AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene08494

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08494.t1 MTR_8g023860 88.065 310 31 1 1 304 1 310 0.0 540
MS.gene08494.t1 MTR_8g023860 85.135 222 27 1 300 515 198 419 3.37e-126 375
MS.gene08494.t1 MTR_8g023840 67.183 323 84 6 1 304 1 320 1.26e-137 403
MS.gene08494.t1 MTR_8g023840 52.564 234 60 5 300 515 198 398 1.23e-61 207
MS.gene08494.t1 MTR_8g023930 68.284 268 77 2 10 269 22 289 2.40e-130 387
MS.gene08494.t1 MTR_8g023930 51.250 80 31 2 300 371 210 289 5.05e-16 80.9
MS.gene08494.t1 MTR_8g023900 64.360 289 92 4 1 280 184 470 1.45e-127 380
MS.gene08494.t1 MTR_8g023900 64.324 185 64 2 1 183 1 185 8.93e-79 254
MS.gene08494.t1 MTR_8g023900 38.462 143 71 5 248 382 337 470 5.13e-18 87.0
MS.gene08494.t1 MTR_8g023880 48.598 214 85 6 12 211 7 209 1.76e-54 184
MS.gene08494.t1 MTR_5g069030 44.206 233 102 8 8 229 21 236 4.58e-52 187
MS.gene08494.t1 MTR_3g093040 51.136 176 73 5 8 177 104 272 5.88e-52 179
MS.gene08494.t1 MTR_3g093050 53.659 164 67 4 8 165 18 178 8.18e-51 183
MS.gene08494.t1 MTR_3g093050 53.659 164 67 4 8 165 18 178 1.75e-50 182
MS.gene08494.t1 MTR_6g477900 51.299 154 66 5 12 159 6 156 1.03e-42 152
MS.gene08494.t1 MTR_5g014300 45.509 167 82 4 12 170 6 171 7.46e-41 150
MS.gene08494.t1 MTR_3g064580 44.505 182 91 4 12 186 6 184 1.10e-40 155
MS.gene08494.t1 MTR_4g098630 46.196 184 83 7 12 185 6 183 9.54e-39 144
MS.gene08494.t1 MTR_2g064090 46.154 156 74 4 12 160 6 158 1.90e-38 144
MS.gene08494.t1 MTR_2g086880 48.649 148 69 5 15 161 21 162 7.38e-38 147
MS.gene08494.t1 MTR_2g086880 48.649 148 69 5 15 161 21 162 9.60e-38 145
MS.gene08494.t1 MTR_3g109340 47.059 153 74 4 12 160 22 171 2.85e-37 141
MS.gene08494.t1 MTR_5g076850 45.806 155 75 4 12 160 6 157 6.63e-37 144
MS.gene08494.t1 MTR_1g090723 47.368 152 72 4 15 160 11 160 6.65e-37 144
MS.gene08494.t1 MTR_1g090723 47.020 151 73 4 15 160 11 159 1.35e-36 143
MS.gene08494.t1 MTR_1g090723 47.020 151 73 4 15 160 11 159 1.72e-36 143
MS.gene08494.t1 MTR_5g012080 33.898 295 167 11 9 295 4 278 1.86e-36 138
MS.gene08494.t1 MTR_3g109340 46.753 154 74 5 12 160 22 172 4.01e-36 138
MS.gene08494.t1 MTR_4g036030 45.860 157 77 5 8 159 3 156 7.43e-36 137
MS.gene08494.t1 MTR_8g063550 42.384 151 78 5 15 159 9 156 9.99e-36 136
MS.gene08494.t1 MTR_3g096140 43.046 151 77 5 15 159 10 157 1.12e-35 134
MS.gene08494.t1 MTR_8g063550 42.384 151 78 5 15 159 9 156 1.73e-35 138
MS.gene08494.t1 MTR_3g096140 43.046 151 77 5 15 159 10 157 4.52e-35 135
MS.gene08494.t1 MTR_8g063550 42.384 151 78 5 15 159 9 156 8.10e-35 135
MS.gene08494.t1 MTR_3g435150 47.771 157 69 8 12 160 16 167 1.14e-34 132
MS.gene08494.t1 MTR_8g099750 42.683 164 78 5 4 156 6 164 1.22e-34 130
MS.gene08494.t1 MTR_3g070030 32.448 339 169 14 13 342 20 307 1.48e-34 133
MS.gene08494.t1 MTR_2g080010 40.120 167 80 4 11 160 14 177 1.50e-34 133
MS.gene08494.t1 MTR_8g093580 43.046 151 77 5 15 159 9 156 1.56e-34 136
MS.gene08494.t1 MTR_2g078700 50.382 131 61 3 11 140 22 149 3.37e-34 133
MS.gene08494.t1 MTR_4g101680 41.954 174 91 6 8 174 3 173 3.41e-34 132
MS.gene08494.t1 MTR_4g108760 45.223 157 73 7 12 160 17 168 3.53e-34 132
MS.gene08494.t1 MTR_1g069805 42.105 152 83 4 12 161 10 158 4.15e-34 130
MS.gene08494.t1 MTR_6g084430 43.030 165 83 7 10 168 3 162 9.60e-34 130
