Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07865.t1 | XP_013444421.1 | 99.6 | 256 | 1 | 0 | 1 | 256 | 1 | 256 | 4.50E-118 | 434.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07865.t1 | O81488 | 85.9 | 255 | 35 | 1 | 1 | 255 | 1 | 254 | 4.0e-99 | 362.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07865.t1 | A0FK62 | 99.6 | 256 | 1 | 0 | 1 | 256 | 1 | 256 | 3.2e-118 | 434.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene07865.t1 | TF | Alfin-like |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07865.t1 | MTR_8g019520 | 99.609 | 256 | 1 | 0 | 1 | 256 | 1 | 256 | 0.0 | 532 |
| MS.gene07865.t1 | MTR_8g019520 | 99.222 | 257 | 1 | 1 | 1 | 256 | 1 | 257 | 0.0 | 528 |
| MS.gene07865.t1 | MTR_2g099500 | 80.081 | 246 | 48 | 1 | 10 | 255 | 6 | 250 | 9.57e-123 | 350 |
| MS.gene07865.t1 | MTR_2g040990 | 72.441 | 254 | 60 | 3 | 5 | 256 | 8 | 253 | 1.71e-121 | 347 |
| MS.gene07865.t1 | MTR_1g015185 | 74.903 | 259 | 53 | 3 | 7 | 256 | 8 | 263 | 3.89e-121 | 346 |
| MS.gene07865.t1 | MTR_4g134510 | 73.361 | 244 | 64 | 1 | 9 | 252 | 10 | 252 | 1.54e-117 | 337 |
| MS.gene07865.t1 | MTR_4g015830 | 63.052 | 249 | 78 | 7 | 8 | 256 | 6 | 240 | 1.22e-93 | 275 |
| MS.gene07865.t1 | MTR_7g068590 | 60.643 | 249 | 86 | 7 | 8 | 256 | 6 | 242 | 2.73e-90 | 267 |
| MS.gene07865.t1 | MTR_1g015185 | 88.112 | 143 | 17 | 0 | 7 | 149 | 8 | 150 | 1.12e-82 | 246 |
| MS.gene07865.t1 | MTR_8g066480 | 55.797 | 138 | 40 | 6 | 120 | 256 | 29 | 146 | 1.95e-28 | 106 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07865.t1 | AT5G20510 | 71.373 | 255 | 68 | 2 | 6 | 256 | 7 | 260 | 1.52e-122 | 349 |
| MS.gene07865.t1 | AT3G42790 | 73.896 | 249 | 58 | 4 | 7 | 255 | 8 | 249 | 1.97e-121 | 346 |
| MS.gene07865.t1 | AT2G02470 | 68.340 | 259 | 76 | 4 | 1 | 256 | 1 | 256 | 1.13e-108 | 314 |
| MS.gene07865.t1 | AT2G02470 | 68.359 | 256 | 72 | 4 | 1 | 256 | 1 | 247 | 2.73e-108 | 313 |
| MS.gene07865.t1 | AT1G14510 | 68.421 | 247 | 74 | 3 | 9 | 255 | 9 | 251 | 8.31e-108 | 312 |
| MS.gene07865.t1 | AT5G26210 | 71.483 | 263 | 58 | 3 | 1 | 255 | 1 | 254 | 1.18e-103 | 301 |
| MS.gene07865.t1 | AT5G05610 | 63.673 | 245 | 76 | 5 | 8 | 252 | 7 | 238 | 2.64e-97 | 285 |
| MS.gene07865.t1 | AT5G05610 | 63.673 | 245 | 76 | 5 | 8 | 252 | 7 | 238 | 2.64e-97 | 285 |
| MS.gene07865.t1 | AT5G20510 | 69.585 | 217 | 61 | 2 | 44 | 256 | 4 | 219 | 4.04e-96 | 281 |
| MS.gene07865.t1 | AT3G11200 | 63.200 | 250 | 82 | 5 | 3 | 252 | 4 | 243 | 1.55e-93 | 275 |
| MS.gene07865.t1 | AT5G20510 | 74.843 | 159 | 40 | 0 | 6 | 164 | 7 | 165 | 1.12e-81 | 243 |
| MS.gene07865.t1 | AT3G11200 | 62.212 | 217 | 72 | 5 | 36 | 252 | 24 | 230 | 1.25e-77 | 234 |
| MS.gene07865.t1 | AT2G02470 | 74.051 | 158 | 40 | 1 | 1 | 158 | 1 | 157 | 4.97e-71 | 218 |
