AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene08058

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08058.t1 MTR_3g461490 98.769 325 4 0 1 325 1 325 0.0 678
MS.gene08058.t1 MTR_6g009430 56.000 175 72 1 1 175 1 170 1.68e-65 209
MS.gene08058.t1 MTR_4g091490 70.543 129 37 1 1 128 1 129 1.04e-64 208
MS.gene08058.t1 MTR_3g074520 52.459 183 75 1 1 171 1 183 2.21e-63 204
MS.gene08058.t1 MTR_2g011660 68.992 129 39 1 1 128 1 129 3.00e-63 204
MS.gene08058.t1 MTR_7g011170 68.750 128 40 0 1 128 1 128 6.56e-62 199
MS.gene08058.t1 MTR_6g012690 67.969 128 41 0 1 128 1 128 8.97e-62 201
MS.gene08058.t1 MTR_4g082290 68.750 128 40 0 1 128 1 128 1.39e-60 199
MS.gene08058.t1 MTR_2g089620 65.672 134 45 1 1 133 1 134 2.15e-60 196
MS.gene08058.t1 MTR_4g478180 61.111 144 53 1 1 141 2 145 2.74e-60 197
MS.gene08058.t1 MTR_5g029840 50.251 199 80 4 1 182 1 197 3.74e-60 196
MS.gene08058.t1 MTR_4g073420 57.432 148 59 1 1 148 1 144 1.94e-59 192
MS.gene08058.t1 MTR_4g082230 67.188 128 42 0 1 128 1 128 3.33e-59 195
MS.gene08058.t1 MTR_5g078140 59.864 147 59 0 1 147 1 147 2.01e-58 191
MS.gene08058.t1 MTR_3g097450 54.902 153 67 1 1 153 1 151 4.12e-58 189
MS.gene08058.t1 MTR_4g102380 63.846 130 47 0 1 130 1 130 5.01e-58 188
MS.gene08058.t1 MTR_7g110830 58.442 154 61 1 1 151 1 154 1.20e-57 190
MS.gene08058.t1 MTR_3g065440 61.871 139 53 0 1 139 1 139 2.52e-57 187
MS.gene08058.t1 MTR_1g085040 64.394 132 47 0 1 132 1 132 4.60e-57 189
MS.gene08058.t1 MTR_1g085640 64.394 132 47 0 1 132 1 132 1.60e-56 188
MS.gene08058.t1 MTR_7g076740 58.519 135 55 1 1 134 1 135 6.71e-56 184
MS.gene08058.t1 MTR_4g105130 63.077 130 48 0 1 130 1 130 1.91e-55 184
MS.gene08058.t1 MTR_3g077110 63.566 129 47 0 1 129 1 129 5.61e-55 183
MS.gene08058.t1 MTR_4g057635 64.062 128 45 1 1 127 1 128 1.89e-54 181
MS.gene08058.t1 MTR_8g095390 59.091 132 54 0 1 132 1 132 2.12e-54 180
MS.gene08058.t1 MTR_1g017140 68.067 119 37 1 1 118 1 119 5.44e-54 180
MS.gene08058.t1 MTR_2g064160 62.400 125 47 0 6 130 5 129 5.54e-54 179
MS.gene08058.t1 MTR_1g100653 65.517 116 40 0 1 116 1 116 6.38e-54 178
MS.gene08058.t1 MTR_1g017000 57.718 149 57 3 1 147 1 145 9.71e-54 177
MS.gene08058.t1 MTR_5g007370 60.938 128 50 0 1 128 1 128 1.14e-53 178
MS.gene08058.t1 MTR_7g111290 65.385 130 45 0 1 130 1 130 1.85e-53 180
MS.gene08058.t1 MTR_5g014990 66.387 119 39 1 1 118 1 119 3.41e-53 177
MS.gene08058.t1 MTR_1g112760 61.417 127 49 0 3 129 4 130 3.51e-53 174
MS.gene08058.t1 MTR_7g102110 65.000 120 41 1 1 119 1 120 3.62e-53 176
MS.gene08058.t1 MTR_5g079670 60.800 125 49 0 3 127 2 126 3.77e-53 174
MS.gene08058.t1 MTR_3g103570 65.546 119 40 1 1 118 1 119 6.70e-53 177
MS.gene08058.t1 MTR_1g076150 66.379 116 39 0 1 116 1 116 1.52e-52 174
MS.gene08058.t1 MTR_1g043050 65.517 116 40 0 1 116 1 116 2.20e-52 173
MS.gene08058.t1 MTR_8g031360 55.152 165 62 6 1 153 1 165 2.74e-52 174
MS.gene08058.t1 MTR_1g043080 64.655 116 41 0 1 116 1 116 3.63e-52 172
MS.gene08058.t1 MTR_3g083540 61.600 125 48 0 5 129 34 158 7.19e-52 173
MS.gene08058.t1 MTR_0140s0030 64.655 116 41 0 1 116 2 117 5.41e-51 172
MS.gene08058.t1 MTR_0489s0020 64.655 116 41 0 1 116 2 117 5.41e-51 172
MS.gene08058.t1 MTR_4g121460 62.931 116 43 0 1 116 1 116 8.81e-51 172
MS.gene08058.t1 MTR_2g089450 61.207 116 45 0 1 116 1 116 1.04e-50 169
MS.gene08058.t1 MTR_2g095520 66.667 111 36 1 1 110 1 111 1.27e-50 171
MS.gene08058.t1 MTR_4g125520 61.345 119 46 0 1 119 1 119 2.52e-50 169
MS.gene08058.t1 MTR_2g034790 62.069 116 44 0 1 116 1 116 3.11e-50 170
MS.gene08058.t1 MTR_5g042030 60.504 119 47 0 12 130 7 125 3.74e-50 168
MS.gene08058.t1 MTR_4g097570 68.182 110 34 1 1 109 1 110 6.12e-50 168
MS.gene08058.t1 MTR_7g010210 62.069 116 44 0 1 116 1 116 6.58e-50 167
MS.gene08058.t1 MTR_7g010210 62.069 116 44 0 1 116 1 116 6.93e-50 169
MS.gene08058.t1 MTR_3g045430 58.088 136 56 1 1 135 1 136 1.40e-49 167
MS.gene08058.t1 MTR_7g117730 61.207 116 45 0 1 116 1 116 5.24e-49 164
MS.gene08058.t1 MTR_7g087130 60.000 125 48 1 1 123 1 125 5.62e-49 167
MS.gene08058.t1 MTR_3g039990 62.931 116 43 0 1 116 2 117 6.57e-49 166
MS.gene08058.t1 MTR_7g115650 62.069 116 44 0 1 116 1 116 1.05e-48 162
MS.gene08058.t1 MTR_8g017440 54.110 146 61 1 1 140 1 146 1.10e-48 166
MS.gene08058.t1 MTR_7g096930 62.069 116 44 0 1 116 1 116 2.10e-48 164
MS.gene08058.t1 MTR_4g097570 67.568 111 34 2 1 109 1 111 2.45e-48 164
MS.gene08058.t1 MTR_2g067420 64.220 109 39 0 2 110 4 112 5.12e-48 164
MS.gene08058.t1 MTR_2g099740 57.576 132 56 0 1 132 1 132 8.54e-48 166
MS.gene08058.t1 MTR_6g090405 64.655 116 40 1 1 115 1 116 1.01e-47 161
MS.gene08058.t1 MTR_6g012180 62.727 110 41 0 1 110 1 110 1.41e-47 162
MS.gene08058.t1 MTR_8g098860 60.345 116 46 0 1 116 1 116 1.81e-47 162
MS.gene08058.t1 MTR_0008s0390 59.483 116 46 1 1 115 1 116 3.44e-47 160
MS.gene08058.t1 MTR_8g027345 58.621 116 48 0 1 116 1 116 8.30e-47 160
MS.gene08058.t1 MTR_0251s0050 58.120 117 48 1 1 116 1 117 1.00e-46 159
MS.gene08058.t1 MTR_8g017540 60.976 123 48 0 1 123 47 169 1.66e-46 162
MS.gene08058.t1 MTR_0008s0470 57.759 116 48 1 1 115 1 116 2.43e-46 159
MS.gene08058.t1 MTR_4g128670 63.063 111 40 1 1 110 1 111 3.20e-46 160
MS.gene08058.t1 MTR_4g485530 58.400 125 51 1 3 126 2 126 4.18e-46 155
MS.gene08058.t1 MTR_8g017500 60.169 118 47 0 6 123 6 123 2.53e-45 157
MS.gene08058.t1 MTR_0063s0090 58.407 113 47 0 1 113 1 113 4.12e-45 153
MS.gene08058.t1 MTR_2g089420 56.897 116 49 1 1 116 1 115 5.40e-45 159
MS.gene08058.t1 MTR_7g109320 62.069 116 44 0 1 116 1 116 5.66e-45 157
