Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08493.t1 | XP_013444514.1 | 87.7 | 405 | 44 | 2 | 1 | 404 | 1 | 400 | 2.70E-202 | 714.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08493.t1 | F4JN35 | 58.9 | 158 | 56 | 4 | 10 | 161 | 9 | 163 | 4.3e-47 | 190.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08493.t1 | G7ZZI3 | 87.7 | 405 | 44 | 2 | 1 | 404 | 1 | 400 | 2.0e-202 | 714.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene08493.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08493.t1 | MTR_8g023840 | 87.654 | 405 | 44 | 2 | 1 | 404 | 1 | 400 | 0.0 | 714 |
MS.gene08493.t1 | MTR_8g023860 | 63.616 | 437 | 106 | 7 | 1 | 402 | 1 | 419 | 0.0 | 516 |
MS.gene08493.t1 | MTR_8g023930 | 65.950 | 279 | 92 | 2 | 8 | 284 | 22 | 299 | 5.08e-128 | 377 |
MS.gene08493.t1 | MTR_8g023900 | 63.605 | 294 | 96 | 3 | 1 | 290 | 184 | 470 | 4.72e-127 | 375 |
MS.gene08493.t1 | MTR_8g023900 | 69.730 | 185 | 52 | 3 | 1 | 181 | 1 | 185 | 4.99e-86 | 270 |
MS.gene08493.t1 | MTR_8g023880 | 42.756 | 283 | 122 | 10 | 10 | 277 | 7 | 264 | 1.73e-56 | 187 |
MS.gene08493.t1 | MTR_3g093040 | 54.651 | 172 | 65 | 6 | 10 | 175 | 108 | 272 | 1.64e-54 | 183 |
MS.gene08493.t1 | MTR_5g069030 | 57.233 | 159 | 59 | 4 | 8 | 160 | 23 | 178 | 1.52e-52 | 185 |
MS.gene08493.t1 | MTR_3g093050 | 55.556 | 162 | 63 | 5 | 8 | 163 | 20 | 178 | 8.48e-52 | 182 |
MS.gene08493.t1 | MTR_3g093050 | 55.556 | 162 | 63 | 5 | 8 | 163 | 20 | 178 | 2.22e-51 | 182 |
MS.gene08493.t1 | MTR_2g086880 | 46.591 | 176 | 87 | 5 | 13 | 187 | 21 | 190 | 5.87e-44 | 160 |
MS.gene08493.t1 | MTR_6g477900 | 51.948 | 154 | 65 | 5 | 10 | 157 | 6 | 156 | 6.60e-44 | 153 |
MS.gene08493.t1 | MTR_2g086880 | 46.591 | 176 | 87 | 5 | 13 | 187 | 21 | 190 | 7.07e-44 | 161 |
MS.gene08493.t1 | MTR_5g014300 | 48.795 | 166 | 72 | 5 | 10 | 165 | 6 | 168 | 6.07e-43 | 153 |
MS.gene08493.t1 | MTR_4g098630 | 36.331 | 278 | 129 | 10 | 10 | 242 | 6 | 280 | 1.81e-42 | 151 |
MS.gene08493.t1 | MTR_3g064580 | 45.274 | 201 | 97 | 7 | 10 | 201 | 6 | 202 | 4.11e-42 | 157 |
MS.gene08493.t1 | MTR_2g064090 | 48.718 | 156 | 70 | 4 | 10 | 158 | 6 | 158 | 4.56e-42 | 151 |
MS.gene08493.t1 | MTR_5g076850 | 50.323 | 155 | 68 | 4 | 10 | 158 | 6 | 157 | 2.47e-41 | 154 |
MS.gene08493.t1 | MTR_2g080010 | 41.379 | 203 | 107 | 7 | 10 | 209 | 15 | 208 | 7.22e-40 | 145 |
MS.gene08493.t1 | MTR_1g090723 | 50.331 | 151 | 68 | 3 | 13 | 158 | 11 | 159 | 1.06e-39 | 149 |
MS.gene08493.t1 | MTR_7g085220 | 39.910 | 223 | 97 | 10 | 6 | 205 | 4 | 212 | 1.50e-39 | 144 |
MS.gene08493.t1 | MTR_1g090723 | 50.331 | 151 | 68 | 3 | 13 | 158 | 11 | 159 | 1.62e-39 | 149 |
MS.gene08493.t1 | MTR_4g089135 | 48.276 | 145 | 71 | 3 | 6 | 149 | 11 | 152 | 2.35e-39 | 144 |
MS.gene08493.t1 | MTR_1g090723 | 49.342 | 152 | 69 | 3 | 13 | 158 | 11 | 160 | 1.01e-38 | 147 |
MS.gene08493.t1 | MTR_3g096140 | 41.799 | 189 | 95 | 7 | 13 | 194 | 10 | 190 | 4.52e-38 | 139 |
MS.gene08493.t1 | MTR_3g109340 | 49.020 | 153 | 71 | 5 | 10 | 158 | 22 | 171 | 2.51e-37 | 139 |
MS.gene08493.t1 | MTR_3g096140 | 41.799 | 189 | 95 | 7 | 13 | 194 | 10 | 190 | 3.25e-37 | 139 |
MS.gene08493.t1 | MTR_3g096920 | 48.125 | 160 | 68 | 6 | 10 | 160 | 7 | 160 | 3.41e-37 | 137 |
MS.gene08493.t1 | MTR_3g070030 | 55.469 | 128 | 51 | 5 | 11 | 137 | 20 | 142 | 7.33e-37 | 137 |
MS.gene08493.t1 | MTR_2157s0010 | 52.308 | 130 | 57 | 4 | 10 | 137 | 8 | 134 | 7.86e-37 | 135 |
MS.gene08493.t1 | MTR_8g063550 | 43.709 | 151 | 76 | 4 | 13 | 157 | 9 | 156 | 8.37e-37 | 137 |
MS.gene08493.t1 | MTR_5g012080 | 45.342 | 161 | 78 | 6 | 3 | 157 | 2 | 158 | 1.35e-36 | 137 |
MS.gene08493.t1 | MTR_4g036030 | 46.584 | 161 | 74 | 7 | 3 | 157 | 2 | 156 | 1.76e-36 | 136 |
MS.gene08493.t1 | MTR_8g063550 | 43.709 | 151 | 76 | 4 | 13 | 157 | 9 | 156 | 1.94e-36 | 138 |
MS.gene08493.t1 | MTR_7g005280 | 43.636 | 165 | 83 | 4 | 10 | 170 | 15 | 173 | 2.47e-36 | 133 |
MS.gene08493.t1 | MTR_3g109340 | 49.351 | 154 | 70 | 6 | 10 | 158 | 22 | 172 | 3.21e-36 | 136 |
MS.gene08493.t1 | MTR_3g088110 | 42.941 | 170 | 82 | 5 | 10 | 170 | 7 | 170 | 6.75e-36 | 133 |
MS.gene08493.t1 | MTR_2g078700 | 53.846 | 130 | 56 | 3 | 9 | 137 | 22 | 148 | 7.05e-36 | 135 |
MS.gene08493.t1 | MTR_8g094580 | 44.242 | 165 | 68 | 6 | 10 | 160 | 7 | 161 | 1.01e-35 | 132 |
MS.gene08493.t1 | MTR_8g467490 | 40.964 | 166 | 80 | 4 | 13 | 163 | 17 | 179 | 1.05e-35 | 135 |
MS.gene08493.t1 | MTR_2g079990 | 46.203 | 158 | 66 | 6 | 10 | 157 | 16 | 164 | 1.08e-35 | 134 |
MS.gene08493.t1 | MTR_8g063550 | 43.709 | 151 | 76 | 4 | 13 | 157 | 9 | 156 | 1.20e-35 | 136 |
MS.gene08493.t1 | MTR_3g435150 | 47.134 | 157 | 70 | 6 | 10 | 158 | 16 | 167 | 1.22e-35 | 133 |
MS.gene08493.t1 | MTR_0036s0150 | 47.742 | 155 | 74 | 3 | 9 | 158 | 4 | 156 | 1.73e-35 | 137 |
MS.gene08493.t1 | MTR_4g108760 | 52.308 | 130 | 56 | 5 | 10 | 138 | 17 | 141 | 2.18e-35 | 134 |
MS.gene08493.t1 | MTR_3g096920 | 51.852 | 135 | 58 | 4 | 10 | 143 | 7 | 135 | 2.29e-35 | 133 |
