic |
| GTTTCAAAGTACTGTGGAAA+TGG | 0.394957 | 4.1:-42877352 | MS.gene07695:CDS |
| CCACACCTGGTATCATTTCT+GGG | 0.408982 | 4.1:+42878624 | None:intergenic |
| AGCGATTCATCCGAGTCTAA+TGG | 0.410491 | 4.1:-42878915 | MS.gene07695:CDS |
| AGTCGTCGACGAAAGTTTAC+TGG | 0.423532 | 4.1:-42876933 | MS.gene07695:CDS |
| TCATGGTATGCAAGGGTAAA+CGG | 0.428944 | 4.1:-42878774 | MS.gene07695:CDS |
| TATGTGCAACATACATTAAA+GGG | 0.429560 | 4.1:+42878256 | None:intergenic |
| AAGGATTTGTATAATCAATC+AGG | 0.433589 | 4.1:-42878351 | MS.gene07695:CDS |
| GAGATAATATGGATGACAAT+GGG | 0.436783 | 4.1:-42878971 | MS.gene07695:CDS |
| GGGATTCTCAAATTGCTTCA+AGG | 0.437802 | 4.1:-42877117 | MS.gene07695:CDS |
| CTGTGTAAAACTAGATTCTT+GGG | 0.438174 | 4.1:+42877199 | None:intergenic |
| CCTACTTGTGTGAGGACTAA+AGG | 0.444636 | 4.1:-42876908 | MS.gene07695:CDS |
| CTACTTGTGTGAGGACTAAA+GGG | 0.449197 | 4.1:-42876907 | MS.gene07695:CDS |
| GCGATTCATCCGAGTCTAAT+GGG | 0.449731 | 4.1:-42878914 | MS.gene07695:CDS |
| TGTCTTAGGATGGAGTCGTT+TGG | 0.452899 | 4.1:-42877277 | MS.gene07695:CDS |
| CACGAACATTTGAAATCTAC+AGG | 0.467229 | 4.1:+42877298 | None:intergenic |
| AAGAGTCCCTTAGCTTTGCT+TGG | 0.468067 | 4.1:+42880045 | None:intergenic |
| TGTAGTCAGTGTGGTGTGAT+AGG | 0.474905 | 4.1:-42876833 | MS.gene07695:CDS |
| TATTCAGTTGTCGAAGGATG+TGG | 0.485194 | 4.1:-42877083 | MS.gene07695:CDS |
| CCTTTAGTCCTCACACAAGT+AGG | 0.488782 | 4.1:+42876908 | None:intergenic |
| TTCTCGCTTCCGCCTCTCCA+AGG | 0.489867 | 4.1:+42878647 | None:intergenic |
| GGTGCAATGGCTAATTCATC+AGG | 0.491612 | 4.1:-42878402 | MS.gene07695:CDS |
| TCAATCTCAATCAAATCAGT+TGG | 0.493229 | 4.1:+42878465 | None:intergenic |
| TTGCATATAATTTCTACTCA+TGG | 0.494106 | 4.1:-42878791 | MS.gene07695:CDS |
| AGAGAACAGGGGATTGACCT+TGG | 0.494325 | 4.1:-42878664 | MS.gene07695:CDS |
| TGTTGATTCAGGGAGTAGAA+GGG | 0.494387 | 4.1:-42879213 | MS.gene07695:intron |
| GCTTCTGTTGTAGGTTATGG+AGG | 0.499576 | 4.1:-42879066 | MS.gene07695:intron |
| CTAAATTCATCAGATATGAA+TGG | 0.499723 | 4.1:-42879178 | MS.gene07695:CDS |
| TTGCTACGCCTGGTGGAAGT+AGG | 0.503186 | 4.1:-42876868 | MS.gene07695:CDS |
| ATCCAAACCAAGCAAAGCTA+AGG | 0.506402 | 4.1:-42880052 | MS.gene07695:CDS |
| CAAATTGCTTCAAGGTATGC+GGG | 0.516691 | 4.1:-42877109 | MS.gene07695:CDS |
| CTGTTGGATGGTTTGCTATG+TGG | 0.521362 | 4.1:-42878516 | MS.gene07695:CDS |
| CAAATGTTCGTGTCTTAGGA+TGG | 0.523067 | 4.1:-42877287 | MS.gene07695:CDS |
| AATAAACGATCATGTCCTAA+AGG | 0.523227 | 4.1:-42876806 | MS.gene07695:CDS |
| ATTAATGAAGATGATGAAGA+AGG | 0.525000 | 4.1:-42876734 | MS.gene07695:CDS |
| GTCGAAGGATGTGGCTGAGA+GGG | 0.529678 | 4.1:-42877074 | MS.gene07695:CDS |
| TAGACATTGTTTCAAAGCGT+TGG | 0.530743 | 4.1:-42878575 | MS.gene07695:CDS |
| ATTTCTACTCATGGTATGCA+AGG | 0.531446 | 4.1:-42878782 | MS.gene07695:CDS |
| CATAACCACGAGCTGTTGGA+TGG | 0.541920 | 4.1:-42878528 | MS.gene07695:CDS |
| CAAGTTCTGAGGGACCGTTT+GGG | 0.542763 | 4.1:-42878732 | MS.gene07695:CDS |
| TGCGCATAACCACGAGCTGT+TGG | 0.543217 | 4.1:-42878532 | MS.gene07695:CDS |
| GGTGTTAGCTTTCTATGTGC+CGG | 0.543539 | 4.1:+42878486 | None:intergenic |
| ACTAATCCAATTGCTACGCC+TGG | 0.544424 | 4.1:-42876878 | MS.gene07695:CDS |
| GTTGGTATTGATGCTAGCAC+TGG | 0.544748 | 4.1:-42876968 | MS.gene07695:CDS |
| AAGAATAAAACAACAACTGT+TGG | 0.546824 | 4.1:-42876986 | MS.gene07695:CDS |
| GTTATGCGCAAATTCAAATA+CGG | 0.547080 | 4.1:+42878545 | None:intergenic |
| GTGAACTGTCACATGGATGA+AGG | 0.551488 | 4.1:+42879539 | None:intergenic |
| ATTGAAAAGTATAAGAATGT+TGG | 0.559478 | 4.1:-42878447 | MS.gene07695:CDS |
| GCTGCAGAACATTACCCAAA+CGG | 0.563552 | 4.1:+42878718 | None:intergenic |