MS.gene08058.t1 MTR_5g010020 60.000 110 44 0 1 110 1 110 1.61e-44 155
MS.gene08058.t1 MTR_8g017390 62.393 117 43 1 1 116 1 117 2.75e-44 158
MS.gene08058.t1 MTR_8g017340 58.462 130 52 2 1 129 1 129 5.57e-44 157
MS.gene08058.t1 MTR_4g065017 59.459 111 45 0 12 122 17 127 1.62e-43 152
MS.gene08058.t1 MTR_4g100720 56.522 115 50 0 9 123 10 124 3.39e-43 147
MS.gene08058.t1 MTR_2g097910 58.333 108 45 0 12 119 20 127 5.63e-43 150
MS.gene08058.t1 MTR_8g017350 57.692 130 53 2 1 129 1 129 8.22e-43 156
MS.gene08058.t1 MTR_3g028740 62.037 108 41 0 9 116 19 126 2.39e-42 150
MS.gene08058.t1 MTR_0008s0280 55.263 114 51 0 1 114 1 114 3.85e-42 146
MS.gene08058.t1 MTR_6g055910 59.633 109 44 0 7 115 9 117 1.06e-41 146
MS.gene08058.t1 MTR_8g020490 59.048 105 43 0 12 116 8 112 2.15e-41 145
MS.gene08058.t1 MTR_1g100667 50.365 137 67 1 13 149 14 149 2.58e-41 145
MS.gene08058.t1 MTR_3g052450 56.481 108 47 0 8 115 36 143 4.31e-39 145
MS.gene08058.t1 MTR_3g052430 58.095 105 44 0 11 115 40 144 5.97e-39 144
MS.gene08058.t1 MTR_1g110460 52.174 115 55 0 8 122 22 136 1.11e-38 139
MS.gene08058.t1 MTR_0247s0040 58.824 102 42 0 12 113 7 108 2.54e-38 134
MS.gene08058.t1 MTR_0197s0010 58.491 106 44 0 17 122 6 111 4.59e-38 135
MS.gene08058.t1 MTR_5g079120 55.556 108 48 0 9 116 58 165 5.23e-38 137
MS.gene08058.t1 MTR_0193s0090 56.190 105 46 0 12 116 7 111 4.24e-37 132
MS.gene08058.t1 MTR_1g073170 54.545 110 50 0 6 115 14 123 4.59e-37 133
MS.gene08058.t1 MTR_5g079220 53.636 110 51 0 7 116 16 125 5.28e-37 134
MS.gene08058.t1 MTR_7g017260 57.944 107 43 1 12 116 25 131 7.23e-37 133
MS.gene08058.t1 MTR_5g078930 56.757 111 47 1 6 115 2 112 7.35e-37 132
MS.gene08058.t1 MTR_5g088080 50.877 114 54 2 11 123 11 123 9.13e-37 133
MS.gene08058.t1 MTR_5g088150 50.877 114 54 2 11 123 11 123 9.13e-37 133
MS.gene08058.t1 MTR_5g488210 50.877 114 54 2 11 123 11 123 9.13e-37 133
MS.gene08058.t1 MTR_5g488170 50.877 114 54 2 11 123 11 123 9.90e-37 132
MS.gene08058.t1 MTR_5g079290 55.238 105 47 0 12 116 17 121 1.26e-36 132
MS.gene08058.t1 MTR_3g011610 53.982 113 51 1 12 123 37 149 1.27e-36 138
MS.gene08058.t1 MTR_5g088640 50.435 115 55 2 11 124 11 124 1.39e-36 132
MS.gene08058.t1 MTR_5g078800 57.143 105 45 0 12 116 7 111 1.68e-36 132
MS.gene08058.t1 MTR_1g062940 54.717 106 48 0 11 116 5 110 1.71e-36 131
MS.gene08058.t1 MTR_7g111290 72.414 87 24 0 44 130 2 88 2.50e-36 134
MS.gene08058.t1 MTR_7g035075 53.774 106 49 0 11 116 13 118 2.59e-36 130
MS.gene08058.t1 MTR_5g062790 51.304 115 54 2 11 124 8 121 3.69e-36 132
MS.gene08058.t1 MTR_4g063100 54.369 103 47 0 13 115 8 110 7.71e-36 130
MS.gene08058.t1 MTR_2g088170 56.731 104 45 0 12 115 29 132 9.31e-36 134
MS.gene08058.t1 MTR_6g006030 50.847 118 56 1 1 116 1 118 1.91e-35 128
MS.gene08058.t1 MTR_8g042410 53.846 104 48 0 12 115 37 140 3.17e-35 134
MS.gene08058.t1 MTR_1g086510 48.800 125 63 1 12 136 21 144 3.47e-35 129
MS.gene08058.t1 MTR_5g078950 55.882 102 45 0 12 113 7 108 3.94e-35 129
MS.gene08058.t1 MTR_2g096380 52.336 107 51 0 9 115 3 109 4.14e-35 128
MS.gene08058.t1 MTR_1g045610 52.727 110 52 0 6 115 15 124 4.65e-35 128
MS.gene08058.t1 MTR_8g060940 55.446 101 45 0 12 112 7 107 5.34e-35 127
MS.gene08058.t1 MTR_1g086530 50.450 111 55 0 12 122 33 143 5.42e-35 129
MS.gene08058.t1 MTR_5g078860 54.286 105 48 0 12 116 7 111 5.73e-35 129
MS.gene08058.t1 MTR_5g078910 54.286 105 48 0 12 116 7 111 1.16e-34 128
MS.gene08058.t1 MTR_0001s0360 54.286 105 48 0 12 116 7 111 1.99e-34 126
MS.gene08058.t1 MTR_5g016510 48.276 116 59 1 14 129 5 119 6.04e-33 124
MS.gene08058.t1 MTR_2g033170 49.593 123 61 1 11 133 23 144 1.44e-32 123
MS.gene08058.t1 MTR_1g021230 51.923 104 50 0 12 115 57 160 1.54e-32 125
MS.gene08058.t1 MTR_5g088610 49.565 115 56 2 11 124 8 121 8.55e-32 122
MS.gene08058.t1 MTR_4g019370 42.254 142 77 2 14 155 38 174 1.45e-31 121
MS.gene08058.t1 MTR_3g101290 44.444 144 59 4 14 143 37 173 1.77e-31 118
MS.gene08058.t1 MTR_4g094982 50.962 104 50 1 14 117 5 107 1.33e-30 117
MS.gene08058.t1 MTR_4g123040 46.825 126 66 1 11 136 23 147 1.63e-30 117
MS.gene08058.t1 MTR_8g006470 48.148 108 55 1 8 114 6 113 2.36e-30 116
MS.gene08058.t1 MTR_1g083630 46.281 121 64 1 12 131 12 132 5.35e-30 120
MS.gene08058.t1 MTR_5g007300 56.818 88 38 0 1 88 53 140 6.85e-30 111
MS.gene08058.t1 MTR_4g029540 48.148 108 55 1 8 114 6 113 4.96e-29 113
MS.gene08058.t1 MTR_6g015455 47.748 111 57 1 14 124 5 114 8.89e-29 117
MS.gene08058.t1 MTR_6g055910 66.197 71 24 0 45 115 18 88 2.69e-27 107
MS.gene08058.t1 MTR_5g049190 33.696 184 92 4 9 163 14 196 3.51e-27 107
MS.gene08058.t1 MTR_4g082040 48.039 102 52 1 14 115 105 205 3.62e-27 110
MS.gene08058.t1 MTR_3g461510 59.341 91 37 0 216 306 1 91 5.96e-27 102
MS.gene08058.t1 MTR_3g463400 42.222 135 74 3 14 145 133 266 8.72e-27 110
MS.gene08058.t1 MTR_4g128190 46.364 110 42 3 12 117 11 107 3.54e-26 104
MS.gene08058.t1 MTR_5g070020 47.115 104 54 1 14 117 122 224 6.06e-26 106
MS.gene08058.t1 MTR_4g063100 61.111 72 28 0 44 115 10 81 6.14e-26 103
MS.gene08058.t1 MTR_5g041570 46.078 102 54 1 14 115 134 234 6.70e-26 107
MS.gene08058.t1 MTR_1g085880 51.429 105 49 2 12 114 11 115 9.02e-26 102
MS.gene08058.t1 MTR_3g077650 44.545 110 60 1 8 117 175 283 1.05e-25 107
MS.gene08058.t1 MTR_7g061330 48.544 103 52 1 14 116 113 214 1.34e-25 107
MS.gene08058.t1 MTR_7g461410 48.544 103 52 1 14 116 113 214 1.34e-25 107
MS.gene08058.t1 MTR_4g105660 45.794 107 55 2 12 117 178 282 1.77e-25 105
MS.gene08058.t1 MTR_7g061330 48.544 103 52 1 14 116 77 178 1.88e-25 106
