Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08490.t1 | XP_013444514.1 | 82.7 | 341 | 34 | 2 | 5 | 320 | 60 | 400 | 4.10E-153 | 550.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08490.t1 | F4JN35 | 54.6 | 108 | 41 | 3 | 6 | 107 | 58 | 163 | 3.7e-25 | 117.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08490.t1 | G7ZZI3 | 82.7 | 341 | 34 | 2 | 5 | 320 | 60 | 400 | 3.0e-153 | 550.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene08490.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08490.t1 | MTR_8g023840 | 81.977 | 344 | 37 | 2 | 2 | 320 | 57 | 400 | 0.0 | 552 |
MS.gene08490.t1 | MTR_8g023860 | 63.056 | 360 | 84 | 5 | 6 | 318 | 62 | 419 | 2.90e-146 | 418 |
MS.gene08490.t1 | MTR_8g023930 | 63.889 | 216 | 68 | 2 | 6 | 211 | 74 | 289 | 1.50e-88 | 273 |
MS.gene08490.t1 | MTR_8g023900 | 59.447 | 217 | 77 | 2 | 6 | 211 | 243 | 459 | 8.09e-85 | 263 |
MS.gene08490.t1 | MTR_8g023900 | 65.323 | 124 | 41 | 2 | 6 | 127 | 62 | 185 | 1.30e-49 | 172 |
MS.gene08490.t1 | MTR_3g093040 | 52.066 | 121 | 46 | 5 | 6 | 120 | 157 | 271 | 2.36e-29 | 114 |
MS.gene08490.t1 | MTR_3g093050 | 53.636 | 110 | 43 | 4 | 6 | 109 | 71 | 178 | 2.05e-28 | 115 |
MS.gene08490.t1 | MTR_3g093050 | 53.636 | 110 | 43 | 4 | 6 | 109 | 71 | 178 | 2.63e-28 | 115 |
MS.gene08490.t1 | MTR_5g069030 | 52.336 | 107 | 43 | 3 | 6 | 106 | 74 | 178 | 3.99e-28 | 114 |
MS.gene08490.t1 | MTR_8g023880 | 37.281 | 228 | 106 | 10 | 2 | 211 | 53 | 261 | 2.14e-27 | 108 |
MS.gene08490.t1 | MTR_6g477900 | 51.852 | 108 | 44 | 4 | 2 | 103 | 51 | 156 | 2.97e-27 | 107 |
MS.gene08490.t1 | MTR_3g064580 | 43.182 | 132 | 66 | 4 | 6 | 130 | 55 | 184 | 4.55e-25 | 105 |
MS.gene08490.t1 | MTR_5g014300 | 37.824 | 193 | 102 | 7 | 6 | 183 | 55 | 244 | 5.37e-25 | 103 |
MS.gene08490.t1 | MTR_5g076850 | 49.524 | 105 | 45 | 3 | 6 | 104 | 55 | 157 | 6.79e-25 | 105 |
MS.gene08490.t1 | MTR_2g064090 | 47.170 | 106 | 47 | 3 | 6 | 104 | 55 | 158 | 5.44e-24 | 100 |
MS.gene08490.t1 | MTR_2g086880 | 43.200 | 125 | 65 | 4 | 6 | 129 | 67 | 186 | 7.86e-24 | 102 |
MS.gene08490.t1 | MTR_2g086880 | 42.636 | 129 | 68 | 4 | 6 | 133 | 67 | 190 | 8.48e-24 | 101 |
MS.gene08490.t1 | MTR_3g109340 | 50.000 | 100 | 46 | 2 | 9 | 104 | 72 | 171 | 2.23e-23 | 99.0 |
MS.gene08490.t1 | MTR_2g080010 | 40.157 | 127 | 52 | 3 | 14 | 116 | 70 | 196 | 4.81e-23 | 98.2 |
MS.gene08490.t1 | MTR_7g085220 | 36.310 | 168 | 79 | 7 | 14 | 160 | 63 | 223 | 8.65e-23 | 97.1 |
MS.gene08490.t1 | MTR_2g079990 | 30.357 | 280 | 156 | 10 | 14 | 264 | 71 | 340 | 2.65e-22 | 95.9 |
MS.gene08490.t1 | MTR_3g109340 | 50.495 | 101 | 45 | 3 | 9 | 104 | 72 | 172 | 2.67e-22 | 96.3 |
MS.gene08490.t1 | MTR_8g094580 | 47.573 | 103 | 41 | 4 | 14 | 106 | 8 | 107 | 3.71e-22 | 93.2 |
MS.gene08490.t1 | MTR_3g096140 | 45.192 | 104 | 49 | 4 | 6 | 103 | 56 | 157 | 6.13e-22 | 93.6 |
MS.gene08490.t1 | MTR_4g089135 | 50.602 | 83 | 40 | 1 | 14 | 95 | 70 | 152 | 6.58e-22 | 94.7 |
MS.gene08490.t1 | MTR_4g098630 | 42.446 | 139 | 67 | 5 | 6 | 135 | 55 | 189 | 8.33e-22 | 94.0 |
MS.gene08490.t1 | MTR_8g094580 | 47.573 | 103 | 41 | 4 | 14 | 106 | 62 | 161 | 9.61e-22 | 93.2 |
MS.gene08490.t1 | MTR_3g096140 | 45.192 | 104 | 49 | 4 | 6 | 103 | 35 | 136 | 1.32e-21 | 94.0 |
MS.gene08490.t1 | MTR_3g096140 | 45.192 | 104 | 49 | 4 | 6 | 103 | 56 | 157 | 1.56e-21 | 94.0 |
MS.gene08490.t1 | MTR_7g005280 | 42.991 | 107 | 57 | 2 | 14 | 116 | 67 | 173 | 1.56e-21 | 92.0 |
MS.gene08490.t1 | MTR_3g096920 | 49.020 | 102 | 40 | 4 | 14 | 106 | 62 | 160 | 2.06e-21 | 92.4 |
MS.gene08490.t1 | MTR_4g036030 | 46.154 | 104 | 48 | 4 | 5 | 103 | 56 | 156 | 5.92e-21 | 92.0 |
MS.gene08490.t1 | MTR_8g059170 | 45.872 | 109 | 41 | 4 | 14 | 110 | 69 | 171 | 6.96e-21 | 91.7 |
MS.gene08490.t1 | MTR_1g090723 | 47.619 | 105 | 48 | 3 | 5 | 104 | 57 | 159 | 7.48e-21 | 93.6 |
MS.gene08490.t1 | MTR_1g090723 | 47.619 | 105 | 48 | 3 | 5 | 104 | 57 | 159 | 7.63e-21 | 93.6 |
MS.gene08490.t1 | MTR_2157s0010 | 45.794 | 107 | 42 | 4 | 14 | 104 | 63 | 169 | 1.06e-20 | 90.1 |
MS.gene08490.t1 | MTR_4g081870 | 47.115 | 104 | 35 | 4 | 14 | 103 | 64 | 161 | 1.07e-20 | 90.1 |
MS.gene08490.t1 | MTR_4g035590 | 46.078 | 102 | 50 | 3 | 5 | 103 | 57 | 156 | 1.27e-20 | 91.3 |
MS.gene08490.t1 | MTR_3g088110 | 47.475 | 99 | 40 | 3 | 14 | 103 | 62 | 157 | 1.31e-20 | 90.1 |
MS.gene08490.t1 | MTR_2g078700 | 57.143 | 77 | 32 | 1 | 9 | 84 | 73 | 149 | 1.32e-20 | 91.7 |
MS.gene08490.t1 | MTR_4g075980 | 42.373 | 118 | 58 | 4 | 9 | 116 | 65 | 182 | 1.47e-20 | 90.5 |