| CCGTGTATATATTGAAAATG+TGG | 0.564938 | 4.1:-42879517 | MS.gene07695:intron |
| TGAAATTCAAGAGATGTCCA+TGG | 0.566346 | 4.1:-42877389 | MS.gene07695:CDS |
| GTTCGAGCAAGATACACAAA+TGG | 0.566756 | 4.1:-42877151 | MS.gene07695:CDS |
| GGAGATAATATGGATGACAA+TGG | 0.571879 | 4.1:-42878972 | MS.gene07695:CDS |
| TCTGTTGTAGGTTATGGAGG+AGG | 0.573234 | 4.1:-42879063 | MS.gene07695:intron |
| TTCGGAAGACCCAAGTTCTG+AGG | 0.573488 | 4.1:-42878743 | MS.gene07695:CDS |
| TCAAATTGCTTCAAGGTATG+CGG | 0.574162 | 4.1:-42877110 | MS.gene07695:CDS |
| TTTCTGTAGATGTAGTTGAA+AGG | 0.575027 | 4.1:-42878836 | MS.gene07695:CDS |
| AATCCAATTGCTACGCCTGG+TGG | 0.577075 | 4.1:-42876875 | MS.gene07695:CDS |
| ATATCAAACGTATGGTGCAA+TGG | 0.580935 | 4.1:-42878415 | MS.gene07695:CDS |
| CTTTAGTCCTCACACAAGTA+GGG | 0.582163 | 4.1:+42876909 | None:intergenic |
| CCACACTGACTACATGATTG+AGG | 0.582317 | 4.1:+42876842 | None:intergenic |
| GAGAACCCAGAAATGATACC+AGG | 0.586155 | 4.1:-42878629 | MS.gene07695:CDS |
| GTAAGACCATATCAAACGTA+TGG | 0.586746 | 4.1:-42878423 | MS.gene07695:CDS |
| AACTTTGTAGATAGAACCCA+TGG | 0.589394 | 4.1:+42877372 | None:intergenic |
| GGGGATTGACCTTGGAGAGG+CGG | 0.591821 | 4.1:-42878656 | MS.gene07695:CDS |
| ATCAGATATGAATGGATGCA+TGG | 0.592737 | 4.1:-42879170 | MS.gene07695:CDS |
| GCTATAGTCATAAATGGCAT+CGG | 0.596967 | 4.1:-42878888 | MS.gene07695:CDS |
| GTAAAACTAGATTCTTGGGA+AGG | 0.598080 | 4.1:+42877203 | None:intergenic |
| GGGAATTATTCAGTTGTCGA+AGG | 0.603195 | 4.1:-42877089 | MS.gene07695:CDS |
| GAAATTCAAGAGATGTCCAT+GGG | 0.603913 | 4.1:-42877388 | MS.gene07695:CDS |
| GAATGGATGCATGGATGATG+AGG | 0.606403 | 4.1:-42879161 | MS.gene07695:CDS |
| TTGGTATTGATGCTAGCACT+GGG | 0.610032 | 4.1:-42876967 | MS.gene07695:CDS |
| TCGGAAGACCCAAGTTCTGA+GGG | 0.617413 | 4.1:-42878742 | MS.gene07695:CDS |
| TTAGTTTCATCTGACTCTTG+CGG | 0.617850 | 4.1:-42878315 | MS.gene07695:CDS |
| ACAGCAATAATATGATCGCA+AGG | 0.619104 | 4.1:+42877250 | None:intergenic |
| CAAACGGTCCCTCAGAACTT+GGG | 0.622569 | 4.1:+42878734 | None:intergenic |
| TCCAAACCAAGCAAAGCTAA+GGG | 0.624671 | 4.1:-42880051 | MS.gene07695:CDS |
| GCAATGGCTAATTCATCAGG+TGG | 0.625760 | 4.1:-42878399 | MS.gene07695:CDS |
| TACTGGACCCTACTTGTGTG+AGG | 0.626363 | 4.1:-42876916 | MS.gene07695:CDS |
| TTTCTACTCATGGTATGCAA+GGG | 0.627306 | 4.1:-42878781 | MS.gene07695:CDS |
| GCTTTGAAACAATGTCTATG+TGG | 0.628276 | 4.1:+42878580 | None:intergenic |
| ATGGACGAAGCTTCAGACGA+AGG | 0.631163 | 4.1:-42878993 | MS.gene07695:CDS |
| TACAAAGTTTCAAAGTACTG+TGG | 0.634037 | 4.1:-42877358 | MS.gene07695:CDS |
| ACTGTGGAAATGGAAGTGTC+TGG | 0.638067 | 4.1:-42877342 | MS.gene07695:CDS |
| TATAGCATTCCCATTAGACT+CGG | 0.641750 | 4.1:+42878905 | None:intergenic |
| AATGGGGCTAATGAGTGTGA+TGG | 0.645283 | 4.1:-42878954 | MS.gene07695:CDS |
| CCCAGAAATGATACCAGGTG+TGG | 0.648094 | 4.1:-42878624 | MS.gene07695:CDS |
| TGTCGAAGGATGTGGCTGAG+AGG | 0.652941 | 4.1:-42877075 | MS.gene07695:CDS |
| ATAATCAATCAGGAAGACAA+AGG | 0.657924 | 4.1:-42878341 | MS.gene07695:CDS |
| GCAAACCATCCAACAGCTCG+TGG | 0.662133 | 4.1:+42878523 | None:intergenic |
| ACAGGGGATTGACCTTGGAG+AGG | 0.670051 | 4.1:-42878659 | MS.gene07695:CDS |
| TGTGTGAGGACTAAAGGGTG+TGG | 0.670824 | 4.1:-42876902 | MS.gene07695:CDS |
| TGAGGACGCCTACTTCCACC+AGG | 0.673688 | 4.1:+42876860 | None:intergenic |
| AGATAATATGGATGACAATG+GGG | 0.688595 | 4.1:-42878970 | MS.gene07695:CDS |
| CCTCAATCATGTAGTCAGTG+TGG | 0.690892 | 4.1:-42876842 | MS.gene07695:CDS |
| ATACACGGTGAACTGTCACA+TGG | 0.692606 | 4.1:+42879532 | None:intergenic |
| CACTAAGAAAATCTACAATG+CGG | 0.712293 | 4.1:+42877026 | None:intergenic |
| TAATGACAATATTAACATCG+AGG | 0.732342 | 4.1:-42879018 | MS.gene07695:CDS |