MS.gene08494.t1 MTR_2g093810 44.304 158 75 5 13 160 15 169 1.32e-33 130
MS.gene08494.t1 MTR_1g008740 42.857 154 81 4 12 160 13 164 1.61e-33 130
MS.gene08494.t1 MTR_4g089135 44.366 142 75 3 11 151 14 152 2.02e-33 130
MS.gene08494.t1 MTR_1g008740 42.857 154 81 4 12 160 27 178 2.09e-33 130
MS.gene08494.t1 MTR_0036s0150 43.709 151 78 3 15 160 8 156 2.37e-33 133
MS.gene08494.t1 MTR_1g097300 42.105 190 84 7 5 174 13 196 2.48e-33 134
MS.gene08494.t1 MTR_7g100990 40.881 159 81 5 11 159 10 165 2.75e-33 129
MS.gene08494.t1 MTR_4g035590 46.541 159 64 7 12 159 8 156 2.91e-33 130
MS.gene08494.t1 MTR_4g081870 45.000 160 69 7 12 159 9 161 3.21e-33 127
MS.gene08494.t1 MTR_1g096430 44.444 153 77 5 12 159 7 156 5.53e-33 129
MS.gene08494.t1 MTR_8g467490 40.120 167 82 5 15 166 17 180 9.39e-33 129
MS.gene08494.t1 MTR_7g011130 52.344 128 55 5 14 140 21 143 9.79e-33 128
MS.gene08494.t1 MTR_2g064470 40.828 169 86 5 12 173 11 172 1.21e-32 127
MS.gene08494.t1 MTR_7g085220 40.000 170 78 6 11 161 7 171 1.41e-32 127
MS.gene08494.t1 MTR_7g097090 42.568 148 80 4 12 157 10 154 2.16e-32 125
MS.gene08494.t1 MTR_6g012670 46.405 153 70 6 12 163 20 161 2.37e-32 126
MS.gene08494.t1 MTR_7g005280 40.252 159 85 4 11 165 14 166 2.58e-32 124
MS.gene08494.t1 MTR_2g062730 44.444 153 78 5 12 159 10 160 3.17e-32 127
MS.gene08494.t1 MTR_3g116070 42.763 152 75 3 12 153 23 172 3.24e-32 127
MS.gene08494.t1 MTR_8g076110 42.484 153 80 5 12 159 6 155 3.94e-32 125
MS.gene08494.t1 MTR_5g040420 38.728 173 88 5 9 166 10 179 7.79e-32 126
MS.gene08494.t1 MTR_5g021710 43.791 153 78 5 12 159 8 157 1.06e-31 125
MS.gene08494.t1 MTR_7g011120 51.562 128 56 5 14 140 10 132 1.15e-31 124
MS.gene08494.t1 MTR_4g134460 42.581 155 81 5 10 160 52 202 1.45e-31 126
MS.gene08494.t1 MTR_2g068920 39.412 170 81 6 10 159 18 185 1.84e-31 123
MS.gene08494.t1 MTR_2157s0010 40.000 165 80 6 12 160 8 169 2.19e-31 122
MS.gene08494.t1 MTR_6g032770 44.615 130 68 3 12 140 18 144 2.28e-31 125
MS.gene08494.t1 MTR_8g094580 34.404 218 109 9 12 209 7 210 2.41e-31 122
MS.gene08494.t1 MTR_6g011860 41.317 167 79 6 9 160 12 174 2.50e-31 125
MS.gene08494.t1 MTR_2g068880 39.779 181 87 6 10 170 19 197 2.56e-31 123
MS.gene08494.t1 MTR_3g088110 41.139 158 78 5 11 159 6 157 2.67e-31 122
MS.gene08494.t1 MTR_5g041940 40.588 170 86 7 12 171 3 167 2.84e-31 122
MS.gene08494.t1 MTR_3g096920 41.875 160 78 5 12 162 7 160 3.49e-31 122
MS.gene08494.t1 MTR_4g052620 41.139 158 81 4 10 156 3 159 3.92e-31 121
MS.gene08494.t1 MTR_7g085260 47.407 135 64 5 8 139 14 144 4.89e-31 124
MS.gene08494.t1 MTR_1g090720 42.675 157 75 4 15 159 45 198 5.73e-31 125
MS.gene08494.t1 MTR_3g096920 46.923 130 62 4 12 140 7 130 8.55e-30 119
MS.gene08494.t1 MTR_2g079990 35.784 204 111 8 12 206 16 208 8.93e-30 120
MS.gene08494.t1 MTR_8g024480 38.660 194 86 8 11 176 14 202 9.49e-30 121
MS.gene08494.t1 MTR_8g059170 35.321 218 123 9 12 218 14 224 6.52e-29 117
MS.gene08494.t1 MTR_4g075980 42.568 148 80 4 15 160 18 162 7.38e-29 116
MS.gene08494.t1 MTR_3g098810 36.364 176 93 5 4 165 6 176 1.68e-28 114
MS.gene08494.t1 MTR_3g070040 41.212 165 79 6 14 168 10 166 3.31e-28 115
MS.gene08494.t1 MTR_7g105170 37.500 168 88 6 9 161 1 166 4.44e-28 113
MS.gene08494.t1 MTR_3g096140 39.855 138 74 5 28 159 2 136 5.07e-28 114