MS.gene08490.t1 | MTR_6g084430 | 47.573 | 103 | 46 | 4 | 14 | 110 | 60 | 160 | 1.60e-20 | 90.5 |
MS.gene08490.t1 | MTR_1g069805 | 44.554 | 101 | 54 | 2 | 7 | 105 | 58 | 158 | 2.40e-20 | 89.4 |
MS.gene08490.t1 | MTR_1g090720 | 44.545 | 110 | 47 | 3 | 6 | 103 | 91 | 198 | 5.18e-20 | 90.5 |
MS.gene08490.t1 | MTR_1g090723 | 46.296 | 108 | 46 | 4 | 5 | 104 | 57 | 160 | 5.27e-20 | 90.9 |
MS.gene08490.t1 | MTR_8g467490 | 39.640 | 111 | 52 | 2 | 14 | 109 | 69 | 179 | 8.39e-20 | 89.4 |
MS.gene08490.t1 | MTR_1g008740 | 46.875 | 96 | 46 | 2 | 14 | 104 | 83 | 178 | 8.50e-20 | 89.0 |
MS.gene08490.t1 | MTR_1g096430 | 32.370 | 173 | 104 | 6 | 5 | 167 | 56 | 225 | 8.91e-20 | 88.6 |
MS.gene08490.t1 | MTR_1g008740 | 46.875 | 96 | 46 | 2 | 14 | 104 | 69 | 164 | 9.07e-20 | 89.0 |
MS.gene08490.t1 | MTR_5g012080 | 43.396 | 106 | 50 | 4 | 5 | 103 | 56 | 158 | 1.03e-19 | 88.6 |
MS.gene08490.t1 | MTR_2g062730 | 36.424 | 151 | 80 | 6 | 5 | 141 | 59 | 207 | 1.05e-19 | 88.6 |
MS.gene08490.t1 | MTR_8g076110 | 41.748 | 103 | 54 | 3 | 5 | 103 | 55 | 155 | 1.26e-19 | 87.8 |
MS.gene08490.t1 | MTR_0036s0150 | 47.115 | 104 | 48 | 3 | 6 | 104 | 55 | 156 | 1.91e-19 | 89.4 |
MS.gene08490.t1 | MTR_2g064470 | 41.525 | 118 | 59 | 4 | 14 | 123 | 64 | 179 | 2.05e-19 | 87.4 |
MS.gene08490.t1 | MTR_4g134460 | 47.368 | 95 | 45 | 3 | 14 | 104 | 109 | 202 | 2.46e-19 | 88.6 |
MS.gene08490.t1 | MTR_8g024480 | 38.961 | 154 | 73 | 6 | 5 | 143 | 64 | 211 | 2.56e-19 | 88.2 |
MS.gene08490.t1 | MTR_5g041940 | 42.982 | 114 | 45 | 5 | 14 | 113 | 58 | 165 | 2.72e-19 | 85.9 |
MS.gene08490.t1 | MTR_7g097090 | 45.833 | 96 | 50 | 2 | 7 | 100 | 58 | 153 | 3.18e-19 | 86.3 |
MS.gene08490.t1 | MTR_7g011130 | 55.696 | 79 | 32 | 3 | 7 | 84 | 67 | 143 | 3.39e-19 | 87.4 |
MS.gene08490.t1 | MTR_7g085260 | 51.899 | 79 | 35 | 2 | 9 | 84 | 67 | 145 | 4.35e-19 | 87.4 |
MS.gene08490.t1 | MTR_3g096920 | 54.545 | 77 | 31 | 2 | 14 | 89 | 62 | 135 | 4.70e-19 | 86.7 |
MS.gene08490.t1 | MTR_8g099750 | 41.584 | 101 | 48 | 2 | 11 | 100 | 64 | 164 | 4.96e-19 | 84.7 |
MS.gene08490.t1 | MTR_3g070030 | 42.636 | 129 | 60 | 6 | 7 | 123 | 67 | 193 | 5.73e-19 | 86.7 |
MS.gene08490.t1 | MTR_6g032770 | 51.948 | 77 | 36 | 1 | 9 | 84 | 68 | 144 | 7.16e-19 | 86.7 |
MS.gene08490.t1 | MTR_3g435150 | 46.154 | 104 | 46 | 4 | 9 | 104 | 66 | 167 | 8.91e-19 | 85.5 |
MS.gene08490.t1 | MTR_4g108760 | 30.677 | 251 | 140 | 11 | 9 | 229 | 67 | 313 | 9.00e-19 | 86.3 |
MS.gene08490.t1 | MTR_4g101680 | 41.748 | 103 | 54 | 3 | 5 | 103 | 56 | 156 | 9.05e-19 | 86.3 |
MS.gene08490.t1 | MTR_8g063550 | 40.385 | 104 | 54 | 3 | 6 | 103 | 55 | 156 | 1.07e-18 | 86.7 |
MS.gene08490.t1 | MTR_8g063550 | 40.385 | 104 | 54 | 3 | 6 | 103 | 55 | 156 | 1.25e-18 | 85.5 |
MS.gene08490.t1 | MTR_7g100990 | 34.932 | 146 | 82 | 5 | 14 | 147 | 66 | 210 | 1.56e-18 | 85.1 |
MS.gene08490.t1 | MTR_2g093810 | 43.810 | 105 | 41 | 3 | 14 | 104 | 69 | 169 | 1.64e-18 | 85.1 |
MS.gene08490.t1 | MTR_1g097300 | 37.126 | 167 | 74 | 8 | 6 | 149 | 68 | 226 | 1.75e-18 | 86.3 |
MS.gene08490.t1 | MTR_5g021710 | 44.231 | 104 | 50 | 4 | 5 | 103 | 57 | 157 | 2.08e-18 | 85.1 |
MS.gene08490.t1 | MTR_5g040420 | 38.182 | 110 | 54 | 2 | 14 | 109 | 69 | 178 | 2.10e-18 | 85.5 |
MS.gene08490.t1 | MTR_8g063550 | 40.385 | 104 | 54 | 3 | 6 | 103 | 55 | 156 | 3.33e-18 | 85.1 |
MS.gene08490.t1 | MTR_2g079990 | 55.556 | 72 | 29 | 2 | 14 | 84 | 71 | 140 | 4.80e-18 | 84.3 |
MS.gene08490.t1 | MTR_7g011120 | 54.430 | 79 | 33 | 3 | 7 | 84 | 56 | 132 | 8.90e-18 | 82.8 |
MS.gene08490.t1 | MTR_7g070140 | 41.860 | 86 | 48 | 2 | 1 | 84 | 5 | 90 | 1.40e-17 | 78.2 |
MS.gene08490.t1 | MTR_6g011860 | 38.053 | 113 | 54 | 3 | 7 | 104 | 63 | 174 | 1.54e-17 | 82.8 |
MS.gene08490.t1 | MTR_3g116070 | 48.101 | 79 | 40 | 1 | 7 | 84 | 72 | 150 | 2.38e-17 | 82.0 |
MS.gene08490.t1 | MTR_2g086690 | 42.574 | 101 | 48 | 3 | 9 | 100 | 60 | 159 | 9.33e-17 | 79.0 |
MS.gene08490.t1 | MTR_8g093580 | 37.500 | 104 | 57 | 3 | 6 | 103 | 55 | 156 | 2.00e-16 | 80.1 |
MS.gene08490.t1 | MTR_6g012670 | 46.316 | 95 | 42 | 3 | 14 | 107 | 75 | 161 | 2.14e-16 | 79.0 |
MS.gene08490.t1 | MTR_4g052620 | 40.777 | 103 | 51 | 3 | 7 | 100 | 58 | 159 | 3.74e-16 | 77.4 |
MS.gene08490.t1 | MTR_2g068880 | 36.975 | 119 | 56 | 3 | 14 | 113 | 78 | 196 | 4.60e-15 | 75.1 |
MS.gene08490.t1 | MTR_2g068920 | 37.391 | 115 | 53 | 3 | 8 | 103 | 71 | 185 | 5.12e-15 | 74.7 |
MS.gene08490.t1 | MTR_7g105170 | 36.792 | 106 | 55 | 3 | 11 | 105 | 62 | 166 | 7.45e-15 | 73.6 |