Find 0 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAGAACAAAAAAAA+TGG | + | 57448:457-476 | None:intergenic | 10.0% |
| !! | ATTTAAATATTTCAAATCAT+AGG | + | 57448:3133-3152 | None:intergenic | 10.0% |
| !!! | AAATTTTCAAATTCATTTTT+TGG | - | 57448:484-503 | MS.gene07865:CDS | 10.0% |
| !!! | ATATTTAATTTTCAAATTCA+TGG | - | 57448:3570-3589 | MS.gene07865:intron | 10.0% |
| !!! | ATTTTTCAATTTTACTTAAT+GGG | - | 57448:761-780 | MS.gene07865:intron | 10.0% |
| !!! | TATTTTTCAATTTTACTTAA+TGG | - | 57448:760-779 | MS.gene07865:intron | 10.0% |
| !! | ATACTTGTTTATGAATATTA+GGG | + | 57448:2058-2077 | None:intergenic | 15.0% |
| !!! | ACAAAAAAAATGGTTTTTTA+AGG | + | 57448:447-466 | None:intergenic | 15.0% |
| !!! | ATTGTTGTTTATAATATTAG+CGG | - | 57448:628-647 | MS.gene07865:intron | 15.0% |
| !!! | TATTGATTTTTGTGAAAAAA+TGG | - | 57448:2143-2162 | MS.gene07865:intron | 15.0% |
| !!! | TTATATATTTTTTTTACCAC+CGG | - | 57448:1016-1035 | MS.gene07865:intron | 15.0% |
| !! | AAGTTCAAAAAAAAATTGCA+AGG | + | 57448:901-920 | None:intergenic | 20.0% |
| !! | ATGAAAAATATTGTTTGCAA+TGG | - | 57448:3403-3422 | MS.gene07865:intron | 20.0% |
| !! | GATACTTGTTTATGAATATT+AGG | + | 57448:2059-2078 | None:intergenic | 20.0% |
| !! | TGAATTGTGTAATAATTCAT+GGG | - | 57448:1236-1255 | MS.gene07865:intron | 20.0% |
| !! | TTATGCAAATATCTAGAAAA+TGG | - | 57448:3155-3174 | MS.gene07865:intron | 20.0% |
| !! | TTGAATATATATACTGAAGA+AGG | + | 57448:2202-2221 | None:intergenic | 20.0% |
| !! | TTGAATTGTGTAATAATTCA+TGG | - | 57448:1235-1254 | MS.gene07865:intron | 20.0% |
| !! | TTTAAATTGAGTATTTGAGA+TGG | - | 57448:873-892 | MS.gene07865:intron | 20.0% |
| !! | TTTCAAATTCATGGTTTAAA+TGG | - | 57448:3579-3598 | MS.gene07865:intron | 20.0% |
| !!! | AAACTATATTAGTTTCATCA+AGG | - | 57448:2254-2273 | MS.gene07865:intron | 20.0% |
| !!! | AAGAACTCTTGTTTATATTA+AGG | - | 57448:3050-3069 | MS.gene07865:intron | 20.0% |
| !!! | AATTTAGCTAGATTTGAAAT+GGG | - | 57448:1123-1142 | MS.gene07865:intron | 20.0% |
| !!! | GTTTTTCAATTTTACTTGAT+GGG | - | 57448:553-572 | MS.gene07865:CDS | 20.0% |
| !!! | TGTTTTTCAATTTTACTTGA+TGG | - | 57448:552-571 | MS.gene07865:CDS | 20.0% |
| !!! | TTTCTCATCTAATTTTTGAA+TGG | - | 57448:3748-3767 | MS.gene07865:intron | 20.0% |
| !!! | TTTTACAAGTGTTTTTAATG+TGG | - | 57448:1158-1177 | MS.gene07865:intron | 20.0% |
| ! | ATTCAAATTAATCTTACACG+AGG | - | 57448:2216-2235 | MS.gene07865:intron | 25.0% |
| ! | ATTTGAACTAAAACTACCAT+AGG | - | 57448:1309-1328 | MS.gene07865:intron | 25.0% |
| ! | CAATTTAGCTAGATTTGAAA+TGG | - | 57448:1122-1141 | MS.gene07865:intron | 25.0% |
| ! | GGTTAAGTTATCATATGTAT+CGG | - | 57448:2754-2773 | MS.gene07865:intron | 25.0% |
| ! | GTAACAACTTCAAATATTGA+TGG | + | 57448:2870-2889 | None:intergenic | 25.0% |