MS.gene08494.t1 MTR_2g086690 39.744 156 81 5 13 156 5 159 1.09e-27 111
MS.gene08494.t1 MTR_3g098810 42.222 135 70 4 9 140 11 140 1.35e-27 109
MS.gene08494.t1 MTR_2g079990 42.636 129 68 4 12 139 16 139 3.88e-27 113
MS.gene08494.t1 MTR_5g090970 39.130 161 79 5 15 159 21 178 2.48e-26 109
MS.gene08494.t1 MTR_5g090970 38.509 161 79 5 15 159 21 177 9.20e-26 107
MS.gene08494.t1 MTR_8g093790 33.918 171 87 7 12 176 10 160 7.36e-20 87.8
MS.gene08494.t1 MTR_4g094302 28.409 176 99 7 12 173 11 173 6.20e-19 85.1
MS.gene08494.t1 MTR_4g094302 34.351 131 70 6 12 139 11 128 1.20e-18 83.6
MS.gene08494.t1 MTR_8g094580 31.875 160 78 7 70 209 8 156 1.96e-17 82.0
MS.gene08494.t1 MTR_3g096400 32.919 161 83 4 12 156 7 158 2.09e-16 78.6
MS.gene08494.t1 MTR_7g083330 30.636 173 99 7 12 174 18 179 6.85e-16 76.6
MS.gene08494.t1 MTR_7g070140 37.647 85 51 2 58 140 6 90 3.55e-14 70.1
MS.gene08494.t1 MTR_7g083360 30.827 133 78 5 12 139 10 133 1.33e-12 65.9
MS.gene08494.t1 MTR_7g116460 26.201 229 114 13 18 229 11 201 8.80e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene08494.t1 AT4G01550 52.247 178 72 4 14 185 6 176 1.22e-53 188
MS.gene08494.t1 AT4G35580 52.469 162 68 4 8 163 5 163 1.18e-51 184
MS.gene08494.t1 AT4G35580 52.469 162 68 4 8 163 5 163 1.29e-51 184
MS.gene08494.t1 AT4G35580 52.469 162 68 4 8 163 5 163 1.56e-51 183
MS.gene08494.t1 AT3G49530 51.235 162 67 5 8 161 9 166 1.15e-49 176
MS.gene08494.t1 AT1G33060 53.797 158 64 4 8 159 20 174 3.40e-49 179
MS.gene08494.t1 AT1G33060 53.797 158 64 4 8 159 20 174 3.61e-49 179
MS.gene08494.t1 AT3G49530 51.235 162 67 5 8 161 9 166 3.75e-49 176
MS.gene08494.t1 AT5G24590 51.875 160 69 4 8 161 9 166 2.49e-48 173
MS.gene08494.t1 AT4G01520 33.969 262 161 5 13 271 5 257 4.57e-44 158
MS.gene08494.t1 AT4G17980 48.101 158 73 3 12 161 6 162 1.50e-42 152
MS.gene08494.t1 AT4G17980 48.101 158 73 3 12 161 6 162 3.43e-42 152
MS.gene08494.t1 AT4G01540 38.158 228 120 7 14 228 6 225 7.87e-42 154
MS.gene08494.t1 AT4G01540 37.445 227 123 6 14 228 6 225 1.22e-41 154
MS.gene08494.t1 AT4G01540 38.158 228 120 7 14 228 6 225 1.27e-41 154
MS.gene08494.t1 AT4G01540 38.158 228 120 7 14 228 6 225 2.46e-41 155
MS.gene08494.t1 AT3G10490 48.026 152 69 4 15 159 30 178 6.30e-41 147
MS.gene08494.t1 AT5G17260 49.032 155 69 4 12 159 6 157 6.37e-41 154
MS.gene08494.t1 AT3G17730 45.251 179 79 6 12 184 6 171 1.37e-40 147
MS.gene08494.t1 AT3G10480 47.368 152 70 4 15 159 30 178 3.83e-40 151
MS.gene08494.t1 AT3G10480 47.682 151 70 4 15 159 30 177 4.21e-40 150
MS.gene08494.t1 AT3G10490 48.026 152 69 4 15 159 30 178 6.64e-40 150
MS.gene08494.t1 AT5G46590 48.750 160 73 5 12 164 6 163 3.09e-39 144
MS.gene08494.t1 AT1G65910 49.032 155 70 4 12 160 6 157 7.19e-39 150
MS.gene08494.t1 AT3G03200 47.742 155 71 4 12 159 6 157 3.61e-38 146
MS.gene08494.t1 AT1G02230 45.752 153 78 4 13 162 4 154 4.51e-37 140
MS.gene08494.t1 AT1G32510 45.029 171 73 6 12 166 6 171 1.17e-36 137
MS.gene08494.t1 AT5G61430 47.134 157 70 7 12 160 16 167 1.37e-36 139
MS.gene08494.t1 AT5G46590 51.538 130 60 3 12 140 6 133 2.34e-36 136
MS.gene08494.t1 AT2G24430 45.161 155 77 5 12 161 16 167 3.47e-36 137
MS.gene08494.t1 AT2G24430 45.161 155 77 5 12 161 16 167 3.47e-36 137
MS.gene08494.t1 AT1G12260 42.012 169 90 5 8 171 3 168 8.58e-36 136