| TGTCCTAAAGGAGTCAACAA+CGG | 0.735045 | 4.1:-42876794 | MS.gene07695:CDS |
| TGGTATTGATGCTAGCACTG+GGG | 0.762460 | 4.1:-42876966 | MS.gene07695:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACAGATTTTTTTTTTTTAAA+TGG | + | chr4.1:42877106-42877125 | None:intergenic | 10.0% |
| !!! | ATAAAAATAAAACTGAATTT+TGG | + | chr4.1:42876828-42876847 | None:intergenic | 10.0% |
| !! | AATAAATTGATGCTAATTAT+TGG | - | chr4.1:42877222-42877241 | MS.gene07695:CDS | 15.0% |
| !!! | TATCTCTTTTTAATTAATGT+GGG | + | chr4.1:42877368-42877387 | None:intergenic | 15.0% |
| !!! | TTATCTCTTTTTAATTAATG+TGG | + | chr4.1:42877369-42877388 | None:intergenic | 15.0% |
| !! | AAATGAATGAAAAAGGTTAA+TGG | + | chr4.1:42877419-42877438 | None:intergenic | 20.0% |
| !! | AATGAATGAAAAAGGTTAAT+GGG | + | chr4.1:42877418-42877437 | None:intergenic | 20.0% |
| !! | GTAAGTAAAAAGTGATTATT+AGG | - | chr4.1:42877693-42877712 | MS.gene07695:intron | 20.0% |
| !!! | ATTGAAAAGTATAAGAATGT+TGG | - | chr4.1:42878382-42878401 | MS.gene07695:CDS | 20.0% |
| !!! | ATTGTATTTGTTTTTCCTAT+AGG | + | chr4.1:42878698-42878717 | None:intergenic | 20.0% |
| !!! | CGTATGAATTATGAAATTTT+TGG | - | chr4.1:42878649-42878668 | MS.gene07695:CDS | 20.0% |
| !!! | TTTTGGAAATATACTCTTTA+TGG | + | chr4.1:42878902-42878921 | None:intergenic | 20.0% |
| !!! | TTTTTTAGAATCAATAAGCT+GGG | + | chr4.1:42877202-42877221 | None:intergenic | 20.0% |
| !!! | TTTTTTTAAATGGTGAGAAT+TGG | + | chr4.1:42877096-42877115 | None:intergenic | 20.0% |
| !!! | TTTTTTTAGAATCAATAAGC+TGG | + | chr4.1:42877203-42877222 | None:intergenic | 20.0% |
| ! | AAGAATAAAACAACAACTGT+TGG | - | chr4.1:42879843-42879862 | MS.gene07695:intron | 25.0% |
| ! | AAGGATTTGTATAATCAATC+AGG | - | chr4.1:42878478-42878497 | MS.gene07695:CDS | 25.0% |
| ! | ACCATTATATTTGACATTGA+TGG | - | chr4.1:42876939-42876958 | MS.gene07695:CDS | 25.0% |
| ! | AGTAGGAAAATGAATGAAAA+AGG | + | chr4.1:42877426-42877445 | None:intergenic | 25.0% |
| ! | ATATCTTAAAAGATGCATGT+TGG | - | chr4.1:42878996-42879015 | MS.gene07695:CDS | 25.0% |
| ! | ATTAATGAAGATGATGAAGA+AGG | - | chr4.1:42880095-42880114 | MS.gene07695:CDS | 25.0% |
| ! | CTAAATTCATCAGATATGAA+TGG | - | chr4.1:42877651-42877670 | MS.gene07695:intron | 25.0% |
| ! | GAATAAGTTTGAAGAACTAT+GGG | - | chr4.1:42879032-42879051 | MS.gene07695:CDS | 25.0% |
| ! | GTATGCAAAAAAAAGAATGT+GGG | - | chr4.1:42879107-42879126 | MS.gene07695:intron | 25.0% |
| ! | TAAAATTATGCTTCTGTTGT+AGG | - | chr4.1:42877754-42877773 | MS.gene07695:intron | 25.0% |
| ! | TAATGACAATATTAACATCG+AGG | - | chr4.1:42877811-42877830 | MS.gene07695:intron | 25.0% |
| ! | TAATGTTGAAAATGTGTCTA+AGG | + | chr4.1:42877510-42877529 | None:intergenic | 25.0% |
| ! | TATCTTAAAAGATGCATGTT+GGG | - | chr4.1:42878997-42879016 | MS.gene07695:CDS | 25.0% |
| ! | TATGTGCAACATACATTAAA+GGG | + | chr4.1:42878576-42878595 | None:intergenic | 25.0% |
| ! | TCATCTATAATATCATCAGT+AGG | + | chr4.1:42877443-42877462 | None:intergenic | 25.0% |
| ! | TGAATAAGTTTGAAGAACTA+TGG | - | chr4.1:42879031-42879050 | MS.gene07695:CDS | 25.0% |
| ! | TGTATGCAAAAAAAAGAATG+TGG | - | chr4.1:42879106-42879125 | MS.gene07695:intron | 25.0% |
| ! | TTGCATATAATTTCTACTCA+TGG | - | chr4.1:42878038-42878057 | MS.gene07695:intron | 25.0% |
| !! | CCACATTTTCAATATATACA+CGG | + | chr4.1:42877315-42877334 | None:intergenic | 25.0% |
| !!! | AAGATTTTTTCAGAGCATTA+CGG | + | chr4.1:42879404-42879423 | None:intergenic | 25.0% |
| !!! | ATCATATGTATTGTTGATTC+AGG | - | chr4.1:42877605-42877624 | MS.gene07695:intron | 25.0% |
| !!! | TCATATGTATTGTTGATTCA+GGG | - | chr4.1:42877606-42877625 | MS.gene07695:intron | 25.0% |