| ! | GTCAAAAAAAAAACTACCAA+GGG | + | 57448:1631-1650 | None:intergenic | 25.0% |
| ! | GTGAAAAGTTCAAAATCAAA+AGG | + | 57448:1096-1115 | None:intergenic | 25.0% |
| ! | GTTAAATCTGGTATCATATT+TGG | - | 57448:3226-3245 | MS.gene07865:intron | 25.0% |
| ! | TGATTGTGAACAATTTATCA+TGG | - | 57448:3445-3464 | MS.gene07865:intron | 25.0% |
| ! | TGCTAGTTAGTTAATTATCT+GGG | - | 57448:3099-3118 | MS.gene07865:intron | 25.0% |
| ! | TGTCAAAAAAAAAACTACCA+AGG | + | 57448:1632-1651 | None:intergenic | 25.0% |
| ! | TTCAAATTAATCTTACACGA+GGG | - | 57448:2217-2236 | MS.gene07865:intron | 25.0% |
| ! | TTGCTAGTTAGTTAATTATC+TGG | - | 57448:3098-3117 | MS.gene07865:intron | 25.0% |
| !! | AAAGTTTTCTTTTGAATGCA+TGG | + | 57448:3377-3396 | None:intergenic | 25.0% |
| !! | AAGTTTTCTTTTGAATGCAT+GGG | + | 57448:3376-3395 | None:intergenic | 25.0% |
| !! | AGTATCGAAAATGAATTATC+AGG | + | 57448:1766-1785 | None:intergenic | 25.0% |
| !! | GAAGTTTTCAGAGATTTTAA+GGG | - | 57448:372-391 | MS.gene07865:CDS | 25.0% |
| !! | GATTTTCTTCTTCTTGATAA+TGG | - | 57448:3261-3280 | MS.gene07865:intron | 25.0% |
| !! | GTTTTTCTTGAGAATTTCAT+TGG | - | 57448:716-735 | MS.gene07865:intron | 25.0% |
| !! | TCAATATTTGAAGTTGTTAC+TGG | - | 57448:2870-2889 | MS.gene07865:intron | 25.0% |
| !!! | ACAACTTAACAAGCTTTTTT+TGG | - | 57448:1475-1494 | MS.gene07865:CDS | 25.0% |
| !!! | AGTTTAGTTTGTTGTGAAAT+GGG | - | 57448:1278-1297 | MS.gene07865:intron | 25.0% |
| !!! | GCAGTTTCTTTTTTATTGAT+TGG | - | 57448:3716-3735 | MS.gene07865:intron | 25.0% |
| !!! | TAATCAAGTTTTAAACTTGC+TGG | - | 57448:2009-2028 | MS.gene07865:intron | 25.0% |
| !!! | TCTTTTTTCGGTATTCTATT+TGG | - | 57448:2431-2450 | MS.gene07865:intron | 25.0% |
| AAAAGTGAATGTAACTTACC+CGG | + | 57448:1950-1969 | None:intergenic | 30.0% | |
| AAGAAAAATCCTGTAGAGAA+CGG | - | 57448:2374-2393 | MS.gene07865:intron | 30.0% | |
| AATAAGCTGTTTATCCAAAC+AGG | - | 57448:1605-1624 | MS.gene07865:intron | 30.0% | |
| AATCTGGTATCATATTTGGA+TGG | - | 57448:3230-3249 | MS.gene07865:intron | 30.0% | |
| ACATGAAAATTAACCACATC+AGG | + | 57448:1211-1230 | None:intergenic | 30.0% | |
| AGCTGTTTAATAAGCTATGT+TGG | + | 57448:1519-1538 | None:intergenic | 30.0% | |
| ATATACCACCTTCACAAATT+TGG | + | 57448:3627-3646 | None:intergenic | 30.0% | |
| CAACGAAAAAAAATACTGCT+AGG | + | 57448:2314-2333 | None:intergenic | 30.0% | |
| GCTAGTTAGTTAATTATCTG+GGG | - | 57448:3100-3119 | MS.gene07865:intron | 30.0% | |
| TTAACCATAAATCTTACCAG+CGG | - | 57448:2733-2752 | MS.gene07865:intron | 30.0% | |
| TTACTTGATTCTTTCAGAGA+AGG | - | 57448:2475-2494 | MS.gene07865:intron | 30.0% | |
| TTGAATGAAATCATGTGTCT+CGG | + | 57448:996-1015 | None:intergenic | 30.0% | |
| ! | AAAGTACTCCAAATTTGTGA+AGG | - | 57448:3616-3635 | MS.gene07865:intron | 30.0% |
