AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene07934

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07934.t1 MTR_0558s0020 88.424 311 21 1 1 311 1 296 0.0 573
MS.gene07934.t1 MTR_1g083640 92.657 286 21 0 1 286 1 286 0.0 559
MS.gene07934.t1 MTR_8g446020 76.206 311 19 2 1 311 1 256 4.42e-161 467
MS.gene07934.t1 MTR_2g014100 86.957 253 24 2 1 252 1 245 5.24e-154 449
MS.gene07934.t1 MTR_6g090505 88.186 237 28 0 81 317 1 237 3.91e-148 438
MS.gene07934.t1 MTR_6g090505 65.741 108 10 2 406 511 224 306 4.36e-34 134
MS.gene07934.t1 MTR_6g090505 86.047 43 6 0 587 629 320 362 3.21e-16 81.6
MS.gene07934.t1 MTR_0337s0040 72.464 276 22 2 1 276 1 222 5.08e-129 384
MS.gene07934.t1 MTR_3g008240 83.028 218 22 1 1 218 1 203 1.10e-123 369
MS.gene07934.t1 MTR_4g040430 83.486 218 16 2 1 218 1 198 6.75e-123 367
MS.gene07934.t1 MTR_0337s0060 60.191 314 27 4 463 773 21 239 4.02e-112 341
MS.gene07934.t1 MTR_5g071590 84.783 184 25 1 1 184 1 181 2.37e-108 329
MS.gene07934.t1 MTR_1g055240 93.662 142 9 0 107 248 3 144 2.27e-91 283
MS.gene07934.t1 MTR_0019s0290 88.235 153 15 1 100 249 8 160 1.43e-90 281
MS.gene07934.t1 MTR_3g028680 79.747 158 29 1 632 786 1 158 1.42e-81 259
MS.gene07934.t1 MTR_2g067090 80.645 155 27 1 635 786 99 253 1.44e-78 255
MS.gene07934.t1 MTR_4g133495 64.641 181 35 3 590 764 88 245 3.54e-67 224
MS.gene07934.t1 MTR_4g133340 64.641 181 35 3 590 764 88 245 3.54e-67 224
MS.gene07934.t1 MTR_1281s0010 92.661 109 8 0 35 143 1 109 2.44e-65 213
MS.gene07934.t1 MTR_6g051425 30.240 334 197 7 56 368 22 340 3.39e-38 145
MS.gene07934.t1 MTR_2g067130 87.179 78 10 0 709 786 46 123 1.89e-37 137
MS.gene07934.t1 MTR_8g046060 78.125 96 12 2 1 95 91 178 3.41e-36 136
MS.gene07934.t1 MTR_4g008820 75.789 95 8 1 1 95 125 204 1.00e-33 138
MS.gene07934.t1 MTR_1g070355 23.779 307 213 5 3 307 24 311 2.39e-19 93.2
MS.gene07934.t1 MTR_0337s0050 80.556 36 7 0 275 310 14 49 1.53e-14 69.7
MS.gene07934.t1 MTR_1g013060 30.093 216 132 8 56 269 29 227 1.84e-13 71.2
MS.gene07934.t1 MTR_0402s0040 25.946 185 118 4 65 249 40 205 4.76e-13 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07934.t1 AT4G38180 26.887 636 389 15 50 679 72 637 1.62e-68 242
MS.gene07934.t1 AT4G15090 25.648 733 457 18 66 788 66 720 2.77e-61 222
MS.gene07934.t1 AT4G15090 25.648 733 457 18 66 788 66 720 2.77e-61 222
MS.gene07934.t1 AT4G15090 25.648 733 457 18 66 788 66 720 2.77e-61 222
MS.gene07934.t1 AT4G15090 25.648 733 457 18 66 788 66 720 2.77e-61 222
MS.gene07934.t1 AT4G15090 25.648 733 457 18 66 788 66 720 2.77e-61 222
MS.gene07934.t1 AT3G06250 25.078 642 360 17 39 675 178 703 2.09e-51 192
MS.gene07934.t1 AT3G06250 25.078 642 360 17 39 675 178 703 2.09e-51 192
MS.gene07934.t1 AT3G06250 25.078 642 360 17 39 675 178 703 2.09e-51 192
MS.gene07934.t1 AT1G76320 25.185 675 411 19 66 734 12 598 2.32e-50 188
MS.gene07934.t1 AT1G76320 25.223 674 410 19 66 733 12 597 5.14e-50 188
MS.gene07934.t1 AT1G76320 25.223 674 410 19 66 733 12 597 5.14e-50 188
MS.gene07934.t1 AT2G27110 25.501 549 353 12 229 775 36 530 5.33e-50 187
MS.gene07934.t1 AT1G76320 25.223 674 410 19 66 733 12 597 5.48e-50 188
MS.gene07934.t1 AT3G22170 23.983 688 415 17 48 722 67 659 1.46e-49 188
MS.gene07934.t1 AT3G22170 23.983 688 415 17 48 722 67 659 1.46e-49 188
MS.gene07934.t1 AT2G27110 25.551 544 349 12 229 770 181 670 1.59e-49 188
MS.gene07934.t1 AT2G27110 25.551 544 349 12 229 770 181 670 1.59e-49 188
MS.gene07934.t1 AT5G18960 24.113 705 409 21 37 733 197 783 8.04e-46 176
MS.gene07934.t1 AT5G18960 24.113 705 409 21 37 733 197 783 8.04e-46 176
MS.gene07934.t1 AT1G10240 24.921 630 383 20 56 673 53 604 3.25e-45 173
MS.gene07934.t1 AT1G10240 24.921 630 383 20 56 673 53 604 3.25e-45 173
MS.gene07934.t1 AT4G38170 23.944 497 299 14 251 733 24 455 1.24e-43 166
MS.gene07934.t1 AT1G80010 25.118 637 384 22 57 676 101 661 1.12e-40 160
MS.gene07934.t1 AT5G28530 24.682 628 378 18 65 674 69 619 1.55e-40 159
MS.gene07934.t1 AT2G32250 23.942 685 389 20 57 732 44 605 2.00e-40 160
MS.gene07934.t1 AT2G32250 24.123 684 389 20 57 732 3 564 2.16e-40 159
MS.gene07934.t1 AT2G32250 23.929 677 383 20 57 724 44 597 2.49e-40 160
MS.gene07934.t1 AT2G32250 23.929 677 383 20 57 724 44 597 2.49e-40 160
MS.gene07934.t1 AT2G32250 23.929 677 383 20 57 724 44 597 2.49e-40 160
MS.gene07934.t1 AT2G32250 23.929 677 383 20 57 724 44 597 2.61e-40 159
MS.gene07934.t1 AT2G32250 23.929 677 383 20 57 724 44 597 2.61e-40 159
MS.gene07934.t1 AT2G32250 24.123 684 389 20 57 732 3 564 3.10e-40 159
MS.gene07934.t1 AT5G28530 24.522 628 375 19 65 674 69 615 1.06e-39 157