MS.gene08493.t1 | MTR_6g084430 | 45.342 | 161 | 77 | 6 | 10 | 164 | 5 | 160 | 3.48e-35 | 132 |
MS.gene08493.t1 | MTR_4g035590 | 47.368 | 152 | 73 | 5 | 10 | 157 | 8 | 156 | 5.72e-35 | 132 |
MS.gene08493.t1 | MTR_4g081870 | 45.062 | 162 | 66 | 6 | 10 | 157 | 9 | 161 | 7.00e-35 | 130 |
MS.gene08493.t1 | MTR_7g011130 | 55.906 | 127 | 50 | 5 | 12 | 137 | 21 | 142 | 1.39e-34 | 131 |
MS.gene08493.t1 | MTR_2g093810 | 40.113 | 177 | 95 | 5 | 11 | 186 | 15 | 181 | 1.89e-34 | 130 |
MS.gene08493.t1 | MTR_4g101680 | 44.375 | 160 | 79 | 6 | 3 | 157 | 2 | 156 | 2.15e-34 | 131 |
MS.gene08493.t1 | MTR_6g012670 | 47.712 | 153 | 68 | 5 | 10 | 161 | 20 | 161 | 3.12e-34 | 129 |
MS.gene08493.t1 | MTR_8g099750 | 42.308 | 156 | 74 | 4 | 10 | 154 | 14 | 164 | 3.45e-34 | 127 |
MS.gene08493.t1 | MTR_1g097300 | 52.555 | 137 | 59 | 4 | 13 | 148 | 22 | 153 | 4.22e-34 | 133 |
MS.gene08493.t1 | MTR_8g059170 | 43.713 | 167 | 73 | 6 | 10 | 164 | 14 | 171 | 4.26e-34 | 129 |
MS.gene08493.t1 | MTR_1g008740 | 44.156 | 154 | 79 | 3 | 10 | 158 | 13 | 164 | 4.53e-34 | 130 |
MS.gene08493.t1 | MTR_1g090720 | 47.134 | 157 | 68 | 4 | 13 | 157 | 45 | 198 | 4.97e-34 | 132 |
MS.gene08493.t1 | MTR_1g008740 | 44.156 | 154 | 79 | 3 | 10 | 158 | 27 | 178 | 5.73e-34 | 130 |
MS.gene08493.t1 | MTR_5g040420 | 35.644 | 202 | 113 | 4 | 13 | 200 | 17 | 215 | 5.78e-34 | 130 |
MS.gene08493.t1 | MTR_8g076110 | 43.137 | 153 | 79 | 5 | 10 | 157 | 6 | 155 | 7.42e-34 | 128 |
MS.gene08493.t1 | MTR_2g079990 | 50.388 | 129 | 58 | 4 | 10 | 137 | 16 | 139 | 1.18e-33 | 129 |
MS.gene08493.t1 | MTR_8g093580 | 42.384 | 151 | 78 | 4 | 13 | 157 | 9 | 156 | 1.37e-33 | 131 |
MS.gene08493.t1 | MTR_7g085260 | 49.618 | 131 | 60 | 4 | 10 | 137 | 17 | 144 | 2.19e-33 | 129 |
MS.gene08493.t1 | MTR_7g011120 | 54.688 | 128 | 52 | 5 | 12 | 138 | 10 | 132 | 2.99e-33 | 127 |
MS.gene08493.t1 | MTR_4g134460 | 43.671 | 158 | 77 | 6 | 7 | 158 | 51 | 202 | 3.10e-33 | 129 |
MS.gene08493.t1 | MTR_6g032770 | 48.092 | 131 | 62 | 4 | 10 | 138 | 18 | 144 | 3.16e-33 | 128 |
MS.gene08493.t1 | MTR_5g021710 | 44.805 | 154 | 75 | 6 | 10 | 157 | 8 | 157 | 4.99e-33 | 127 |
MS.gene08493.t1 | MTR_7g100990 | 40.244 | 164 | 83 | 6 | 6 | 157 | 5 | 165 | 5.06e-33 | 126 |
MS.gene08493.t1 | MTR_5g041940 | 42.442 | 172 | 76 | 7 | 10 | 167 | 3 | 165 | 7.20e-33 | 124 |
MS.gene08493.t1 | MTR_1g069805 | 43.421 | 152 | 81 | 4 | 10 | 159 | 10 | 158 | 7.43e-33 | 125 |
MS.gene08493.t1 | MTR_3g116070 | 47.794 | 136 | 66 | 3 | 10 | 142 | 23 | 156 | 8.45e-33 | 126 |
MS.gene08493.t1 | MTR_6g011860 | 41.615 | 161 | 75 | 5 | 13 | 158 | 18 | 174 | 1.05e-32 | 127 |
MS.gene08493.t1 | MTR_2g062730 | 42.197 | 173 | 85 | 7 | 10 | 170 | 10 | 179 | 1.48e-32 | 125 |
MS.gene08493.t1 | MTR_1g096430 | 42.857 | 154 | 78 | 6 | 10 | 157 | 7 | 156 | 2.13e-32 | 125 |
MS.gene08493.t1 | MTR_2g064470 | 40.828 | 169 | 86 | 5 | 10 | 171 | 11 | 172 | 2.86e-32 | 124 |
MS.gene08493.t1 | MTR_4g052620 | 43.590 | 156 | 74 | 5 | 11 | 154 | 6 | 159 | 4.07e-32 | 122 |
MS.gene08493.t1 | MTR_7g097090 | 43.537 | 147 | 78 | 4 | 10 | 154 | 10 | 153 | 4.08e-32 | 123 |
MS.gene08493.t1 | MTR_4g075980 | 42.857 | 168 | 83 | 6 | 13 | 170 | 18 | 182 | 5.54e-32 | 123 |
MS.gene08493.t1 | MTR_2g068920 | 47.727 | 132 | 63 | 5 | 10 | 137 | 20 | 149 | 1.45e-31 | 122 |
MS.gene08493.t1 | MTR_2g068880 | 46.970 | 132 | 64 | 5 | 10 | 137 | 21 | 150 | 2.62e-31 | 121 |
MS.gene08493.t1 | MTR_8g024480 | 40.107 | 187 | 90 | 7 | 10 | 180 | 15 | 195 | 3.11e-30 | 121 |
MS.gene08493.t1 | MTR_3g096140 | 39.205 | 176 | 92 | 7 | 26 | 194 | 2 | 169 | 4.37e-30 | 119 |
MS.gene08493.t1 | MTR_2g086690 | 41.667 | 156 | 78 | 5 | 11 | 154 | 5 | 159 | 1.42e-29 | 115 |
MS.gene08493.t1 | MTR_5g090970 | 47.244 | 127 | 62 | 4 | 13 | 137 | 21 | 144 | 4.31e-29 | 115 |
MS.gene08493.t1 | MTR_5g090970 | 46.457 | 127 | 62 | 4 | 13 | 137 | 21 | 143 | 1.16e-28 | 114 |
MS.gene08493.t1 | MTR_3g098810 | 41.176 | 136 | 72 | 4 | 10 | 142 | 14 | 144 | 5.15e-28 | 108 |
MS.gene08493.t1 | MTR_3g070040 | 51.969 | 127 | 52 | 6 | 12 | 137 | 10 | 128 | 8.49e-28 | 112 |
MS.gene08493.t1 | MTR_3g098810 | 36.310 | 168 | 88 | 5 | 10 | 163 | 14 | 176 | 1.06e-27 | 110 |
MS.gene08493.t1 | MTR_7g105170 | 34.101 | 217 | 114 | 9 | 10 | 203 | 4 | 214 | 7.25e-25 | 102 |
MS.gene08493.t1 | MTR_8g094580 | 43.925 | 107 | 39 | 4 | 68 | 160 | 8 | 107 | 4.43e-20 | 89.0 |
MS.gene08493.t1 | MTR_8g093790 | 33.939 | 165 | 88 | 6 | 10 | 173 | 10 | 154 | 2.01e-18 | 82.8 |
MS.gene08493.t1 | MTR_4g094302 | 34.351 | 131 | 70 | 5 | 10 | 137 | 11 | 128 | 5.15e-17 | 78.2 |
MS.gene08493.t1 | MTR_4g094302 | 28.409 | 176 | 99 | 6 | 10 | 171 | 11 | 173 | 6.26e-17 | 79.0 |
MS.gene08493.t1 | MTR_7g070140 | 41.667 | 84 | 47 | 2 | 56 | 137 | 6 | 89 | 3.09e-16 | 75.5 |
MS.gene08493.t1 | MTR_3g096400 | 34.266 | 143 | 82 | 5 | 10 | 149 | 7 | 140 | 2.79e-15 | 74.7 |