| ! | ATGATACCAGATTTAACTTC+TGG | + | 57448:3223-3242 | None:intergenic | 30.0% |
| ! | GGAAGTTTTCAGAGATTTTA+AGG | - | 57448:371-390 | MS.gene07865:CDS | 30.0% |
| !! | ATAAGTTTTGTGAGACTGTT+TGG | - | 57448:1428-1447 | MS.gene07865:CDS | 30.0% |
| !! | GAGTTTAGTTTGTTGTGAAA+TGG | - | 57448:1277-1296 | MS.gene07865:intron | 30.0% |
| !! | TAAGTTTTGTGAGACTGTTT+GGG | - | 57448:1429-1448 | MS.gene07865:CDS | 30.0% |
| !! | TTGTCATAAGCTGTTTTCAT+AGG | + | 57448:1459-1478 | None:intergenic | 30.0% |
| !!! | GCAGTTTCTTTTTTATTGCT+TGG | - | 57448:3686-3705 | MS.gene07865:intron | 30.0% |
| !!! | GTTATTTTTGAAGTCTGATG+TGG | - | 57448:3478-3497 | MS.gene07865:intron | 30.0% |
| !!! | TTACAGGGCATTTCTTTTTT+CGG | - | 57448:2419-2438 | MS.gene07865:intron | 30.0% |
| AACAGGTCCTAAAAGATGAT+AGG | + | 57448:1387-1406 | None:intergenic | 35.0% | |
| AATGTGAAAACATGTGCTCA+AGG | + | 57448:2179-2198 | None:intergenic | 35.0% | |
| ACACATCATGTATCAATTGC+AGG | + | 57448:1722-1741 | None:intergenic | 35.0% | |
| ACATATGATAACTTAACCGC+TGG | + | 57448:2752-2771 | None:intergenic | 35.0% | |
| ATAGGCAACAACTGACTAAA+TGG | + | 57448:1369-1388 | None:intergenic | 35.0% | |
| ATGAAACAGTGACACATACA+AGG | + | 57448:1063-1082 | None:intergenic | 35.0% | |
| CAATGAAAGTCATGAGTACA+TGG | + | 57448:2808-2827 | None:intergenic | 35.0% | |
| GATCATTGATCATGTTGAAC+AGG | + | 57448:2845-2864 | None:intergenic | 35.0% | |
| GTAATAATTCATGGGTTCTC+AGG | - | 57448:1244-1263 | MS.gene07865:intron | 35.0% | |
| GTAGATAAACCAATCCAAAC+AGG | + | 57448:1404-1423 | None:intergenic | 35.0% | |
| TAGGCAACAACTGACTAAAT+GGG | + | 57448:1368-1387 | None:intergenic | 35.0% | |
| TCATCTTTAGGTAACTCCAA+TGG | + | 57448:3815-3834 | None:intergenic | 35.0% | |
| TGAACTAAAACTACCATAGG+TGG | - | 57448:1312-1331 | MS.gene07865:intron | 35.0% | |
| TTAACCGCTGGTAAGATTTA+TGG | + | 57448:2740-2759 | None:intergenic | 35.0% | |
| TTGTGAAAAAATGGCCACTT+TGG | - | 57448:2152-2171 | MS.gene07865:intron | 35.0% | |
| TTTCATGTGTACTGTTGTTC+TGG | - | 57448:3511-3530 | MS.gene07865:intron | 35.0% | |
| ! | AACTGAATTTTCAACTGGGT+TGG | - | 57448:578-597 | MS.gene07865:CDS | 35.0% |
| ! | AGTTTTTCTTGCACTTGATG+TGG | - | 57448:1677-1696 | MS.gene07865:CDS | 35.0% |
| ! | ATCTCTGAAAACTTCCTCAA+CGG | + | 57448:367-386 | None:intergenic | 35.0% |
| ! | ATTTTTGAATGGTGAAGCAG+CGG | - | 57448:3759-3778 | MS.gene07865:intron | 35.0% |
| ! | CTCTGAAAGAATCAAGTAAC+AGG | + | 57448:2474-2493 | None:intergenic | 35.0% |
| ! | GCCATGTTATACTGATTACA+GGG | - | 57448:2404-2423 | MS.gene07865:intron | 35.0% |
| ! | GGTCAACTGAATTTTCAACT+GGG | - | 57448:574-593 | MS.gene07865:CDS | 35.0% |
| ! | GTTGTTGCCTATCATCTTTT+AGG | - | 57448:1377-1396 | MS.gene07865:intron | 35.0% |
| ! | TGCCATGTTATACTGATTAC+AGG | - | 57448:2403-2422 | MS.gene07865:intron | 35.0% |