MS.gene07934.t1 AT5G28530 24.522 628 375 19 65 674 69 615 1.06e-39 157
MS.gene07934.t1 AT1G52520 23.237 624 399 17 57 676 91 638 3.10e-35 143
MS.gene07934.t1 AT4G19990 24.439 446 288 10 57 499 27 426 1.76e-30 129
MS.gene07934.t1 AT4G19990 36.082 97 52 3 607 703 497 583 6.33e-11 66.6
MS.gene07934.t1 AT4G19990 24.439 446 288 10 57 499 27 426 1.77e-30 129
MS.gene07934.t1 AT4G19990 34.021 97 54 2 607 703 497 583 5.87e-11 66.6
MS.gene07934.t1 AT4G19990 24.439 446 288 10 57 499 27 426 1.77e-30 129
MS.gene07934.t1 AT4G19990 34.021 97 54 2 607 703 497 583 5.87e-11 66.6
MS.gene07934.t1 AT4G19990 24.439 446 288 10 57 499 27 426 1.82e-30 129
MS.gene07934.t1 AT4G19990 34.021 97 54 2 607 703 497 583 5.86e-11 66.6
MS.gene07934.t1 AT4G19990 24.439 446 288 10 57 499 27 426 1.82e-30 129
MS.gene07934.t1 AT4G19990 34.021 97 54 2 607 703 497 583 5.86e-11 66.6
MS.gene07934.t1 AT4G19990 24.439 446 288 10 57 499 41 440 1.94e-30 129
MS.gene07934.t1 AT4G19990 34.021 97 54 2 607 703 511 597 6.03e-11 66.6
MS.gene07934.t1 AT4G19990 29.104 268 183 4 235 499 106 369 6.93e-30 127
MS.gene07934.t1 AT4G19990 36.082 97 52 3 607 703 440 526 5.65e-11 66.6
MS.gene07934.t1 AT5G28530 22.492 618 341 21 65 674 69 556 8.34e-22 101
MS.gene07934.t1 AT5G28530 22.330 618 338 22 65 674 69 552 3.68e-21 99.0

Find 115 sgRNAs with CRISPR-Local

Find 224 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATGCTGAGTTGGACTTTA+AGG 0.133287 6.4:-12102491 MS.gene07934:CDS
AGTCGCTTCTTTGACTTAAT+TGG 0.149305 6.4:+12101671 None:intergenic
TAAATTTCAGCTGCCTTTAT+TGG 0.156227 6.4:-12103081 MS.gene07934:intron
CTTTAGTCATTTCAACATTA+TGG 0.194287 6.4:-12102533 MS.gene07934:CDS
AATCGTCTGTGGTTTCTTAT+TGG 0.195298 6.4:+12102954 None:intergenic
TTCCATGATTCTTTATTTCT+AGG 0.216803 6.4:+12104346 None:intergenic
TTCTTTGACTTAATTGGATT+TGG 0.266522 6.4:+12101677 None:intergenic
TCTGTTGTTGGCCTGTTGTT+AGG 0.292589 6.4:+12104136 None:intergenic
CGATCATGATCTTCAAAACT+TGG 0.305304 6.4:+12102193 None:intergenic
TTACTTCTCGAAATGATCTA+AGG 0.311482 6.4:+12103945 None:intergenic
GCCTTCGAATGTTGATGTTT+TGG 0.322848 6.4:-12102242 MS.gene07934:CDS
CAACTAGATTATTCTCTATT+CGG 0.323831 6.4:-12103629 MS.gene07934:CDS
TTGAAGATCTTGGAGTTCTT+AGG 0.331625 6.4:-12102073 MS.gene07934:CDS
GCATACGATTTGCGTAAGTT+TGG 0.338878 6.4:+12102677 None:intergenic
GCCGATATTTATTGTTTGTT+CGG 0.341758 6.4:+12103579 None:intergenic
ATGATTGTCAAAACCAATAA+AGG 0.357876 6.4:+12103068 None:intergenic
CTCGACGGTGTTCTTGAAGC+TGG 0.383392 6.4:-12101833 MS.gene07934:CDS
TCCATGATTCTTTATTTCTA+GGG 0.387327 6.4:+12104347 None:intergenic
AACAATAAATATCGGCCATT+AGG 0.388497 6.4:-12103572 MS.gene07934:intron
ACCGAACAAACAATAAATAT+CGG 0.389395 6.4:-12103580 MS.gene07934:CDS
GAGAACGTCTTATGAAGTTA+TGG 0.394356 6.4:-12103870 MS.gene07934:CDS
TTTGGTCTTTCTTTGAACTT+TGG 0.398856 6.4:+12101695 None:intergenic
TTCCTTCAAATACTATTATG+AGG 0.399583 6.4:-12102359 MS.gene07934:CDS
GAAGGCCTACCTCAGACTTT+AGG 0.402909 6.4:-12102708 MS.gene07934:CDS
CATGTCGTATGTTTGAGAAC+AGG 0.415108 6.4:-12102117 MS.gene07934:CDS
GTCTTATGAAGTTATGGGTC+AGG 0.415385 6.4:-12103864 MS.gene07934:CDS
TATGCATTGGTCTTTAGCTT+GGG 0.419606 6.4:-12102659 MS.gene07934:CDS
GAAGTTATGGGTCAGGGAGT+TGG 0.426260 6.4:-12103857 MS.gene07934:CDS
CGTTATGTTTGTAACAAAGA+AGG 0.427485 6.4:-12104184 MS.gene07934:CDS
AAAACACCTGGAAAACTATT+CGG 0.428349 6.4:+12102895 None:intergenic
GCTGTTGGTGAAACATCTGC+TGG 0.428855 6.4:-12101734 MS.gene07934:CDS
CGAGAAGTAAATGAAGTTCA+AGG 0.430014 6.4:-12103932 MS.gene07934:CDS
TTGATATCGTTGTGCTTGAC+TGG 0.433430 6.4:+12101925 None:intergenic
GTATGCATTGGTCTTTAGCT+TGG 0.441227 6.4:-12102660 MS.gene07934:CDS
TTCTTTGAACTTTGGTGCGG+TGG 0.447203 6.4:+12101703 None:intergenic
GAAAGGGTTGGTTGTAAAGC+TGG 0.447509 6.4:-12104067 MS.gene07934:CDS
ATGTGTATAAGATATATAGA+TGG 0.452819 6.4:-12104015 MS.gene07934:CDS
CTTGCTTTGCATTTATTCAC+AGG 0.460007 6.4:-12102393 MS.gene07934:CDS
GCTCTTATAAATTCTAAAGC+TGG 0.462891 6.4:-12103902 MS.gene07934:CDS
GACCGCATCAGCTGACTGTT+GGG 0.463150 6.4:+12102439 None:intergenic
CGCTTTAAAATATATTGTCC+AGG 0.464885 6.4:+12102016 None:intergenic
ACCTGTGGACTGTCTGTTGT+TGG 0.465317 6.4:+12104124 None:intergenic
AGAACGTCTTATGAAGTTAT+GGG 0.466325 6.4:-12103869 MS.gene07934:CDS
GTTTACTTAATCCTAACAAC+AGG 0.470860 6.4:-12104147 MS.gene07934:CDS
ATCATGATCGATTTGATGAA+AGG 0.476999 6.4:-12102180 MS.gene07934:CDS
CAGGTATTGTCTTCAAAGAA+TGG 0.481668 6.4:+12102035 None:intergenic
GAAAGAAAATCCTGAGGAAA+GGG 0.482223 6.4:-12104083 MS.gene07934:CDS
TTTAAGTCTGAAAACCGAAA+AGG 0.483010 6.4:+12103818 None:intergenic