MS.gene08494.t1 AT1G12260 42.012 169 90 5 8 171 3 168 1.26e-35 137
MS.gene08494.t1 AT2G27300 40.437 183 99 6 15 193 17 193 1.57e-35 135
MS.gene08494.t1 AT5G39820 49.275 138 66 3 10 146 18 152 4.47e-35 134
MS.gene08494.t1 AT5G39610 45.513 156 72 6 12 159 20 170 6.11e-35 132
MS.gene08494.t1 AT1G54330 47.682 151 73 4 12 159 6 153 7.02e-35 133
MS.gene08494.t1 AT5G62380 36.797 231 124 8 8 228 3 221 7.88e-35 134
MS.gene08494.t1 AT5G62380 36.797 231 124 8 8 228 3 221 7.88e-35 134
MS.gene08494.t1 AT5G07680 46.203 158 70 7 12 160 3 154 1.16e-34 132
MS.gene08494.t1 AT5G07680 46.203 158 70 7 12 160 17 168 1.27e-34 133
MS.gene08494.t1 AT3G44290 43.210 162 77 6 1 161 11 158 1.55e-34 130
MS.gene08494.t1 AT1G69490 43.038 158 75 6 12 159 9 161 1.72e-34 131
MS.gene08494.t1 AT3G15170 45.860 157 74 5 12 160 20 173 2.57e-34 132
MS.gene08494.t1 AT5G04410 45.752 153 72 5 15 160 12 160 3.13e-34 136
MS.gene08494.t1 AT3G10480 40.000 185 68 6 15 159 30 211 3.74e-34 135
MS.gene08494.t1 AT3G44290 34.818 247 129 11 1 241 11 231 4.69e-34 131
MS.gene08494.t1 AT3G10500 47.368 152 71 5 15 160 12 160 5.40e-34 135
MS.gene08494.t1 AT1G33280 46.711 152 74 5 12 159 8 156 8.65e-34 130
MS.gene08494.t1 AT1G62700 43.949 157 80 5 8 159 3 156 1.06e-33 132
MS.gene08494.t1 AT1G62700 43.949 157 80 5 8 159 3 156 1.06e-33 132
MS.gene08494.t1 AT3G04060 42.949 156 77 6 12 159 20 171 1.09e-33 130
MS.gene08494.t1 AT5G53950 49.618 131 62 3 10 139 15 142 1.55e-33 131
MS.gene08494.t1 AT1G76420 42.675 157 76 5 12 160 22 172 1.65e-33 130
MS.gene08494.t1 AT3G15510 41.011 178 83 6 16 174 21 195 1.75e-33 130
MS.gene08494.t1 AT1G01720 42.857 161 76 6 9 159 4 158 2.03e-33 129
MS.gene08494.t1 AT3G18400 43.210 162 80 6 10 164 3 159 2.08e-33 129
MS.gene08494.t1 AT1G26870 43.478 161 73 5 15 160 19 176 2.90e-33 131
MS.gene08494.t1 AT3G29035 50.000 130 59 5 12 140 24 148 3.73e-33 129
MS.gene08494.t1 AT5G66300 43.506 154 78 5 12 159 12 162 5.99e-33 127
MS.gene08494.t1 AT1G71930 43.791 153 78 5 12 159 9 158 1.15e-32 127
MS.gene08494.t1 AT1G71930 43.791 153 78 5 12 159 9 158 1.15e-32 127
MS.gene08494.t1 AT1G79580 46.053 152 76 5 12 159 17 166 1.28e-32 128
MS.gene08494.t1 AT1G79580 46.053 152 76 5 12 159 17 166 1.28e-32 128
MS.gene08494.t1 AT1G79580 46.053 152 76 5 12 159 17 166 1.28e-32 128
MS.gene08494.t1 AT1G79580 46.053 152 76 5 12 159 17 166 1.28e-32 128
MS.gene08494.t1 AT1G79580 46.053 152 76 5 12 159 17 166 1.28e-32 128
MS.gene08494.t1 AT5G08790 41.875 160 76 6 11 159 6 159 1.40e-32 126
MS.gene08494.t1 AT1G61110 41.520 171 78 6 7 159 11 177 2.23e-32 126
MS.gene08494.t1 AT1G34190 46.753 154 69 5 15 160 19 167 2.33e-32 130
MS.gene08494.t1 AT3G15500 35.780 218 121 9 12 220 14 221 2.76e-32 126
MS.gene08494.t1 AT3G04070 41.212 165 78 5 12 160 10 171 2.78e-32 127
MS.gene08494.t1 AT5G22290 33.735 249 141 9 2 247 19 246 3.14e-32 126
MS.gene08494.t1 AT4G10350 43.195 169 85 6 12 172 9 174 6.86e-32 125
MS.gene08494.t1 AT5G18270 42.308 156 78 5 12 159 21 172 9.43e-32 125
MS.gene08494.t1 AT4G27410 35.407 209 112 8 12 210 14 209 1.01e-31 124
MS.gene08494.t1 AT1G34180 46.053 152 73 4 15 160 19 167 1.33e-31 127
MS.gene08494.t1 AT1G56010 41.401 157 79 4 12 159 19 171 1.47e-31 124
MS.gene08494.t1 AT2G18060 43.137 153 79 5 12 159 9 158 1.72e-31 125