| !!! | TGAAATTTTTGGTGATGTAT+TGG | - | chr4.1:42878660-42878679 | MS.gene07695:CDS | 25.0% |
| AACAGAAGAATTCAGTTTGA+AGG | + | chr4.1:42876864-42876883 | None:intergenic | 30.0% | |
| AATAAACGATCATGTCCTAA+AGG | - | chr4.1:42880023-42880042 | MS.gene07695:intron | 30.0% | |
| ACACAAATGGTTCACAATAT+TGG | - | chr4.1:42879691-42879710 | MS.gene07695:intron | 30.0% | |
| AGATAATATGGATGACAATG+GGG | - | chr4.1:42877859-42877878 | MS.gene07695:intron | 30.0% | |
| ATAATCAATCAGGAAGACAA+AGG | - | chr4.1:42878488-42878507 | MS.gene07695:CDS | 30.0% | |
| ATACTGTAGACAAAGATAAG+AGG | - | chr4.1:42878593-42878612 | MS.gene07695:CDS | 30.0% | |
| ATTTCAAATGTTCGTGTCTT+AGG | - | chr4.1:42879538-42879557 | MS.gene07695:CDS | 30.0% | |
| CAATATTAACATCGAGGAAA+TGG | - | chr4.1:42877817-42877836 | MS.gene07695:intron | 30.0% | |
| CACAAATGGTTCACAATATT+GGG | - | chr4.1:42879692-42879711 | MS.gene07695:intron | 30.0% | |
| CACTAAGAAAATCTACAATG+CGG | + | chr4.1:42879806-42879825 | None:intergenic | 30.0% | |
| CCGTGTATATATTGAAAATG+TGG | - | chr4.1:42877312-42877331 | MS.gene07695:CDS | 30.0% | |
| CCTTTATCTGTAATAACTGA+CGG | - | chr4.1:42878856-42878875 | MS.gene07695:CDS | 30.0% | |
| CTCGAAATCGAAAATATGTA+AGG | + | chr4.1:42879269-42879288 | None:intergenic | 30.0% | |
| CTGTGTAAAACTAGATTCTT+GGG | + | chr4.1:42879633-42879652 | None:intergenic | 30.0% | |
| GAAGAGATGGTTGAAAAATT+TGG | - | chr4.1:42879054-42879073 | MS.gene07695:CDS | 30.0% | |
| GAGATAATATGGATGACAAT+GGG | - | chr4.1:42877858-42877877 | MS.gene07695:intron | 30.0% | |
| GCCATCAATGTCAAATATAA+TGG | + | chr4.1:42876943-42876962 | None:intergenic | 30.0% | |
| GTATGTGCAACATACATTAA+AGG | + | chr4.1:42878577-42878596 | None:intergenic | 30.0% | |
| GTTATGCGCAAATTCAAATA+CGG | + | chr4.1:42878287-42878306 | None:intergenic | 30.0% | |
| TCAATCTCAATCAAATCAGT+TGG | + | chr4.1:42878367-42878386 | None:intergenic | 30.0% | |
| TTGGTTATGATGATTAACAC+CGG | + | chr4.1:42878740-42878759 | None:intergenic | 30.0% | |
| TTTCTGTAGATGTAGTTGAA+AGG | - | chr4.1:42877993-42878012 | MS.gene07695:intron | 30.0% | |
| ! | ATTTTGTCCAGCAATTTCAT+AGG | - | chr4.1:42879241-42879260 | MS.gene07695:intron | 30.0% |
| ! | CATAATCTATGATGTGCTTT+TGG | + | chr4.1:42878919-42878938 | None:intergenic | 30.0% |
| !! | AGCAAACTTTTGTTTGTTCA+CGG | - | chr4.1:42878131-42878150 | MS.gene07695:intron | 30.0% |
| !! | CAAGTTAGGTTTTGTGAAAA+AGG | - | chr4.1:42878459-42878478 | MS.gene07695:CDS | 30.0% |
| !! | CATCGGTGATATTTTAAAGA+TGG | - | chr4.1:42877958-42877977 | MS.gene07695:intron | 30.0% |
| !! | TACAAAGTTTCAAAGTACTG+TGG | - | chr4.1:42879471-42879490 | MS.gene07695:intron | 30.0% |
| !!! | ATCAAAGGAGAATTTTTTGC+AGG | - | chr4.1:42879141-42879160 | MS.gene07695:intron | 30.0% |
| !!! | TATTGCTGTTTTGATGTATC+TGG | - | chr4.1:42879593-42879612 | MS.gene07695:intron | 30.0% |
| AACTTTGTAGATAGAACCCA+TGG | + | chr4.1:42879460-42879479 | None:intergenic | 35.0% | |
| ACACCGGAGAAAATAACAAA+CGG | + | chr4.1:42878724-42878743 | None:intergenic | 35.0% | |
| ACAGCAATAATATGATCGCA+AGG | + | chr4.1:42879582-42879601 | None:intergenic | 35.0% | |
| ACCATAGTTGGAATGATAGT+CGG | + | chr4.1:42879301-42879320 | None:intergenic | 35.0% | |
| AGAAAATCTCCCTTGTAAAC+TGG | + | chr4.1:42879374-42879393 | None:intergenic | 35.0% | |
| AGAGACATATGTTTGGTTGT+TGG | - | chr4.1:42878801-42878820 | MS.gene07695:CDS | 35.0% | |
| ATATCAAACGTATGGTGCAA+TGG | - | chr4.1:42878414-42878433 | MS.gene07695:CDS | 35.0% | |
| ATCAGATATGAATGGATGCA+TGG | - | chr4.1:42877659-42877678 | MS.gene07695:intron | 35.0% | |
| ATTGCACCATACGTTTGATA+TGG | + | chr4.1:42878415-42878434 | None:intergenic | 35.0% | |