CCCCTAGAAATAAAGAATCA+TGG 0.483435 6.4:-12104348 MS.gene07934:CDS
CTCCTCATAATAGTATTTGA+AGG 0.485089 6.4:+12102357 None:intergenic
GATCATGATCTTCAAAACTT+GGG 0.487945 6.4:+12102194 None:intergenic
CATTCTTTGAAGACAATACC+TGG 0.489494 6.4:-12102034 MS.gene07934:CDS
TATGAGGAGGACACAACAAA+AGG 0.490908 6.4:-12102343 MS.gene07934:CDS
GTCTTCAGTGCCAACATTGA+CGG 0.491796 6.4:+12101949 None:intergenic
TTGAAGACTTAGATGGCGTC+GGG 0.493598 6.4:+12101765 None:intergenic
CTGTTGGTGAAACATCTGCT+GGG 0.493682 6.4:-12101733 MS.gene07934:CDS
ACATTATGGTTCAGAGAATG+AGG 0.494022 6.4:-12102519 MS.gene07934:CDS
TTACAACCAACCCTTTCCTC+AGG 0.499374 6.4:+12104073 None:intergenic
TGAATAAATGCAAAGCAAGA+AGG 0.503349 6.4:+12102397 None:intergenic
TCTTTGAACTTTGGTGCGGT+GGG 0.503874 6.4:+12101704 None:intergenic
AGCTGGAATATATTTGAAGC+TGG 0.507410 6.4:-12104050 MS.gene07934:CDS
GAGGGATAATCATGCTGAGT+TGG 0.508852 6.4:-12102500 MS.gene07934:CDS
ACAAAACAAGAAATCTGATA+AGG 0.511435 6.4:-12104218 MS.gene07934:CDS
CTAAGGTAACACGAATGCTC+TGG 0.517941 6.4:+12103962 None:intergenic
GAATAAATGCAAAGCAAGAA+GGG 0.521406 6.4:+12102398 None:intergenic
GTCAGCATGAATCATTGCTA+GGG 0.522802 6.4:+12104387 None:intergenic
GGTAATTATGCATATAACAC+TGG 0.523547 6.4:-12104280 MS.gene07934:CDS
TAACAAAGAAGGTTTCAAGA+AGG 0.525236 6.4:-12104173 MS.gene07934:CDS
TAAGATATATAGATGGGATG+TGG 0.528498 6.4:-12104008 MS.gene07934:CDS
CATAATAGTATTTGAAGGAA+AGG 0.529686 6.4:+12102362 None:intergenic
TGGGCTTTGTTCATGGCACA+TGG 0.532868 6.4:-12102869 MS.gene07934:CDS
GAATGCTCTGGTTTATGTAA+TGG 0.534744 6.4:+12103974 None:intergenic
TGTCAGCATGAATCATTGCT+AGG 0.540740 6.4:+12104386 None:intergenic
ATGAGGAGGACACAACAAAA+GGG 0.542065 6.4:-12102342 MS.gene07934:CDS
AATCGAACAAGTGAGTGGTC+TGG 0.543268 6.4:+12102556 None:intergenic
AACAAAGAAGGTTTCAAGAA+GGG 0.545537 6.4:-12104172 MS.gene07934:CDS
TGAAAGAAAATCCTGAGGAA+AGG 0.546841 6.4:-12104084 MS.gene07934:CDS
GTTATGGGTCAGGGAGTTGG+AGG 0.547221 6.4:-12103854 MS.gene07934:CDS
AACACAATAACGCACTAGCC+TGG 0.552106 6.4:+12102923 None:intergenic
AAGATCTTGGAGTTCTTAGG+TGG 0.553166 6.4:-12102070 MS.gene07934:CDS
CCATGATTCTTTATTTCTAG+GGG 0.553992 6.4:+12104348 None:intergenic
ATGTCGTATGTTTGAGAACA+GGG 0.560861 6.4:-12102116 MS.gene07934:CDS
GGCCTACCTCAGACTTTAGG+TGG 0.565384 6.4:-12102705 MS.gene07934:CDS
TCTTCAAAAGTAGCTGCTGT+TGG 0.568528 6.4:-12101749 MS.gene07934:CDS
GGACCGCATCAGCTGACTGT+TGG 0.570066 6.4:+12102438 None:intergenic
TTTGAAGACTTAGATGGCGT+CGG 0.575863 6.4:+12101764 None:intergenic
ATCATGATCTTCAAAACTTG+GGG 0.577988 6.4:+12102195 None:intergenic
ATGAAATCGACCGTCAATGT+TGG 0.583819 6.4:-12101959 MS.gene07934:CDS
ATCCCAACAGTCAGCTGATG+CGG 0.597403 6.4:-12102441 MS.gene07934:CDS
CTTACGCAAATCGTATGCAT+TGG 0.597846 6.4:-12102672 MS.gene07934:CDS
TATGATGATGCTGATAATGA+CGG 0.599988 6.4:-12102265 MS.gene07934:CDS
TGTGTATAAGATATATAGAT+GGG 0.601002 6.4:-12104014 MS.gene07934:CDS
GAAAATCCTGAGGAAAGGGT+TGG 0.602229 6.4:-12104079 MS.gene07934:CDS
TCACTGATTCATGCTGAGAG+TGG 0.606950 6.4:-12104427 MS.gene07934:CDS
TCCAAAACATCAACATTCGA+AGG 0.607058 6.4:+12102241 None:intergenic
CTTCAAATACTATTATGAGG+AGG 0.607664 6.4:-12102356 MS.gene07934:CDS
TCTTATGAAGTTATGGGTCA+GGG 0.609153 6.4:-12103863 MS.gene07934:CDS
GCCAACAACAGACAGTCCAC+AGG 0.619933 6.4:-12104125 MS.gene07934:CDS
ATGATGATGCTGATAATGAC+GGG 0.620534 6.4:-12102264 MS.gene07934:CDS
ACATCAACTTCATCTGAGAG+TGG 0.622661 6.4:-12104472 MS.gene07934:CDS
TTCACAAACTCAATAACCTG+TGG 0.626760 6.4:+12104109 None:intergenic
TGTTGGTGAAACATCTGCTG+GGG 0.639082 6.4:-12101732 MS.gene07934:CDS
CATTATGGTTCAGAGAATGA+GGG 0.643278 6.4:-12102518 MS.gene07934:CDS
TGGTCTGTATAAATCGTCTG+TGG 0.650424 6.4:+12102943 None:intergenic
GATTTCATCTTATCGACAGA+CGG 0.652942 6.4:+12101974 None:intergenic
GACAAGCCACCTAAAGTCTG+AGG 0.653221 6.4:+12102699 None:intergenic
TGTCGTATGTTTGAGAACAG+GGG 0.653807 6.4:-12102115 MS.gene07934:CDS
TAAAGAATCGAACAAGTGAG+TGG 0.654901 6.4:+12102551 None:intergenic
TCTTTCTTTGAACTTTGGTG+CGG 0.659854 6.4:+12101700 None:intergenic
AATAAATGCAAAGCAAGAAG+GGG 0.664515 6.4:+12102399 None:intergenic
TCAGCATGAATCATTGCTAG+GGG 0.681156 6.4:+12104388 None:intergenic
AGCCACCTAAAGTCTGAGGT+AGG 0.684957 6.4:+12102703 None:intergenic
AGGGGTGTACTTGTTTACAA+CGG 0.695086 6.4:+12102417 None:intergenic
GAAAGTGAAAGAAAATCCTG+AGG 0.705537 6.4:-12104089 MS.gene07934:CDS
ACAGACGATTTATACAGACC+AGG 0.720235 6.4:-12102941 MS.gene07934:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATTTTGATATGATTTAT+TGG - chr6.4:12103616-12103635 MS.gene07934:CDS 10.0%
!! AAACCAAAATAATTATCTAA+TGG + chr6.4:12103768-12103787 None:intergenic 15.0%