MS.gene08058.t1 MTR_6g074860 45.545 101 54 1 14 114 4 103 2.24e-25 102
MS.gene08058.t1 MTR_5g082910 37.037 162 94 5 10 166 16 174 3.52e-25 102
MS.gene08058.t1 MTR_1g085770 51.429 105 49 2 12 114 11 115 4.27e-25 103
MS.gene08058.t1 MTR_2g096380 58.333 72 30 0 44 115 19 90 3.53e-24 98.6
MS.gene08058.t1 MTR_7g037260 44.248 113 57 2 11 118 142 253 5.28e-24 100
MS.gene08058.t1 MTR_7g086960 46.078 102 54 1 14 115 89 189 7.22e-24 100
MS.gene08058.t1 MTR_7g451170 41.905 105 60 1 11 115 188 291 1.72e-23 100
MS.gene08058.t1 MTR_3g089045 47.573 103 51 2 14 115 16 116 3.56e-23 97.4
MS.gene08058.t1 MTR_7g061550 35.252 139 82 3 10 140 3 141 1.11e-22 97.4
MS.gene08058.t1 MTR_6g027340 44.898 98 51 2 14 110 16 111 1.59e-22 93.6
MS.gene08058.t1 MTR_4g088015 40.385 104 61 1 11 114 218 320 2.06e-22 97.4
MS.gene08058.t1 MTR_6g027360 43.000 100 54 2 12 110 76 173 1.69e-21 93.2
MS.gene08058.t1 MTR_1g057980 29.442 197 119 5 11 189 77 271 2.12e-21 92.8
MS.gene08058.t1 MTR_3g110028 39.806 103 61 1 14 116 85 186 2.18e-21 95.5
MS.gene08058.t1 MTR_7g037130 42.478 113 59 2 11 118 142 253 2.21e-21 93.6
MS.gene08058.t1 MTR_1g026870 32.680 153 83 3 14 159 85 224 4.23e-21 94.7
MS.gene08058.t1 MTR_6g027370 43.137 102 57 1 14 115 99 199 8.19e-21 92.0
MS.gene08058.t1 MTR_0023s0210 49.351 77 39 0 12 88 7 83 2.39e-20 84.3
MS.gene08058.t1 MTR_5g010650 44.000 100 54 2 10 109 107 204 3.21e-20 91.3
MS.gene08058.t1 MTR_7g035350 41.000 100 58 1 11 110 222 320 5.27e-20 90.5
MS.gene08058.t1 MTR_7g450950 38.000 100 61 1 11 110 154 252 7.83e-20 89.0
MS.gene08058.t1 MTR_8g468380 32.778 180 110 4 17 187 25 202 1.35e-18 86.3
MS.gene08058.t1 MTR_5g038910 42.424 99 56 1 17 115 29 126 3.67e-18 85.1
MS.gene08058.t1 MTR_5g038910 42.424 99 56 1 17 115 29 126 4.59e-18 84.3
MS.gene08058.t1 MTR_8g017480 57.692 52 22 0 1 52 1 52 2.06e-13 64.3
MS.gene08058.t1 MTR_6g055910 58.696 46 19 0 70 115 2 47 8.70e-12 63.9
MS.gene08058.t1 MTR_4g063100 59.524 42 17 0 74 115 5 46 1.78e-11 62.8
MS.gene08058.t1 MTR_2g096380 57.143 42 18 0 74 115 5 46 8.87e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08058.t1 AT5G56110 55.786 337 120 6 1 325 1 320 4.00e-117 341
MS.gene08058.t1 AT4G21440 65.957 141 47 1 1 141 1 140 2.38e-64 207
MS.gene08058.t1 AT4G05100 70.543 129 37 1 1 128 1 129 5.46e-64 205
MS.gene08058.t1 AT4G28110 69.531 128 39 0 1 128 1 128 8.36e-64 203
MS.gene08058.t1 AT5G15310 47.945 219 99 3 1 204 1 219 4.05e-62 198
MS.gene08058.t1 AT3G28470 71.324 136 39 0 1 136 1 136 6.12e-62 200
MS.gene08058.t1 AT4G17785 63.504 137 49 1 1 136 1 137 2.66e-61 199
MS.gene08058.t1 AT5G15310 49.048 210 97 3 1 200 1 210 3.40e-61 198
MS.gene08058.t1 AT4G17785 63.504 137 49 1 1 136 1 137 3.57e-61 199
MS.gene08058.t1 AT5G15310 56.395 172 66 2 1 163 1 172 4.61e-61 197
MS.gene08058.t1 AT3G01140 54.651 172 69 1 1 163 1 172 6.32e-61 198
MS.gene08058.t1 AT5G16770 65.625 128 44 0 1 128 1 128 8.24e-61 197
MS.gene08058.t1 AT5G16770 65.625 128 44 0 1 128 1 128 8.24e-61 197
MS.gene08058.t1 AT1G35515 58.599 157 61 1 1 157 1 153 8.66e-61 193
MS.gene08058.t1 AT3G02940 65.625 128 44 0 1 128 1 128 8.77e-61 197
MS.gene08058.t1 AT1G34670 63.121 141 52 0 1 141 1 141 1.18e-60 198
MS.gene08058.t1 AT5G16770 65.625 128 44 0 1 128 1 128 1.74e-60 197
MS.gene08058.t1 AT5G16770 65.625 128 44 0 1 128 1 128 1.74e-60 197
MS.gene08058.t1 AT3G02940 65.625 128 44 0 1 128 1 128 1.86e-60 196
MS.gene08058.t1 AT3G02940 65.625 128 44 0 1 128 1 128 1.86e-60 196
MS.gene08058.t1 AT5G10280 59.574 141 57 0 1 141 1 141 1.82e-59 194
MS.gene08058.t1 AT4G34990 64.615 130 46 0 1 130 1 130 3.50e-59 191
MS.gene08058.t1 AT4G09460 58.333 144 60 0 1 144 1 144 4.65e-59 190
MS.gene08058.t1 AT3G61250 56.954 151 62 2 1 150 1 149 1.80e-58 190
MS.gene08058.t1 AT1G66230 63.704 135 49 0 1 135 1 135 1.89e-58 190
MS.gene08058.t1 AT3G01140 54.167 168 68 1 5 163 48 215 4.46e-58 192
MS.gene08058.t1 AT2G16720 63.780 127 46 0 1 127 1 127 4.51e-58 188
MS.gene08058.t1 AT4G12350 48.958 192 93 2 1 187 1 192 6.42e-58 188
MS.gene08058.t1 AT4G38620 61.240 129 50 0 1 129 1 129 2.61e-57 187
MS.gene08058.t1 AT5G14340 61.364 132 51 0 1 132 13 144 3.20e-57 186
MS.gene08058.t1 AT4G01680 63.768 138 46 1 1 138 1 134 5.24e-57 185
MS.gene08058.t1 AT5G65230 63.281 128 47 0 1 128 1 128 2.22e-56 185
MS.gene08058.t1 AT5G54230 63.910 133 48 0 1 133 1 133 2.22e-56 186
MS.gene08058.t1 AT5G60890 59.690 129 52 0 1 129 1 129 2.27e-56 185
MS.gene08058.t1 AT4G22680 59.441 143 58 0 1 143 1 143 2.80e-56 184
MS.gene08058.t1 AT1G22640 62.205 127 48 0 1 127 1 127 3.73e-56 183
MS.gene08058.t1 AT4G01680 63.768 138 46 1 1 138 1 134 3.78e-56 186
MS.gene08058.t1 AT1G57560 61.481 135 52 0 1 135 1 135 5.36e-56 184
MS.gene08058.t1 AT5G61420 62.308 130 49 0 1 130 1 130 1.04e-55 185
MS.gene08058.t1 AT5G07690 61.832 131 50 0 1 131 1 131 1.36e-55 184
MS.gene08058.t1 AT1G57560 63.077 130 48 0 1 130 1 130 1.44e-55 182
MS.gene08058.t1 AT5G16600 63.846 130 47 0 1 130 1 130 1.48e-55 184
MS.gene08058.t1 AT5G26660 63.566 129 47 0 1 129 1 129 4.28e-55 183
MS.gene08058.t1 AT1G09540 62.879 132 49 0 1 132 1 132 9.35e-55 183
MS.gene08058.t1 AT1G18570 59.542 131 52 1 1 130 1 131 4.29e-54 181
MS.gene08058.t1 AT5G07700 62.308 130 49 0 1 130 1 130 1.21e-53 179
MS.gene08058.t1 AT5G07700 62.308 130 49 0 1 130 1 130 1.21e-53 179
MS.gene08058.t1 AT2G31180 68.376 117 37 0 1 117 1 117 1.59e-53 176
MS.gene08058.t1 AT1G74080 58.140 129 54 0 1 129 1 129 3.09e-53 178
MS.gene08058.t1 AT2G47460 56.164 146 64 0 1 146 1 146 3.30e-53 179
MS.gene08058.t1 AT3G23250 65.517 116 40 0 1 116 1 116 4.36e-53 176