| ATTTCTACTCATGGTATGCA+AGG | - | chr4.1:42878047-42878066 | MS.gene07695:intron | 35.0% | |
| CACATCATAGATTATGTGCT+TGG | - | chr4.1:42878923-42878942 | MS.gene07695:CDS | 35.0% | |
| CCGTCAGTTATTACAGATAA+AGG | + | chr4.1:42878859-42878878 | None:intergenic | 35.0% | |
| CCTGTGTAAAACTAGATTCT+TGG | + | chr4.1:42879634-42879653 | None:intergenic | 35.0% | |
| GAAATTCAAGAGATGTCCAT+GGG | - | chr4.1:42879441-42879460 | MS.gene07695:intron | 35.0% | |
| GCTATAGTCATAAATGGCAT+CGG | - | chr4.1:42877941-42877960 | MS.gene07695:intron | 35.0% | |
| GGAGATAATATGGATGACAA+TGG | - | chr4.1:42877857-42877876 | MS.gene07695:intron | 35.0% | |
| GGGAATGCTATAGTCATAAA+TGG | - | chr4.1:42877935-42877954 | MS.gene07695:intron | 35.0% | |
| GTAAAACTAGATTCTTGGGA+AGG | + | chr4.1:42879629-42879648 | None:intergenic | 35.0% | |
| GTAAGACCATATCAAACGTA+TGG | - | chr4.1:42878406-42878425 | MS.gene07695:CDS | 35.0% | |
| TAGACATTGTTTCAAAGCGT+TGG | - | chr4.1:42878254-42878273 | MS.gene07695:intron | 35.0% | |
| TATAGCATTCCCATTAGACT+CGG | + | chr4.1:42877927-42877946 | None:intergenic | 35.0% | |
| TATGCTTCTGTTGTAGGTTA+TGG | - | chr4.1:42877760-42877779 | MS.gene07695:intron | 35.0% | |
| TCAAATTGCTTCAAGGTATG+CGG | - | chr4.1:42879719-42879738 | MS.gene07695:intron | 35.0% | |
| TGAAATTCAAGAGATGTCCA+TGG | - | chr4.1:42879440-42879459 | MS.gene07695:intron | 35.0% | |
| TTAGTTTCATCTGACTCTTG+CGG | - | chr4.1:42878514-42878533 | MS.gene07695:CDS | 35.0% | |
| TTCAGACGAAGGAGATAATA+TGG | - | chr4.1:42877847-42877866 | MS.gene07695:intron | 35.0% | |
| TTTCCTATAGGTTGCATCAA+AGG | + | chr4.1:42878686-42878705 | None:intergenic | 35.0% | |
| TTTCTACTCATGGTATGCAA+GGG | - | chr4.1:42878048-42878067 | MS.gene07695:intron | 35.0% | |
| ! | CACGAACATTTGAAATCTAC+AGG | + | chr4.1:42879534-42879553 | None:intergenic | 35.0% |
| ! | TCGCAAACTAGTTTGCAATA+CGG | + | chr4.1:42879328-42879347 | None:intergenic | 35.0% |
| !! | GCAAACTTTTGTTTGTTCAC+GGG | - | chr4.1:42878132-42878151 | MS.gene07695:intron | 35.0% |
| !! | GCTTTGAAACAATGTCTATG+TGG | + | chr4.1:42878252-42878271 | None:intergenic | 35.0% |
| !! | GTTTCAAAGTACTGTGGAAA+TGG | - | chr4.1:42879477-42879496 | MS.gene07695:intron | 35.0% |
| !! | TTCTTAGTGCTGAACTTTTG+AGG | - | chr4.1:42879817-42879836 | MS.gene07695:intron | 35.0% |
| !! | TTTGCTATGTGGTCTTTTAC+CGG | - | chr4.1:42878324-42878343 | MS.gene07695:CDS | 35.0% |
| !! | TTTTCAGAGCATTACGGAAA+AGG | + | chr4.1:42879398-42879417 | None:intergenic | 35.0% |
| !!! | AGAATCTAGTTTTACACAGG+TGG | - | chr4.1:42879634-42879653 | MS.gene07695:intron | 35.0% |
| !!! | AGGTATTTACTTTTGAAGCG+AGG | - | chr4.1:42877713-42877732 | MS.gene07695:intron | 35.0% |
| !!! | CCAAGAATCTAGTTTTACAC+AGG | - | chr4.1:42879631-42879650 | MS.gene07695:intron | 35.0% |
| AAGATGCATGTTGGGTGATA+TGG | - | chr4.1:42879005-42879024 | MS.gene07695:CDS | 40.0% | |
| AGACGGAAGAGACATATGTT+TGG | - | chr4.1:42878794-42878813 | MS.gene07695:CDS | 40.0% | |
| AGGTTTAGTTACGAGAGAGA+CGG | - | chr4.1:42878777-42878796 | MS.gene07695:CDS | 40.0% | |
| ATCCAAACCAAGCAAAGCTA+AGG | - | chr4.1:42876777-42876796 | MS.gene07695:CDS | 40.0% | |
| CAAATGTTCGTGTCTTAGGA+TGG | - | chr4.1:42879542-42879561 | MS.gene07695:CDS | 40.0% | |
| CAAATTGCTTCAAGGTATGC+GGG | - | chr4.1:42879720-42879739 | MS.gene07695:intron | 40.0% | |
| CACCGGAGAAAATAACAAAC+GGG | + | chr4.1:42878723-42878742 | None:intergenic | 40.0% | |
| CTACTTGTGTGAGGACTAAA+GGG | - | chr4.1:42879922-42879941 | MS.gene07695:intron | 40.0% | |
| CTTTAGTCCTCACACAAGTA+GGG | + | chr4.1:42879923-42879942 | None:intergenic | 40.0% | |
| GAGGGTTTACATAGTCACAT+AGG | - | chr4.1:42879186-42879205 | MS.gene07695:CDS | 40.0% | |