!! GTTTAACTATTATTGATAAA+TGG + chr6.4:12103856-12103875 None:intergenic 15.0%
!!! AAACCATTAGATAATTATTT+TGG - chr6.4:12103762-12103781 MS.gene07934:CDS 15.0%
!!! ATGATGATAAATTGTTTTAA+TGG - chr6.4:12102373-12102392 MS.gene07934:CDS 15.0%
!!! ATGTATTGATGATTATATTT+TGG - chr6.4:12103669-12103688 MS.gene07934:CDS 15.0%
!!! ATTGATTGTTTTTATAAGTT+TGG - chr6.4:12103556-12103575 MS.gene07934:intron 15.0%
!!! TTTTATAAGTTTGGTTTTTT+AGG - chr6.4:12103565-12103584 MS.gene07934:intron 15.0%
!!! TTTTGATGAGTTAAATAATT+TGG - chr6.4:12102303-12102322 MS.gene07934:CDS 15.0%
!!! TTTTTAACAATTTCTTTGTT+TGG + chr6.4:12104208-12104227 None:intergenic 15.0%
!! AAACCATAAGTAGTATTTAA+TGG + chr6.4:12103811-12103830 None:intergenic 20.0%
!! AAACCATTAAATACTACTTA+TGG - chr6.4:12103805-12103824 MS.gene07934:CDS 20.0%
!! ACATACTTATTAGAATACTT+AGG - chr6.4:12101822-12101841 MS.gene07934:CDS 20.0%
!! ACTTATAAAAACAATCAATC+AGG + chr6.4:12103555-12103574 None:intergenic 20.0%
!! ATGTGTATAAGATATATAGA+TGG - chr6.4:12101088-12101107 MS.gene07934:intron 20.0%
!! ATTATGAAAAAGCTAGAAAA+AGG - chr6.4:12103463-12103482 MS.gene07934:intron 20.0%
!! CTTATAAAAACAATCAATCA+GGG + chr6.4:12103554-12103573 None:intergenic 20.0%
!! TGAATATCATAGTAAAAAGA+TGG + chr6.4:12101402-12101421 None:intergenic 20.0%
!! TGTGTATAAGATATATAGAT+GGG - chr6.4:12101089-12101108 MS.gene07934:intron 20.0%
!!! AAAGTGATTGAAGATTTTTA+TGG - chr6.4:12100802-12100821 MS.gene07934:intron 20.0%
!!! AATCAGATTTTGACTATAAT+TGG - chr6.4:12102344-12102363 MS.gene07934:CDS 20.0%
!!! ACTTTTTCGTAAAAATTAGA+GGG - chr6.4:12103899-12103918 MS.gene07934:CDS 20.0%
!!! ATCAGATTTTGACTATAATT+GGG - chr6.4:12102345-12102364 MS.gene07934:CDS 20.0%
!!! TGATAAATTGTTTTAATGGA+AGG - chr6.4:12102377-12102396 MS.gene07934:CDS 20.0%
!!! TTAATTTCATTAAGTTGTTC+TGG - chr6.4:12101592-12101611 MS.gene07934:intron 20.0%
!!! TTCTTATAATTTGTGATTAC+AGG - chr6.4:12101885-12101904 MS.gene07934:CDS 20.0%
! ACAAAACAAGAAATCTGATA+AGG - chr6.4:12100885-12100904 MS.gene07934:intron 25.0%
! ACCGAACAAACAATAAATAT+CGG - chr6.4:12101523-12101542 MS.gene07934:intron 25.0%
! AGTAAAAAACACTAACCTAA+TGG + chr6.4:12101549-12101568 None:intergenic 25.0%
! ATGATTGTCAAAACCAATAA+AGG + chr6.4:12102038-12102057 None:intergenic 25.0%
! CAAACTTAAATGATGTTGAT+TGG - chr6.4:12101746-12101765 MS.gene07934:CDS 25.0%
! CAACTAGATTATTCTCTATT+CGG - chr6.4:12101474-12101493 MS.gene07934:intron 25.0%
! CATAATAGTATTTGAAGGAA+AGG + chr6.4:12102744-12102763 None:intergenic 25.0%
! CTTTAGTCATTTCAACATTA+TGG - chr6.4:12102570-12102589 MS.gene07934:CDS 25.0%
! TAAGTTTGTATCAAACCAAA+TGG + chr6.4:12101734-12101753 None:intergenic 25.0%
! TCTTACTTATTTGAACTACA+CGG - chr6.4:12101668-12101687 MS.gene07934:CDS 25.0%
! TTCCTTCAAATACTATTATG+AGG - chr6.4:12102744-12102763 MS.gene07934:CDS 25.0%
!! AACTTTGAAAAACTTCTCAA+AGG + chr6.4:12102791-12102810 None:intergenic 25.0%
!! AGAAAAATTTTAGATGACTC+TGG + chr6.4:12103252-12103271 None:intergenic 25.0%
!! ATAACACTGGATTTTCTATT+AGG - chr6.4:12100836-12100855 MS.gene07934:intron 25.0%
!! CAAAGTTTTCACAATTGATA+AGG - chr6.4:12102804-12102823 MS.gene07934:CDS 25.0%
!! GAATTTGAGTTTAATGTGAA+TGG - chr6.4:12104043-12104062 MS.gene07934:CDS 25.0%
!! TGTTGTATTTTGTTCTGATA+TGG - chr6.4:12101993-12102012 MS.gene07934:CDS 25.0%
!! TTAACCATGTTGTTTGTTTA+GGG - chr6.4:12101693-12101712 MS.gene07934:CDS 25.0%
!! TTCCATGATTCTTTATTTCT+AGG + chr6.4:12100760-12100779 None:intergenic 25.0%
!! TTCTTTGACTTAATTGGATT+TGG + chr6.4:12103429-12103448 None:intergenic 25.0%
!! TTTAACCATGTTGTTTGTTT+AGG - chr6.4:12101692-12101711 MS.gene07934:CDS 25.0%
!!! AAGACATAGCTAGTATTTTT+TGG - chr6.4:12101436-12101455 MS.gene07934:intron 25.0%
!!! ATTTATATTTTGAACTGCCT+AGG - chr6.4:12101770-12101789 MS.gene07934:CDS 25.0%
!!! CACTTTTTCGTAAAAATTAG+AGG - chr6.4:12103898-12103917 MS.gene07934:CDS 25.0%
!!! GACAATATATTTTAAAGCGT+TGG - chr6.4:12103091-12103110 MS.gene07934:intron 25.0%
!!! TATTGGTTTTCAGAGTAAAA+TGG - chr6.4:12104314-12104333 MS.gene07934:CDS 25.0%
!!! TCATCTAAAATTTTTCTCGA+CGG - chr6.4:12103255-12103274 MS.gene07934:intron 25.0%
!!! TCCATGATTCTTTATTTCTA+GGG + chr6.4:12100759-12100778 None:intergenic 25.0%
AAAACACCTGGAAAACTATT+CGG + chr6.4:12102211-12102230 None:intergenic 30.0%
AAACCAATATGCTGTGTAAA+TGG + chr6.4:12104303-12104322 None:intergenic 30.0%
AAACCATTTACACAGCATAT+TGG - chr6.4:12104297-12104316 MS.gene07934:CDS 30.0%
AAATCCCTAAACAAACAACA+TGG + chr6.4:12101700-12101719 None:intergenic 30.0%
AACAAAGAAGGTTTCAAGAA+GGG - chr6.4:12100931-12100950 MS.gene07934:intron 30.0%