MS.gene08490.t1 | MTR_5g090970 | 49.315 | 73 | 35 | 2 | 14 | 84 | 73 | 145 | 2.64e-13 | 69.7 |
MS.gene08490.t1 | MTR_5g090970 | 49.315 | 73 | 35 | 2 | 14 | 84 | 72 | 144 | 2.75e-13 | 69.7 |
MS.gene08490.t1 | MTR_3g098810 | 35.185 | 108 | 56 | 3 | 16 | 109 | 69 | 176 | 4.17e-13 | 68.2 |
MS.gene08490.t1 | MTR_3g098810 | 40.789 | 76 | 42 | 2 | 16 | 88 | 69 | 144 | 4.20e-12 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08490.t1 | AT4G35580 | 52.212 | 113 | 46 | 3 | 2 | 108 | 54 | 164 | 2.87e-30 | 120 |
MS.gene08490.t1 | AT4G35580 | 52.212 | 113 | 46 | 3 | 2 | 108 | 54 | 164 | 3.29e-30 | 120 |
MS.gene08490.t1 | AT4G35580 | 52.212 | 113 | 46 | 3 | 2 | 108 | 54 | 164 | 3.90e-30 | 119 |
MS.gene08490.t1 | AT4G01550 | 41.618 | 173 | 91 | 6 | 2 | 172 | 50 | 214 | 4.89e-30 | 119 |
MS.gene08490.t1 | AT3G49530 | 50.893 | 112 | 48 | 3 | 6 | 111 | 62 | 172 | 4.57e-28 | 112 |
MS.gene08490.t1 | AT3G49530 | 50.893 | 112 | 48 | 3 | 6 | 111 | 62 | 172 | 7.96e-28 | 112 |
MS.gene08490.t1 | AT4G17980 | 49.074 | 108 | 47 | 2 | 6 | 105 | 55 | 162 | 1.65e-27 | 108 |
MS.gene08490.t1 | AT4G17980 | 49.074 | 108 | 47 | 2 | 6 | 105 | 55 | 162 | 3.77e-27 | 108 |
MS.gene08490.t1 | AT1G33060 | 52.381 | 105 | 42 | 3 | 5 | 103 | 72 | 174 | 5.73e-27 | 111 |
MS.gene08490.t1 | AT1G33060 | 52.381 | 105 | 42 | 3 | 5 | 103 | 72 | 174 | 6.11e-27 | 111 |
MS.gene08490.t1 | AT4G01520 | 37.195 | 164 | 85 | 6 | 8 | 153 | 57 | 220 | 1.36e-26 | 107 |
MS.gene08490.t1 | AT3G17730 | 46.281 | 121 | 57 | 3 | 2 | 116 | 51 | 169 | 1.68e-26 | 105 |
MS.gene08490.t1 | AT5G17260 | 50.000 | 114 | 42 | 4 | 6 | 109 | 55 | 163 | 2.81e-26 | 108 |
MS.gene08490.t1 | AT5G24590 | 49.057 | 106 | 47 | 3 | 6 | 105 | 62 | 166 | 3.68e-26 | 108 |
MS.gene08490.t1 | AT4G01540 | 37.195 | 164 | 85 | 6 | 8 | 153 | 57 | 220 | 5.52e-26 | 107 |
MS.gene08490.t1 | AT4G01540 | 37.195 | 164 | 85 | 6 | 8 | 153 | 57 | 220 | 8.33e-26 | 106 |
MS.gene08490.t1 | AT4G01540 | 37.195 | 164 | 85 | 6 | 8 | 153 | 57 | 220 | 8.50e-26 | 106 |
MS.gene08490.t1 | AT4G01540 | 37.195 | 164 | 85 | 6 | 8 | 153 | 57 | 220 | 1.13e-25 | 107 |
MS.gene08490.t1 | AT3G03200 | 48.246 | 114 | 44 | 4 | 6 | 109 | 55 | 163 | 3.80e-25 | 105 |
MS.gene08490.t1 | AT1G65910 | 50.000 | 114 | 47 | 4 | 6 | 111 | 55 | 166 | 5.56e-25 | 105 |
MS.gene08490.t1 | AT3G10480 | 47.273 | 110 | 49 | 3 | 1 | 103 | 104 | 211 | 1.91e-24 | 103 |
MS.gene08490.t1 | AT5G46590 | 46.154 | 117 | 55 | 3 | 6 | 115 | 55 | 170 | 6.04e-24 | 99.8 |
MS.gene08490.t1 | AT3G10480 | 45.872 | 109 | 50 | 3 | 2 | 103 | 72 | 178 | 6.14e-24 | 101 |
MS.gene08490.t1 | AT3G10480 | 45.370 | 108 | 51 | 3 | 2 | 103 | 72 | 177 | 2.43e-23 | 100 |
MS.gene08490.t1 | AT3G10490 | 44.954 | 109 | 51 | 3 | 2 | 103 | 72 | 178 | 4.64e-23 | 95.9 |
MS.gene08490.t1 | AT3G10490 | 44.954 | 109 | 51 | 3 | 2 | 103 | 72 | 178 | 7.87e-23 | 98.6 |
MS.gene08490.t1 | AT1G62700 | 40.000 | 130 | 69 | 4 | 5 | 130 | 56 | 180 | 8.37e-23 | 98.2 |
MS.gene08490.t1 | AT1G62700 | 40.000 | 130 | 69 | 4 | 5 | 130 | 56 | 180 | 8.37e-23 | 98.2 |
MS.gene08490.t1 | AT3G15510 | 40.323 | 124 | 55 | 3 | 14 | 118 | 72 | 195 | 2.16e-22 | 96.7 |
MS.gene08490.t1 | AT5G04410 | 48.571 | 105 | 46 | 3 | 6 | 104 | 58 | 160 | 2.31e-22 | 97.8 |
MS.gene08490.t1 | AT1G52890 | 45.217 | 115 | 47 | 4 | 14 | 118 | 69 | 177 | 2.32e-22 | 95.5 |
MS.gene08490.t1 | AT3G15500 | 49.074 | 108 | 36 | 5 | 14 | 108 | 69 | 170 | 2.44e-22 | 95.5 |
MS.gene08490.t1 | AT5G08790 | 47.525 | 101 | 39 | 4 | 14 | 103 | 62 | 159 | 5.27e-22 | 94.0 |
MS.gene08490.t1 | AT3G10500 | 49.524 | 105 | 45 | 4 | 6 | 104 | 58 | 160 | 5.87e-22 | 96.7 |
MS.gene08490.t1 | AT3G04070 | 45.794 | 107 | 42 | 3 | 14 | 104 | 65 | 171 | 1.27e-21 | 94.0 |
MS.gene08490.t1 | AT1G12260 | 45.192 | 104 | 49 | 4 | 5 | 103 | 56 | 156 | 1.56e-21 | 94.0 |
MS.gene08490.t1 | AT4G27410 | 49.000 | 100 | 35 | 4 | 14 | 103 | 69 | 162 | 2.17e-21 | 92.8 |
MS.gene08490.t1 | AT1G12260 | 45.192 | 104 | 49 | 4 | 5 | 103 | 56 | 156 | 2.30e-21 | 94.0 |
MS.gene08490.t1 | AT3G18400 | 50.000 | 102 | 42 | 5 | 14 | 108 | 60 | 159 | 3.05e-21 | 92.4 |
MS.gene08490.t1 | AT1G32510 | 44.643 | 112 | 50 | 3 | 6 | 105 | 55 | 166 | 3.52e-21 | 91.7 |
MS.gene08490.t1 | AT1G01720 | 47.000 | 100 | 40 | 3 | 14 | 103 | 62 | 158 | 3.72e-21 | 91.7 |
MS.gene08490.t1 | AT4G27410 | 49.000 | 100 | 35 | 4 | 14 | 103 | 86 | 179 | 5.26e-21 | 92.0 |
MS.gene08490.t1 | AT5G63790 | 39.850 | 133 | 59 | 4 | 14 | 128 | 115 | 244 | 8.89e-21 | 91.3 |
MS.gene08490.t1 | AT5G63790 | 39.850 | 133 | 59 | 4 | 14 | 128 | 105 | 234 | 9.30e-21 | 91.3 |