| GGAATGCATCATCGAATGTT+GGG | - | chr4.1:42878956-42878975 | MS.gene07695:CDS | 40.0% | |
| GGGAATTATTCAGTTGTCGA+AGG | - | chr4.1:42879740-42879759 | MS.gene07695:intron | 40.0% | |
| GGGATTCTCAAATTGCTTCA+AGG | - | chr4.1:42879712-42879731 | MS.gene07695:intron | 40.0% | |
| GTGTCTAAGGAGATCAAACT+AGG | + | chr4.1:42877497-42877516 | None:intergenic | 40.0% | |
| GTTCGAGCAAGATACACAAA+TGG | - | chr4.1:42879678-42879697 | MS.gene07695:intron | 40.0% | |
| TATGTGCTTGGCATCTTCTA+CGG | - | chr4.1:42878935-42878954 | MS.gene07695:CDS | 40.0% | |
| TATTCAGTTGTCGAAGGATG+TGG | - | chr4.1:42879746-42879765 | MS.gene07695:intron | 40.0% | |
| TCATGGTATGCAAGGGTAAA+CGG | - | chr4.1:42878055-42878074 | MS.gene07695:intron | 40.0% | |
| TCCAAACCAAGCAAAGCTAA+GGG | - | chr4.1:42876778-42876797 | MS.gene07695:CDS | 40.0% | |
| TCCGACTATCATTCCAACTA+TGG | - | chr4.1:42879297-42879316 | MS.gene07695:intron | 40.0% | |
| TGAAGAACTATGGGAAGAGA+TGG | - | chr4.1:42879041-42879060 | MS.gene07695:CDS | 40.0% | |
| TGATCCAATTGTTGTCTTGC+AGG | + | chr4.1:42879080-42879099 | None:intergenic | 40.0% | |
| TGTCCTAAAGGAGTCAACAA+CGG | - | chr4.1:42880035-42880054 | MS.gene07695:CDS | 40.0% | |
| ! | AAGGGACTCTTTGTGTTGTT+AGG | - | chr4.1:42876796-42876815 | MS.gene07695:CDS | 40.0% |
| ! | AGCATCGAACCAGTTTACAA+GGG | - | chr4.1:42879362-42879381 | MS.gene07695:intron | 40.0% |
| ! | ATAAGCACCGCATACACATA+TGG | + | chr4.1:42876965-42876984 | None:intergenic | 40.0% |
| ! | CGCAAACTAGTTTGCAATAC+GGG | + | chr4.1:42879327-42879346 | None:intergenic | 40.0% |
| ! | TAAGGCACCTATGAAATTGC+TGG | + | chr4.1:42879251-42879270 | None:intergenic | 40.0% |
| ! | TCAGGTGGTTTTCACAAGTT+AGG | - | chr4.1:42878445-42878464 | MS.gene07695:CDS | 40.0% |
| ! | TTGATGGCCATATGTGTATG+CGG | - | chr4.1:42876955-42876974 | MS.gene07695:CDS | 40.0% |
| !! | ACTTTTGTTTGTTCACGGGA+AGG | - | chr4.1:42878136-42878155 | MS.gene07695:intron | 40.0% |
| !! | GGGTAAACGGATTTTCTGTT+CGG | - | chr4.1:42878068-42878087 | MS.gene07695:intron | 40.0% |
| !! | TGTTGATTCAGGGAGTAGAA+GGG | - | chr4.1:42877616-42877635 | MS.gene07695:intron | 40.0% |
| !! | TTGGTATTGATGCTAGCACT+GGG | - | chr4.1:42879862-42879881 | MS.gene07695:intron | 40.0% |
| !! | TTGTTGATTCAGGGAGTAGA+AGG | - | chr4.1:42877615-42877634 | MS.gene07695:intron | 40.0% |
| !!! | AGAGGCTTGAACGTCTTTTT+TGG | - | chr4.1:42878611-42878630 | MS.gene07695:CDS | 40.0% |
| !!! | GAACGTCTTTTTTGGTGTGA+TGG | - | chr4.1:42878619-42878638 | MS.gene07695:CDS | 40.0% |
| !!! | GAAGGTTTTAGAGAGAACAG+GGG | - | chr4.1:42878154-42878173 | MS.gene07695:intron | 40.0% |
| !!! | GGAAGGTTTTAGAGAGAACA+GGG | - | chr4.1:42878153-42878172 | MS.gene07695:intron | 40.0% |
| !!! | TGCCCGTTTGTTATTTTCTC+CGG | - | chr4.1:42878718-42878737 | MS.gene07695:CDS | 40.0% |
| AATGGGGCTAATGAGTGTGA+TGG | - | chr4.1:42877875-42877894 | MS.gene07695:intron | 45.0% | |
| ACTAATCCAATTGCTACGCC+TGG | - | chr4.1:42879951-42879970 | MS.gene07695:intron | 45.0% | |
| AGCGATTCATCCGAGTCTAA+TGG | - | chr4.1:42877914-42877933 | MS.gene07695:intron | 45.0% | |
| AGTCGTCGACGAAAGTTTAC+TGG | - | chr4.1:42879896-42879915 | MS.gene07695:intron | 45.0% | |
| ATACACGGTGAACTGTCACA+TGG | + | chr4.1:42877300-42877319 | None:intergenic | 45.0% | |
| ATGCATGTTGGGTGATATGG+AGG | - | chr4.1:42879008-42879027 | MS.gene07695:CDS | 45.0% | |
| CAAACTGTTGTCTTTGCGAC+AGG | - | chr4.1:42878757-42878776 | MS.gene07695:CDS | 45.0% | |
| CAATTCGCGACTGCTATGAA+TGG | - | chr4.1:42878826-42878845 | MS.gene07695:CDS | 45.0% | |
| CATTCATAGCAGTCGCGAAT+TGG | + | chr4.1:42878828-42878847 | None:intergenic | 45.0% | |
| CATTGAGGCAGTTGCAAATC+AGG | + | chr4.1:42877466-42877485 | None:intergenic | 45.0% | |