AACAATAAATATCGGCCATT+AGG - chr6.4:12101531-12101550 MS.gene07934:intron 30.0%
AAGAAGAAGGTTTAATGTTG+GGG + chr6.4:12103976-12103995 None:intergenic 30.0%
AATAAATGCAAAGCAAGAAG+GGG + chr6.4:12102707-12102726 None:intergenic 30.0%
AGAACGTCTTATGAAGTTAT+GGG - chr6.4:12101234-12101253 MS.gene07934:intron 30.0%
AGAAGAAGAAGGTTTAATGT+TGG + chr6.4:12103978-12103997 None:intergenic 30.0%
ATCATGATCTTCAAAACTTG+GGG + chr6.4:12102911-12102930 None:intergenic 30.0%
CGTTATGTTTGTAACAAAGA+AGG - chr6.4:12100919-12100938 MS.gene07934:intron 30.0%
CTCCTCATAATAGTATTTGA+AGG + chr6.4:12102749-12102768 None:intergenic 30.0%
CTTACTTATTTGAACTACAC+GGG - chr6.4:12101669-12101688 MS.gene07934:CDS 30.0%
CTTCAAATACTATTATGAGG+AGG - chr6.4:12102747-12102766 MS.gene07934:CDS 30.0%
GAAGAAGAAGGTTTAATGTT+GGG + chr6.4:12103977-12103996 None:intergenic 30.0%
GAATAAATGCAAAGCAAGAA+GGG + chr6.4:12102708-12102727 None:intergenic 30.0%
GAGAATGCAAAGAAAAATCT+TGG - chr6.4:12102259-12102278 MS.gene07934:CDS 30.0%
GATCATGATCTTCAAAACTT+GGG + chr6.4:12102912-12102931 None:intergenic 30.0%
GCCGATATTTATTGTTTGTT+CGG + chr6.4:12101527-12101546 None:intergenic 30.0%
GGTAATTATGCATATAACAC+TGG - chr6.4:12100823-12100842 MS.gene07934:intron 30.0%
GTTTACTTAATCCTAACAAC+AGG - chr6.4:12100956-12100975 MS.gene07934:intron 30.0%
TAAATTTCAGCTGCCTTTAT+TGG - chr6.4:12102022-12102041 MS.gene07934:CDS 30.0%
TAACAAAGAAGGTTTCAAGA+AGG - chr6.4:12100930-12100949 MS.gene07934:intron 30.0%
TAAGATATATAGATGGGATG+TGG - chr6.4:12101095-12101114 MS.gene07934:intron 30.0%
TAATAGTTAAACCATGACTC+TGG - chr6.4:12103864-12103883 MS.gene07934:CDS 30.0%
TGAATAAATGCAAAGCAAGA+AGG + chr6.4:12102709-12102728 None:intergenic 30.0%
TTACTTCTCGAAATGATCTA+AGG + chr6.4:12101161-12101180 None:intergenic 30.0%
TTTAAGTCTGAAAACCGAAA+AGG + chr6.4:12101288-12101307 None:intergenic 30.0%
! ATTTAGTTTACGCATTGTTG+AGG - chr6.4:12101856-12101875 MS.gene07934:CDS 30.0%
! GAGGAGTTACTTCTTTTTAA+AGG - chr6.4:12103303-12103322 MS.gene07934:intron 30.0%
! TATGATGATGCTGATAATGA+CGG - chr6.4:12102838-12102857 MS.gene07934:CDS 30.0%
! TTTGGTCTTTCTTTGAACTT+TGG + chr6.4:12103411-12103430 None:intergenic 30.0%
! TTTGTTTCTTCCGATTGATA+AGG + chr6.4:12103497-12103516 None:intergenic 30.0%
!! ATCATGATCGATTTGATGAA+AGG - chr6.4:12102923-12102942 MS.gene07934:CDS 30.0%
!! CCATGATTCTTTATTTCTAG+GGG + chr6.4:12100758-12100777 None:intergenic 30.0%
!! CGCTTTAAAATATATTGTCC+AGG + chr6.4:12103090-12103109 None:intergenic 30.0%
!! GCTCTTATAAATTCTAAAGC+TGG - chr6.4:12101201-12101220 MS.gene07934:intron 30.0%
!!! CTTTTTAAAGGTATTCGTAC+AGG - chr6.4:12103315-12103334 MS.gene07934:intron 30.0%
!!! TAGTGTTTTTTACTTCTCTC+AGG - chr6.4:12101555-12101574 MS.gene07934:intron 30.0%
AATCGTCTGTGGTTTCTTAT+TGG + chr6.4:12102152-12102171 None:intergenic 35.0%
AATTCGTCAAAAAGAGATGG+TGG - chr6.4:12101323-12101342 MS.gene07934:intron 35.0%
ACATTATGGTTCAGAGAATG+AGG - chr6.4:12102584-12102603 MS.gene07934:CDS 35.0%
AGTAAAAAGATGGTTTCGAG+AGG + chr6.4:12101392-12101411 None:intergenic 35.0%
ATGTCGTATGTTTGAGAACA+GGG - chr6.4:12102987-12103006 MS.gene07934:CDS 35.0%
ATGTCGTTAGAAGAAGAAGA+AGG + chr6.4:12103989-12104008 None:intergenic 35.0%
CATTATGGTTCAGAGAATGA+GGG - chr6.4:12102585-12102604 MS.gene07934:CDS 35.0%
CCCCTAGAAATAAAGAATCA+TGG - chr6.4:12100755-12100774 MS.gene07934:intron 35.0%
CGAAGTTTACCTTGTCAAAA+CGG + chr6.4:12104424-12104443 None:intergenic 35.0%
CGAGAAGTAAATGAAGTTCA+AGG - chr6.4:12101171-12101190 MS.gene07934:intron 35.0%
CGATCATGATCTTCAAAACT+TGG + chr6.4:12102913-12102932 None:intergenic 35.0%
CTTGCTTTGCATTTATTCAC+AGG - chr6.4:12102710-12102729 MS.gene07934:CDS 35.0%
GAAAGAAAATCCTGAGGAAA+GGG - chr6.4:12101020-12101039 MS.gene07934:intron 35.0%
GAAAGTGAAAGAAAATCCTG+AGG - chr6.4:12101014-12101033 MS.gene07934:intron 35.0%
GAAGTTTACCTTGTCAAAAC+GGG + chr6.4:12104423-12104442 None:intergenic 35.0%
GAATTTGAGCAACGAGTTAT+TGG - chr6.4:12104070-12104089 MS.gene07934:CDS 35.0%
GACAATTCGTCAAAAAGAGA+TGG - chr6.4:12101320-12101339 MS.gene07934:intron 35.0%
GAGAACGTCTTATGAAGTTA+TGG - chr6.4:12101233-12101252 MS.gene07934:intron 35.0%
GATTTCATCTTATCGACAGA+CGG + chr6.4:12103132-12103151 None:intergenic 35.0%
GCAAACATAAAGTGAAAGCA+CGG - chr6.4:12103933-12103952 MS.gene07934:CDS 35.0%
GGCAGAAATTCCTTATCAAT+CGG - chr6.4:12103484-12103503 MS.gene07934:intron 35.0%
GTAAAAAGATGGTTTCGAGA+GGG + chr6.4:12101391-12101410 None:intergenic 35.0%
TAAAGAATCGAACAAGTGAG+TGG + chr6.4:12102555-12102574 None:intergenic 35.0%
TAAGACCTATAGTCAATCCT+AGG + chr6.4:12101653-12101672 None:intergenic 35.0%