MS.gene08493.t1 | MTR_7g083330 | 30.435 | 161 | 99 | 5 | 10 | 162 | 18 | 173 | 1.61e-14 | 72.0 |
MS.gene08493.t1 | MTR_7g083360 | 33.077 | 130 | 79 | 5 | 10 | 137 | 10 | 133 | 5.70e-12 | 63.9 |
MS.gene08493.t1 | MTR_1g087190 | 54.000 | 50 | 23 | 0 | 9 | 58 | 4 | 53 | 7.62e-11 | 57.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08493.t1 | AT4G35580 | 58.491 | 159 | 57 | 4 | 10 | 162 | 9 | 164 | 2.57e-56 | 193 |
MS.gene08493.t1 | AT4G35580 | 58.491 | 159 | 57 | 4 | 10 | 162 | 9 | 164 | 2.67e-56 | 194 |
MS.gene08493.t1 | AT4G35580 | 58.491 | 159 | 57 | 4 | 10 | 162 | 9 | 164 | 2.83e-56 | 194 |
MS.gene08493.t1 | AT1G33060 | 57.143 | 154 | 57 | 4 | 10 | 157 | 24 | 174 | 1.93e-52 | 185 |
MS.gene08493.t1 | AT1G33060 | 57.143 | 154 | 57 | 4 | 10 | 157 | 24 | 174 | 2.18e-52 | 185 |
MS.gene08493.t1 | AT3G49530 | 53.704 | 162 | 67 | 4 | 10 | 165 | 13 | 172 | 3.31e-52 | 180 |
MS.gene08493.t1 | AT4G01550 | 44.248 | 226 | 107 | 7 | 12 | 235 | 6 | 214 | 4.23e-52 | 181 |
MS.gene08493.t1 | AT3G49530 | 53.704 | 162 | 67 | 4 | 10 | 165 | 13 | 172 | 1.62e-51 | 179 |
MS.gene08493.t1 | AT5G24590 | 53.846 | 156 | 64 | 4 | 10 | 159 | 13 | 166 | 3.22e-50 | 176 |
MS.gene08493.t1 | AT4G17980 | 48.734 | 158 | 72 | 3 | 10 | 159 | 6 | 162 | 2.83e-45 | 157 |
MS.gene08493.t1 | AT4G17980 | 48.734 | 158 | 72 | 3 | 10 | 159 | 6 | 162 | 7.68e-45 | 157 |
MS.gene08493.t1 | AT5G17260 | 50.610 | 164 | 65 | 5 | 10 | 163 | 6 | 163 | 1.08e-44 | 161 |
MS.gene08493.t1 | AT3G17730 | 48.503 | 167 | 77 | 4 | 10 | 170 | 6 | 169 | 1.90e-44 | 154 |
MS.gene08493.t1 | AT4G01520 | 39.013 | 223 | 112 | 7 | 11 | 216 | 5 | 220 | 4.37e-44 | 155 |
MS.gene08493.t1 | AT3G03200 | 50.610 | 164 | 65 | 5 | 10 | 163 | 6 | 163 | 8.94e-44 | 159 |
MS.gene08493.t1 | AT4G01540 | 39.189 | 222 | 111 | 7 | 12 | 216 | 6 | 220 | 8.49e-43 | 154 |
MS.gene08493.t1 | AT4G01540 | 39.189 | 222 | 111 | 7 | 12 | 216 | 6 | 220 | 1.29e-42 | 154 |
MS.gene08493.t1 | AT4G01540 | 39.189 | 222 | 111 | 7 | 12 | 216 | 6 | 220 | 2.38e-42 | 154 |
MS.gene08493.t1 | AT4G01540 | 39.189 | 222 | 111 | 7 | 12 | 216 | 6 | 220 | 3.46e-42 | 154 |
MS.gene08493.t1 | AT5G46590 | 46.707 | 167 | 80 | 4 | 10 | 169 | 6 | 170 | 7.92e-42 | 149 |
MS.gene08493.t1 | AT1G65910 | 50.000 | 164 | 71 | 5 | 10 | 165 | 6 | 166 | 1.11e-40 | 152 |
MS.gene08493.t1 | AT3G10480 | 48.684 | 152 | 68 | 4 | 13 | 157 | 30 | 178 | 3.41e-40 | 149 |
MS.gene08493.t1 | AT1G02230 | 47.771 | 157 | 73 | 5 | 11 | 164 | 4 | 154 | 6.64e-40 | 146 |
MS.gene08493.t1 | AT3G10490 | 48.026 | 152 | 69 | 4 | 13 | 157 | 30 | 178 | 8.29e-40 | 142 |
MS.gene08493.t1 | AT5G46590 | 47.826 | 161 | 78 | 4 | 10 | 166 | 6 | 164 | 1.13e-39 | 143 |
MS.gene08493.t1 | AT5G09330 | 50.993 | 151 | 65 | 4 | 13 | 157 | 9 | 156 | 1.64e-39 | 147 |
MS.gene08493.t1 | AT5G09330 | 50.993 | 151 | 65 | 4 | 13 | 157 | 9 | 156 | 1.64e-39 | 147 |
MS.gene08493.t1 | AT5G09330 | 50.993 | 151 | 65 | 4 | 13 | 157 | 9 | 156 | 1.64e-39 | 147 |
MS.gene08493.t1 | AT5G09330 | 50.993 | 151 | 65 | 4 | 13 | 157 | 9 | 156 | 1.64e-39 | 147 |
MS.gene08493.t1 | AT5G09330 | 50.993 | 151 | 65 | 4 | 13 | 157 | 9 | 156 | 1.64e-39 | 147 |
MS.gene08493.t1 | AT3G10480 | 48.344 | 151 | 69 | 4 | 13 | 157 | 30 | 177 | 1.65e-39 | 147 |
MS.gene08493.t1 | AT3G10490 | 48.026 | 152 | 69 | 4 | 13 | 157 | 30 | 178 | 6.80e-39 | 145 |
MS.gene08493.t1 | AT2G27300 | 45.783 | 166 | 80 | 6 | 13 | 174 | 17 | 176 | 1.82e-38 | 141 |
MS.gene08493.t1 | AT5G64060 | 48.052 | 154 | 65 | 5 | 13 | 157 | 9 | 156 | 1.53e-37 | 139 |
MS.gene08493.t1 | AT5G39610 | 54.545 | 132 | 54 | 5 | 7 | 137 | 17 | 143 | 1.54e-37 | 137 |
MS.gene08493.t1 | AT3G04070 | 43.103 | 174 | 80 | 5 | 1 | 158 | 1 | 171 | 1.81e-37 | 139 |
MS.gene08493.t1 | AT3G15500 | 46.386 | 166 | 67 | 7 | 10 | 162 | 14 | 170 | 1.85e-37 | 138 |
MS.gene08493.t1 | AT1G32510 | 44.444 | 171 | 79 | 5 | 8 | 163 | 4 | 173 | 2.34e-37 | 137 |
MS.gene08493.t1 | AT3G44290 | 45.000 | 160 | 75 | 6 | 1 | 159 | 11 | 158 | 3.28e-37 | 135 |
MS.gene08493.t1 | AT1G12260 | 45.342 | 161 | 76 | 7 | 3 | 157 | 2 | 156 | 4.31e-37 | 138 |
MS.gene08493.t1 | AT3G29035 | 54.264 | 129 | 53 | 5 | 10 | 137 | 24 | 147 | 7.05e-37 | 137 |
MS.gene08493.t1 | AT5G08790 | 45.912 | 159 | 69 | 6 | 10 | 157 | 7 | 159 | 7.19e-37 | 135 |
MS.gene08493.t1 | AT3G04070 | 48.936 | 141 | 65 | 4 | 1 | 137 | 1 | 138 | 7.51e-37 | 137 |
MS.gene08493.t1 | AT1G54330 | 49.007 | 151 | 71 | 4 | 10 | 157 | 6 | 153 | 7.80e-37 | 136 |
MS.gene08493.t1 | AT1G12260 | 45.342 | 161 | 76 | 7 | 3 | 157 | 2 | 156 | 1.01e-36 | 138 |
MS.gene08493.t1 | AT1G52890 | 43.182 | 176 | 81 | 6 | 10 | 175 | 14 | 180 | 1.31e-36 | 136 |
MS.gene08493.t1 | AT5G61430 | 54.264 | 129 | 53 | 5 | 10 | 137 | 16 | 139 | 1.35e-36 | 136 |
MS.gene08493.t1 | AT1G01720 | 44.937 | 158 | 71 | 5 | 10 | 157 | 7 | 158 | 1.47e-36 | 135 |
MS.gene08493.t1 | AT5G53950 | 54.615 | 130 | 55 | 3 | 9 | 137 | 16 | 142 | 1.71e-36 | 137 |