MS.gene08494.t1 AT2G18060 43.137 153 79 5 12 159 9 158 1.72e-31 125
MS.gene08494.t1 AT2G02450 42.953 149 77 5 15 159 54 198 1.83e-31 125
MS.gene08494.t1 AT2G02450 42.953 149 77 5 15 159 54 198 2.08e-31 126
MS.gene08494.t1 AT5G18270 41.667 156 79 5 12 159 21 172 3.77e-31 123
MS.gene08494.t1 AT1G34180 45.395 152 74 4 15 160 19 167 3.80e-31 127
MS.gene08494.t1 AT4G36160 42.484 153 80 5 12 159 10 159 4.78e-31 124
MS.gene08494.t1 AT4G36160 42.484 153 80 5 12 159 10 159 4.78e-31 124
MS.gene08494.t1 AT2G17040 40.606 165 87 5 15 171 9 170 5.47e-31 121
MS.gene08494.t1 AT5G09330 43.709 151 76 4 15 159 9 156 5.61e-31 125
MS.gene08494.t1 AT5G09330 43.709 151 76 4 15 159 9 156 5.61e-31 125
MS.gene08494.t1 AT5G09330 43.709 151 76 4 15 159 9 156 5.61e-31 125
MS.gene08494.t1 AT5G09330 43.709 151 76 4 15 159 9 156 5.61e-31 125
MS.gene08494.t1 AT5G09330 43.709 151 76 4 15 159 9 156 5.61e-31 125
MS.gene08494.t1 AT4G36160 42.484 153 80 5 12 159 14 163 5.86e-31 124
MS.gene08494.t1 AT1G52890 38.462 182 97 6 6 179 8 182 7.03e-31 122
MS.gene08494.t1 AT5G13180 39.103 156 84 4 11 161 13 162 1.36e-30 120
MS.gene08494.t1 AT3G61910 40.237 169 78 6 11 159 10 175 1.78e-30 121
MS.gene08494.t1 AT5G22380 41.772 158 80 5 10 156 3 159 2.12e-30 119
MS.gene08494.t1 AT3G04070 45.455 132 65 4 12 139 10 138 2.52e-30 122
MS.gene08494.t1 AT1G02250 42.857 154 83 4 13 163 4 155 4.37e-30 121
MS.gene08494.t1 AT5G64060 41.558 154 75 5 15 159 9 156 7.15e-30 120
MS.gene08494.t1 AT5G63790 38.251 183 85 7 11 171 59 235 8.22e-30 119
MS.gene08494.t1 AT5G04395 42.254 142 68 4 12 140 28 168 8.36e-30 115
MS.gene08494.t1 AT5G63790 38.251 183 85 7 11 171 49 225 8.39e-30 119
MS.gene08494.t1 AT4G27410 33.482 224 113 9 12 210 14 226 1.74e-29 118
MS.gene08494.t1 AT1G01010 42.857 168 79 5 14 173 5 163 2.39e-29 120
MS.gene08494.t1 AT2G43000 35.385 195 107 7 15 195 21 210 3.02e-29 117
MS.gene08494.t1 AT2G33480 40.645 155 80 5 11 161 14 160 3.86e-29 116
MS.gene08494.t1 AT1G77450 31.739 230 121 6 11 231 9 211 4.53e-29 115
MS.gene08494.t1 AT4G28530 38.323 167 84 5 12 161 10 174 6.02e-29 117
MS.gene08494.t1 AT2G33480 40.645 155 78 5 11 159 14 160 6.62e-29 115
MS.gene08494.t1 AT3G04420 40.588 170 97 4 13 180 4 171 8.16e-29 116
MS.gene08494.t1 AT3G12910 34.715 193 103 5 15 187 24 213 9.34e-29 116
MS.gene08494.t1 AT2G46770 31.579 285 154 13 12 266 16 289 9.64e-29 117
MS.gene08494.t1 AT3G12977 37.500 184 95 7 12 184 18 192 9.86e-29 115
MS.gene08494.t1 AT3G04420 42.384 151 83 4 13 161 4 152 1.22e-28 116
MS.gene08494.t1 AT1G34180 42.683 164 73 5 15 160 19 179 1.97e-28 118
MS.gene08494.t1 AT1G34180 42.073 164 74 5 15 160 19 179 4.21e-28 118
MS.gene08494.t1 AT1G02220 43.537 147 78 4 12 157 3 145 9.97e-28 115
MS.gene08494.t1 AT1G32770 40.719 167 75 7 12 159 16 177 1.43e-27 114
MS.gene08494.t1 AT1G52880 35.849 212 111 7 16 211 21 223 3.97e-27 112
MS.gene08494.t1 AT3G44350 35.000 160 94 4 10 160 3 161 1.95e-26 108
MS.gene08494.t1 AT3G44350 38.346 133 78 3 10 139 3 134 1.11e-25 103
MS.gene08494.t1 AT1G32870 44.156 154 73 6 15 160 13 161 2.11e-24 107
MS.gene08494.t1 AT1G32870 44.156 154 73 6 15 160 13 161 2.14e-24 107
MS.gene08494.t1 AT1G32870 44.156 154 73 6 15 160 49 197 3.68e-24 106
MS.gene08494.t1 AT3G04430 37.778 135 68 5 18 140 6 136 1.03e-20 90.5