MS.gene08490.t1 | AT2G24430 | 48.454 | 97 | 45 | 2 | 14 | 105 | 71 | 167 | 1.02e-20 | 91.3 |
MS.gene08490.t1 | AT2G24430 | 48.454 | 97 | 45 | 2 | 14 | 105 | 71 | 167 | 1.02e-20 | 91.3 |
MS.gene08490.t1 | AT5G46590 | 55.000 | 80 | 34 | 2 | 6 | 84 | 55 | 133 | 1.14e-20 | 90.5 |
MS.gene08490.t1 | AT1G77450 | 46.465 | 99 | 41 | 3 | 14 | 103 | 65 | 160 | 1.29e-20 | 89.7 |
MS.gene08490.t1 | AT1G76420 | 43.137 | 102 | 53 | 2 | 7 | 103 | 70 | 171 | 1.52e-20 | 90.9 |
MS.gene08490.t1 | AT1G54330 | 48.515 | 101 | 47 | 3 | 6 | 103 | 55 | 153 | 1.78e-20 | 90.1 |
MS.gene08490.t1 | AT1G71930 | 44.762 | 105 | 52 | 3 | 3 | 103 | 56 | 158 | 1.91e-20 | 90.5 |
MS.gene08490.t1 | AT1G71930 | 44.762 | 105 | 52 | 3 | 3 | 103 | 56 | 158 | 1.91e-20 | 90.5 |
MS.gene08490.t1 | AT5G09330 | 45.192 | 104 | 49 | 3 | 6 | 103 | 55 | 156 | 2.20e-20 | 91.7 |
MS.gene08490.t1 | AT5G09330 | 45.192 | 104 | 49 | 3 | 6 | 103 | 55 | 156 | 2.20e-20 | 91.7 |
MS.gene08490.t1 | AT5G09330 | 45.192 | 104 | 49 | 3 | 6 | 103 | 55 | 156 | 2.20e-20 | 91.7 |
MS.gene08490.t1 | AT5G09330 | 45.192 | 104 | 49 | 3 | 6 | 103 | 55 | 156 | 2.20e-20 | 91.7 |
MS.gene08490.t1 | AT5G09330 | 45.192 | 104 | 49 | 3 | 6 | 103 | 55 | 156 | 2.20e-20 | 91.7 |
MS.gene08490.t1 | AT3G04070 | 56.000 | 75 | 29 | 2 | 14 | 84 | 65 | 139 | 3.52e-20 | 90.1 |
MS.gene08490.t1 | AT5G66300 | 45.192 | 104 | 50 | 3 | 5 | 103 | 61 | 162 | 3.65e-20 | 89.0 |
MS.gene08490.t1 | AT3G15170 | 55.844 | 77 | 33 | 1 | 9 | 84 | 70 | 146 | 3.67e-20 | 89.4 |
MS.gene08490.t1 | AT1G69490 | 48.000 | 100 | 40 | 5 | 14 | 103 | 64 | 161 | 4.02e-20 | 88.6 |
MS.gene08490.t1 | AT1G34190 | 44.444 | 108 | 46 | 4 | 6 | 104 | 65 | 167 | 4.13e-20 | 91.3 |
MS.gene08490.t1 | AT2G17040 | 44.860 | 107 | 51 | 3 | 14 | 112 | 61 | 167 | 8.84e-20 | 87.8 |
MS.gene08490.t1 | AT4G10350 | 43.810 | 105 | 51 | 3 | 5 | 103 | 11 | 113 | 9.02e-20 | 88.2 |
MS.gene08490.t1 | AT5G53950 | 57.143 | 77 | 32 | 1 | 9 | 84 | 67 | 143 | 9.35e-20 | 89.4 |
MS.gene08490.t1 | AT4G10350 | 43.810 | 105 | 51 | 3 | 5 | 103 | 58 | 160 | 1.54e-19 | 88.2 |
MS.gene08490.t1 | AT1G34180 | 51.190 | 84 | 37 | 3 | 2 | 83 | 72 | 153 | 1.75e-19 | 89.0 |
MS.gene08490.t1 | AT3G12977 | 38.525 | 122 | 66 | 3 | 14 | 128 | 20 | 139 | 1.84e-19 | 85.9 |
MS.gene08490.t1 | AT1G33280 | 44.118 | 102 | 52 | 3 | 5 | 103 | 57 | 156 | 2.04e-19 | 87.4 |
MS.gene08490.t1 | AT1G34180 | 51.190 | 84 | 37 | 3 | 2 | 83 | 72 | 153 | 2.24e-19 | 89.0 |
MS.gene08490.t1 | AT5G39610 | 44.660 | 103 | 47 | 4 | 9 | 103 | 70 | 170 | 3.48e-19 | 86.3 |
MS.gene08490.t1 | AT1G34180 | 51.250 | 80 | 36 | 2 | 5 | 83 | 64 | 141 | 3.51e-19 | 88.2 |
MS.gene08490.t1 | AT1G26870 | 36.301 | 146 | 64 | 4 | 14 | 130 | 71 | 216 | 3.99e-19 | 87.8 |
MS.gene08490.t1 | AT1G61110 | 40.741 | 135 | 73 | 4 | 14 | 147 | 71 | 199 | 4.08e-19 | 86.7 |
MS.gene08490.t1 | AT5G61430 | 43.396 | 106 | 50 | 4 | 7 | 104 | 1 | 104 | 4.28e-19 | 85.9 |
MS.gene08490.t1 | AT1G34180 | 51.250 | 80 | 36 | 2 | 5 | 83 | 64 | 141 | 4.65e-19 | 88.2 |
MS.gene08490.t1 | AT1G56010 | 40.708 | 113 | 49 | 4 | 14 | 117 | 8 | 111 | 5.98e-19 | 85.1 |
MS.gene08490.t1 | AT4G28530 | 43.000 | 100 | 55 | 2 | 7 | 104 | 74 | 173 | 6.18e-19 | 86.7 |
MS.gene08490.t1 | AT5G07680 | 45.631 | 103 | 46 | 4 | 9 | 103 | 67 | 167 | 6.86e-19 | 86.3 |
MS.gene08490.t1 | AT5G07680 | 45.631 | 103 | 46 | 4 | 9 | 103 | 53 | 153 | 7.03e-19 | 85.9 |
MS.gene08490.t1 | AT5G61430 | 43.396 | 106 | 50 | 4 | 7 | 104 | 64 | 167 | 7.33e-19 | 86.3 |
MS.gene08490.t1 | AT3G12977 | 38.525 | 122 | 66 | 3 | 14 | 128 | 73 | 192 | 7.41e-19 | 85.1 |
MS.gene08490.t1 | AT2G27300 | 37.879 | 132 | 73 | 5 | 6 | 133 | 63 | 189 | 7.47e-19 | 86.3 |
MS.gene08490.t1 | AT5G22290 | 44.660 | 103 | 48 | 5 | 6 | 105 | 70 | 166 | 8.18e-19 | 86.3 |
MS.gene08490.t1 | AT3G29035 | 54.545 | 77 | 32 | 3 | 9 | 84 | 74 | 148 | 8.44e-19 | 85.9 |
MS.gene08490.t1 | AT5G62380 | 43.269 | 104 | 51 | 4 | 5 | 103 | 56 | 156 | 8.52e-19 | 86.3 |
MS.gene08490.t1 | AT5G62380 | 43.269 | 104 | 51 | 4 | 5 | 103 | 56 | 156 | 8.52e-19 | 86.3 |
MS.gene08490.t1 | AT2G33480 | 45.918 | 98 | 45 | 3 | 12 | 103 | 8 | 103 | 8.69e-19 | 83.6 |
MS.gene08490.t1 | AT2G18060 | 44.231 | 104 | 50 | 4 | 5 | 103 | 58 | 158 | 1.05e-18 | 85.9 |
MS.gene08490.t1 | AT2G18060 | 44.231 | 104 | 50 | 4 | 5 | 103 | 58 | 158 | 1.05e-18 | 85.9 |
MS.gene08490.t1 | AT1G56010 | 40.708 | 113 | 49 | 4 | 14 | 117 | 75 | 178 | 1.25e-18 | 85.5 |
MS.gene08490.t1 | AT3G44290 | 44.554 | 101 | 50 | 4 | 6 | 105 | 63 | 158 | 1.80e-18 | 83.2 |