| !! | AGGTTTGTTAGATATACCAG+TGG | + | 57448:427-446 | None:intergenic | 35.0% |
| !! | AGTTACATTCACTTTTCACG+TGG | - | 57448:1954-1973 | MS.gene07865:intron | 35.0% |
| !! | ATTATGGCACTGATGAATTC+TGG | - | 57448:3906-3925 | MS.gene07865:intron | 35.0% |
| !! | GTGTTTTTAATGTGGCTGTT+TGG | - | 57448:1166-1185 | MS.gene07865:intron | 35.0% |
| !! | TAGTTTGTTGTGAAATGGGA+AGG | - | 57448:1282-1301 | MS.gene07865:intron | 35.0% |
| !!! | ATCATCTTTTAGGACCTGTT+TGG | - | 57448:1387-1406 | MS.gene07865:intron | 35.0% |
| !!! | CAAGTTTTAAACTTGCTGGA+TGG | - | 57448:2013-2032 | MS.gene07865:intron | 35.0% |
| !!! | GGTCAACTGAATTTTCAAGT+GGG | - | 57448:782-801 | MS.gene07865:intron | 35.0% |
| AAAACTACCATAGGTGGATG+TGG | - | 57448:1318-1337 | MS.gene07865:intron | 40.0% | |
| AATCCAAAAGACAAATGCCG+TGG | + | 57448:1990-2009 | None:intergenic | 40.0% | |
| AATTCATGGGTTCTCAGGAA+TGG | - | 57448:1249-1268 | MS.gene07865:intron | 40.0% | |
| ACACTTTCGATCAGAAGTCT+CGG | + | 57448:947-966 | None:intergenic | 40.0% | |
| AGATTTGTCGAAGCCAAATC+TGG | + | 57448:2696-2715 | None:intergenic | 40.0% | |
| ATTATTTACCGCTTTCGAGC+TGG | + | 57448:2961-2980 | None:intergenic | 40.0% | |
| ATTCATGGGTTCTCAGGAAT+GGG | - | 57448:1250-1269 | MS.gene07865:intron | 40.0% | |
| CAATAAACCACATCCACCTA+TGG | + | 57448:1328-1347 | None:intergenic | 40.0% | |
| CATAGGTGGATGTGGTTTAT+TGG | - | 57448:1326-1345 | MS.gene07865:intron | 40.0% | |
| CATGACTTTCATTGTGATGC+AGG | - | 57448:2814-2833 | MS.gene07865:intron | 40.0% | |
| CCATCTCCAGAAGTTAAATC+TGG | - | 57448:3214-3233 | MS.gene07865:intron | 40.0% | |
| CTGATGATTGATACCTGATG+TGG | - | 57448:1195-1214 | MS.gene07865:intron | 40.0% | |
| CTGGATGGATGAATGCAATA+GGG | - | 57448:2028-2047 | MS.gene07865:intron | 40.0% | |
| GAACACAACCAAGAAGTTCA+AGG | + | 57448:1818-1837 | None:intergenic | 40.0% | |
| GAGGAAGATGAAGATGAACA+TGG | - | 57448:3854-3873 | MS.gene07865:intron | 40.0% | |
| GCCCTGTAATCAGTATAACA+TGG | + | 57448:2408-2427 | None:intergenic | 40.0% | |
| GGAGTTACCTAAAGATGATG+AGG | - | 57448:3817-3836 | MS.gene07865:intron | 40.0% | |
| GTACTCCAAATTTGTGAAGG+TGG | - | 57448:3619-3638 | MS.gene07865:intron | 40.0% | |
| GTTACCTAAAGATGATGAGG+TGG | - | 57448:3820-3839 | MS.gene07865:intron | 40.0% | |
| GTTCTATACCCAATGTGATC+CGG | - | 57448:1928-1947 | MS.gene07865:intron | 40.0% | |
| TAACTTACCCGGATCACATT+GGG | + | 57448:1939-1958 | None:intergenic | 40.0% | |
| TCTTCAGTTTCAAACCACAG+TGG | - | 57448:2921-2940 | MS.gene07865:intron | 40.0% | |
| TGACATTTCGTGCTTCATTG+TGG | - | 57448:1792-1811 | MS.gene07865:CDS | 40.0% | |
| TGATCTTCACACATTTCCCA+TGG | + | 57448:3961-3980 | None:intergenic | 40.0% | |
| TGCAGCAAAGAAACAAGTCA+AGG | - | 57448:2893-2912 | MS.gene07865:intron | 40.0% | |