MS.gene08058.t1 AT4G01680 58.667 150 46 2 1 138 1 146 1.08e-52 177
MS.gene08058.t1 AT1G18710 57.364 129 55 0 1 129 1 129 1.58e-52 174
MS.gene08058.t1 AT1G74430 58.594 128 53 0 1 128 1 128 1.73e-52 174
MS.gene08058.t1 AT5G57620 65.546 119 40 1 1 118 1 119 3.14e-52 175
MS.gene08058.t1 AT1G79180 62.205 127 45 1 2 125 4 130 3.21e-52 174
MS.gene08058.t1 AT3G49690 66.667 117 38 1 1 116 1 117 7.41e-52 174
MS.gene08058.t1 AT3G13540 60.800 125 49 0 5 129 16 140 2.79e-51 170
MS.gene08058.t1 AT5G62470 65.517 116 40 0 1 116 1 116 4.90e-51 172
MS.gene08058.t1 AT3G12720 61.983 121 46 0 6 126 16 136 6.80e-51 171
MS.gene08058.t1 AT1G16490 65.517 116 40 0 2 117 4 119 6.88e-51 170
MS.gene08058.t1 AT1G74650 64.706 119 42 0 1 119 1 119 8.35e-51 171
MS.gene08058.t1 AT5G65790 64.957 117 40 1 1 116 1 117 1.05e-50 172
MS.gene08058.t1 AT5G62320 56.204 137 53 1 2 131 3 139 1.81e-50 168
MS.gene08058.t1 AT2G36890 54.248 153 49 2 1 152 1 133 2.31e-50 169
MS.gene08058.t1 AT1G06180 64.655 116 41 0 1 116 1 116 3.09e-50 167
MS.gene08058.t1 AT2G36890 54.248 153 49 2 1 152 42 174 4.51e-50 170
MS.gene08058.t1 AT5G23000 64.103 117 41 1 1 116 1 117 5.42e-50 169
MS.gene08058.t1 AT5G49330 63.793 116 42 0 1 116 1 116 5.94e-50 169
MS.gene08058.t1 AT3G47600 62.185 119 45 0 1 119 1 119 9.68e-50 169
MS.gene08058.t1 AT3G62610 62.712 118 44 0 1 118 1 118 1.11e-49 169
MS.gene08058.t1 AT4G37780 63.248 117 42 1 1 116 1 117 1.77e-49 167
MS.gene08058.t1 AT5G62470 65.517 116 39 1 1 116 1 115 3.65e-49 168
MS.gene08058.t1 AT3G28910 60.656 122 48 0 1 122 1 122 8.88e-49 166
MS.gene08058.t1 AT1G56160 62.069 116 44 0 2 117 4 119 1.52e-48 164
MS.gene08058.t1 AT1G08810 62.069 116 44 0 1 116 1 116 3.72e-48 163
MS.gene08058.t1 AT3G13890 63.793 116 42 0 1 116 1 116 6.38e-48 165
MS.gene08058.t1 AT3G12820 61.404 114 44 0 3 116 5 118 9.07e-47 158
MS.gene08058.t1 AT1G63910 60.345 116 46 0 1 116 1 116 1.87e-46 161
MS.gene08058.t1 AT1G79180 50.000 160 44 2 2 125 4 163 4.80e-46 159
MS.gene08058.t1 AT3G13890 59.200 125 42 1 1 116 1 125 7.00e-45 157
MS.gene08058.t1 AT5G12870 62.037 108 41 0 12 119 18 125 4.94e-44 152
MS.gene08058.t1 AT5G35550 57.407 108 46 0 9 116 11 118 3.73e-42 147
MS.gene08058.t1 AT3G27920 58.407 113 45 1 8 118 8 120 5.10e-42 145
MS.gene08058.t1 AT5G52600 54.264 129 50 1 9 128 9 137 3.35e-41 142
MS.gene08058.t1 AT5G40330 59.259 108 43 1 13 120 13 119 5.18e-41 142
MS.gene08058.t1 AT5G14750 59.615 104 42 0 13 116 17 120 1.05e-40 141
MS.gene08058.t1 AT3G08500 60.185 108 43 0 9 116 27 134 8.62e-40 143
MS.gene08058.t1 AT3G27810 42.614 176 91 4 12 187 20 185 3.70e-39 138
MS.gene08058.t1 AT5G55020 53.982 113 51 1 12 123 26 138 2.25e-38 142
MS.gene08058.t1 AT1G25340 51.304 115 56 0 13 127 19 133 3.61e-38 137
MS.gene08058.t1 AT2G32460 53.704 108 50 0 8 115 14 121 5.90e-38 141
MS.gene08058.t1 AT5G26660 67.778 90 29 0 40 129 9 98 6.77e-38 137
MS.gene08058.t1 AT2G26960 52.212 113 53 1 9 121 17 128 6.90e-38 140
MS.gene08058.t1 AT2G32460 54.808 104 47 0 12 115 6 109 7.69e-38 140
MS.gene08058.t1 AT5G40350 50.000 128 64 0 12 139 17 144 3.13e-37 132
MS.gene08058.t1 AT1G48000 47.552 143 69 3 12 149 32 173 3.94e-37 133
MS.gene08058.t1 AT5G06100 53.097 113 52 1 12 123 32 144 6.19e-37 137
MS.gene08058.t1 AT5G52260 58.879 107 44 0 9 115 9 115 1.12e-36 133
MS.gene08058.t1 AT4G26930 48.760 121 61 1 12 131 19 139 1.14e-36 135
MS.gene08058.t1 AT5G06100 55.769 104 46 0 12 115 32 135 2.31e-36 137
MS.gene08058.t1 AT5G06100 55.769 104 46 0 12 115 32 135 2.31e-36 137
MS.gene08058.t1 AT5G06100 55.769 104 46 0 12 115 32 135 2.31e-36 137
MS.gene08058.t1 AT5G06100 55.769 104 46 0 12 115 32 135 2.31e-36 137
MS.gene08058.t1 AT4G25560 58.252 103 43 0 13 115 11 113 2.68e-36 132
MS.gene08058.t1 AT3G48920 53.211 109 51 0 9 117 15 123 3.26e-36 131
MS.gene08058.t1 AT3G11440 53.846 104 48 0 12 115 41 144 6.43e-36 135
MS.gene08058.t1 AT2G47190 40.000 165 93 3 8 170 16 176 7.00e-36 131
MS.gene08058.t1 AT3G01530 51.376 109 53 0 8 116 21 129 1.13e-35 128
MS.gene08058.t1 AT1G68320 48.333 120 62 0 10 129 17 136 1.54e-35 130
MS.gene08058.t1 AT3G11440 53.846 104 48 0 12 115 41 144 1.78e-35 135
MS.gene08058.t1 AT3G11440 53.846 104 48 0 12 115 41 144 1.78e-35 135
MS.gene08058.t1 AT3G11440 53.846 104 48 0 12 115 41 144 1.78e-35 135
MS.gene08058.t1 AT4G13480 57.282 103 44 0 13 115 7 109 3.04e-35 129
MS.gene08058.t1 AT3G24310 56.311 103 45 0 13 115 19 121 6.09e-35 128
MS.gene08058.t1 AT3G30210 55.882 102 45 0 13 114 28 129 1.66e-34 127
MS.gene08058.t1 AT1G18960 51.261 119 55 2 17 135 13 128 3.26e-34 127
MS.gene08058.t1 AT1G66370 52.885 104 49 0 12 115 8 111 2.10e-33 124
MS.gene08058.t1 AT1G25340 48.696 115 54 1 13 127 19 128 2.49e-33 124
MS.gene08058.t1 AT3G06490 50.000 126 62 1 11 136 18 142 3.52e-33 125
MS.gene08058.t1 AT1G25340 48.696 115 54 1 13 127 19 128 4.01e-33 124
MS.gene08058.t1 AT1G66380 46.970 132 60 1 12 143 8 129 5.31e-33 119
MS.gene08058.t1 AT3G60460 51.376 109 52 1 7 114 6 114 6.87e-33 124
MS.gene08058.t1 AT5G59780 48.598 107 55 0 9 115 5 111 2.10e-32 120
MS.gene08058.t1 AT2G26950 46.018 113 60 1 9 121 13 124 2.26e-32 124
MS.gene08058.t1 AT5G49620 43.537 147 79 2 8 154 22 164 3.98e-32 122
MS.gene08058.t1 AT3G46130 51.456 103 50 0 13 115 10 112 4.27e-32 120
MS.gene08058.t1 AT3G53200 50.467 107 53 0 9 115 6 112 4.56e-32 120
MS.gene08058.t1 AT5G35550 66.667 72 24 0 45 116 50 121 3.89e-31 118
MS.gene08058.t1 AT2G23290 52.727 110 50 2 8 117 8 115 3.97e-31 119
MS.gene08058.t1 AT1G66390 54.808 104 47 0 12 115 8 111 4.97e-31 117