MS.gene08494.t1 AT5G61430 42.453 106 51 5 63 160 1 104 7.44e-19 87.0
MS.gene08494.t1 AT5G64530 36.641 131 65 6 11 139 2 116 7.56e-19 84.0
MS.gene08494.t1 AT5G64530 36.154 130 65 6 12 139 3 116 1.22e-18 84.3
MS.gene08494.t1 AT3G12977 38.400 125 62 5 70 184 20 139 2.32e-18 84.7
MS.gene08494.t1 AT4G10350 39.496 119 63 4 61 172 11 127 1.10e-17 84.0
MS.gene08494.t1 AT1G56010 41.414 99 47 3 70 159 8 104 1.12e-17 83.2
MS.gene08494.t1 AT4G28530 41.284 109 47 3 12 105 10 116 8.37e-17 82.0
MS.gene08494.t1 AT3G10490 46.250 80 34 3 87 159 1 78 7.69e-16 79.3
MS.gene08494.t1 AT3G10490 46.250 80 34 3 87 159 1 78 7.69e-16 79.3
MS.gene08494.t1 AT3G56530 32.667 150 93 5 12 156 52 198 5.59e-14 73.6
MS.gene08494.t1 AT2G33480 36.735 98 54 3 68 159 8 103 4.67e-13 68.9
MS.gene08494.t1 AT3G55210 31.325 166 96 9 6 156 4 166 1.39e-12 68.6
MS.gene08494.t1 AT5G14000 28.571 140 90 4 12 148 15 147 6.67e-12 63.9
MS.gene08494.t1 AT2G18060 45.714 70 32 3 94 159 3 70 2.31e-11 65.1
MS.gene08494.t1 AT5G14490 28.977 176 101 6 12 169 58 227 2.47e-11 65.9
MS.gene08494.t1 AT5G14490 28.977 176 101 6 12 169 55 224 2.50e-11 65.5
MS.gene08494.t1 AT5G14490 28.977 176 101 6 12 169 58 227 3.61e-11 65.1
MS.gene08494.t1 AT5G14490 28.977 176 101 6 12 169 55 224 4.42e-11 64.3
MS.gene08494.t1 AT1G25580 29.670 182 100 8 12 172 58 232 5.47e-11 65.1

Find 87 sgRNAs with CRISPR-Local

Find 147 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGATTCCATATTTATTTC+TGG 0.145339 8.2:+72105645 None:intergenic
ATTGATTCCATATTTATTTC+TGG 0.145339 8.2:+72106102 None:intergenic
AGTACCTTTCGAGATGATTT+TGG 0.182200 8.2:-72104891 MS.gene08494:CDS
AGGGGTAGCAATAATATTAT+TGG 0.231520 8.2:-72107066 MS.gene08494:CDS
GCATCGTGAATTGGCGAGTT+TGG 0.245634 8.2:+72105558 None:intergenic
GCATCGTGAATTGGCGAGTT+TGG 0.263517 8.2:+72106015 None:intergenic
AAATATGGAATCAATATTTC+AGG 0.281347 8.2:-72105637 MS.gene08494:CDS
AAATATGGAATCAATATTTC+AGG 0.281347 8.2:-72106094 MS.gene08494:CDS
AATGATTATTGACGGGGATT+TGG 0.293193 8.2:-72105460 MS.gene08494:CDS
AATGATTATTGACGGGGATT+TGG 0.293193 8.2:-72105917 MS.gene08494:CDS
GATGTTGTCATTTCTAAAAT+AGG 0.297612 8.2:+72105536 None:intergenic
GATGTTGTCATTTCTAAAAT+AGG 0.297612 8.2:+72105993 None:intergenic
TACTATAGTGGTCGTGTTCC+TGG 0.304206 8.2:-72107024 MS.gene08494:CDS
TTTAAAAGGACAACTAATAA+TGG 0.327657 8.2:-72107129 MS.gene08494:CDS
GGGGTAGCAATAATATTATT+GGG 0.331309 8.2:-72107065 MS.gene08494:CDS
TTCAACTGCAGATATATCTT+TGG 0.332842 8.2:-72104844 MS.gene08494:CDS
TGGAAAGGATCGAAAGATTA+AGG 0.337849 8.2:-72107091 MS.gene08494:CDS
CATCGTGAATTGGCGAGTTT+GGG 0.338758 8.2:+72106016 None:intergenic
CTAAAATAGGCATCGTGAAT+TGG 0.340882 8.2:+72105549 None:intergenic
CTAAAATAGGCATCGTGAAT+TGG 0.340882 8.2:+72106006 None:intergenic
CAAAGAGTAAGAGGTTTAAA+AGG 0.342416 8.2:-72107143 MS.gene08494:CDS
CATCGTGAATTGGCGAGTTT+GGG 0.364030 8.2:+72105559 None:intergenic
TCAACGCATGGTAATGTTCC+TGG 0.366029 8.2:-72104966 MS.gene08494:CDS
TACTTTGCCAGAAATAAATA+TGG 0.372071 8.2:-72105652 MS.gene08494:CDS
TACTTTGCCAGAAATAAATA+TGG 0.372071 8.2:-72106109 MS.gene08494:CDS
TCCTCTTCAATGGTTTCAAA+TGG 0.379573 8.2:+72105958 None:intergenic
GGATCGAAAGATTAAGGTTA+GGG 0.381317 8.2:-72107085 MS.gene08494:CDS
TTTCTTGAACATCCTAGTTC+AGG 0.382346 8.2:-72105017 MS.gene08494:CDS