MS.gene08490.t1 | AT2G33480 | 46.875 | 96 | 43 | 3 | 14 | 103 | 67 | 160 | 1.85e-18 | 84.0 |
MS.gene08490.t1 | AT5G39820 | 47.561 | 82 | 42 | 1 | 14 | 94 | 75 | 156 | 1.90e-18 | 85.1 |
MS.gene08490.t1 | AT3G04060 | 44.762 | 105 | 49 | 4 | 7 | 103 | 68 | 171 | 1.96e-18 | 85.1 |
MS.gene08490.t1 | AT2G02450 | 46.809 | 94 | 45 | 3 | 14 | 103 | 106 | 198 | 2.08e-18 | 85.5 |
MS.gene08490.t1 | AT1G79580 | 42.857 | 105 | 50 | 4 | 5 | 103 | 66 | 166 | 2.11e-18 | 85.1 |
MS.gene08490.t1 | AT1G79580 | 42.857 | 105 | 50 | 4 | 5 | 103 | 66 | 166 | 2.11e-18 | 85.1 |
MS.gene08490.t1 | AT1G79580 | 42.857 | 105 | 50 | 4 | 5 | 103 | 66 | 166 | 2.11e-18 | 85.1 |
MS.gene08490.t1 | AT1G79580 | 42.857 | 105 | 50 | 4 | 5 | 103 | 66 | 166 | 2.11e-18 | 85.1 |
MS.gene08490.t1 | AT1G79580 | 42.857 | 105 | 50 | 4 | 5 | 103 | 66 | 166 | 2.11e-18 | 85.1 |
MS.gene08490.t1 | AT4G36160 | 42.857 | 105 | 52 | 4 | 4 | 103 | 58 | 159 | 2.32e-18 | 85.1 |
MS.gene08490.t1 | AT4G36160 | 42.857 | 105 | 52 | 4 | 4 | 103 | 58 | 159 | 2.32e-18 | 85.1 |
MS.gene08490.t1 | AT4G36160 | 42.857 | 105 | 52 | 4 | 4 | 103 | 62 | 163 | 2.41e-18 | 85.1 |
MS.gene08490.t1 | AT2G02450 | 46.809 | 94 | 45 | 3 | 14 | 103 | 106 | 198 | 2.67e-18 | 85.5 |
MS.gene08490.t1 | AT5G13180 | 42.105 | 95 | 50 | 2 | 14 | 103 | 66 | 160 | 3.00e-18 | 83.2 |
MS.gene08490.t1 | AT2G33480 | 47.423 | 97 | 39 | 4 | 14 | 103 | 67 | 158 | 3.60e-18 | 83.2 |
MS.gene08490.t1 | AT5G64060 | 41.121 | 107 | 49 | 4 | 6 | 103 | 55 | 156 | 5.13e-18 | 84.0 |
MS.gene08490.t1 | AT3G44290 | 44.554 | 101 | 50 | 4 | 6 | 105 | 63 | 158 | 9.26e-18 | 83.2 |
MS.gene08490.t1 | AT5G18270 | 51.948 | 77 | 35 | 2 | 9 | 84 | 71 | 146 | 2.01e-17 | 82.0 |
MS.gene08490.t1 | AT5G18270 | 51.948 | 77 | 35 | 2 | 9 | 84 | 71 | 146 | 2.05e-17 | 82.0 |
MS.gene08490.t1 | AT2G46770 | 38.843 | 121 | 47 | 4 | 5 | 103 | 65 | 180 | 3.02e-17 | 82.0 |
MS.gene08490.t1 | AT3G61910 | 34.177 | 158 | 76 | 6 | 5 | 143 | 60 | 208 | 8.22e-17 | 80.1 |
MS.gene08490.t1 | AT1G52880 | 43.860 | 114 | 42 | 4 | 14 | 108 | 72 | 182 | 2.22e-16 | 79.0 |
MS.gene08490.t1 | AT1G32770 | 32.530 | 166 | 79 | 7 | 5 | 144 | 65 | 223 | 7.47e-16 | 77.8 |
MS.gene08490.t1 | AT2G43000 | 43.878 | 98 | 46 | 4 | 14 | 104 | 73 | 168 | 1.14e-15 | 76.3 |
MS.gene08490.t1 | AT1G02230 | 39.806 | 103 | 58 | 3 | 6 | 106 | 54 | 154 | 1.42e-15 | 77.0 |
MS.gene08490.t1 | AT5G04395 | 43.678 | 87 | 47 | 2 | 7 | 91 | 89 | 175 | 1.68e-15 | 73.9 |
MS.gene08490.t1 | AT3G12910 | 38.261 | 115 | 52 | 3 | 9 | 104 | 72 | 186 | 1.93e-15 | 75.9 |
MS.gene08490.t1 | AT1G32870 | 41.121 | 107 | 51 | 4 | 6 | 104 | 59 | 161 | 6.58e-15 | 75.5 |
MS.gene08490.t1 | AT1G32870 | 41.121 | 107 | 51 | 4 | 6 | 104 | 59 | 161 | 7.28e-15 | 75.5 |
MS.gene08490.t1 | AT1G32870 | 41.121 | 107 | 51 | 4 | 6 | 104 | 95 | 197 | 8.49e-15 | 75.5 |
MS.gene08490.t1 | AT5G22380 | 40.000 | 100 | 51 | 3 | 9 | 100 | 61 | 159 | 1.11e-14 | 72.8 |
MS.gene08490.t1 | AT3G10490 | 45.000 | 80 | 35 | 3 | 31 | 103 | 1 | 78 | 7.41e-14 | 71.6 |
MS.gene08490.t1 | AT3G10490 | 45.000 | 80 | 35 | 3 | 31 | 103 | 1 | 78 | 7.41e-14 | 71.6 |
MS.gene08490.t1 | AT1G02250 | 37.500 | 104 | 61 | 3 | 6 | 107 | 54 | 155 | 9.23e-14 | 71.6 |
MS.gene08490.t1 | AT3G44350 | 37.864 | 103 | 56 | 3 | 9 | 104 | 60 | 161 | 1.16e-13 | 70.1 |
MS.gene08490.t1 | AT3G04420 | 38.384 | 99 | 58 | 3 | 8 | 105 | 56 | 152 | 2.54e-13 | 69.7 |
MS.gene08490.t1 | AT3G04420 | 38.614 | 101 | 59 | 3 | 6 | 105 | 54 | 152 | 3.03e-13 | 70.1 |
MS.gene08490.t1 | AT1G01010 | 39.423 | 104 | 54 | 3 | 9 | 105 | 57 | 158 | 6.18e-13 | 69.3 |
MS.gene08490.t1 | AT1G02220 | 37.500 | 96 | 56 | 2 | 6 | 101 | 54 | 145 | 6.52e-13 | 69.3 |
MS.gene08490.t1 | AT3G44350 | 43.038 | 79 | 43 | 2 | 9 | 86 | 60 | 137 | 1.02e-12 | 65.5 |
MS.gene08490.t1 | AT2G43000 | 29.070 | 172 | 105 | 6 | 21 | 177 | 2 | 171 | 1.37e-12 | 66.2 |
Find 54 sgRNAs with CRISPR-Local
Find 97 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATCATTTCGAGATGATTTC+GGG | 0.227385 | 8.2:-72134368 | MS.gene08490:CDS |
GAATATGGAACCAATGTTTC+AGG | 0.255948 | 8.2:-72134894 | MS.gene08490:CDS |
ACAAATACGCAAATAGTAAA+AGG | 0.269504 | 8.2:-72135425 | MS.gene08490:CDS |
GCATCATTTCGAGATGATTT+CGG | 0.275502 | 8.2:-72134369 | MS.gene08490:CDS |
AGAGGTACAAACAATGTTAT+TGG | 0.278639 | 8.2:-72135339 | MS.gene08490:CDS |
TGGTCTTGACCGTAAGATTA+AGG | 0.284539 | 8.2:-72135364 | MS.gene08490:CDS |
TTTACAGTGTGGCAATGTTC+TGG | 0.292487 | 8.2:-72134439 | MS.gene08490:intron |