MS.gene08493.t1 | AT5G39820 | 34.978 | 223 | 115 | 4 | 13 | 208 | 23 | 242 | 2.08e-36 | 136 |
MS.gene08493.t1 | AT4G27410 | 45.570 | 158 | 67 | 6 | 10 | 157 | 14 | 162 | 2.32e-36 | 135 |
MS.gene08493.t1 | AT5G07680 | 54.264 | 129 | 53 | 5 | 10 | 137 | 17 | 140 | 2.91e-36 | 135 |
MS.gene08493.t1 | AT5G07680 | 54.264 | 129 | 53 | 5 | 10 | 137 | 3 | 126 | 3.01e-36 | 135 |
MS.gene08493.t1 | AT3G18400 | 41.500 | 200 | 104 | 8 | 10 | 201 | 5 | 199 | 6.07e-36 | 134 |
MS.gene08493.t1 | AT5G66300 | 46.104 | 154 | 74 | 5 | 10 | 157 | 12 | 162 | 6.11e-36 | 133 |
MS.gene08493.t1 | AT3G44290 | 45.000 | 160 | 75 | 6 | 1 | 159 | 11 | 158 | 6.12e-36 | 134 |
MS.gene08493.t1 | AT5G04410 | 48.684 | 152 | 69 | 4 | 13 | 158 | 12 | 160 | 9.93e-36 | 138 |
MS.gene08493.t1 | AT5G22290 | 46.000 | 150 | 71 | 6 | 13 | 159 | 24 | 166 | 1.00e-35 | 134 |
MS.gene08493.t1 | AT3G10500 | 50.000 | 152 | 67 | 5 | 13 | 158 | 12 | 160 | 1.08e-35 | 138 |
MS.gene08493.t1 | AT3G15510 | 42.135 | 178 | 81 | 5 | 14 | 172 | 21 | 195 | 1.12e-35 | 134 |
MS.gene08493.t1 | AT1G02250 | 45.455 | 154 | 79 | 4 | 11 | 161 | 4 | 155 | 1.45e-35 | 134 |
MS.gene08493.t1 | AT2G24430 | 46.452 | 155 | 75 | 4 | 10 | 159 | 16 | 167 | 1.51e-35 | 133 |
MS.gene08493.t1 | AT2G24430 | 46.452 | 155 | 75 | 4 | 10 | 159 | 16 | 167 | 1.51e-35 | 133 |
MS.gene08493.t1 | AT1G62700 | 41.398 | 186 | 96 | 7 | 3 | 183 | 2 | 179 | 1.51e-35 | 135 |
MS.gene08493.t1 | AT1G62700 | 41.398 | 186 | 96 | 7 | 3 | 183 | 2 | 179 | 1.51e-35 | 135 |
MS.gene08493.t1 | AT2G17040 | 39.524 | 210 | 102 | 7 | 13 | 214 | 9 | 201 | 1.94e-35 | 132 |
MS.gene08493.t1 | AT3G04060 | 52.713 | 129 | 56 | 4 | 10 | 137 | 20 | 144 | 2.92e-35 | 133 |
MS.gene08493.t1 | AT1G26870 | 50.000 | 126 | 59 | 3 | 13 | 137 | 19 | 141 | 4.28e-35 | 134 |
MS.gene08493.t1 | AT5G63790 | 41.361 | 191 | 88 | 7 | 10 | 182 | 50 | 234 | 4.51e-35 | 132 |
MS.gene08493.t1 | AT5G63790 | 41.361 | 191 | 88 | 7 | 10 | 182 | 60 | 244 | 4.56e-35 | 132 |
MS.gene08493.t1 | AT1G69490 | 44.937 | 158 | 72 | 7 | 10 | 157 | 9 | 161 | 1.19e-34 | 129 |
MS.gene08493.t1 | AT1G61110 | 43.976 | 166 | 86 | 5 | 7 | 171 | 13 | 172 | 1.46e-34 | 130 |
MS.gene08493.t1 | AT3G15170 | 51.938 | 129 | 58 | 3 | 10 | 137 | 20 | 145 | 1.53e-34 | 130 |
MS.gene08493.t1 | AT1G71930 | 44.444 | 153 | 77 | 5 | 10 | 157 | 9 | 158 | 3.78e-34 | 129 |
MS.gene08493.t1 | AT1G71930 | 44.444 | 153 | 77 | 5 | 10 | 157 | 9 | 158 | 3.78e-34 | 129 |
MS.gene08493.t1 | AT1G34190 | 47.742 | 155 | 66 | 5 | 13 | 158 | 19 | 167 | 4.88e-34 | 133 |
MS.gene08493.t1 | AT5G62380 | 44.516 | 155 | 76 | 6 | 9 | 157 | 6 | 156 | 4.94e-34 | 130 |
MS.gene08493.t1 | AT5G62380 | 44.516 | 155 | 76 | 6 | 9 | 157 | 6 | 156 | 4.94e-34 | 130 |
MS.gene08493.t1 | AT5G18270 | 51.938 | 129 | 57 | 4 | 10 | 137 | 21 | 145 | 5.64e-34 | 129 |
MS.gene08493.t1 | AT3G12910 | 48.148 | 135 | 64 | 4 | 13 | 144 | 24 | 155 | 8.63e-34 | 128 |
MS.gene08493.t1 | AT5G04395 | 41.772 | 158 | 78 | 4 | 1 | 145 | 19 | 175 | 9.86e-34 | 124 |
MS.gene08493.t1 | AT5G18270 | 51.163 | 129 | 58 | 4 | 10 | 137 | 21 | 145 | 1.39e-33 | 128 |
MS.gene08493.t1 | AT3G10480 | 34.363 | 259 | 112 | 8 | 13 | 229 | 30 | 272 | 1.42e-33 | 131 |
MS.gene08493.t1 | AT4G10350 | 45.806 | 155 | 74 | 5 | 10 | 157 | 9 | 160 | 1.69e-33 | 128 |
MS.gene08493.t1 | AT4G27410 | 42.197 | 173 | 68 | 7 | 10 | 157 | 14 | 179 | 1.70e-33 | 127 |
MS.gene08493.t1 | AT1G33280 | 46.053 | 152 | 75 | 5 | 10 | 157 | 8 | 156 | 1.83e-33 | 127 |
MS.gene08493.t1 | AT1G34180 | 52.381 | 126 | 56 | 3 | 13 | 137 | 19 | 141 | 2.10e-33 | 130 |
MS.gene08493.t1 | AT1G76420 | 43.506 | 154 | 77 | 5 | 10 | 157 | 22 | 171 | 2.38e-33 | 127 |
MS.gene08493.t1 | AT1G34180 | 52.381 | 126 | 56 | 3 | 13 | 137 | 19 | 141 | 4.92e-33 | 130 |
MS.gene08493.t1 | AT2G18060 | 44.156 | 154 | 76 | 6 | 10 | 157 | 9 | 158 | 6.37e-33 | 127 |
MS.gene08493.t1 | AT2G18060 | 44.156 | 154 | 76 | 6 | 10 | 157 | 9 | 158 | 6.37e-33 | 127 |
MS.gene08493.t1 | AT2G02450 | 44.295 | 149 | 75 | 5 | 13 | 157 | 54 | 198 | 7.00e-33 | 127 |
MS.gene08493.t1 | AT2G02450 | 44.295 | 149 | 75 | 5 | 13 | 157 | 54 | 198 | 9.96e-33 | 127 |
MS.gene08493.t1 | AT2G33480 | 46.753 | 154 | 66 | 6 | 10 | 157 | 15 | 158 | 1.07e-32 | 124 |
MS.gene08493.t1 | AT2G33480 | 45.455 | 154 | 70 | 5 | 10 | 157 | 15 | 160 | 1.32e-32 | 124 |
MS.gene08493.t1 | AT4G36160 | 43.506 | 154 | 77 | 6 | 10 | 157 | 14 | 163 | 2.29e-32 | 126 |
MS.gene08493.t1 | AT4G36160 | 43.506 | 154 | 77 | 6 | 10 | 157 | 10 | 159 | 2.46e-32 | 125 |
MS.gene08493.t1 | AT4G36160 | 43.506 | 154 | 77 | 6 | 10 | 157 | 10 | 159 | 2.46e-32 | 125 |
MS.gene08493.t1 | AT1G77450 | 42.949 | 156 | 74 | 5 | 11 | 157 | 11 | 160 | 3.02e-32 | 122 |
MS.gene08493.t1 | AT2G43000 | 36.923 | 195 | 104 | 7 | 13 | 193 | 21 | 210 | 6.01e-32 | 122 |
MS.gene08493.t1 | AT5G13180 | 41.176 | 153 | 79 | 4 | 10 | 157 | 14 | 160 | 6.19e-32 | 122 |