| TGGATGGATGAATGCAATAG+GGG | - | 57448:2029-2048 | MS.gene07865:intron | 40.0% | |
| TTATGCGTAAGCGCTTATCA+TGG | - | 57448:1571-1590 | MS.gene07865:intron | 40.0% | |
| TTCTATACCCAATGTGATCC+GGG | - | 57448:1929-1948 | MS.gene07865:intron | 40.0% | |
| TTGTTTGCAATGGAAATCCC+TGG | - | 57448:3413-3432 | MS.gene07865:intron | 40.0% | |
| TTTCTTGCACTTGATGTGGA+GGG | - | 57448:1681-1700 | MS.gene07865:CDS | 40.0% | |
| ! | AGAGAAAGACTGGCTATCTT+TGG | - | 57448:2619-2638 | MS.gene07865:intron | 40.0% |
| ! | CCAGATTTAACTTCTGGAGA+TGG | + | 57448:3217-3236 | None:intergenic | 40.0% |
| ! | CTGATGAACTATTTTCTGCC+TGG | - | 57448:1881-1900 | MS.gene07865:intron | 40.0% |
| ! | GGGTCAACTGAATTTTCAAC+TGG | - | 57448:573-592 | MS.gene07865:CDS | 40.0% |
| ! | TGAAGTCTGATGTGGATTGT+GGG | - | 57448:3486-3505 | MS.gene07865:intron | 40.0% |
| ! | TGTTGTTCTGGATGTGATAG+CGG | - | 57448:3523-3542 | MS.gene07865:intron | 40.0% |
| ! | TTCTTTTGAATGCATGGGCA+AGG | + | 57448:3371-3390 | None:intergenic | 40.0% |
| ! | TTGAAGTCTGATGTGGATTG+TGG | - | 57448:3485-3504 | MS.gene07865:intron | 40.0% |
| ! | TTGCTGTTCACAGTGATTCA+TGG | - | 57448:2642-2661 | MS.gene07865:intron | 40.0% |
| ! | TTTTCTTGCACTTGATGTGG+AGG | - | 57448:1680-1699 | MS.gene07865:CDS | 40.0% |
| ! | TTTTTGAATGGTGAAGCAGC+GGG | - | 57448:3760-3779 | MS.gene07865:intron | 40.0% |
| !! | GGGTCAACTGAATTTTCAAG+TGG | - | 57448:781-800 | MS.gene07865:intron | 40.0% |
| !! | TACTACTTTGGTGCCAGATT+TGG | - | 57448:2680-2699 | MS.gene07865:intron | 40.0% |
| !!! | CTTTTAGGACCTGTTTGGAT+TGG | - | 57448:1392-1411 | MS.gene07865:intron | 40.0% |
| AAAACTACCAAGGGCCTGTT+TGG | + | 57448:1622-1641 | None:intergenic | 45.0% | |
| AAGGAGAACCTGTGCTTGTA+TGG | - | 57448:2494-2513 | MS.gene07865:intron | 45.0% | |
| ACCTAAAGATGATGAGGTGG+AGG | - | 57448:3823-3842 | MS.gene07865:intron | 45.0% | |
| ATCGCCATTGCGTACTACTT+TGG | - | 57448:2668-2687 | MS.gene07865:intron | 45.0% | |
| ATGGCATGCAAGAGAAAGAC+TGG | - | 57448:2609-2628 | MS.gene07865:intron | 45.0% | |
| CACAATCACAATAGCCTCCA+GGG | + | 57448:3433-3452 | None:intergenic | 45.0% | |
| GAAATCATGTGTCTCGGACA+CGG | + | 57448:990-1009 | None:intergenic | 45.0% | |
| GAACATGGAGAGACCTTATG+TGG | - | 57448:3869-3888 | MS.gene07865:intron | 45.0% | |
| GCAAAGTTAATGCCAAGCAC+AGG | + | 57448:2584-2603 | None:intergenic | 45.0% | |
| GCAAGTAATCCGTTCTCTAC+AGG | + | 57448:2386-2405 | None:intergenic | 45.0% | |
| GCTGGATGGATGAATGCAAT+AGG | - | 57448:2027-2046 | MS.gene07865:intron | 45.0% | |
| GCTTGGCATTAACTTTGCCA+GGG | - | 57448:2586-2605 | MS.gene07865:intron | 45.0% | |
| GGAAGTCAATTTACCTGCTG+AGG | - | 57448:2535-2554 | MS.gene07865:intron | 45.0% | |
| GGTTAAGCAGACAAAGCCAT+TGG | - | 57448:3796-3815 | MS.gene07865:intron | 45.0% | |