| CCACACCTGGTATCATTTCT+GGG | + | chr4.1:42878208-42878227 | None:intergenic | 45.0% | |
| CCTACTTGTGTGAGGACTAA+AGG | - | chr4.1:42879921-42879940 | MS.gene07695:intron | 45.0% | |
| CCTCAATCATGTAGTCAGTG+TGG | - | chr4.1:42879987-42880006 | MS.gene07695:intron | 45.0% | |
| CCTTTAGTCCTCACACAAGT+AGG | + | chr4.1:42879924-42879943 | None:intergenic | 45.0% | |
| CGGAATGCATCATCGAATGT+TGG | - | chr4.1:42878955-42878974 | MS.gene07695:CDS | 45.0% | |
| CTGTCGCAAAGACAACAGTT+TGG | + | chr4.1:42878759-42878778 | None:intergenic | 45.0% | |
| GAATGGATGCATGGATGATG+AGG | - | chr4.1:42877668-42877687 | MS.gene07695:intron | 45.0% | |
| GAGAACCCAGAAATGATACC+AGG | - | chr4.1:42878200-42878219 | MS.gene07695:intron | 45.0% | |
| GCAATGGCTAATTCATCAGG+TGG | - | chr4.1:42878430-42878449 | MS.gene07695:CDS | 45.0% | |
| GCGATTCATCCGAGTCTAAT+GGG | - | chr4.1:42877915-42877934 | MS.gene07695:intron | 45.0% | |
| GCTGCAGAACATTACCCAAA+CGG | + | chr4.1:42878114-42878133 | None:intergenic | 45.0% | |
| GCTTCTGTTGTAGGTTATGG+AGG | - | chr4.1:42877763-42877782 | MS.gene07695:intron | 45.0% | |
| GGTGCAATGGCTAATTCATC+AGG | - | chr4.1:42878427-42878446 | MS.gene07695:CDS | 45.0% | |
| GTGAACTGTCACATGGATGA+AGG | + | chr4.1:42877293-42877312 | None:intergenic | 45.0% | |
| TCCACACCTGGTATCATTTC+TGG | + | chr4.1:42878209-42878228 | None:intergenic | 45.0% | |
| TCTGTTGTAGGTTATGGAGG+AGG | - | chr4.1:42877766-42877785 | MS.gene07695:intron | 45.0% | |
| TGGCCTTTGATGCAACCTAT+AGG | - | chr4.1:42878680-42878699 | MS.gene07695:CDS | 45.0% | |
| TGTAGTCAGTGTGGTGTGAT+AGG | - | chr4.1:42879996-42880015 | MS.gene07695:intron | 45.0% | |
| TGTCTTAGGATGGAGTCGTT+TGG | - | chr4.1:42879552-42879571 | MS.gene07695:intron | 45.0% | |
| TTGCAACTGCCTCAATGTTG+TGG | - | chr4.1:42877469-42877488 | MS.gene07695:intron | 45.0% | |
| TTGGCCTGCAAGACAACAAT+TGG | - | chr4.1:42879073-42879092 | MS.gene07695:intron | 45.0% | |
| ! | AACTAGGTGCCACAACATTG+AGG | + | chr4.1:42877481-42877500 | None:intergenic | 45.0% |
| ! | CAATACGGGTTGACCATAGT+TGG | + | chr4.1:42879313-42879332 | None:intergenic | 45.0% |
| ! | CAGCATCGAACCAGTTTACA+AGG | - | chr4.1:42879361-42879380 | MS.gene07695:intron | 45.0% |
| ! | CCACACTGACTACATGATTG+AGG | + | chr4.1:42879990-42880009 | None:intergenic | 45.0% |
| ! | TTTTGCAGAACATCCACACC+TGG | + | chr4.1:42878221-42878240 | None:intergenic | 45.0% |
| !! | AAGAGTCCCTTAGCTTTGCT+TGG | + | chr4.1:42876787-42876806 | None:intergenic | 45.0% |
| !! | ACTGTGGAAATGGAAGTGTC+TGG | - | chr4.1:42879487-42879506 | MS.gene07695:intron | 45.0% |
| !! | CTGTTGGATGGTTTGCTATG+TGG | - | chr4.1:42878313-42878332 | MS.gene07695:CDS | 45.0% |
| !! | CTTTGCTTGGTTTGGATCTC+GGG | + | chr4.1:42876774-42876793 | None:intergenic | 45.0% |
| !! | GCTTTGCTTGGTTTGGATCT+CGG | + | chr4.1:42876775-42876794 | None:intergenic | 45.0% |
| !! | GGTGTTAGCTTTCTATGTGC+CGG | + | chr4.1:42878346-42878365 | None:intergenic | 45.0% |
| !! | GTTGGTATTGATGCTAGCAC+TGG | - | chr4.1:42879861-42879880 | MS.gene07695:intron | 45.0% |
| !! | TCACCGTTGTTGACTCCTTT+AGG | + | chr4.1:42880041-42880060 | None:intergenic | 45.0% |
| !! | TCCCTTAGCTTTGCTTGGTT+TGG | + | chr4.1:42876782-42876801 | None:intergenic | 45.0% |
| !! | TGGTATTGATGCTAGCACTG+GGG | - | chr4.1:42879863-42879882 | MS.gene07695:intron | 45.0% |
| !!! | GGGAAGGTTTTAGAGAGAAC+AGG | - | chr4.1:42878152-42878171 | MS.gene07695:intron | 45.0% |
| AATCCAATTGCTACGCCTGG+TGG | - | chr4.1:42879954-42879973 | MS.gene07695:intron | 50.0% | |
| AGAGAACAGGGGATTGACCT+TGG | - | chr4.1:42878165-42878184 | MS.gene07695:intron | 50.0% | |