MS.gene08058.t1 AT4G37260 51.923 104 49 1 14 117 13 115 5.03e-31 119
MS.gene08058.t1 AT1G56650 54.808 104 47 0 12 115 8 111 7.85e-31 117
MS.gene08058.t1 AT5G67300 51.429 105 50 1 14 118 6 109 1.90e-30 117
MS.gene08058.t1 AT3G50060 52.294 109 50 2 10 118 3 109 3.09e-29 114
MS.gene08058.t1 AT5G14750 66.667 69 23 0 48 116 18 86 6.45e-29 109
MS.gene08058.t1 AT2G39880 43.262 141 70 3 14 152 50 182 1.26e-28 114
MS.gene08058.t1 AT3G47600 64.000 75 27 0 45 119 39 113 1.55e-28 112
MS.gene08058.t1 AT5G49620 39.752 161 79 3 8 154 22 178 1.56e-28 112
MS.gene08058.t1 AT3G27810 40.580 138 76 2 45 182 4 135 1.68e-28 108
MS.gene08058.t1 AT3G09230 47.222 108 55 2 9 116 51 156 1.81e-28 114
MS.gene08058.t1 AT1G69560 46.789 109 55 2 9 116 102 208 8.70e-28 110
MS.gene08058.t1 AT1G69560 46.789 109 55 2 9 116 118 224 9.33e-28 111
MS.gene08058.t1 AT1G71030 58.025 81 34 0 51 131 5 85 1.39e-27 106
MS.gene08058.t1 AT3G12820 66.667 69 23 0 48 116 2 70 1.40e-27 107
MS.gene08058.t1 AT1G71030 55.682 88 38 1 44 131 13 99 1.84e-27 106
MS.gene08058.t1 AT5G40350 50.515 97 48 0 43 139 3 99 3.76e-27 105
MS.gene08058.t1 AT3G55730 48.113 106 54 1 14 119 56 160 4.27e-27 110
MS.gene08058.t1 AT5G40360 44.860 107 58 1 8 114 152 257 1.10e-26 108
MS.gene08058.t1 AT1G22640 62.319 69 26 0 59 127 2 70 1.20e-26 104
MS.gene08058.t1 AT5G58850 46.729 107 56 1 11 117 102 207 1.37e-26 109
MS.gene08058.t1 AT3G27785 46.847 111 56 2 8 117 183 291 1.78e-26 108
MS.gene08058.t1 AT5G11050 44.860 107 58 1 11 117 102 207 6.38e-26 107
MS.gene08058.t1 AT5G17800 48.039 102 52 1 14 115 93 193 1.34e-25 104
MS.gene08058.t1 AT1G26780 46.602 103 52 2 14 115 98 198 1.91e-25 103
MS.gene08058.t1 AT1G26780 45.714 105 54 2 12 115 96 198 2.94e-25 104
MS.gene08058.t1 AT5G59780 52.809 89 37 1 27 115 7 90 3.49e-25 101
MS.gene08058.t1 AT1G17950 33.803 213 114 6 14 224 5 192 6.59e-25 101
MS.gene08058.t1 AT4G18770 41.818 110 63 1 8 117 211 319 1.21e-24 103
MS.gene08058.t1 AT3G53200 60.563 71 28 0 45 115 9 79 1.38e-24 99.4
MS.gene08058.t1 AT4G33450 42.593 108 61 1 8 115 13 119 2.40e-24 99.8
MS.gene08058.t1 AT3G46130 58.333 72 30 0 44 115 9 80 2.67e-24 99.0
MS.gene08058.t1 AT1G66380 64.789 71 25 0 45 115 8 78 3.74e-24 95.1
MS.gene08058.t1 AT3G46130 59.155 71 29 0 45 115 20 90 5.42e-24 98.6
MS.gene08058.t1 AT5G02320 44.660 103 56 1 14 116 127 228 8.41e-24 102
MS.gene08058.t1 AT5G02320 44.660 103 56 1 14 116 127 228 8.41e-24 102
MS.gene08058.t1 AT5G02320 44.660 103 56 1 14 116 67 168 1.25e-23 101
MS.gene08058.t1 AT1G73410 47.573 103 51 2 14 115 6 106 2.78e-23 95.9
MS.gene08058.t1 AT1G73410 47.573 103 51 2 14 115 6 106 3.72e-23 96.3
MS.gene08058.t1 AT3G29020 42.718 103 58 1 14 116 65 166 5.65e-23 95.9
MS.gene08058.t1 AT3G29020 42.718 103 58 1 14 116 67 168 1.15e-22 96.3
MS.gene08058.t1 AT4G32730 39.806 103 61 1 14 116 87 188 3.38e-22 97.8
MS.gene08058.t1 AT4G32730 39.806 103 61 1 14 116 87 188 3.38e-22 97.8
MS.gene08058.t1 AT4G32730 39.806 103 61 1 14 116 87 188 3.38e-22 97.8
MS.gene08058.t1 AT4G32730 39.806 103 61 1 14 116 87 188 3.38e-22 97.8
MS.gene08058.t1 AT4G32730 39.806 103 61 1 14 116 87 188 3.79e-22 97.8
MS.gene08058.t1 AT3G09370 44.118 102 56 1 14 115 130 230 4.84e-22 96.7
MS.gene08058.t1 AT3G09370 44.118 102 56 1 14 115 135 235 5.03e-22 96.7
MS.gene08058.t1 AT2G25230 38.333 120 71 2 7 124 19 137 5.66e-22 93.2
MS.gene08058.t1 AT3G09370 44.118 102 56 1 14 115 143 243 6.07e-22 96.7
MS.gene08058.t1 AT5G11510 39.252 107 56 2 14 116 81 182 8.60e-21 93.6
MS.gene08058.t1 AT5G11510 39.252 107 56 2 14 116 81 182 8.60e-21 93.6
MS.gene08058.t1 AT5G11510 39.252 107 56 2 14 116 81 182 8.60e-21 93.6
MS.gene08058.t1 AT5G11510 39.806 103 61 1 14 116 81 182 1.02e-20 93.6
MS.gene08058.t1 AT5G11510 39.806 103 61 1 14 116 81 182 1.03e-20 93.6
MS.gene08058.t1 AT2G37630 32.353 136 85 2 13 141 3 138 1.38e-20 91.7
MS.gene08058.t1 AT3G23250 62.069 58 22 0 59 116 2 59 4.67e-20 87.8
MS.gene08058.t1 AT5G14750 62.069 58 22 0 59 116 2 59 5.47e-20 85.1
MS.gene08058.t1 AT5G14750 62.069 58 22 0 59 116 2 59 5.47e-20 85.1
MS.gene08058.t1 AT5G39700 40.000 100 59 1 15 114 57 155 1.16e-18 82.8
MS.gene08058.t1 AT5G40430 33.835 133 84 3 7 137 47 177 1.23e-18 84.3
MS.gene08058.t1 AT1G66380 45.783 83 45 0 12 94 8 90 2.49e-18 79.7
MS.gene08058.t1 AT2G02820 41.414 99 57 1 17 115 33 130 5.77e-18 83.6
MS.gene08058.t1 AT2G02820 41.414 99 57 1 17 115 33 130 9.92e-18 84.0
MS.gene08058.t1 AT2G02820 41.414 99 57 1 17 115 33 130 9.95e-18 84.0
MS.gene08058.t1 AT1G14350 42.424 99 56 1 17 115 28 125 2.15e-17 82.8
MS.gene08058.t1 AT1G14350 42.424 99 56 1 17 115 28 125 2.15e-17 82.8
MS.gene08058.t1 AT4G00540 38.532 109 63 2 11 116 100 207 4.36e-16 79.0
MS.gene08058.t1 AT4G00540 38.532 109 63 2 11 116 98 205 6.54e-16 78.6
MS.gene08058.t1 AT5G61420 64.000 50 18 0 81 130 2 51 1.69e-15 75.9
MS.gene08058.t1 AT4G28110 70.732 41 12 0 88 128 4 44 1.19e-14 72.0
MS.gene08058.t1 AT5G15310 68.889 45 14 0 84 128 5 49 2.05e-14 72.4
MS.gene08058.t1 AT5G14340 54.717 53 23 1 81 132 2 54 6.71e-14 69.7
MS.gene08058.t1 AT1G74430 55.769 52 23 0 77 128 8 59 2.68e-13 68.2
MS.gene08058.t1 AT1G22640 65.000 40 14 0 88 127 16 55 2.90e-12 65.1
MS.gene08058.t1 AT5G59780 57.143 42 18 0 74 115 5 46 3.49e-11 61.6
MS.gene08058.t1 AT4G25560 58.696 46 19 0 70 115 2 47 4.08e-11 62.4
MS.gene08058.t1 AT3G46130 57.143 42 18 0 74 115 5 46 5.62e-11 61.2
MS.gene08058.t1 AT3G28910 60.000 45 18 0 78 122 2 46 5.73e-11 62.4

Find 89 sgRNAs with CRISPR-Local

Find 110 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGCTTACAGTTAAAGTAAT+TGG 0.210250 3.3:+49150861 None:intergenic