MS.gene08493.t1 | AT1G56010 | 41.401 | 157 | 79 | 4 | 10 | 157 | 19 | 171 | 8.93e-32 | 123 |
MS.gene08493.t1 | AT1G01010 | 43.590 | 156 | 78 | 4 | 12 | 159 | 5 | 158 | 9.20e-31 | 122 |
MS.gene08493.t1 | AT1G79580 | 43.871 | 155 | 75 | 6 | 10 | 157 | 17 | 166 | 1.95e-30 | 120 |
MS.gene08493.t1 | AT1G79580 | 43.871 | 155 | 75 | 6 | 10 | 157 | 17 | 166 | 1.95e-30 | 120 |
MS.gene08493.t1 | AT1G79580 | 43.871 | 155 | 75 | 6 | 10 | 157 | 17 | 166 | 1.95e-30 | 120 |
MS.gene08493.t1 | AT1G79580 | 43.871 | 155 | 75 | 6 | 10 | 157 | 17 | 166 | 1.95e-30 | 120 |
MS.gene08493.t1 | AT1G79580 | 43.871 | 155 | 75 | 6 | 10 | 157 | 17 | 166 | 1.95e-30 | 120 |
MS.gene08493.t1 | AT2G46770 | 41.916 | 167 | 85 | 7 | 10 | 171 | 16 | 175 | 2.12e-30 | 120 |
MS.gene08493.t1 | AT1G34180 | 47.826 | 138 | 56 | 4 | 13 | 137 | 19 | 153 | 3.89e-30 | 121 |
MS.gene08493.t1 | AT1G34180 | 47.826 | 138 | 56 | 4 | 13 | 137 | 19 | 153 | 8.35e-30 | 121 |
MS.gene08493.t1 | AT3G04420 | 37.500 | 192 | 110 | 6 | 11 | 194 | 4 | 193 | 9.54e-30 | 117 |
MS.gene08493.t1 | AT3G61910 | 34.071 | 226 | 118 | 9 | 10 | 214 | 11 | 226 | 2.05e-29 | 117 |
MS.gene08493.t1 | AT3G04420 | 37.500 | 192 | 110 | 6 | 11 | 194 | 4 | 193 | 2.05e-29 | 117 |
MS.gene08493.t1 | AT5G22380 | 41.026 | 156 | 80 | 5 | 10 | 154 | 5 | 159 | 3.99e-29 | 114 |
MS.gene08493.t1 | AT1G52880 | 44.643 | 168 | 68 | 6 | 14 | 162 | 21 | 182 | 6.49e-29 | 115 |
MS.gene08493.t1 | AT3G12977 | 37.433 | 187 | 91 | 7 | 10 | 182 | 18 | 192 | 8.15e-29 | 114 |
MS.gene08493.t1 | AT1G32770 | 41.667 | 168 | 72 | 8 | 10 | 157 | 16 | 177 | 1.56e-28 | 115 |
MS.gene08493.t1 | AT4G28530 | 38.554 | 166 | 83 | 4 | 10 | 158 | 10 | 173 | 3.09e-28 | 114 |
MS.gene08493.t1 | AT1G02220 | 41.781 | 146 | 80 | 3 | 11 | 155 | 4 | 145 | 1.11e-27 | 113 |
MS.gene08493.t1 | AT3G44350 | 39.490 | 157 | 83 | 5 | 12 | 158 | 7 | 161 | 4.35e-26 | 105 |
MS.gene08493.t1 | AT3G44350 | 43.609 | 133 | 69 | 4 | 12 | 140 | 7 | 137 | 4.99e-26 | 103 |
MS.gene08493.t1 | AT1G32870 | 44.805 | 154 | 72 | 6 | 13 | 158 | 13 | 161 | 1.69e-25 | 108 |
MS.gene08493.t1 | AT1G32870 | 44.805 | 154 | 72 | 6 | 13 | 158 | 13 | 161 | 1.98e-25 | 108 |
MS.gene08493.t1 | AT1G32870 | 44.805 | 154 | 72 | 6 | 13 | 158 | 49 | 197 | 2.27e-25 | 108 |
MS.gene08493.t1 | AT5G61430 | 54.430 | 79 | 33 | 3 | 61 | 138 | 1 | 77 | 8.17e-20 | 89.0 |
MS.gene08493.t1 | AT3G04430 | 40.441 | 136 | 65 | 5 | 16 | 139 | 6 | 137 | 8.92e-20 | 87.0 |
MS.gene08493.t1 | AT4G28530 | 42.202 | 109 | 46 | 2 | 10 | 103 | 10 | 116 | 3.18e-18 | 85.1 |
MS.gene08493.t1 | AT5G64530 | 36.154 | 130 | 65 | 5 | 10 | 137 | 3 | 116 | 5.85e-18 | 80.9 |
MS.gene08493.t1 | AT3G12977 | 37.903 | 124 | 64 | 4 | 68 | 182 | 20 | 139 | 7.91e-18 | 82.4 |
MS.gene08493.t1 | AT4G10350 | 41.905 | 105 | 53 | 3 | 59 | 157 | 11 | 113 | 1.46e-17 | 82.8 |
MS.gene08493.t1 | AT5G64530 | 36.154 | 130 | 65 | 5 | 10 | 137 | 3 | 116 | 1.82e-17 | 80.5 |
MS.gene08493.t1 | AT1G56010 | 41.414 | 99 | 47 | 3 | 68 | 157 | 8 | 104 | 7.93e-17 | 80.1 |
MS.gene08493.t1 | AT2G33480 | 42.857 | 98 | 48 | 3 | 66 | 157 | 8 | 103 | 3.78e-16 | 77.4 |
MS.gene08493.t1 | AT3G56530 | 35.333 | 150 | 87 | 7 | 11 | 154 | 53 | 198 | 4.29e-14 | 73.2 |
MS.gene08493.t1 | AT5G14490 | 29.444 | 180 | 103 | 6 | 6 | 167 | 54 | 227 | 1.26e-12 | 68.9 |
MS.gene08493.t1 | AT5G14490 | 29.444 | 180 | 103 | 6 | 6 | 167 | 51 | 224 | 1.30e-12 | 68.9 |
MS.gene08493.t1 | AT5G14490 | 29.444 | 180 | 103 | 6 | 6 | 167 | 51 | 224 | 1.83e-12 | 67.8 |
MS.gene08493.t1 | AT5G14490 | 29.444 | 180 | 103 | 6 | 6 | 167 | 54 | 227 | 1.89e-12 | 68.6 |
MS.gene08493.t1 | AT2G43000 | 33.083 | 133 | 73 | 5 | 75 | 193 | 2 | 132 | 4.38e-12 | 65.1 |
Find 69 sgRNAs with CRISPR-Local
Find 107 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATCATTTCGAGATGATTTC+GGG | 0.227385 | 8.2:-72111136 | MS.gene08493:CDS |
ACAAATACGCAAATAGTAAA+AGG | 0.269504 | 8.2:-72112224 | MS.gene08493:CDS |
GCATCATTTCGAGATGATTT+CGG | 0.275502 | 8.2:-72111137 | MS.gene08493:CDS |
TGGTCTTGACCGTAAGATTA+AGG | 0.284539 | 8.2:-72112163 | MS.gene08493:CDS |
GAATATGGAACCAATGTTTC+AGG | 0.286511 | 8.2:-72111673 | MS.gene08493:CDS |
AGAGGTACTGACAATGTTAT+TGG | 0.291344 | 8.2:-72112138 | MS.gene08493:CDS |
TTTACAGTGTGGCAATGTTC+TGG | 0.292487 | 8.2:-72111207 | MS.gene08493:intron |
TTCCTCTTCAGCTTTCTTCT+CGG | 0.325142 | 8.2:+72111894 | None:intergenic |
TACCACCTTTGATGATAATC+AGG | 0.334501 | 8.2:-72112037 | MS.gene08493:intron |
CTCCTGGTGTTAAAAGCAAC+TGG | 0.345111 | 8.2:-72112080 | MS.gene08493:CDS |
TACTATAATGGTTGTGCTCC+TGG | 0.345726 | 8.2:-72112096 | MS.gene08493:CDS |
AAAACACTTGTGTACTATAA+TGG | 0.357000 | 8.2:-72112108 | MS.gene08493:CDS |
GACATGGTGGTGGTTGGTCT+TGG | 0.361614 | 8.2:+72110999 | None:intergenic |
TCGTTGAGAATGATTTACTA+TGG | 0.400930 | 8.2:-72111387 | MS.gene08493:CDS |
GAGGTACTGACAATGTTATT+GGG | 0.406699 | 8.2:-72112137 | MS.gene08493:CDS |
TGATGAGGTTCCTGAAACAT+TGG | 0.411707 | 8.2:+72111663 | None:intergenic |