TCCAAAACATCAACATTCGA+AGG + chr6.4:12102865-12102884 None:intergenic 35.0%
TCTTATGAAGTTATGGGTCA+GGG - chr6.4:12101240-12101259 MS.gene07934:intron 35.0%
TCTTTCTTTGAACTTTGGTG+CGG + chr6.4:12103406-12103425 None:intergenic 35.0%
TGAAAGAAAATCCTGAGGAA+AGG - chr6.4:12101019-12101038 MS.gene07934:intron 35.0%
TGTTCTTGAAGCTGGAAAAA+AGG - chr6.4:12103278-12103297 MS.gene07934:intron 35.0%
TTCACAAACTCAATAACCTG+TGG + chr6.4:12100997-12101016 None:intergenic 35.0%
TTGAAGATCTTGGAGTTCTT+AGG - chr6.4:12103030-12103049 MS.gene07934:CDS 35.0%
! AGCTGGAATATATTTGAAGC+TGG - chr6.4:12101053-12101072 MS.gene07934:intron 35.0%
! AGTCGCTTCTTTGACTTAAT+TGG + chr6.4:12103435-12103454 None:intergenic 35.0%
! AGTTTTCCAGGTGTTTTTCA+TGG - chr6.4:12102214-12102233 MS.gene07934:CDS 35.0%
! ATGATGATGCTGATAATGAC+GGG - chr6.4:12102839-12102858 MS.gene07934:CDS 35.0%
! CAAACATAAAGTGAAAGCAC+GGG - chr6.4:12103934-12103953 MS.gene07934:CDS 35.0%
! CAGGTATTGTCTTCAAAGAA+TGG + chr6.4:12103071-12103090 None:intergenic 35.0%
! CATTCTTTGAAGACAATACC+TGG - chr6.4:12103069-12103088 MS.gene07934:CDS 35.0%
! GAATGCTCTGGTTTATGTAA+TGG + chr6.4:12101132-12101151 None:intergenic 35.0%
! GTTTTCCAGGTGTTTTTCAT+GGG - chr6.4:12102215-12102234 MS.gene07934:CDS 35.0%
! TCAATTCCGAATAGTTTTCC+AGG - chr6.4:12102202-12102221 MS.gene07934:CDS 35.0%
! TCTTTCAATGCTTTTCTTCG+TGG - chr6.4:12102514-12102533 MS.gene07934:CDS 35.0%
! TGAAGCTTTATCAGTGATTG+TGG - chr6.4:12103527-12103546 MS.gene07934:intron 35.0%
!! TATGCATTGGTCTTTAGCTT+GGG - chr6.4:12102444-12102463 MS.gene07934:CDS 35.0%
!!! CATCGAAAGAGTGTTTTGTT+TGG - chr6.4:12102055-12102074 MS.gene07934:CDS 35.0%
!!! GCTACTTTTGAAGACTTAGA+TGG + chr6.4:12103348-12103367 None:intergenic 35.0%
!!! GCTAGTATTTTTTGGTCAGA+TGG - chr6.4:12101444-12101463 MS.gene07934:intron 35.0%
!!! TACTCTGAAACCATTTTGCT+GGG + chr6.4:12104267-12104286 None:intergenic 35.0%
!!! TCGACATGTTTTGAAGATCT+TGG - chr6.4:12103020-12103039 MS.gene07934:CDS 35.0%
!!! TTACTCTGAAACCATTTTGC+TGG + chr6.4:12104268-12104287 None:intergenic 35.0%
!!! TTTTTCATGGGCTTTGTTCA+TGG - chr6.4:12102227-12102246 MS.gene07934:CDS 35.0%
AAACCATTTCCCCAGCAAAA+TGG - chr6.4:12104254-12104273 MS.gene07934:CDS 40.0%
AACTGCCTAGGATTGACTAT+AGG - chr6.4:12101645-12101664 MS.gene07934:intron 40.0%
AAGATCTTGGAGTTCTTAGG+TGG - chr6.4:12103033-12103052 MS.gene07934:CDS 40.0%
ACACTAGTTATCCAGAGTCA+TGG + chr6.4:12103878-12103897 None:intergenic 40.0%
ACAGACGATTTATACAGACC+AGG - chr6.4:12102162-12102181 MS.gene07934:CDS 40.0%
ACATCAACTTCATCTGAGAG+TGG - chr6.4:12100631-12100650 MS.gene07934:intron 40.0%
ATGAAATCGACCGTCAATGT+TGG - chr6.4:12103144-12103163 MS.gene07934:intron 40.0%
ATGAGGAGGACACAACAAAA+GGG - chr6.4:12102761-12102780 MS.gene07934:CDS 40.0%
CAAACACAAAGACAACACCA+AGG - chr6.4:12104121-12104140 MS.gene07934:CDS 40.0%
CATGTCGTATGTTTGAGAAC+AGG - chr6.4:12102986-12103005 MS.gene07934:CDS 40.0%
CGGAAGAAACAAAAGAGAGA+TGG - chr6.4:12103504-12103523 MS.gene07934:intron 40.0%
CTTACGCAAATCGTATGCAT+TGG - chr6.4:12102431-12102450 MS.gene07934:CDS 40.0%
GCATACGATTTGCGTAAGTT+TGG + chr6.4:12102429-12102448 None:intergenic 40.0%
GTCAGCATGAATCATTGCTA+GGG + chr6.4:12100719-12100738 None:intergenic 40.0%
GTCTTATGAAGTTATGGGTC+AGG - chr6.4:12101239-12101258 MS.gene07934:intron 40.0%
TATGAGGAGGACACAACAAA+AGG - chr6.4:12102760-12102779 MS.gene07934:CDS 40.0%
TCACACAAGACAAAATGCCT+AGG + chr6.4:12101790-12101809 None:intergenic 40.0%
TCAGCATGAATCATTGCTAG+GGG + chr6.4:12100718-12100737 None:intergenic 40.0%
TCTTCAAAAGTAGCTGCTGT+TGG - chr6.4:12103354-12103373 MS.gene07934:intron 40.0%
TGGTCTGTATAAATCGTCTG+TGG + chr6.4:12102163-12102182 None:intergenic 40.0%
TGTCAGCATGAATCATTGCT+AGG + chr6.4:12100720-12100739 None:intergenic 40.0%
TGTCGTATGTTTGAGAACAG+GGG - chr6.4:12102988-12103007 MS.gene07934:CDS 40.0%
TTGATATCGTTGTGCTTGAC+TGG + chr6.4:12103181-12103200 None:intergenic 40.0%
TTTGAAGACTTAGATGGCGT+CGG + chr6.4:12103342-12103361 None:intergenic 40.0%
! AAACCATTTTGCTGGGGAAA+TGG + chr6.4:12104260-12104279 None:intergenic 40.0%
! AACACCAAGGTCAACTGTTT+TGG - chr6.4:12104134-12104153 MS.gene07934:CDS 40.0%
! ACACCAAGGTCAACTGTTTT+GGG - chr6.4:12104135-12104154 MS.gene07934:CDS 40.0%
! AGGGGTGTACTTGTTTACAA+CGG + chr6.4:12102689-12102708 None:intergenic 40.0%
! ATTTTCTCGCTTCTGCCATT+TGG - chr6.4:12101716-12101735 MS.gene07934:CDS 40.0%
! CAGTACATTTTGAACTGCCT+AGG - chr6.4:12101633-12101652 MS.gene07934:intron 40.0%
! GCACAGAGAATCTTCCTTTT+CGG - chr6.4:12101271-12101290 MS.gene07934:intron 40.0%
! GCCTTCGAATGTTGATGTTT+TGG - chr6.4:12102861-12102880 MS.gene07934:CDS 40.0%