CAAGCCATTCTCCCATTTAA+TGG 0.217063 3.3:-49151037 MS.gene08058:CDS
TAGCAATTTCAGCCATTAAA+TGG 0.223128 3.3:+49151025 None:intergenic
CTGGTAGTTAATTGGTTTCC+TGG 0.259611 3.3:+49150921 None:intergenic
TGTTGTCCCTGGTAGTTAAT+TGG 0.273940 3.3:+49150913 None:intergenic
CAATTCAGCCCATCATGTTT+TGG 0.275499 3.3:-49150676 MS.gene08058:CDS
AATGTTTACCCTACGATGTC+TGG 0.323242 3.3:-49150703 MS.gene08058:CDS
CTCAACATGGCACTCGCAAC+TGG 0.327158 3.3:-49151524 MS.gene08058:CDS
GAAGGACTAACCAGCATTCT+TGG 0.330007 3.3:+49151491 None:intergenic
CATTTCGTGTTCTTGTTGTA+TGG 0.337306 3.3:+49150789 None:intergenic
ACAGTCTGAGTTGAATATAT+TGG 0.366444 3.3:+49150507 None:intergenic
GATTAAGTTTGACCTATCTA+AGG 0.367315 3.3:-49150812 MS.gene08058:CDS
TGCTTCCAGTACATAAACTA+TGG 0.402112 3.3:+49150626 None:intergenic
GAGAATGGCTTGTGGGTGAC+AGG 0.403681 3.3:+49151048 None:intergenic
GCTCTTCTCCATCCGAGAAA+TGG 0.404593 3.3:+49151314 None:intergenic
GAGAGTTTGTTGTCTTCCTC+AGG 0.408299 3.3:+49151558 None:intergenic
CTTGTTGTATGGCCTTAGAT+AGG 0.418669 3.3:+49150800 None:intergenic
TGTAATATTTCTTATACCAT+AGG 0.421907 3.3:+49150448 None:intergenic
ACAACATTCTAATGAAGCTC+TGG 0.423985 3.3:-49150896 MS.gene08058:CDS
GTGTCCCAAGGTTTATTTGT+GGG 0.425448 3.3:+49150763 None:intergenic
AAATGGCCATGTTTCAGATC+AGG 0.429618 3.3:+49151331 None:intergenic
CTGATAGCAGCGCAGCTGCC+AGG 0.436902 3.3:-49151144 MS.gene08058:CDS
TCAGCCATTAAATGGGAGAA+TGG 0.437379 3.3:+49151033 None:intergenic
TCTGAAACATGGCCATTTCT+CGG 0.444221 3.3:-49151326 MS.gene08058:CDS
GTAATATTTCTTATACCATA+GGG 0.469555 3.3:+49150449 None:intergenic
ACATCATTGTCGGTGCGTCC+TGG 0.471385 3.3:+49151126 None:intergenic
AGCAATTTCAGCCATTAAAT+GGG 0.472879 3.3:+49151026 None:intergenic
CTGTTATTGCCAAAACATGA+TGG 0.474602 3.3:+49150667 None:intergenic
ATCGTAGGGTAAACATTGTA+TGG 0.474731 3.3:+49150709 None:intergenic
AAGGACTAACCAGCATTCTT+GGG 0.483633 3.3:+49151492 None:intergenic
TAATTGGTTTCCTGGTAAGA+AGG 0.489199 3.3:+49150929 None:intergenic
CACCTAGCTGAAGCAGCCCT+TGG 0.495944 3.3:-49150976 MS.gene08058:CDS
CAGGAAACCAATTAACTACC+AGG 0.498823 3.3:-49150920 MS.gene08058:CDS
GCTAGGTGAGCTGCCTGCGG+CGG 0.501814 3.3:+49150991 None:intergenic
CGCCTCATTCCCAAGAATGC+TGG 0.504148 3.3:-49151501 MS.gene08058:intron
CATACAACAAGAACACGAAA+TGG 0.504962 3.3:-49150788 MS.gene08058:CDS
GCCATGTTGAGCAATGTAAG+AGG 0.506799 3.3:+49151536 None:intergenic
GGCTGAAATTGCTACAACAT+TGG 0.510087 3.3:-49151016 MS.gene08058:CDS
CGATGATTTAATGAACCCTA+TGG 0.511276 3.3:-49150464 MS.gene08058:CDS
TGGAGCCATAGTTTATGTAC+TGG 0.513371 3.3:-49150631 MS.gene08058:CDS
GTGGAAAGAGCTGCAGGCTA+AGG 0.513697 3.3:-49151372 MS.gene08058:CDS
ATGTTTACCCTACGATGTCT+GGG 0.515478 3.3:-49150702 MS.gene08058:CDS
TACAACATTGGCACCGCCGC+AGG 0.516214 3.3:-49151004 MS.gene08058:CDS
AGAGATGTGGAAAGAGCTGC+AGG 0.518445 3.3:-49151378 MS.gene08058:CDS
GAAAGAGCTGCAGGCTAAGG+TGG 0.518447 3.3:-49151369 MS.gene08058:CDS
AGGTGCTCCACCTTCTTACC+AGG 0.518602 3.3:-49150939 MS.gene08058:CDS
CCTTGGTTGTTTCAAAGATG+AGG 0.521377 3.3:-49150959 MS.gene08058:CDS
AGAATGGCTTGTGGGTGACA+GGG 0.524652 3.3:+49151049 None:intergenic
GGTACCCACAAATAAACCTT+GGG 0.525783 3.3:-49150767 MS.gene08058:CDS
CATAGGGTTCATTAAATCAT+CGG 0.538774 3.3:+49150465 None:intergenic
AACCAGCATTCTTGGGAATG+AGG 0.548940 3.3:+49151499 None:intergenic
CAACATTCTAATGAAGCTCT+GGG 0.549090 3.3:-49150895 MS.gene08058:CDS
GGGTTCATTAAATCATCGGC+TGG 0.556449 3.3:+49150469 None:intergenic
ACTTGCAGTTGTTGCTGCAG+TGG 0.558821 3.3:+49150741 None:intergenic
AAACATGGCCATTTCTCGGA+TGG 0.561724 3.3:-49151322 MS.gene08058:CDS
TAAATAGGTCTTCAGAGATG+TGG 0.563355 3.3:-49151391 MS.gene08058:intron
AAACTGGCTTTGCTGATCCA+TGG 0.566371 3.3:+49150594 None:intergenic
TGGTACCCACAAATAAACCT+TGG 0.568184 3.3:-49150768 MS.gene08058:CDS
TCCTCTTACATTGCTCAACA+TGG 0.569093 3.3:-49151537 MS.gene08058:CDS
ATTGAAACCCAGACATCGTA+GGG 0.569700 3.3:+49150695 None:intergenic
TTGGTTTCCTGGTAAGAAGG+TGG 0.569856 3.3:+49150932 None:intergenic
GGTGTCCCAAGGTTTATTTG+TGG 0.570222 3.3:+49150762 None:intergenic
CTTCATTAGAATGTTGTCCC+TGG 0.570227 3.3:+49150902 None:intergenic
GTTGCTGCAGTGGTGTCCCA+AGG 0.570689 3.3:+49150751 None:intergenic
AATGGCCATGTTTCAGATCA+GGG 0.575848 3.3:+49151332 None:intergenic
ACATTGTCCTTCTCACAGCA+TGG 0.579859 3.3:+49151600 None:intergenic
TAAATGGGAGAATGGCTTGT+GGG 0.580198 3.3:+49151041 None:intergenic
GTACATAAACTATGGCTCCA+TGG 0.588435 3.3:+49150634 None:intergenic
TGGAAGCACATGCACAGCCA+TGG 0.589208 3.3:-49150611 MS.gene08058:CDS
TCGTATTCCATGCTGTGAGA+AGG 0.593369 3.3:-49151607 MS.gene08058:CDS
TCAGCTAGGTGAGCTGCCTG+CGG 0.600156 3.3:+49150988 None:intergenic
TCAACTCAGACTGTGTCGTG+TGG 0.600659 3.3:-49150498 MS.gene08058:CDS
CTTCGCCCTGATCTGAAACA+TGG 0.601248 3.3:-49151337 MS.gene08058:CDS
CAACTCAGACTGTGTCGTGT+GGG 0.601754 3.3:-49150497 MS.gene08058:CDS
AACCAAGGGCTGCTTCAGCT+AGG 0.608754 3.3:+49150974 None:intergenic
AAAACTTGAAGAGGAAAATG+GGG 0.610613 3.3:-49150566 MS.gene08058:CDS
GGAAAATGGGGATGATTCTG+AGG 0.614466 3.3:-49150554 MS.gene08058:CDS
AATTGAAACCCAGACATCGT+AGG 0.615930 3.3:+49150694 None:intergenic
GAGAGGTCAGTGGACACCTG+AGG 0.624551 3.3:-49151574 MS.gene08058:CDS
CATGTTTCAGATCAGGGCGA+AGG 0.628322 3.3:+49151338 None:intergenic
TGTTATTGCCAAAACATGAT+GGG 0.640944 3.3:+49150668 None:intergenic
CCTCATCTTTGAAACAACCA+AGG 0.643946 3.3:+49150959 None:intergenic
AGGAAACCAATTAACTACCA+GGG 0.651894 3.3:-49150919 MS.gene08058:CDS
CTCATCTTTGAAACAACCAA+GGG 0.652070 3.3:+49150960 None:intergenic
GAGAAGGACAATGTGAAGAG+AGG 0.654708 3.3:-49151591 MS.gene08058:CDS