CATATCGATGTATCCACTTT+CGG | 0.415095 | 8.2:+72111548 | None:intergenic |
CTTCTTGAACATCCTAGTTC+AGG | 0.422072 | 8.2:-72111170 | MS.gene08493:CDS |
GAAGGACACAGTGTGGATAC+TGG | 0.428296 | 8.2:-72112194 | MS.gene08493:CDS |
GACCGTAAGATTAAGGTTAG+AGG | 0.442904 | 8.2:-72112156 | MS.gene08493:CDS |
TGGTTGGTCTTGGATGATAC+TGG | 0.447272 | 8.2:+72111009 | None:intergenic |
TGTTTGCAAGTTCGAACCTT+GGG | 0.454947 | 8.2:-72112390 | MS.gene08493:CDS |
TACCTCGCCAGAAAAGAATA+TGG | 0.459100 | 8.2:-72111688 | MS.gene08493:CDS |
CTCGGACTGGACAGGAAAGC+TGG | 0.467178 | 8.2:+72111410 | None:intergenic |
TCATTCTCAACGACTCGGAC+TGG | 0.469733 | 8.2:+72111397 | None:intergenic |
CCTCATAACTATGTTCCTGT+TGG | 0.475870 | 8.2:-72112515 | MS.gene08493:CDS |
GCATAGTATTCGCCTGAACT+AGG | 0.492328 | 8.2:+72111158 | None:intergenic |
TTTACAAGCTCTTCATCTGT+TGG | 0.494683 | 8.2:+72112479 | None:intergenic |
GATAGAATGGTATGTGATGA+AGG | 0.494733 | 8.2:-72111868 | MS.gene08493:CDS |
GGACGGAATCTGAATCCAAC+AGG | 0.495067 | 8.2:+72112500 | None:intergenic |
TACCTCTAACCTTAATCTTA+CGG | 0.495515 | 8.2:+72112154 | None:intergenic |
CAATTGTTTCAGGTAATAAG+TGG | 0.498045 | 8.2:-72111711 | MS.gene08493:intron |
TCGGAACTCATGTGTCTACT+TGG | 0.499283 | 8.2:+72111841 | None:intergenic |
TTCAATCTCTGAAAATGAGA+TGG | 0.499943 | 8.2:-72111604 | MS.gene08493:CDS |
TGAAGAGGAAACTGATAGAA+TGG | 0.513653 | 8.2:-72111881 | MS.gene08493:CDS |
GAAAATCAAGAAACAGTTGA+AGG | 0.516420 | 8.2:-72111814 | MS.gene08493:CDS |
CCAACAGGAACATAGTTATG+AGG | 0.518146 | 8.2:+72112515 | None:intergenic |
AGCCGAGAAGAAAGCTGAAG+AGG | 0.521986 | 8.2:-72111896 | MS.gene08493:CDS |
TTCGAACCTTGGGACTTACC+AGG | 0.522061 | 8.2:-72112380 | MS.gene08493:intron |
TTGTTTCTTCGTAGAGTGGA+AGG | 0.522631 | 8.2:+72111035 | None:intergenic |
GAAGCATCTTTATCGAACTC+AGG | 0.527450 | 8.2:-72111582 | MS.gene08493:CDS |
GTTATTGTTTCTTCGTAGAG+TGG | 0.529521 | 8.2:+72111031 | None:intergenic |
ATCAATTCAATGTTAAATGA+CGG | 0.532646 | 8.2:-72111486 | MS.gene08493:CDS |
TGCTGAATTAGTCTCTATGC+CGG | 0.535468 | 8.2:-72111349 | MS.gene08493:intron |
TCCTCATCAATAGTTTCGAA+CGG | 0.541580 | 8.2:+72111519 | None:intergenic |
CTCAACGACTCGGACTGGAC+AGG | 0.555897 | 8.2:+72111402 | None:intergenic |
AAGCATCTTTATCGAACTCA+GGG | 0.557608 | 8.2:-72111581 | MS.gene08493:CDS |
CAAGCTCTTCATCTGTTGGA+CGG | 0.560584 | 8.2:+72112483 | None:intergenic |
ATGTTTGCAAGTTCGAACCT+TGG | 0.568862 | 8.2:-72112391 | MS.gene08493:CDS |
ATAGTAAAAGGTTTAACAGA+AGG | 0.579914 | 8.2:-72112212 | MS.gene08493:CDS |
ATAGAATGGTATGTGATGAA+GGG | 0.580154 | 8.2:-72111867 | MS.gene08493:CDS |
CAATGTTCTGGATACTTCAA+CGG | 0.580206 | 8.2:-72111195 | MS.gene08493:CDS |
ACAAACCTGATTATCATCAA+AGG | 0.588827 | 8.2:+72112032 | None:intergenic |
TGTGGATACTGGAAAGCCAC+TGG | 0.602459 | 8.2:-72112183 | MS.gene08493:CDS |
TCCTGGTGTTAAAAGCAACT+GGG | 0.605841 | 8.2:-72112079 | MS.gene08493:CDS |
AGCTATAACATTGTTGACAG+TGG | 0.605859 | 8.2:+72112421 | None:intergenic |
TTGCAATTGATCATCTCTAG+AGG | 0.607895 | 8.2:+72111074 | None:intergenic |
TCCGTTCGAAACTATTGATG+AGG | 0.608684 | 8.2:-72111520 | MS.gene08493:CDS |
ATGATTTACTATGGAAGCAG+TGG | 0.614801 | 8.2:-72111378 | MS.gene08493:CDS |
GAAGACTGGTATGTTAACAA+AGG | 0.622665 | 8.2:+72111624 | None:intergenic |
AATCTTACGGTCAAGACCAG+TGG | 0.626820 | 8.2:+72112167 | None:intergenic |
TAGAATGGTATGTGATGAAG+GGG | 0.641183 | 8.2:-72111866 | MS.gene08493:CDS |
TAAAATCCGATGATCCCGAA+TGG | 0.649145 | 8.2:-72112269 | MS.gene08493:CDS |
ATCATTTCGAGATGATTTCG+GGG | 0.650121 | 8.2:-72111135 | MS.gene08493:CDS |
AACCTGATTATCATCAAAGG+TGG | 0.653329 | 8.2:+72112035 | None:intergenic |
TTTGCGTATTTGTAATCGCG+AGG | 0.654879 | 8.2:+72112234 | None:intergenic |
GTAAATCATTCTCAACGACT+CGG | 0.660341 | 8.2:+72111392 | None:intergenic |
TCATTTCGAGATGATTTCGG+GGG | 0.671935 | 8.2:-72111134 | MS.gene08493:CDS |
TTTAACAGAAGGACACAGTG+TGG | 0.694289 | 8.2:-72112201 | MS.gene08493:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTATGAGAAAATAATGAT+GGG | + | chr8.2:72111158-72111177 | None:intergenic | 15.0% |
!!! | TTTTTATGAGAAAATAATGA+TGG | + | chr8.2:72111159-72111178 | None:intergenic | 15.0% |
!! | ATACACACTTTAATATCATT+TGG | + | chr8.2:72112193-72112212 | None:intergenic | 20.0% |
!! | ATCAATTCAATGTTAAATGA+CGG | - | chr8.2:72112009-72112028 | MS.gene08493:intron | 20.0% |
!! | TTTATGAGAAAATAATGATG+GGG | + | chr8.2:72111157-72111176 | None:intergenic | 20.0% |
! | AAAACACTTGTGTACTATAA+TGG | - | chr8.2:72111387-72111406 | MS.gene08493:CDS | 25.0% |
! | ACAAATACGCAAATAGTAAA+AGG | - | chr8.2:72111271-72111290 | MS.gene08493:intron | 25.0% |
! | ATAGTAAAAGGTTTAACAGA+AGG | - | chr8.2:72111283-72111302 | MS.gene08493:intron | 25.0% |
! | TATCTCAAAAACAAGTTACT+TGG | - | chr8.2:72111043-72111062 | MS.gene08493:CDS | 25.0% |
!! | TTCTTCTAAATTTTACAGTG+TGG | - | chr8.2:72112277-72112296 | MS.gene08493:CDS | 25.0% |