GATAGAAAACAGGTGCTTCC+AGG 0.383330 8.2:+72104948 None:intergenic
ATAAGTATGCAAAGAGTAAG+AGG 0.388091 8.2:-72107152 MS.gene08494:CDS
TTTGCATACTTATAATCAAT+AGG 0.393689 8.2:+72107162 None:intergenic
GAACTTATCTTCCTCTTCAA+TGG 0.404183 8.2:+72105948 None:intergenic
TACTTGCATACATCAACTTC+AGG 0.414938 8.2:+72107334 None:intergenic
AAGACTCTTGTTTACTATAG+TGG 0.415807 8.2:-72107036 MS.gene08494:CDS
CCAGTCCGAGTCGTTGAAAA+TGG 0.421990 8.2:-72105424 MS.gene08494:CDS
CCAGTCCGAGTCGTTGAAAA+TGG 0.421990 8.2:-72105881 MS.gene08494:CDS
TGGCTGGTCTTGGATGATAC+TGG 0.422975 8.2:+72104763 None:intergenic
TCCTCTTCAATGGTGTCAAA+TGG 0.426557 8.2:+72105501 None:intergenic
GAACTTATCTTCCTCTTCAA+TGG 0.430761 8.2:+72105491 None:intergenic
TTCCTGGTGTTAAAAGCAGC+TGG 0.431255 8.2:-72107008 MS.gene08494:CDS
GACATGAAGATGGCTGGTCT+TGG 0.436307 8.2:+72104753 None:intergenic
AGGATCGAAAGATTAAGGTT+AGG 0.440394 8.2:-72107086 MS.gene08494:CDS
TCGTTGAAAATGGTCTACTA+TGG 0.448952 8.2:-72105414 MS.gene08494:CDS
TCGTTGAAAATGGTCTACTA+TGG 0.448952 8.2:-72105871 MS.gene08494:CDS
ATTCTTTAAAGATAGAAAAC+AGG 0.461828 8.2:+72104938 None:intergenic
GTCAGTTCAATGATTATTGA+CGG 0.463736 8.2:-72105468 MS.gene08494:CDS
GTCAGTTCAATGATTATTGA+CGG 0.463736 8.2:-72105925 MS.gene08494:CDS
ACTCTTGACCATGTTCCTGT+TGG 0.471228 8.2:-72107448 MS.gene08494:CDS
TGATATTCTTGATACTTCAA+TGG 0.472818 8.2:-72105042 MS.gene08494:CDS
TTCAATCTCTGAAAATGAGC+AGG 0.480194 8.2:-72105592 MS.gene08494:CDS
TTCAATCTCTGAAAATGAGC+AGG 0.480194 8.2:-72106049 MS.gene08494:CDS
TCAGTTCAATGATTATTGAC+GGG 0.480425 8.2:-72105467 MS.gene08494:CDS
TCAGTTCAATGATTATTGAC+GGG 0.480425 8.2:-72105924 MS.gene08494:CDS
TCGAAAAGAGCTGCTTTAAG+AGG 0.483514 8.2:-72104732 MS.gene08494:CDS
CTTACAAGCTCTTCATCTGT+TGG 0.488308 8.2:+72107412 None:intergenic
GCAGAGTATTCGCCTGAACT+AGG 0.495091 8.2:+72105005 None:intergenic
TCGGAACTCATGTGTCTACT+TGG 0.499283 8.2:+72106290 None:intergenic
GGTCTGAATCTGAATCCAAC+AGG 0.502719 8.2:+72107433 None:intergenic
TCCATTTGAAACCATTGAAG+AGG 0.526651 8.2:-72105959 MS.gene08494:CDS
ACAAACCTTGTCATCTTCAA+AGG 0.536374 8.2:+72106960 None:intergenic
GGAATCAATATTTCAGGCAC+AGG 0.539733 8.2:-72105631 MS.gene08494:CDS
GGAATCAATATTTCAGGCAC+AGG 0.539733 8.2:-72106088 MS.gene08494:CDS
GATGCAGATATATGTGATGA+AGG 0.540324 8.2:-72106317 MS.gene08494:CDS
GTGAATTGGCGAGTTTGGGT+TGG 0.547773 8.2:+72106020 None:intergenic
TCCATTTGACACCATTGAAG+AGG 0.551076 8.2:-72105502 MS.gene08494:CDS
TATGAACCTTGGGAGTTACC+AGG 0.553928 8.2:-72107313 MS.gene08494:intron
TGTATGCAAGTATGAACCTT+GGG 0.557609 8.2:-72107323 MS.gene08494:CDS
AGGTATAACATTGTTGACAA+TGG 0.563065 8.2:+72107354 None:intergenic
GTGAATTGGCGAGTTTGGGA+TGG 0.564115 8.2:+72105563 None:intergenic
TAAAATCAGATGACCCAGAA+TGG 0.564520 8.2:-72107197 MS.gene08494:CDS
TGCTGAAGTAGTCTCTATGC+CGG 0.566096 8.2:-72105833 MS.gene08494:intron
CAGTTCAATGATTATTGACG+GGG 0.578711 8.2:-72105466 MS.gene08494:CDS
CAGTTCAATGATTATTGACG+GGG 0.578711 8.2:-72105923 MS.gene08494:CDS
TCCTGGTGTTAAAAGCAGCT+GGG 0.595945 8.2:-72107007 MS.gene08494:CDS
ATCTGCAGTTGAATCACAAG+AGG 0.597794 8.2:+72104854 None:intergenic
ATGCAGATATATGTGATGAA+GGG 0.608515 8.2:-72106316 MS.gene08494:CDS
TACCACCTTTGAAGATGACA+AGG 0.610149 8.2:-72106965 MS.gene08494:intron
ATCTGAATCCAACAGGAACA+TGG 0.616076 8.2:+72107440 None:intergenic