ATAACAGGGATGCATCACCA+TGG 0.693180 3.3:-49150651 MS.gene08058:CDS
TTAAATGGGAGAATGGCTTG+TGG 0.703670 3.3:+49151040 None:intergenic
ACAATGTGAAGAGAGGTCAG+TGG 0.730164 3.3:-49151584 MS.gene08058:CDS
AACATTCTAATGAAGCTCTG+GGG 0.740002 3.3:-49150894 MS.gene08058:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTATATTTAGACGAATA+GGG + chr3.3:49150607-49150626 None:intergenic 15.0%
!!! TTTTGTGGATTAAATTAAAT+AGG - chr3.3:49150665-49150684 MS.gene08058:CDS 15.0%
!! CAAATTATATTTAGACGAAT+AGG + chr3.3:49150608-49150627 None:intergenic 20.0%
!!! ACTTTAATACTTGATTTTTG+TGG - chr3.3:49150650-49150669 MS.gene08058:CDS 20.0%
! AAAAACTTGAAGAGGAAAAT+GGG - chr3.3:49151504-49151523 MS.gene08058:CDS 25.0%
! ACAATGATGTCAAAAATCAT+TGG - chr3.3:49150958-49150977 MS.gene08058:CDS 25.0%
! CTAATGTTATCTATGCATTA+AGG - chr3.3:49150823-49150842 MS.gene08058:CDS 25.0%
! TAATGCATAGATAACATTAG+TGG + chr3.3:49150823-49150842 None:intergenic 25.0%
!! ATGATTTTTGACATCATTGT+CGG + chr3.3:49150958-49150977 None:intergenic 25.0%
AAAACTTGAAGAGGAAAATG+GGG - chr3.3:49151505-49151524 MS.gene08058:CDS 30.0%
AGCAATTTCAGCCATTAAAT+GGG + chr3.3:49151048-49151067 None:intergenic 30.0%
CATAGGGTTCATTAAATCAT+CGG + chr3.3:49151609-49151628 None:intergenic 30.0%
GAAAAACTTGAAGAGGAAAA+TGG - chr3.3:49151503-49151522 MS.gene08058:CDS 30.0%
GATTAAGTTTGACCTATCTA+AGG - chr3.3:49151259-49151278 MS.gene08058:intron 30.0%
GTTTCATGAAAAACTTGAAG+AGG - chr3.3:49151496-49151515 MS.gene08058:intron 30.0%
TAGCAATTTCAGCCATTAAA+TGG + chr3.3:49151049-49151068 None:intergenic 30.0%
TGGCTTACAGTTAAAGTAAT+TGG + chr3.3:49151213-49151232 None:intergenic 30.0%
TGTTATTGCCAAAACATGAT+GGG + chr3.3:49151406-49151425 None:intergenic 30.0%
! ACAGTCTGAGTTGAATATAT+TGG + chr3.3:49151567-49151586 None:intergenic 30.0%
!! CTTCAAGTTTTTCATGAAAC+TGG + chr3.3:49151496-49151515 None:intergenic 30.0%
!!! ATCATGTTTTGGCAATAACA+GGG - chr3.3:49151406-49151425 MS.gene08058:intron 30.0%
!!! TTCATTCAGTTTTTGGTAAC+AGG - chr3.3:49150795-49150814 MS.gene08058:CDS 30.0%
AAAAAGAAACTGTCAGGCAT+GGG - chr3.3:49150993-49151012 MS.gene08058:CDS 35.0%
AACATTCTAATGAAGCTCTG+GGG - chr3.3:49151177-49151196 MS.gene08058:intron 35.0%
AAGCTGAAAAAGAAACTGTC+AGG - chr3.3:49150987-49151006 MS.gene08058:CDS 35.0%
ACAACATTCTAATGAAGCTC+TGG - chr3.3:49151175-49151194 MS.gene08058:intron 35.0%
AGGAAACCAATTAACTACCA+GGG - chr3.3:49151152-49151171 MS.gene08058:CDS 35.0%
ATCGTAGGGTAAACATTGTA+TGG + chr3.3:49151365-49151384 None:intergenic 35.0%
CAACATTCTAATGAAGCTCT+GGG - chr3.3:49151176-49151195 MS.gene08058:intron 35.0%
CATACAACAAGAACACGAAA+TGG - chr3.3:49151283-49151302 MS.gene08058:CDS 35.0%
CGATGATTTAATGAACCCTA+TGG - chr3.3:49151607-49151626 MS.gene08058:CDS 35.0%
CTGTTATTGCCAAAACATGA+TGG + chr3.3:49151407-49151426 None:intergenic 35.0%
TAAATAGGTCTTCAGAGATG+TGG - chr3.3:49150680-49150699 MS.gene08058:CDS 35.0%
TATTTAGACGAATAGGGAGA+AGG + chr3.3:49150601-49150620 None:intergenic 35.0%
TGCTTAAATCGTTGTTCAGA+TGG - chr3.3:49150901-49150920 MS.gene08058:CDS 35.0%
TGCTTCCAGTACATAAACTA+TGG + chr3.3:49151448-49151467 None:intergenic 35.0%
! ACAGCATCTTCTTTTTCTTC+TGG + chr3.3:49151233-49151252 None:intergenic 35.0%
! CATTTCGTGTTCTTGTTGTA+TGG + chr3.3:49151285-49151304 None:intergenic 35.0%
! GTGAAGCTTCATTCAGTTTT+TGG - chr3.3:49150788-49150807 MS.gene08058:CDS 35.0%
! TAATTGGTTTCCTGGTAAGA+AGG + chr3.3:49151145-49151164 None:intergenic 35.0%
!! CTCATCTTTGAAACAACCAA+GGG + chr3.3:49151114-49151133 None:intergenic 35.0%
!!! CATCATGTTTTGGCAATAAC+AGG - chr3.3:49151405-49151424 MS.gene08058:intron 35.0%
!!! TGACAGTTTCTTTTTCAGCT+TGG + chr3.3:49150988-49151007 None:intergenic 35.0%
AAATGGCCATGTTTCAGATC+AGG + chr3.3:49150743-49150762 None:intergenic 40.0%
AAGGACTAACCAGCATTCTT+GGG + chr3.3:49150582-49150601 None:intergenic 40.0%
AATGGCCATGTTTCAGATCA+GGG + chr3.3:49150742-49150761 None:intergenic 40.0%
AATGTTTACCCTACGATGTC+TGG - chr3.3:49151368-49151387 MS.gene08058:CDS 40.0%
AATTGAAACCCAGACATCGT+AGG + chr3.3:49151380-49151399 None:intergenic 40.0%
ATGTTTACCCTACGATGTCT+GGG - chr3.3:49151369-49151388 MS.gene08058:CDS 40.0%
ATTGAAACCCAGACATCGTA+GGG + chr3.3:49151379-49151398 None:intergenic 40.0%
CAAGCCATTCTCCCATTTAA+TGG - chr3.3:49151034-49151053 MS.gene08058:CDS 40.0%
CAGGAAACCAATTAACTACC+AGG - chr3.3:49151151-49151170 MS.gene08058:CDS 40.0%
CTTCATTAGAATGTTGTCCC+TGG + chr3.3:49151172-49151191 None:intergenic 40.0%
GAAAAAGAAACTGTCAGGCA+TGG - chr3.3:49150992-49151011 MS.gene08058:CDS 40.0%
GGCTGAAATTGCTACAACAT+TGG - chr3.3:49151055-49151074 MS.gene08058:CDS 40.0%
GGTACCCACAAATAAACCTT+GGG - chr3.3:49151304-49151323 MS.gene08058:CDS 40.0%
GTACATAAACTATGGCTCCA+TGG + chr3.3:49151440-49151459 None:intergenic 40.0%
GTGTCCCAAGGTTTATTTGT+GGG + chr3.3:49151311-49151330 None:intergenic 40.0%
TCAGCCATTAAATGGGAGAA+TGG + chr3.3:49151041-49151060 None:intergenic 40.0%
TCCTCTTACATTGCTCAACA+TGG - chr3.3:49150534-49150553 MS.gene08058:CDS 40.0%
TGGAGCCATAGTTTATGTAC+TGG - chr3.3:49151440-49151459 MS.gene08058:intron 40.0%
TGGTACCCACAAATAAACCT+TGG - chr3.3:49151303-49151322 MS.gene08058:CDS 40.0%
TGTTGTCCCTGGTAGTTAAT+TGG + chr3.3:49151161-49151180 None:intergenic 40.0%
TTAAATGGGAGAATGGCTTG+TGG + chr3.3:49151034-49151053 None:intergenic 40.0%
! CAATTCAGCCCATCATGTTT+TGG - chr3.3:49151395-49151414 MS.gene08058:intron 40.0%
! CCTTGGTTGTTTCAAAGATG+AGG - chr3.3:49151112-49151131 MS.gene08058:CDS 40.0%
! CTGGTAGTTAATTGGTTTCC+TGG + chr3.3:49151153-49151172 None:intergenic 40.0%
! CTTGTTGTATGGCCTTAGAT+AGG + chr3.3:49151274-49151293 None:intergenic 40.0%