AAAACGCTTGTGTACTATAA+TGG | 0.344581 | 8.2:-72135309 | MS.gene08490:CDS |
CTCCTGGTGTTAAAAGCAAC+TGG | 0.345111 | 8.2:-72135281 | MS.gene08490:CDS |
TACTATAATGGTTGTGCTCC+TGG | 0.345726 | 8.2:-72135297 | MS.gene08490:CDS |
TTTCTTGAACATCCTAGTTC+AGG | 0.346685 | 8.2:-72134402 | MS.gene08490:CDS |
GAGGTACAAACAATGTTATT+GGG | 0.353644 | 8.2:-72135338 | MS.gene08490:CDS |
GACATGAAGGTGGCTGGTCT+TGG | 0.374690 | 8.2:+72134231 | None:intergenic |
CATATCGATGTGTCCACTTT+CGG | 0.387067 | 8.2:+72134769 | None:intergenic |
TGGCTGGTCTTGGATGATAC+TGG | 0.427061 | 8.2:+72134241 | None:intergenic |
GAAGGACACAGTGTGGATAC+TGG | 0.428296 | 8.2:-72135395 | MS.gene08490:CDS |
TACCTCTAACCTTAATCTTA+CGG | 0.431946 | 8.2:+72135355 | None:intergenic |
TCGTTGAGAATGATCTACTA+TGG | 0.438845 | 8.2:-72134622 | MS.gene08490:CDS |
TGATGAGGTTCCTGAAACAT+TGG | 0.440724 | 8.2:+72134884 | None:intergenic |
GACCGTAAGATTAAGGTTAG+AGG | 0.442904 | 8.2:-72135357 | MS.gene08490:CDS |
TTGTTTCTTCTTAGAGTGGA+AGG | 0.456022 | 8.2:+72134267 | None:intergenic |
AATGTTTCAGGAACCTCATC+AGG | 0.458637 | 8.2:-72134882 | MS.gene08490:CDS |
TCGGAACTCATGTGTTTACT+TGG | 0.464802 | 8.2:+72135040 | None:intergenic |
TCCTCGTCAATAGTTTCAAA+CGG | 0.474217 | 8.2:+72134740 | None:intergenic |
GAAAATCAAGAAGCAGTTGA+AGG | 0.489171 | 8.2:-72135013 | MS.gene08490:CDS |
GCATAGTATTCTCCTGAACT+AGG | 0.503449 | 8.2:+72134390 | None:intergenic |
TTCAATATCTGAAAATGAGA+TGG | 0.506271 | 8.2:-72134825 | MS.gene08490:CDS |
GAAGACTGGTCTGTTGAGAA+AGG | 0.518496 | 8.2:+72134845 | None:intergenic |
GATAGAATGATATGTGATGA+AGG | 0.532647 | 8.2:-72135067 | MS.gene08490:CDS |
GAAGTATCTTTATCGAACTC+AGG | 0.533769 | 8.2:-72134803 | MS.gene08490:CDS |
TAGAATGATATGTGATGAAG+GGG | 0.540119 | 8.2:-72135065 | MS.gene08490:CDS |
ATAGAATGATATGTGATGAA+GGG | 0.555622 | 8.2:-72135066 | MS.gene08490:CDS |
ACAAACCTGGTTATCATCAA+AGG | 0.564326 | 8.2:+72135233 | None:intergenic |
CTCGACTGCAGATAAACCTC+GGG | 0.565331 | 8.2:-72134322 | MS.gene08490:CDS |
TACCACCTTTGATGATAACC+AGG | 0.567592 | 8.2:-72135238 | MS.gene08490:intron |
ATCAATTCGATGTTAAATGA+CGG | 0.567730 | 8.2:-72134707 | MS.gene08490:CDS |
ATAGTAAAAGGTTTAACAGA+AGG | 0.579914 | 8.2:-72135413 | MS.gene08490:CDS |
CAATGTTCTGGATACTTCAA+CGG | 0.597908 | 8.2:-72134427 | MS.gene08490:CDS |
TGTGGATACTGGAAAGCCAC+TGG | 0.602459 | 8.2:-72135384 | MS.gene08490:CDS |
ATCTGCAGTCGAGTCACAAG+AGG | 0.603959 | 8.2:+72134332 | None:intergenic |
TCCTGGTGTTAAAAGCAACT+GGG | 0.605841 | 8.2:-72135280 | MS.gene08490:CDS |
AATCTTACGGTCAAGACCAG+TGG | 0.626820 | 8.2:+72135368 | None:intergenic |
ACTCGACTGCAGATAAACCT+CGG | 0.628338 | 8.2:-72134323 | MS.gene08490:CDS |
TCCGTTTGAAACTATTGACG+AGG | 0.648885 | 8.2:-72134741 | MS.gene08490:CDS |
TAAAATCCGATGATCCCGAA+TGG | 0.649145 | 8.2:-72135470 | MS.gene08490:CDS |
ATCATTTCGAGATGATTTCG+GGG | 0.650121 | 8.2:-72134367 | MS.gene08490:CDS |
AACCTGGTTATCATCAAAGG+TGG | 0.663139 | 8.2:+72135236 | None:intergenic |
GAATGATATGTGATGAAGGG+GGG | 0.665909 | 8.2:-72135063 | MS.gene08490:CDS |
TCATTTCGAGATGATTTCGG+GGG | 0.671935 | 8.2:-72134366 | MS.gene08490:CDS |
GTAGATCATTCTCAACGACT+CGG | 0.673640 | 8.2:+72134627 | None:intergenic |
TTTGCGTATTTGTAATCACG+AGG | 0.676971 | 8.2:+72135435 | None:intergenic |
ACACAATTGATCATCTCCCG+AGG | 0.677154 | 8.2:+72134306 | None:intergenic |
TTTAACAGAAGGACACAGTG+TGG | 0.694289 | 8.2:-72135402 | MS.gene08490:CDS |
AGAATGATATGTGATGAAGG+GGG | 0.758539 | 8.2:-72135064 | MS.gene08490:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGTATCAAAGAAAATATTTA+CGG | + | chr8.2:72135226-72135245 | None:intergenic | 15.0% |
!!! | TTTTACGAAAAAATAATGAT+GGG | + | chr8.2:72134250-72134269 | None:intergenic | 15.0% |
!!! | TTTTTACGAAAAAATAATGA+TGG | + | chr8.2:72134251-72134270 | None:intergenic | 15.0% |
!! | GTATCAAAGAAAATATTTAC+GGG | + | chr8.2:72135225-72135244 | None:intergenic | 20.0% |
!! | TTTACGAAAAAATAATGATG+GGG | + | chr8.2:72134249-72134268 | None:intergenic | 20.0% |
! | ACAAATACGCAAATAGTAAA+AGG | - | chr8.2:72134362-72134381 | MS.gene08490:CDS | 25.0% |
! | ATAGAATGATATGTGATGAA+GGG | - | chr8.2:72134721-72134740 | MS.gene08490:CDS | 25.0% |
! | ATAGTAAAAGGTTTAACAGA+AGG | - | chr8.2:72134374-72134393 | MS.gene08490:CDS | 25.0% |
! | ATCAATTCGATGTTAAATGA+CGG | - | chr8.2:72135080-72135099 | MS.gene08490:CDS | 25.0% |
! | ATGTTTCAACTTTATGAGTA+TGG | - | chr8.2:72134589-72134608 | MS.gene08490:CDS | 25.0% |
! | TTCAATATCTGAAAATGAGA+TGG | - | chr8.2:72134962-72134981 | MS.gene08490:intron | 25.0% |