| ATGGACGAAGCTTCAGACGA+AGG | - | chr4.1:42877836-42877855 | MS.gene07695:intron | 50.0% | |
| CAAACGGTCCCTCAGAACTT+GGG | + | chr4.1:42878098-42878117 | None:intergenic | 50.0% | |
| CAGGTATACGAACCACGTCT+CGG | - | chr4.1:42879160-42879179 | MS.gene07695:CDS | 50.0% | |
| CATAACCACGAGCTGTTGGA+TGG | - | chr4.1:42878301-42878320 | MS.gene07695:CDS | 50.0% | |
| CCCAGAAATGATACCAGGTG+TGG | - | chr4.1:42878205-42878224 | MS.gene07695:intron | 50.0% | |
| CGCGACTGCTATGAATGGTA+AGG | - | chr4.1:42878831-42878850 | MS.gene07695:CDS | 50.0% | |
| TACTGGACCCTACTTGTGTG+AGG | - | chr4.1:42879913-42879932 | MS.gene07695:intron | 50.0% | |
| TGGGCGACTGCTCATATCAA+AGG | - | chr4.1:42879126-42879145 | MS.gene07695:intron | 50.0% | |
| TGTGTGAGGACTAAAGGGTG+TGG | - | chr4.1:42879927-42879946 | MS.gene07695:intron | 50.0% | |
| TTCGGAAGACCCAAGTTCTG+AGG | - | chr4.1:42878086-42878105 | MS.gene07695:intron | 50.0% | |
| ! | TCGGAAGACCCAAGTTCTGA+GGG | - | chr4.1:42878087-42878106 | MS.gene07695:intron | 50.0% |
| !! | CAAGTTCTGAGGGACCGTTT+GGG | - | chr4.1:42878097-42878116 | MS.gene07695:intron | 50.0% |
| ACAGGGGATTGACCTTGGAG+AGG | - | chr4.1:42878170-42878189 | MS.gene07695:intron | 55.0% | |
| CCAAACGGTCCCTCAGAACT+TGG | + | chr4.1:42878099-42878118 | None:intergenic | 55.0% | |
| CTTCCACCAGGCGTAGCAAT+TGG | + | chr4.1:42879960-42879979 | None:intergenic | 55.0% | |
| GCAAACCATCCAACAGCTCG+TGG | + | chr4.1:42878309-42878328 | None:intergenic | 55.0% | |
| GTCGAAGGATGTGGCTGAGA+GGG | - | chr4.1:42879755-42879774 | MS.gene07695:intron | 55.0% | |
| TAAACCCTCACACCGAGACG+TGG | + | chr4.1:42879175-42879194 | None:intergenic | 55.0% | |
| TGCGCATAACCACGAGCTGT+TGG | - | chr4.1:42878297-42878316 | MS.gene07695:CDS | 55.0% | |
| TGTCGAAGGATGTGGCTGAG+AGG | - | chr4.1:42879754-42879773 | MS.gene07695:intron | 55.0% | |
| TTGCTACGCCTGGTGGAAGT+AGG | - | chr4.1:42879961-42879980 | MS.gene07695:intron | 55.0% | |
| !! | CCAAGTTCTGAGGGACCGTT+TGG | - | chr4.1:42878096-42878115 | MS.gene07695:intron | 55.0% |
| GGGGATTGACCTTGGAGAGG+CGG | - | chr4.1:42878173-42878192 | MS.gene07695:intron | 60.0% | |
| TGAGGACGCCTACTTCCACC+AGG | + | chr4.1:42879972-42879991 | None:intergenic | 60.0% | |
| TTCTCGCTTCCGCCTCTCCA+AGG | + | chr4.1:42878185-42878204 | None:intergenic | 60.0% | |
| ! | ACGAACCACGTCTCGGTGTG+AGG | - | chr4.1:42879167-42879186 | MS.gene07695:CDS | 60.0% |
| ! | CGAACCACGTCTCGGTGTGA+GGG | - | chr4.1:42879168-42879187 | MS.gene07695:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 42876718 | 42880133 | 42876718 | ID=MS.gene07695 |
| chr4.1 | mRNA | 42876718 | 42880133 | 42876718 | ID=MS.gene07695.t1;Parent=MS.gene07695 |
| chr4.1 | exon | 42880034 | 42880133 | 42880034 | ID=MS.gene07695.t1.exon1;Parent=MS.gene07695.t1 |
| chr4.1 | CDS | 42880034 | 42880133 | 42880034 | ID=cds.MS.gene07695.t1;Parent=MS.gene07695.t1 |
| chr4.1 | exon | 42879518 | 42879564 | 42879518 | ID=MS.gene07695.t1.exon2;Parent=MS.gene07695.t1 |
| chr4.1 | CDS | 42879518 | 42879564 | 42879518 | ID=cds.MS.gene07695.t1;Parent=MS.gene07695.t1 |
| chr4.1 | exon | 42879159 | 42879224 | 42879159 | ID=MS.gene07695.t1.exon3;Parent=MS.gene07695.t1 |
| chr4.1 | CDS | 42879159 | 42879224 | 42879159 | ID=cds.MS.gene07695.t1;Parent=MS.gene07695.t1 |
| chr4.1 | exon | 42878270 | 42879075 | 42878270 | ID=MS.gene07695.t1.exon4;Parent=MS.gene07695.t1 |
| chr4.1 | CDS | 42878270 | 42879075 | 42878270 | ID=cds.MS.gene07695.t1;Parent=MS.gene07695.t1 |
| chr4.1 | exon | 42876718 | 42877417 | 42876718 | ID=MS.gene07695.t1.exon5;Parent=MS.gene07695.t1 |
| chr4.1 | CDS | 42876718 | 42877417 | 42876718 | ID=cds.MS.gene07695.t1;Parent=MS.gene07695.t1 |
| Gene Sequence |
| Protein sequence |