| GTAACTTACCCGGATCACAT+TGG | + | 57448:1940-1959 | None:intergenic | 45.0% | |
| TCACAATCACAATAGCCTCC+AGG | + | 57448:3434-3453 | None:intergenic | 45.0% | |
| TCCTCCACCTCATCATCTTT+AGG | + | 57448:3827-3846 | None:intergenic | 45.0% | |
| TGCTTGGCATTAACTTTGCC+AGG | - | 57448:2585-2604 | MS.gene07865:intron | 45.0% | |
| TGTTTATCCAAACAGGCCCT+TGG | - | 57448:1612-1631 | MS.gene07865:intron | 45.0% | |
| TTGGCTTCGACAAATCTGAC+AGG | - | 57448:2699-2718 | MS.gene07865:intron | 45.0% | |
| TTTGCAATGGAAATCCCTGG+AGG | - | 57448:3416-3435 | MS.gene07865:intron | 45.0% | |
| ! | CATTGTGGCCTTGAACTTCT+TGG | - | 57448:1807-1826 | MS.gene07865:CDS | 45.0% |
| !! | CTCTTGTTGTTGCTGCATGA+TGG | + | 57448:4022-4041 | None:intergenic | 45.0% |
| AAAACTTCCTCAACGGTGCG+TGG | + | 57448:360-379 | None:intergenic | 50.0% | |
| ACATCTGCAACAGCACAACC+AGG | + | 57448:1902-1921 | None:intergenic | 50.0% | |
| ACCAGAGACAACACGTACAC+CGG | + | 57448:1038-1057 | None:intergenic | 50.0% | |
| AGATGATGAGGTGGAGGAAC+TGG | - | 57448:3829-3848 | MS.gene07865:intron | 50.0% | |
| ATCCAAGTCCAGCTCGAAAG+CGG | - | 57448:2950-2969 | MS.gene07865:intron | 50.0% | |
| ATCTGCGAGAAGTGGTTCCA+TGG | - | 57448:3941-3960 | MS.gene07865:intron | 50.0% | |
| CATGTGCTCAAGGACCAAAG+TGG | + | 57448:2169-2188 | None:intergenic | 50.0% | |
| CTCATCAAAGCTCTCACCAC+TGG | - | 57448:408-427 | MS.gene07865:CDS | 50.0% | |
| GAGACCTTATGTGGTGCATG+CGG | - | 57448:3878-3897 | MS.gene07865:intron | 50.0% | |
| GGCACCAAAGTAGTACGCAA+TGG | + | 57448:2675-2694 | None:intergenic | 50.0% | |
| GGCATTAACTTTGCCAGGGA+TGG | - | 57448:2590-2609 | MS.gene07865:intron | 50.0% | |
| GTATAATCCACGCACCGTTG+AGG | - | 57448:350-369 | MS.gene07865:CDS | 50.0% | |
| GTCTGCTTAACCTGAGGTTC+TGG | + | 57448:3788-3807 | None:intergenic | 50.0% | |
| GTTAATGCCAAGCACAGGCT+CGG | + | 57448:2579-2598 | None:intergenic | 50.0% | |
| TAGGGAAGCCATACAAGCAC+AGG | + | 57448:2505-2524 | None:intergenic | 50.0% | |
| TCTGCGAGAAGTGGTTCCAT+GGG | - | 57448:3942-3961 | MS.gene07865:intron | 50.0% | |
| TGACTTCCCACTGCTCACTA+GGG | + | 57448:2523-2542 | None:intergenic | 50.0% | |
| TGATATGCTCAGCCCTAGCA+GGG | + | 57448:3985-4004 | None:intergenic | 50.0% | |
| TGTGAAGATCACCCCTGCTA+GGG | - | 57448:3970-3989 | MS.gene07865:CDS | 50.0% | |
| TTAATGCCAAGCACAGGCTC+GGG | + | 57448:2578-2597 | None:intergenic | 50.0% | |
| TTGACTTCCCACTGCTCACT+AGG | + | 57448:2524-2543 | None:intergenic | 50.0% | |
| TTGATATGCTCAGCCCTAGC+AGG | + | 57448:3986-4005 | None:intergenic | 50.0% | |
| TTTCTCTTGCATGCCATCCC+TGG | + | 57448:2606-2625 | None:intergenic | 50.0% | |
| ! | GGCTTTGTCTGCTTAACCTG+AGG | + | 57448:3794-3813 | None:intergenic | 50.0% |
| ! | GTGCCACGGCATTTGTCTTT+TGG | - | 57448:1984-2003 | MS.gene07865:intron | 50.0% |