!!! | AGGATAATCAACATTTTTTC+CGG | + | chr8.2:72134626-72134645 | None:intergenic | 25.0% |
!!! | TCTTCTAAAATTTTACAGTG+TGG | - | chr8.2:72135337-72135356 | MS.gene08490:CDS | 25.0% |
AAAACGCTTGTGTACTATAA+TGG | - | chr8.2:72134478-72134497 | MS.gene08490:intron | 30.0% | |
AAGCATGTTTCATGTAAGAA+AGG | + | chr8.2:72134872-72134891 | None:intergenic | 30.0% | |
AGGACTAAAGAAAAACCATT+CGG | + | chr8.2:72134335-72134354 | None:intergenic | 30.0% | |
CATGAAACATGCTTAGAATA+TGG | - | chr8.2:72134878-72134897 | MS.gene08490:CDS | 30.0% | |
CATTCTAGTAGCATTTCAAA+AGG | + | chr8.2:72135297-72135316 | None:intergenic | 30.0% | |
GAGGTACAAACAATGTTATT+GGG | - | chr8.2:72134449-72134468 | MS.gene08490:intron | 30.0% | |
GATAGAATGATATGTGATGA+AGG | - | chr8.2:72134720-72134739 | MS.gene08490:CDS | 30.0% | |
TACCTCTAACCTTAATCTTA+CGG | + | chr8.2:72134435-72134454 | None:intergenic | 30.0% | |
TAGAATGATATGTGATGAAG+GGG | - | chr8.2:72134722-72134741 | MS.gene08490:CDS | 30.0% | |
TTGAAGGAATTCTTGATGTA+AGG | - | chr8.2:72134790-72134809 | MS.gene08490:CDS | 30.0% | |
TTGTTGTAACAAAACAAACC+TGG | + | chr8.2:72134570-72134589 | None:intergenic | 30.0% | |
! | AAAAGAAGACACACTTTTGT+CGG | - | chr8.2:72135122-72135141 | MS.gene08490:CDS | 30.0% |
! | AAAAGTCCTCTACGAAATTT+TGG | + | chr8.2:72134649-72134668 | None:intergenic | 30.0% |
! | AGAGGTACAAACAATGTTAT+TGG | - | chr8.2:72134448-72134467 | MS.gene08490:intron | 30.0% |
! | CATTTTCAGATATTGAAGAC+TGG | + | chr8.2:72134959-72134978 | None:intergenic | 30.0% |
!! | GTTTTTGTTTCTTCTTAGAG+TGG | + | chr8.2:72135527-72135546 | None:intergenic | 30.0% |
!!! | CTTTTGAAATGCTACTAGAA+TGG | - | chr8.2:72135295-72135314 | MS.gene08490:CDS | 30.0% |
!!! | TGAGAAAGGAAAGTACTTTT+CGG | + | chr8.2:72134931-72134950 | None:intergenic | 30.0% |
ACAAACCTGGTTATCATCAA+AGG | + | chr8.2:72134557-72134576 | None:intergenic | 35.0% | |
AGAATGATATGTGATGAAGG+GGG | - | chr8.2:72134723-72134742 | MS.gene08490:CDS | 35.0% | |
ATCATTTCGAGATGATTTCG+GGG | - | chr8.2:72135420-72135439 | MS.gene08490:CDS | 35.0% | |
ATGTTTGCAAGTTTGAACCT+TGG | - | chr8.2:72134197-72134216 | MS.gene08490:CDS | 35.0% | |
CATCATTTCGAGATGATTTC+GGG | - | chr8.2:72135419-72135438 | MS.gene08490:CDS | 35.0% | |
GAAAATCAAGAAGCAGTTGA+AGG | - | chr8.2:72134774-72134793 | MS.gene08490:CDS | 35.0% | |
GAATATGGAACCAATGTTTC+AGG | - | chr8.2:72134893-72134912 | MS.gene08490:CDS | 35.0% | |
GCATCATTTCGAGATGATTT+CGG | - | chr8.2:72135418-72135437 | MS.gene08490:CDS | 35.0% | |
GGACTAAAGAAAAACCATTC+GGG | + | chr8.2:72134334-72134353 | None:intergenic | 35.0% | |
TATCCTCCAAAATTTCGTAG+AGG | - | chr8.2:72134640-72134659 | MS.gene08490:intron | 35.0% | |
TCCTCGTCAATAGTTTCAAA+CGG | + | chr8.2:72135050-72135069 | None:intergenic | 35.0% | |
TCGTTGAGAATGATCTACTA+TGG | - | chr8.2:72135165-72135184 | MS.gene08490:intron | 35.0% | |
TGTTTGCAAGTTTGAACCTT+GGG | - | chr8.2:72134198-72134217 | MS.gene08490:CDS | 35.0% | |
TTTCTTGAACATCCTAGTTC+AGG | - | chr8.2:72135385-72135404 | MS.gene08490:CDS | 35.0% | |
TTTGCGTATTTGTAATCACG+AGG | + | chr8.2:72134355-72134374 | None:intergenic | 35.0% | |
! | CAATGTTCTGGATACTTCAA+CGG | - | chr8.2:72135360-72135379 | MS.gene08490:CDS | 35.0% |
! | GAAGTATCTTTATCGAACTC+AGG | - | chr8.2:72134984-72135003 | MS.gene08490:intron | 35.0% |
! | GAGTATGGTATGAGTTTTTC+CGG | - | chr8.2:72134604-72134623 | MS.gene08490:CDS | 35.0% |
! | GCTTTATTCATACTGTGATG+TGG | - | chr8.2:72135258-72135277 | MS.gene08490:CDS | 35.0% |
! | GGATTTTATGATTCCGAAAG+TGG | - | chr8.2:72135005-72135024 | MS.gene08490:CDS | 35.0% |
! | GGGTTTGTTTGATATTTACC+TGG | + | chr8.2:72134229-72134248 | None:intergenic | 35.0% |
! | TTGTTTCTTCTTAGAGTGGA+AGG | + | chr8.2:72135523-72135542 | None:intergenic | 35.0% |
!!! | TTCCTCTTCAGCTTTTTTCT+CGG | + | chr8.2:72134697-72134716 | None:intergenic | 35.0% |
AACCTGGTTATCATCAAAGG+TGG | + | chr8.2:72134554-72134573 | None:intergenic | 40.0% | |
AATGTTTCAGGAACCTCATC+AGG | - | chr8.2:72134905-72134924 | MS.gene08490:intron | 40.0% | |
CATATCGATGTGTCCACTTT+CGG | + | chr8.2:72135021-72135040 | None:intergenic | 40.0% | |
GAAAAACCATTCGGGATCAT+CGG | + | chr8.2:72134326-72134345 | None:intergenic | 40.0% | |
GAATGATATGTGATGAAGGG+GGG | - | chr8.2:72134724-72134743 | MS.gene08490:CDS | 40.0% | |
GACCGTAAGATTAAGGTTAG+AGG | - | chr8.2:72134430-72134449 | MS.gene08490:CDS | 40.0% | |
GCATAGTATTCTCCTGAACT+AGG | + | chr8.2:72135400-72135419 | None:intergenic | 40.0% | |
GTAGATCATTCTCAACGACT+CGG | + | chr8.2:72135163-72135182 | None:intergenic | 40.0% | |