! GTCAAGTCACATTTTACAGC+TGG - chr6.4:12102466-12102485 MS.gene07934:CDS 40.0%
! TCATGCTGAGTTGGACTTTA+AGG - chr6.4:12102612-12102631 MS.gene07934:CDS 40.0%
!! GTATGCATTGGTCTTTAGCT+TGG - chr6.4:12102443-12102462 MS.gene07934:CDS 40.0%
!! TTCAGAGCGTTGATTTGCTT+TGG + chr6.4:12104236-12104255 None:intergenic 40.0%
!!! ACTCTGAAACCATTTTGCTG+GGG + chr6.4:12104266-12104285 None:intergenic 40.0%
!!! AGACAGCAGCTACTTTTGAT+TGG - chr6.4:12102098-12102117 MS.gene07934:CDS 40.0%
AACACAATAACGCACTAGCC+TGG + chr6.4:12102183-12102202 None:intergenic 45.0%
AATCGAACAAGTGAGTGGTC+TGG + chr6.4:12102550-12102569 None:intergenic 45.0%
CAAAGCCCATGAAAAACACC+TGG + chr6.4:12102223-12102242 None:intergenic 45.0%
CTAAGGTAACACGAATGCTC+TGG + chr6.4:12101144-12101163 None:intergenic 45.0%
CTTTGTGTGTACTCGCTTCA+AGG - chr6.4:12104389-12104408 MS.gene07934:CDS 45.0%
GAAAATCCTGAGGAAAGGGT+TGG - chr6.4:12101024-12101043 MS.gene07934:intron 45.0%
GACAAGGTAAACTTCGCTCA+TGG - chr6.4:12104428-12104447 MS.gene07934:CDS 45.0%
GAGCATTTGTTCTAGCAGCA+TGG + chr6.4:12104481-12104500 None:intergenic 45.0%
GAGGGATAATCATGCTGAGT+TGG - chr6.4:12102603-12102622 MS.gene07934:CDS 45.0%
GTCTTCAGTGCCAACATTGA+CGG + chr6.4:12103157-12103176 None:intergenic 45.0%
TCTCCCAAAACAGTTGACCT+TGG + chr6.4:12104141-12104160 None:intergenic 45.0%
TGAAGCTGGAAAAAAGGCAG+AGG - chr6.4:12103284-12103303 MS.gene07934:intron 45.0%
TGAGCAACGAGTTATTGGTG+CGG - chr6.4:12104075-12104094 MS.gene07934:CDS 45.0%
TTACAACCAACCCTTTCCTC+AGG + chr6.4:12101033-12101052 None:intergenic 45.0%
TTGAAGACTTAGATGGCGTC+GGG + chr6.4:12103341-12103360 None:intergenic 45.0%
! CGTCAAAAAGAGATGGTGGT+TGG - chr6.4:12101327-12101346 MS.gene07934:intron 45.0%
! CTGTTGGTGAAACATCTGCT+GGG - chr6.4:12103370-12103389 MS.gene07934:intron 45.0%
! TCTGTTGTTGGCCTGTTGTT+AGG + chr6.4:12100970-12100989 None:intergenic 45.0%
! TCTTTGAACTTTGGTGCGGT+GGG + chr6.4:12103402-12103421 None:intergenic 45.0%
! TGTTGGTGAAACATCTGCTG+GGG - chr6.4:12103371-12103390 MS.gene07934:intron 45.0%
! TTCTTTGAACTTTGGTGCGG+TGG + chr6.4:12103403-12103422 None:intergenic 45.0%
!! CTGAGTTTCCCGTTTTGACA+AGG - chr6.4:12104412-12104431 MS.gene07934:CDS 45.0%
!! GAAAGGGTTGGTTGTAAAGC+TGG - chr6.4:12101036-12101055 MS.gene07934:intron 45.0%
!! TCACTGATTCATGCTGAGAG+TGG - chr6.4:12100676-12100695 MS.gene07934:intron 45.0%
ACCACATTACCAGTGTGCAC+TGG - chr6.4:12104175-12104194 MS.gene07934:CDS 50.0%
ATCCCAACAGTCAGCTGATG+CGG - chr6.4:12102662-12102681 MS.gene07934:CDS 50.0%
GAAGGCCTACCTCAGACTTT+AGG - chr6.4:12102395-12102414 MS.gene07934:CDS 50.0%
GAAGTTATGGGTCAGGGAGT+TGG - chr6.4:12101246-12101265 MS.gene07934:intron 50.0%
GACAAGCCACCTAAAGTCTG+AGG + chr6.4:12102407-12102426 None:intergenic 50.0%
! ACCAGTGCACACTGGTAATG+TGG + chr6.4:12104179-12104198 None:intergenic 50.0%
! ACCTGTGGACTGTCTGTTGT+TGG + chr6.4:12100982-12101001 None:intergenic 50.0%
! AGCCACCTAAAGTCTGAGGT+AGG + chr6.4:12102403-12102422 None:intergenic 50.0%
! GCTGTTGGTGAAACATCTGC+TGG - chr6.4:12103369-12103388 MS.gene07934:intron 50.0%
!! TGGGCTTTGTTCATGGCACA+TGG - chr6.4:12102234-12102253 MS.gene07934:CDS 50.0%
CTCGACGGTGTTCTTGAAGC+TGG - chr6.4:12103270-12103289 MS.gene07934:intron 55.0%
GACCGCATCAGCTGACTGTT+GGG + chr6.4:12102667-12102686 None:intergenic 55.0%
GCCAACAACAGACAGTCCAC+AGG - chr6.4:12100978-12100997 MS.gene07934:intron 55.0%
GGCCTACCTCAGACTTTAGG+TGG - chr6.4:12102398-12102417 MS.gene07934:CDS 55.0%
GGTAACTCACCAGTGCACAC+TGG + chr6.4:12104187-12104206 None:intergenic 55.0%
GTTATGGGTCAGGGAGTTGG+AGG - chr6.4:12101249-12101268 MS.gene07934:intron 55.0%
GGACCGCATCAGCTGACTGT+TGG + chr6.4:12102668-12102687 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr6.4 gene 12100622 12104503 12100622 ID=MS.gene07934
chr6.4 mRNA 12100622 12104503 12100622 ID=MS.gene07934.t1;Parent=MS.gene07934
chr6.4 exon 12103573 12104503 12103573 ID=MS.gene07934.t1.exon1;Parent=MS.gene07934.t1
chr6.4 CDS 12103573 12104503 12103573 ID=cds.MS.gene07934.t1;Parent=MS.gene07934.t1
chr6.4 exon 12101666 12103093 12101666 ID=MS.gene07934.t1.exon2;Parent=MS.gene07934.t1
chr6.4 CDS 12101666 12103093 12101666 ID=cds.MS.gene07934.t1;Parent=MS.gene07934.t1
chr6.4 exon 12100622 12100635 12100622 ID=MS.gene07934.t1.exon3;Parent=MS.gene07934.t1
chr6.4 CDS 12100622 12100635 12100622 ID=cds.MS.gene07934.t1;Parent=MS.gene07934.t1
Gene Sequence

>MS.gene07934