| !! | ACTTGGATTTGCTGCCACTG+TGG | + | 57448:2938-2957 | None:intergenic | 50.0% |
| !! | GATTTTAAGGGTCGTCGTGC+TGG | - | 57448:384-403 | MS.gene07865:CDS | 50.0% |
| !!! | CACGTGGTAGTTTTGTGCCA+CGG | - | 57448:1970-1989 | MS.gene07865:intron | 50.0% |
| ACCGGTGTACGTGTTGTCTC+TGG | - | 57448:1034-1053 | MS.gene07865:intron | 55.0% | |
| AGAGACAACACGTACACCGG+TGG | + | 57448:1035-1054 | None:intergenic | 55.0% | |
| ATGGCTTCCCTAGTGAGCAG+TGG | - | 57448:2513-2532 | MS.gene07865:intron | 55.0% | |
| CTCACCGCATGCACCACATA+AGG | + | 57448:3885-3904 | None:intergenic | 55.0% | |
| GATATGCTCAGCCCTAGCAG+GGG | + | 57448:3984-4003 | None:intergenic | 55.0% | |
| GCTGTGACATCTGCGAGAAG+TGG | - | 57448:3933-3952 | MS.gene07865:intron | 55.0% | |
| GGTGCATGCGGTGAGCATTA+TGG | - | 57448:3890-3909 | MS.gene07865:intron | 55.0% | |
| GTGTGAAGATCACCCCTGCT+AGG | - | 57448:3969-3988 | MS.gene07865:CDS | 55.0% | |
| TACCGCTTTCGAGCTGGACT+TGG | + | 57448:2955-2974 | None:intergenic | 55.0% | |
| TGGCTTCCCTAGTGAGCAGT+GGG | - | 57448:2514-2533 | MS.gene07865:intron | 55.0% | |
| TCTCGGACACGGAGACACGT+CGG | + | 57448:979-998 | None:intergenic | 60.0% | |
| TCTGGCGGAACTTCCTCAGC+AGG | + | 57448:2551-2570 | None:intergenic | 60.0% | |
| TGAGGTGGAGGAACTGGACG+AGG | - | 57448:3835-3854 | MS.gene07865:intron | 60.0% | |
| AGCACAGGCTCGGGAAGCTC+TGG | + | 57448:2569-2588 | None:intergenic | 65.0% | |
| CACGGAGACACGTCGGACAC+AGG | + | 57448:972-991 | None:intergenic | 65.0% | |
| GAGCTTCCCGAGCCTGTGCT+TGG | - | 57448:2569-2588 | MS.gene07865:intron | 65.0% | |
| ! | ACAGGCTCGGGAAGCTCTGG+CGG | + | 57448:2566-2585 | None:intergenic | 65.0% |
| ! | GCAGCGGGCTCCAGAACCTC+AGG | - | 57448:3775-3794 | MS.gene07865:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 57448 | gene | 333 | 4054 | 333 | ID=MS.gene07865 |
| 57448 | mRNA | 333 | 4054 | 333 | ID=MS.gene07865.t1;Parent=MS.gene07865 |
| 57448 | exon | 3958 | 4054 | 3958 | ID=MS.gene07865.t1.exon1;Parent=MS.gene07865.t1 |
| 57448 | CDS | 3958 | 4054 | 3958 | ID=cds.MS.gene07865.t1;Parent=MS.gene07865.t1 |
| 57448 | exon | 2437 | 2469 | 2437 | ID=MS.gene07865.t1.exon2;Parent=MS.gene07865.t1 |
| 57448 | CDS | 2437 | 2469 | 2437 | ID=cds.MS.gene07865.t1;Parent=MS.gene07865.t1 |
| 57448 | exon | 1667 | 1895 | 1667 | ID=MS.gene07865.t1.exon3;Parent=MS.gene07865.t1 |
| 57448 | CDS | 1667 | 1895 | 1667 | ID=cds.MS.gene07865.t1;Parent=MS.gene07865.t1 |
| 57448 | exon | 1416 | 1551 | 1416 | ID=MS.gene07865.t1.exon4;Parent=MS.gene07865.t1 |
| 57448 | CDS | 1416 | 1551 | 1416 | ID=cds.MS.gene07865.t1;Parent=MS.gene07865.t1 |
| 57448 | exon | 333 | 608 | 333 | ID=MS.gene07865.t1.exon5;Parent=MS.gene07865.t1 |
| 57448 | CDS | 333 | 608 | 333 | ID=cds.MS.gene07865.t1;Parent=MS.gene07865.t1 |
| Gene Sequence |
| Protein sequence |