!! | TTTTGAGCAGAAATATTTAC+CGG | + | chr8.2:72112168-72112187 | None:intergenic | 25.0% |
!!! | AAATGACGGATATTTTGTTA+AGG | - | chr8.2:72112023-72112042 | MS.gene08493:intron | 25.0% |
!!! | CTTATTTTTGAACAAGTACT+TGG | - | chr8.2:72112215-72112234 | MS.gene08493:CDS | 25.0% |
!!! | TAACAAAGGAAAGTACTTTT+CGG | + | chr8.2:72111860-72111879 | None:intergenic | 25.0% |
AAGAATGAAATCCTTACATC+AGG | + | chr8.2:72111711-72111730 | None:intergenic | 30.0% | |
ACAAACCTGATTATCATCAA+AGG | + | chr8.2:72111466-72111485 | None:intergenic | 30.0% | |
ACTTGTTTGTCAATTGTTTC+AGG | - | chr8.2:72111774-72111793 | MS.gene08493:intron | 30.0% | |
AGGACAAAAGAAAAACCATT+CGG | + | chr8.2:72111244-72111263 | None:intergenic | 30.0% | |
ATAGAATGGTATGTGATGAA+GGG | - | chr8.2:72111628-72111647 | MS.gene08493:CDS | 30.0% | |
ATGTTTCAACTTCATGAGTA+CGG | - | chr8.2:72111498-72111517 | MS.gene08493:CDS | 30.0% | |
GAAAATCAAGAAACAGTTGA+AGG | - | chr8.2:72111681-72111700 | MS.gene08493:CDS | 30.0% | |
GTTGATTATCCTCCAAAATT+TGG | - | chr8.2:72111541-72111560 | MS.gene08493:CDS | 30.0% | |
TACCTCTAACCTTAATCTTA+CGG | + | chr8.2:72111344-72111363 | None:intergenic | 30.0% | |
TCGTTGAGAATGATTTACTA+TGG | - | chr8.2:72112108-72112127 | MS.gene08493:CDS | 30.0% | |
! | AAAAGTCCTCTACCAAATTT+TGG | + | chr8.2:72111556-72111575 | None:intergenic | 30.0% |
! | ATGAAATCTCTAAGTTGAGT+TGG | - | chr8.2:72112243-72112262 | MS.gene08493:CDS | 30.0% |
! | CAATTGTTTCAGGTAATAAG+TGG | - | chr8.2:72111784-72111803 | MS.gene08493:intron | 30.0% |
! | TGTTTCTTGATTTTCGTGAT+CGG | + | chr8.2:72111676-72111695 | None:intergenic | 30.0% |
! | TTCAATCTCTGAAAATGAGA+TGG | - | chr8.2:72111891-72111910 | MS.gene08493:CDS | 30.0% |
!! | ATTGGTTCCATATTCTTTTC+TGG | + | chr8.2:72111817-72111836 | None:intergenic | 30.0% |
!!! | GTAACTTGTTTTTGAGATAG+TGG | + | chr8.2:72111042-72111061 | None:intergenic | 30.0% |
AACCTGATTATCATCAAAGG+TGG | + | chr8.2:72111463-72111482 | None:intergenic | 35.0% | |
AAGCATCTTTATCGAACTCA+GGG | - | chr8.2:72111914-72111933 | MS.gene08493:CDS | 35.0% | |
AGCTATAACATTGTTGACAG+TGG | + | chr8.2:72111077-72111096 | None:intergenic | 35.0% | |
ATCATTTCGAGATGATTTCG+GGG | - | chr8.2:72112360-72112379 | MS.gene08493:intron | 35.0% | |
ATGATTTACTATGGAAGCAG+TGG | - | chr8.2:72112117-72112136 | MS.gene08493:CDS | 35.0% | |
CATATCGATGTATCCACTTT+CGG | + | chr8.2:72111950-72111969 | None:intergenic | 35.0% | |
CATCATTTCGAGATGATTTC+GGG | - | chr8.2:72112359-72112378 | MS.gene08493:intron | 35.0% | |
GAAGACTGGTATGTTAACAA+AGG | + | chr8.2:72111874-72111893 | None:intergenic | 35.0% | |
GAATATGGAACCAATGTTTC+AGG | - | chr8.2:72111822-72111841 | MS.gene08493:CDS | 35.0% | |
GATAGAATGGTATGTGATGA+AGG | - | chr8.2:72111627-72111646 | MS.gene08493:CDS | 35.0% | |
GCATCATTTCGAGATGATTT+CGG | - | chr8.2:72112358-72112377 | MS.gene08493:intron | 35.0% | |
GGACAAAAGAAAAACCATTC+GGG | + | chr8.2:72111243-72111262 | None:intergenic | 35.0% | |
GTAAATCATTCTCAACGACT+CGG | + | chr8.2:72112106-72112125 | None:intergenic | 35.0% | |
TAGAATGGTATGTGATGAAG+GGG | - | chr8.2:72111629-72111648 | MS.gene08493:CDS | 35.0% | |
TATCCTCCAAAATTTGGTAG+AGG | - | chr8.2:72111547-72111566 | MS.gene08493:CDS | 35.0% | |
TCCTCATCAATAGTTTCGAA+CGG | + | chr8.2:72111979-72111998 | None:intergenic | 35.0% | |
TGAAGAGGAAACTGATAGAA+TGG | - | chr8.2:72111614-72111633 | MS.gene08493:CDS | 35.0% | |
TTGAAGGAATTCCTGATGTA+AGG | - | chr8.2:72111697-72111716 | MS.gene08493:CDS | 35.0% | |
TTGCAATTGATCATCTCTAG+AGG | + | chr8.2:72112424-72112443 | None:intergenic | 35.0% | |
TTTACAAGCTCTTCATCTGT+TGG | + | chr8.2:72111019-72111038 | None:intergenic | 35.0% | |
! | CAATGTTCTGGATACTTCAA+CGG | - | chr8.2:72112300-72112319 | MS.gene08493:intron | 35.0% |
! | CATTTTCAGAGATTGAAGAC+TGG | + | chr8.2:72111888-72111907 | None:intergenic | 35.0% |
! | GTTATTGTTTCTTCGTAGAG+TGG | + | chr8.2:72112467-72112486 | None:intergenic | 35.0% |
! | TACCACCTTTGATGATAATC+AGG | - | chr8.2:72111458-72111477 | MS.gene08493:CDS | 35.0% |
! | TGAAGCAGATCTTTTTGACA+TGG | + | chr8.2:72112515-72112534 | None:intergenic | 35.0% |
!! | AGAGGTACTGACAATGTTAT+TGG | - | chr8.2:72111357-72111376 | MS.gene08493:CDS | 35.0% |
!! | GAGGTACTGACAATGTTATT+GGG | - | chr8.2:72111358-72111377 | MS.gene08493:CDS | 35.0% |
!! | GGTTTGTTTGTGTTTTTACC+TGG | + | chr8.2:72111136-72111155 | None:intergenic | 35.0% |
!!! | TCTCTAAGTTGAGTTGGTTT+TGG | - | chr8.2:72112249-72112268 | MS.gene08493:CDS | 35.0% |
ATGTTTGCAAGTTCGAACCT+TGG | - | chr8.2:72111104-72111123 | MS.gene08493:CDS | 40.0% | |
CCAACAGGAACATAGTTATG+AGG | + | chr8.2:72110983-72111002 | None:intergenic | 40.0% | |
CCTCATAACTATGTTCCTGT+TGG | - | chr8.2:72110980-72110999 | MS.gene08493:CDS | 40.0% | |
CTTCTTGAACATCCTAGTTC+AGG | - | chr8.2:72112325-72112344 | MS.gene08493:intron | 40.0% | |
GAAAAACCATTCGGGATCAT+CGG | + | chr8.2:72111235-72111254 | None:intergenic | 40.0% | |