! TAAATGGGAGAATGGCTTGT+GGG + chr3.3:49151033-49151052 None:intergenic 40.0%
! TCTGAAACATGGCCATTTCT+CGG - chr3.3:49150745-49150764 MS.gene08058:CDS 40.0%
!! CCTCATCTTTGAAACAACCA+AGG + chr3.3:49151115-49151134 None:intergenic 40.0%
AAACATGGCCATTTCTCGGA+TGG - chr3.3:49150749-49150768 MS.gene08058:CDS 45.0%
AACCAGCATTCTTGGGAATG+AGG + chr3.3:49150575-49150594 None:intergenic 45.0%
ACAATGTGAAGAGAGGTCAG+TGG - chr3.3:49150487-49150506 MS.gene08058:CDS 45.0%
ACATTGTCCTTCTCACAGCA+TGG + chr3.3:49150474-49150493 None:intergenic 45.0%
ATAACAGGGATGCATCACCA+TGG - chr3.3:49151420-49151439 MS.gene08058:intron 45.0%
GAAGGACTAACCAGCATTCT+TGG + chr3.3:49150583-49150602 None:intergenic 45.0%
GAGAAGGACAATGTGAAGAG+AGG - chr3.3:49150480-49150499 MS.gene08058:CDS 45.0%
GCCATGTTGAGCAATGTAAG+AGG + chr3.3:49150538-49150557 None:intergenic 45.0%
GGAAAATGGGGATGATTCTG+AGG - chr3.3:49151517-49151536 MS.gene08058:CDS 45.0%
GGGTTCATTAAATCATCGGC+TGG + chr3.3:49151605-49151624 None:intergenic 45.0%
GGTGTCCCAAGGTTTATTTG+TGG + chr3.3:49151312-49151331 None:intergenic 45.0%
TCGTATTCCATGCTGTGAGA+AGG - chr3.3:49150464-49150483 MS.gene08058:CDS 45.0%
TTGGTTTCCTGGTAAGAAGG+TGG + chr3.3:49151142-49151161 None:intergenic 45.0%
!! AAACTGGCTTTGCTGATCCA+TGG + chr3.3:49151480-49151499 None:intergenic 45.0%
!! GAGAGTTTGTTGTCTTCCTC+AGG + chr3.3:49150516-49150535 None:intergenic 45.0%
ACTTGCAGTTGTTGCTGCAG+TGG + chr3.3:49151333-49151352 None:intergenic 50.0%
AGAGATGTGGAAAGAGCTGC+AGG - chr3.3:49150693-49150712 MS.gene08058:CDS 50.0%
CAACTCAGACTGTGTCGTGT+GGG - chr3.3:49151574-49151593 MS.gene08058:CDS 50.0%
CATGTTTCAGATCAGGGCGA+AGG + chr3.3:49150736-49150755 None:intergenic 50.0%
GCTCTTCTCCATCCGAGAAA+TGG + chr3.3:49150760-49150779 None:intergenic 50.0%
TCAACTCAGACTGTGTCGTG+TGG - chr3.3:49151573-49151592 MS.gene08058:CDS 50.0%
! AGAATGGCTTGTGGGTGACA+GGG + chr3.3:49151025-49151044 None:intergenic 50.0%
! CTTCGCCCTGATCTGAAACA+TGG - chr3.3:49150734-49150753 MS.gene08058:CDS 50.0%
AACCAAGGGCTGCTTCAGCT+AGG + chr3.3:49151100-49151119 None:intergenic 55.0%
ACATCATTGTCGGTGCGTCC+TGG + chr3.3:49150948-49150967 None:intergenic 55.0%
AGGTGCTCCACCTTCTTACC+AGG - chr3.3:49151132-49151151 MS.gene08058:CDS 55.0%
CGCCTCATTCCCAAGAATGC+TGG - chr3.3:49150570-49150589 MS.gene08058:CDS 55.0%
CTCAACATGGCACTCGCAAC+TGG - chr3.3:49150547-49150566 MS.gene08058:CDS 55.0%
GAAAGAGCTGCAGGCTAAGG+TGG - chr3.3:49150702-49150721 MS.gene08058:CDS 55.0%
GTGGAAAGAGCTGCAGGCTA+AGG - chr3.3:49150699-49150718 MS.gene08058:CDS 55.0%
! GAGAATGGCTTGTGGGTGAC+AGG + chr3.3:49151026-49151045 None:intergenic 55.0%
! TGGAAGCACATGCACAGCCA+TGG - chr3.3:49151460-49151479 MS.gene08058:intron 55.0%
CACCTAGCTGAAGCAGCCCT+TGG - chr3.3:49151095-49151114 MS.gene08058:CDS 60.0%
GAGAGGTCAGTGGACACCTG+AGG - chr3.3:49150497-49150516 MS.gene08058:CDS 60.0%
GTTGCTGCAGTGGTGTCCCA+AGG + chr3.3:49151323-49151342 None:intergenic 60.0%
TACAACATTGGCACCGCCGC+AGG - chr3.3:49151067-49151086 MS.gene08058:CDS 60.0%
TCAGCTAGGTGAGCTGCCTG+CGG + chr3.3:49151086-49151105 None:intergenic 60.0%
CTGATAGCAGCGCAGCTGCC+AGG - chr3.3:49150927-49150946 MS.gene08058:CDS 65.0%
GCTAGGTGAGCTGCCTGCGG+CGG + chr3.3:49151083-49151102 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 49150459 49151634 49150459 ID=MS.gene08058
chr3.3 mRNA 49150459 49151634 49150459 ID=MS.gene08058.t1;Parent=MS.gene08058
chr3.3 exon 49151502 49151634 49151502 ID=MS.gene08058.t1.exon1;Parent=MS.gene08058.t1
chr3.3 CDS 49151502 49151634 49151502 ID=cds.MS.gene08058.t1;Parent=MS.gene08058.t1
chr3.3 exon 49151277 49151406 49151277 ID=MS.gene08058.t1.exon2;Parent=MS.gene08058.t1
chr3.3 CDS 49151277 49151406 49151277 ID=cds.MS.gene08058.t1;Parent=MS.gene08058.t1
chr3.3 exon 49150459 49151173 49150459 ID=MS.gene08058.t1.exon3;Parent=MS.gene08058.t1
chr3.3 CDS 49150459 49151173 49150459 ID=cds.MS.gene08058.t1;Parent=MS.gene08058.t1
Gene Sequence

>MS.gene08058

ATGGGTCGTATTCCATGCTGTGAGAAGGACAATGTGAAGAGAGGTCAGTGGACACCTGAGGAAGACAACAAACTCTCCTCTTACATTGCTCAACATGGCACTCGCAACTGGCGCCTCATTCCCAAGAATGCTGGTTAGTCCTTCTCCCTATTCGTCTAAATATAATTTGAATCAAAATGTCAATAAAACTAACTTTAATACTTGATTTTTGTGGATTAAATTAAATAGGTCTTCAGAGATGTGGAAAGAGCTGCAGGCTAAGGTGGACTAATTACCTTCGCCCTGATCTGAAACATGGCCATTTCTCGGATGGAGAAGAGCAAACAATTGTGAAGCTTCATTCAGTTTTTGGTAACAGGTACCACTAATGTTATCTATGCATTAAGGTTATGTTATGTTATTCGTAGTGTATGAGATTCTCTTTATCACATTGTTAATGATTTGCTTAAATCGTTGTTCAGATGGTCTCTGATAGCAGCGCAGCTGCCAGGACGCACCGACAATGATGTCAAAAATCATTGGAACACCAAGCTGAAAAAGAAACTGTCAGGCATGGGTATAGACCCTGTCACCCACAAGCCATTCTCCCATTTAATGGCTGAAATTGCTACAACATTGGCACCGCCGCAGGCAGCTCACCTAGCTGAAGCAGCCCTTGGTTGTTTCAAAGATGAGGTGCTCCACCTTCTTACCAGGAAACCAATTAACTACCAGGGACAACATTCTAATGAAGCTCTGGGGAATAACATCACCAATTACTTTAACTGTAAGCCAGAAGAAAAAGAAGATGCTGTTGAGAAGATTAAGTTTGACCTATCTAAGGCCATACAACAAGAACACGAAATGGTACCCACAAATAAACCTTGGGACACCACTGCAGCAACAACTGCAAGTTTTGCAATGCCATACAATGTTTACCCTACGATGTCTGGGTTTCAATTCAGCCCATCATGTTTTGGCAATAACAGGGATGCATCACCATGGAGCCATAGTTTATGTACTGGAAGCACATGCACAGCCATGGATCAGCAAAGCCAGTTTCATGAAAAACTTGAAGAGGAAAATGGGGATGATTCTGAGGCTACAAAAGAAATTAGAAATCTATCCAATATATTCAACTCAGACTGTGTCGTGTGGGATTTACCAGCCGATGATTTAATGAACCCTATGGTATAA
Protein sequence

>MS.gene08058.t1

MGRIPCCEKDNVKRGQWTPEEDNKLSSYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNYLRPDLKHGHFSDGEEQTIVKLHSVFGNRWSLIAAQLPGRTDNDVKNHWNTKLKKKLSGMGIDPVTHKPFSHLMAEIATTLAPPQAAHLAEAALGCFKDEVLHLLTRKPINYQGQHSNEALGNNITNYFNCKPEEKEDAVEKIKFDLSKAIQQEHEMVPTNKPWDTTAATTASFAMPYNVYPTMSGFQFSPSCFGNNRDASPWSHSLCTGSTCTAMDQQSQFHEKLEEENGDDSEATKEIRNLSNIFNSDCVVWDLPADDLMNPMV