TAAAATCCGATGATCCCGAA+TGG | - | chr8.2:72134317-72134336 | MS.gene08490:CDS | 40.0% | |
TACTATAATGGTTGTGCTCC+TGG | - | chr8.2:72134490-72134509 | MS.gene08490:intron | 40.0% | |
TATTTACCTGGTAAGTCCCA+AGG | + | chr8.2:72134217-72134236 | None:intergenic | 40.0% | |
TCATTTCGAGATGATTTCGG+GGG | - | chr8.2:72135421-72135440 | MS.gene08490:CDS | 40.0% | |
TCGGAACTCATGTGTTTACT+TGG | + | chr8.2:72134750-72134769 | None:intergenic | 40.0% | |
TGATGAGGTTCCTGAAACAT+TGG | + | chr8.2:72134906-72134925 | None:intergenic | 40.0% | |
TTTAACAGAAGGACACAGTG+TGG | - | chr8.2:72134385-72134404 | MS.gene08490:CDS | 40.0% | |
TTTACAGTGTGGCAATGTTC+TGG | - | chr8.2:72135348-72135367 | MS.gene08490:CDS | 40.0% | |
! | AGCAGCTCTTTTTGACATGA+AGG | + | chr8.2:72135572-72135591 | None:intergenic | 40.0% |
! | AGCTCTTTTTGACATGAAGG+TGG | + | chr8.2:72135569-72135588 | None:intergenic | 40.0% |
! | AGTCCTCTACGAAATTTTGG+AGG | + | chr8.2:72134646-72134665 | None:intergenic | 40.0% |
! | TACCACCTTTGATGATAACC+AGG | - | chr8.2:72134549-72134568 | MS.gene08490:intron | 40.0% |
! | TCCGTTTGAAACTATTGACG+AGG | - | chr8.2:72135046-72135065 | MS.gene08490:CDS | 40.0% |
! | TCCTGGTGTTAAAAGCAACT+GGG | - | chr8.2:72134507-72134526 | MS.gene08490:intron | 40.0% |
! | TGCTTCTTGATTTTCGCGAT+CGG | + | chr8.2:72134769-72134788 | None:intergenic | 40.0% |
! | TGGTCTTGACCGTAAGATTA+AGG | - | chr8.2:72134423-72134442 | MS.gene08490:CDS | 40.0% |
AATCTTACGGTCAAGACCAG+TGG | + | chr8.2:72134422-72134441 | None:intergenic | 45.0% | |
ACACAATTGATCATCTCCCG+AGG | + | chr8.2:72135484-72135503 | None:intergenic | 45.0% | |
ACTCGACTGCAGATAAACCT+CGG | - | chr8.2:72135464-72135483 | MS.gene08490:CDS | 45.0% | |
AGATGATTTCGGGGGATTTG+AGG | - | chr8.2:72135429-72135448 | MS.gene08490:CDS | 45.0% | |
AGCCGAGAAAAAAGCTGAAG+AGG | - | chr8.2:72134692-72134711 | MS.gene08490:intron | 45.0% | |
TTTGAACCTTGGGACTTACC+AGG | - | chr8.2:72134208-72134227 | MS.gene08490:CDS | 45.0% | |
! | AAGTACTTTTCGGCCTGATG+AGG | + | chr8.2:72134921-72134940 | None:intergenic | 45.0% |
! | CTCCTGGTGTTAAAAGCAAC+TGG | - | chr8.2:72134506-72134525 | MS.gene08490:intron | 45.0% |
! | CTTTTTGACATGAAGGTGGC+TGG | + | chr8.2:72135565-72135584 | None:intergenic | 45.0% |
!! | GAAGACTGGTCTGTTGAGAA+AGG | + | chr8.2:72134945-72134964 | None:intergenic | 45.0% |
!!! | ACCCAGTTGCTTTTAACACC+AGG | + | chr8.2:72134511-72134530 | None:intergenic | 45.0% |
ATCTGCAGTCGAGTCACAAG+AGG | + | chr8.2:72135458-72135477 | None:intergenic | 50.0% | |
CTCGACTGCAGATAAACCTC+GGG | - | chr8.2:72135465-72135484 | MS.gene08490:CDS | 50.0% | |
GAAGGACACAGTGTGGATAC+TGG | - | chr8.2:72134392-72134411 | MS.gene08490:CDS | 50.0% | |
TGTGGATACTGGAAAGCCAC+TGG | - | chr8.2:72134403-72134422 | MS.gene08490:CDS | 50.0% | |
! | TCATTCTCAACGACTCGGAC+TGG | + | chr8.2:72135158-72135177 | None:intergenic | 50.0% |
!! | TGGCTGGTCTTGGATGATAC+TGG | + | chr8.2:72135549-72135568 | None:intergenic | 50.0% |
!! | GACATGAAGGTGGCTGGTCT+TGG | + | chr8.2:72135559-72135578 | None:intergenic | 55.0% |
! | CTCAACGACTCGGACTGGAC+AGG | + | chr8.2:72135153-72135172 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 72134197 | 72135612 | 72134197 | ID=MS.gene08490 |
chr8.2 | mRNA | 72134197 | 72135612 | 72134197 | ID=MS.gene08490.t1;Parent=MS.gene08490 |
chr8.2 | exon | 72135603 | 72135612 | 72135603 | ID=MS.gene08490.t1.exon1;Parent=MS.gene08490.t1 |
chr8.2 | CDS | 72135603 | 72135612 | 72135603 | ID=cds.MS.gene08490.t1;Parent=MS.gene08490.t1 |
chr8.2 | exon | 72135239 | 72135504 | 72135239 | ID=MS.gene08490.t1.exon2;Parent=MS.gene08490.t1 |
chr8.2 | CDS | 72135239 | 72135504 | 72135239 | ID=cds.MS.gene08490.t1;Parent=MS.gene08490.t1 |
chr8.2 | exon | 72135003 | 72135149 | 72135003 | ID=MS.gene08490.t1.exon3;Parent=MS.gene08490.t1 |
chr8.2 | CDS | 72135003 | 72135149 | 72135003 | ID=cds.MS.gene08490.t1;Parent=MS.gene08490.t1 |
chr8.2 | exon | 72134700 | 72134915 | 72134700 | ID=MS.gene08490.t1.exon4;Parent=MS.gene08490.t1 |
chr8.2 | CDS | 72134700 | 72134915 | 72134700 | ID=cds.MS.gene08490.t1;Parent=MS.gene08490.t1 |
chr8.2 | exon | 72134585 | 72134650 | 72134585 | ID=MS.gene08490.t1.exon5;Parent=MS.gene08490.t1 |
chr8.2 | CDS | 72134585 | 72134650 | 72134585 | ID=cds.MS.gene08490.t1;Parent=MS.gene08490.t1 |
chr8.2 | exon | 72134197 | 72134454 | 72134197 | ID=MS.gene08490.t1.exon6;Parent=MS.gene08490.t1 |
chr8.2 | CDS | 72134197 | 72134454 | 72134197 | ID=cds.MS.gene08490.t1;Parent=MS.gene08490.t1 |
Gene Sequence |
Protein sequence |