GACCGTAAGATTAAGGTTAG+AGG | - | chr8.2:72111339-72111358 | MS.gene08493:intron | 40.0% | |
TAAAATCCGATGATCCCGAA+TGG | - | chr8.2:72111226-72111245 | MS.gene08493:intron | 40.0% | |
TACCTCGCCAGAAAAGAATA+TGG | - | chr8.2:72111807-72111826 | MS.gene08493:CDS | 40.0% | |
TACTATAATGGTTGTGCTCC+TGG | - | chr8.2:72111399-72111418 | MS.gene08493:CDS | 40.0% | |
TCATTTCGAGATGATTTCGG+GGG | - | chr8.2:72112361-72112380 | MS.gene08493:intron | 40.0% | |
TCCGTTCGAAACTATTGATG+AGG | - | chr8.2:72111975-72111994 | MS.gene08493:intron | 40.0% | |
TGATGAGGTTCCTGAAACAT+TGG | + | chr8.2:72111835-72111854 | None:intergenic | 40.0% | |
TGTTTGCAAGTTCGAACCTT+GGG | - | chr8.2:72111105-72111124 | MS.gene08493:CDS | 40.0% | |
TTCCTCTTCAGCTTTCTTCT+CGG | + | chr8.2:72111604-72111623 | None:intergenic | 40.0% | |
TTTAACAGAAGGACACAGTG+TGG | - | chr8.2:72111294-72111313 | MS.gene08493:intron | 40.0% | |
TTTACAGTGTGGCAATGTTC+TGG | - | chr8.2:72112288-72112307 | MS.gene08493:intron | 40.0% | |
TTTGCGTATTTGTAATCGCG+AGG | + | chr8.2:72111264-72111283 | None:intergenic | 40.0% | |
! | AGATCTTTTTGACATGGTGG+TGG | + | chr8.2:72112509-72112528 | None:intergenic | 40.0% |
! | AGCAGATCTTTTTGACATGG+TGG | + | chr8.2:72112512-72112531 | None:intergenic | 40.0% |
! | AGTCCTCTACCAAATTTTGG+AGG | + | chr8.2:72111553-72111572 | None:intergenic | 40.0% |
! | GAAGCATCTTTATCGAACTC+AGG | - | chr8.2:72111913-72111932 | MS.gene08493:CDS | 40.0% |
! | TCCTGGTGTTAAAAGCAACT+GGG | - | chr8.2:72111416-72111435 | MS.gene08493:CDS | 40.0% |
! | TGCTGAATTAGTCTCTATGC+CGG | - | chr8.2:72112146-72112165 | MS.gene08493:CDS | 40.0% |
! | TGGTCTTGACCGTAAGATTA+AGG | - | chr8.2:72111332-72111351 | MS.gene08493:intron | 40.0% |
! | TTGTTTCTTCGTAGAGTGGA+AGG | + | chr8.2:72112463-72112482 | None:intergenic | 40.0% |
! | TTTTTACCTGGTAAGTCCCA+AGG | + | chr8.2:72111124-72111143 | None:intergenic | 40.0% |
!! | AAGTACTTTTCGGCTTGATG+AGG | + | chr8.2:72111850-72111869 | None:intergenic | 40.0% |
!! | GGGTTTTATGATTCCGAAAG+TGG | - | chr8.2:72111934-72111953 | MS.gene08493:intron | 40.0% |
!! | TTCCATATTCTTTTCTGGCG+AGG | + | chr8.2:72111812-72111831 | None:intergenic | 40.0% |
AATCTTACGGTCAAGACCAG+TGG | + | chr8.2:72111331-72111350 | None:intergenic | 45.0% | |
AGATGATTTCGGGGGATTTG+AGG | - | chr8.2:72112369-72112388 | MS.gene08493:intron | 45.0% | |
CAAGCTCTTCATCTGTTGGA+CGG | + | chr8.2:72111015-72111034 | None:intergenic | 45.0% | |
GCATAGTATTCGCCTGAACT+AGG | + | chr8.2:72112340-72112359 | None:intergenic | 45.0% | |
TCGGAACTCATGTGTCTACT+TGG | + | chr8.2:72111657-72111676 | None:intergenic | 45.0% | |
! | CTCCTGGTGTTAAAAGCAAC+TGG | - | chr8.2:72111415-72111434 | MS.gene08493:CDS | 45.0% |
!! | TGGTTGGTCTTGGATGATAC+TGG | + | chr8.2:72112489-72112508 | None:intergenic | 45.0% |
!!! | ACCCAGTTGCTTTTAACACC+AGG | + | chr8.2:72111420-72111439 | None:intergenic | 45.0% |
!!! | CTTTTTGACATGGTGGTGGT+TGG | + | chr8.2:72112505-72112524 | None:intergenic | 45.0% |
AGCCGAGAAGAAAGCTGAAG+AGG | - | chr8.2:72111599-72111618 | MS.gene08493:CDS | 50.0% | |
GAAGGACACAGTGTGGATAC+TGG | - | chr8.2:72111301-72111320 | MS.gene08493:intron | 50.0% | |
GGACGGAATCTGAATCCAAC+AGG | + | chr8.2:72110998-72111017 | None:intergenic | 50.0% | |
TGTGGATACTGGAAAGCCAC+TGG | - | chr8.2:72111312-72111331 | MS.gene08493:intron | 50.0% | |
TTCGAACCTTGGGACTTACC+AGG | - | chr8.2:72111115-72111134 | MS.gene08493:CDS | 50.0% | |
! | TCATTCTCAACGACTCGGAC+TGG | + | chr8.2:72112101-72112120 | None:intergenic | 50.0% |
!! | GACATGGTGGTGGTTGGTCT+TGG | + | chr8.2:72112499-72112518 | None:intergenic | 55.0% |
! | CTCAACGACTCGGACTGGAC+AGG | + | chr8.2:72112096-72112115 | None:intergenic | 60.0% |
! | CTCGGACTGGACAGGAAAGC+TGG | + | chr8.2:72112088-72112107 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 72110965 | 72112552 | 72110965 | ID=MS.gene08493 |
chr8.2 | mRNA | 72110965 | 72112552 | 72110965 | ID=MS.gene08493.t1;Parent=MS.gene08493 |
chr8.2 | exon | 72112381 | 72112552 | 72112381 | ID=MS.gene08493.t1.exon1;Parent=MS.gene08493.t1 |
chr8.2 | CDS | 72112381 | 72112552 | 72112381 | ID=cds.MS.gene08493.t1;Parent=MS.gene08493.t1 |
chr8.2 | exon | 72112038 | 72112303 | 72112038 | ID=MS.gene08493.t1.exon2;Parent=MS.gene08493.t1 |
chr8.2 | CDS | 72112038 | 72112303 | 72112038 | ID=cds.MS.gene08493.t1;Parent=MS.gene08493.t1 |
chr8.2 | exon | 72111804 | 72111950 | 72111804 | ID=MS.gene08493.t1.exon3;Parent=MS.gene08493.t1 |
chr8.2 | CDS | 72111804 | 72111950 | 72111804 | ID=cds.MS.gene08493.t1;Parent=MS.gene08493.t1 |
chr8.2 | exon | 72111350 | 72111721 | 72111350 | ID=MS.gene08493.t1.exon4;Parent=MS.gene08493.t1 |
chr8.2 | CDS | 72111350 | 72111721 | 72111350 | ID=cds.MS.gene08493.t1;Parent=MS.gene08493.t1 |
chr8.2 | exon | 72110965 | 72111222 | 72110965 | ID=MS.gene08493.t1.exon5;Parent=MS.gene08493.t1 |
chr8.2 | CDS | 72110965 | 72111222 | 72110965 | ID=cds.MS.gene08493.t1;Parent=MS.gene08493.t1 |
Gene Sequence |
Protein sequence |