ATGGATTTGACATCAACTTCATCTGAGAGTGGACAACTGAGTGTTGAAACTTCATCACTGATTCATGCTGAGAGTGGACAATTGTGTGTTACTCCCCTAGCAATGATTCATGCTGACAGTTCTCAATGTTACTCCCCTAGAAATAAAGAATCATGGAAGTCTTTAGTCTTTCAATCTATTAAAGTGATTGAAGATTTTTATGGTAATTATGCATATAACACTGGATTTTCTATTAGGACTATGTTAAAGTCGAAGAATAATTCACAAAACAAGAAATCTGATAAGGTACATTATTTGCGTTATGTTTGTAACAAAGAAGGTTTCAAGAAGGGAAGTTTACTTAATCCTAACAACAGGCCAACAACAGACAGTCCACAGGTTATTGAGTTTGTGAAAGTGAAAGAAAATCCTGAGGAAAGGGTTGGTTGTAAAGCTGGAATATATTTGAAGCTGGATGAAGTTTTGAATGTGTATAAGATATATAGATGGGATGTGGATCACTGTCATCCATTACATAAACCAGAGCATTCGTGTTACCTTAGATCATTTCGAGAAGTAAATGAAGTTCAAGGACAACTAGCTCTTATAAATTCTAAAGCTGGAATGTCGATGAGAACGTCTTATGAAGTTATGGGTCAGGGAGTTGGAGGCACAGAGAATCTTCCTTTTCGGTTTTCAGACTTAAAGAACTATCTAATGACAATTCGTCAAAAAGAGATGGTGGTTGGTGAAGCAACTGTAATTCAAGAATTCTTTAGAAATGAAGCCCTCTCGAAACCATCTTTTTACTATGATATTCAAGTTGATGCTGCAGAAGACATAGCTAGTATTTTTTGGTCAGATGGAATTATGCAACTAGATTATTCTCTATTCGGCGATGTCATCAGTTTTGATACAACTTACCGAACAAACAATAAATATCGGCCATTAGGTTAGTGTTTTTTACTTCTCTCAGGTTTTAAATTATTGTTTAATTTCATTAAGTTGTTCTGGCATGTGTATTATAAGTAGCAGTACATTTTGAACTGCCTAGGATTGACTATAGGTCTTACTTATTTGAACTACACGGGTTTAACCATGTTGTTTGTTTAGGGATTTTCTCGCTTCTGCCATTTGGTTTGATACAAACTTAAATGATGTTGATTGGAATTTATATTTTGAACTGCCTAGGCATTTTGTCTTGTGTGATCGAACTTTAGTACATACTTATTAGAATACTTAGGTGTGTTTTATCATTTAGTTTACGCATTGTTGAGGCATGATTTCTTATAATTTGTGATTACAGGCTAGCAATGACTTAAATTAGTGATTTCTCTAATTATTTACTGTAAGCTATATATATATATATATATATATATATATATATATATATGTTGTATTTTGTTCTGATATGGATAATTTAAATTTCAGCTGCCTTTATTGGTTTTGACAATCATCGAAAGAGTGTTTTGTTTGGTGTTGCGCTATTGTACGATGAGACAGCAGCTACTTTTGATTGGTTGTTTAAAACATTCTTGAAGTGTATGTCCAATAAGAAACCACAGACGATTTATACAGACCAGGCTAGTGCGTTATTGTGTTCAATTCCGAATAGTTTTCCAGGTGTTTTTCATGGGCTTTGTTCATGGCACATGGCAGAGAATGCAAAGAAAAATCTTGGCTCTCGTGCAAACAGTGCATTTTTTGATGAGTTAAATAATTTGGTTTCAAATGTAGATGATGAATCAGATTTTGACTATAATTGGGATCAGATGATGATAAATTGTTTTAATGGAAGGCCTACCTCAGACTTTAGGTGGCTTGTCCAAACTTACGCAAATCGTATGCATTGGTCTTTAGCTTGGGTCAAGTCACATTTTACAGCTGGTCTGAAAACGACTCAGTTAAGTGAGTCTTTCAATGCTTTTCTTCGTGGATTTCTACAGCCAGACCACTCACTTGTTCGATTCTTTAGTCATTTCAACATTATGGTTCAGAGAATGAGGGATAATCATGCTGAGTTGGACTTTAAGGCTGCAAACACTAGAACAAAAAATAATTATCCCAACAGTCAGCTGATGCGGTCCGTTGTAAACAAGTACACCCCTTCTTGCTTTGCATTTATTCACAGGCAGTATGACCTTTCCTTCAAATACTATTATGAGGAGGACACAACAAAAGGGTCTGCCTTTGAGAAGTTTTTCAAAGTTTTCACAATTGATAAGGTTGATGATAATTATGATGATGCTGATAATGACGGGCCTTCGAATGTTGATGTTTTGGATGCAGAACTTCAAGAAAACGTTTCCCCAAGTTTTGAAGATCATGATCGATTTGATGAAAGGCTTGTCACAGTTGACATTAGAAGCAAAAGTTTTAGTTGTTCATGTCGTATGTTTGAGAACAGGGGCTTCTTATGTCGACATGTTTTGAAGATCTTGGAGTTCTTAGGTGGACATGTGCAATACCATTCTTTGAAGACAATACCTGGACAATATATTTTAAAGCGTTGGACTAGAGATGTGCGTCCGTCTGTCGATAAGATGAAATCGACCGTCAATGTTGGCACTGAAGACACCAGTCAAGCACAACGATATCAACAAATTTGTGCTGTTACAGTTCAGCTTTCTACACGTTTTTGTGCAGATCCAGAGTCATCTAAAATTTTTCTCGACGGTGTTCTTGAAGCTGGAAAAAAGGCAGAGGAGTTACTTCTTTTTAAAGGTATTCGTACAGGCCCGACGCCATCTAAGTCTTCAAAAGTAGCTGCTGTTGGTGAAACATCTGCTGGGGTGAAGCCCACCGCACCAAAGTTCAAAGAAAGACCAAATCCAATTAAGTCAAAGAAGCGACTTAAAAGTGATTATGAAAAAGCTAGAAAAAGGCAGAAATTCCTTATCAATCGGAAGAAACAAAAGAGAGATGGTGAAGCTTTATCAGTGATTGTGGTCCCTGATTGATTGTTTTTATAAGTTTGGTTTTTTAGGTTATAAGTTTGTACTAGATTTTATTTTGATTATTTTGATATGATTTATTGGAAATTATACATTTTCACATTCTTTAATGTTATGTATTGATGATTATATTTTGGATATGATCTAAATGAAATTATACATTTCGCATTATTTGTTTTTATGTATTGATGATTATAGTTTGTTACAAAACCATTAGATAATTATTTTGGTTTCATGTAATACACTAACAAAACCATTAAATACTACTTATGGTTTCAGTAATAGTCATTATTTAAAACCATTTATCAATAATAGTTAAACCATGACTCTGGATAACTAGTGTCACTTTTTCGTAAAAATTAGAGGGTAACACAAAAAGCAAACATAAAGTGAAAGCACGGGACATGCGACGTTACAACCCCAACATTAAACCTTCTTCTTCTTCTAACGACATCGTTTTGCTGAAGTTAGAATTTGAGTTTGAGCTTGAATTTGAGTTTAATGTGAATGGAATTGAATTTGAGCAACGAGTTATTGGTGCGGTGTCTTTGTCTTTGTTACTCTCACAAACACAAAGACAACACCAAGGTCAACTGTTTTGGGAGAAAGATAGAACAAAAACCACATTACCAGTGTGCACTGGTGAGTTACCAAACAAAGAAATTGTTAAAAACAGTTCCAAAGCAAATCAACGCTCTGAAACCATTTCCCCAGCAAAATGGTTTCAGAGTAAAACTTGCTAAAACCATTTACACAGCATATTGGTTTTCAGAGTAAAATGGTTTTCTATATGATTTTTACACAACAAAATATATCTGTTGAAGAGATACAAAACTTTGTGTGTACTCGCTTCAAGGCTGAGTTTCCCGTTTTGACAAGGTAAACTTCGCTCATGGTTTTATTCTATGTATAGTCATTAATTTCCATGCTGCTAGAACAAATGCTCTGA
Protein sequence

>MS.gene07934.t1

MDLTSTSSESGQLSVETSSLIHAESGQLCVTPLAMIHADSSQCYSPRNKESWKSLVFQSIKVIEDFYGNYAYNTGFSIRTMLKSKNNSQNKKSDKVHYLRYVCNKEGFKKGSLLNPNNRPTTDSPQVIEFVKVKENPEERVGCKAGIYLKLDEVLNVYKIYRWDVDHCHPLHKPEHSCYLRSFREVNEVQGQLALINSKAGMSMRTSYEVMGQGVGGTENLPFRFSDLKNYLMTIRQKEMVVGEATVIQEFFRNEALSKPSFYYDIQVDAAEDIASIFWSDGIMQLDYSLFGDVISFDTTYRTNNKYRPLAAFIGFDNHRKSVLFGVALLYDETAATFDWLFKTFLKCMSNKKPQTIYTDQASALLCSIPNSFPGVFHGLCSWHMAENAKKNLGSRANSAFFDELNNLVSNVDDESDFDYNWDQMMINCFNGRPTSDFRWLVQTYANRMHWSLAWVKSHFTAGLKTTQLSESFNAFLRGFLQPDHSLVRFFSHFNIMVQRMRDNHAELDFKAANTRTKNNYPNSQLMRSVVNKYTPSCFAFIHRQYDLSFKYYYEEDTTKGSAFEKFFKVFTIDKVDDNYDDADNDGPSNVDVLDAELQENVSPSFEDHDRFDERLVTVDIRSKSFSCSCRMFENRGFLCRHVLKILEFLGGHVQYHSLKTIPGQYILKRWTRDVRPSVDKMKSTVNVGTEDTSQAQRYQQICAVTVQLSTRFCADPESSKIFLDGVLEAGKKAEELLLFKGIRTGPTPSKSSKVAAVGETSAGVKPTAPKFKERPNPIKSKKRLKKQML