AACCTTGTCATCTTCAAAGG+TGG 0.630537 8.2:+72106963 None:intergenic
ACAGGAACATGGTCAAGAGT+CGG 0.636129 8.2:+72107451 None:intergenic
AAATTGTTGAAATCAACGCA+TGG 0.648209 8.2:-72104978 MS.gene08494:CDS
TGCAGATATATGTGATGAAG+GGG 0.648801 8.2:-72106315 MS.gene08494:CDS
TGCTGAAGTAGTCTCTACGC+CGG 0.650251 8.2:-72105376 MS.gene08494:intron
GCTGCTTTAAGAGGATCTTG+AGG 0.651591 8.2:-72104723 None:intergenic
ATGTATGCAAGTATGAACCT+TGG 0.657459 8.2:-72107324 MS.gene08494:CDS
GGAACATGGTCAAGAGTCGG+AGG 0.664688 8.2:+72107454 None:intergenic
GATCGAAAGATTAAGGTTAG+GGG 0.678144 8.2:-72107084 MS.gene08494:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGATGAAAAACATTAAAA+AGG + chr8.2:72104960-72104979 None:intergenic 15.0%
!! ATATCTATTATCATTTATCA+AGG + chr8.2:72105980-72105999 None:intergenic 15.0%
!! ATTTCTATTATCATTTATCA+AGG + chr8.2:72106437-72106456 None:intergenic 15.0%
!! TTTGAACAATATATATTTAC+CGG + chr8.2:72106840-72106859 None:intergenic 15.0%
!!! AGAACTTATATTTGTTTTAT+AGG - chr8.2:72106055-72106074 MS.gene08494:CDS 15.0%
!!! TTTTATGAGAAAATAATGAT+GGG + chr8.2:72104931-72104950 None:intergenic 15.0%
!!! TTTTTATGAGAAAATAATGA+TGG + chr8.2:72104932-72104951 None:intergenic 15.0%
!! AAATATGGAATCAATATTTC+AGG - chr8.2:72106100-72106119 MS.gene08494:CDS 20.0%
!! AAGAAAATAAGCATTATGAA+AGG + chr8.2:72107113-72107132 None:intergenic 20.0%
!! ATATGATACCAAAAGAAAAA+AGG + chr8.2:72105505-72105524 None:intergenic 20.0%
!! TATGATACCAAAAGAAAAAA+GGG + chr8.2:72105504-72105523 None:intergenic 20.0%
!! TTTAAAAGGACAACTAATAA+TGG - chr8.2:72105065-72105084 MS.gene08494:intron 20.0%
!! TTTATGAGAAAATAATGATG+GGG + chr8.2:72104930-72104949 None:intergenic 20.0%
!! TTTGCATACTTATAATCAAT+AGG + chr8.2:72105035-72105054 None:intergenic 20.0%
!!! ACTTATATTTGTTTTATAGG+TGG - chr8.2:72106058-72106077 MS.gene08494:CDS 20.0%
!!! ATAAATTGTGAAAAAGTACT+TGG - chr8.2:72106959-72106978 MS.gene08494:intron 20.0%
!!! ATTCTTTAAAGATAGAAAAC+AGG + chr8.2:72107259-72107278 None:intergenic 20.0%
!!! ATTGATTCCATATTTATTTC+TGG + chr8.2:72106095-72106114 None:intergenic 20.0%
!!! CAAAAGTTTCTTTATTTTCA+TGG + chr8.2:72105930-72105949 None:intergenic 20.0%
!!! CTTATATTTGTTTTATAGGT+GGG - chr8.2:72106059-72106078 MS.gene08494:CDS 20.0%
!!! GAAAATAAAGAAACTTTTGA+AGG - chr8.2:72105931-72105950 MS.gene08494:CDS 20.0%
!!! TGTTTTCTATCTTTAAAGAA+TGG - chr8.2:72107258-72107277 MS.gene08494:intron 20.0%
!!! TTCAGTTTTTGAATGTTAAT+AGG - chr8.2:72105684-72105703 MS.gene08494:intron 20.0%
!!! TTGTTTGTTTTTTTTTTACC+TGG + chr8.2:72104902-72104921 None:intergenic 20.0%
! AAAACACAAATCACAAACAA+TGG - chr8.2:72105560-72105579 MS.gene08494:CDS 25.0%
! ACACTGTCTTTGTAATTAAA+AGG + chr8.2:72105593-72105612 None:intergenic 25.0%
! ATACACACTTTCATATCATT+TGG + chr8.2:72106865-72106884 None:intergenic 25.0%
! CAGGAACAATATATATTTAC+CGG + chr8.2:72106383-72106402 None:intergenic 25.0%
! TACTTTGCCAGAAATAAATA+TGG - chr8.2:72106085-72106104 MS.gene08494:CDS 25.0%
! TATATATTGTTCCTGATGTA+AGG - chr8.2:72106388-72106407 MS.gene08494:intron 25.0%
! TGATATTCTTGATACTTCAA+TGG - chr8.2:72107152-72107171 MS.gene08494:CDS 25.0%
!! AAATTTTGCCAACAAAGTTT+TGG - chr8.2:72106453-72106472 MS.gene08494:intron 25.0%
!! ATATTTTGCGAACAAAGTTT+TGG - chr8.2:72105996-72106015 MS.gene08494:CDS 25.0%
!! TTACTATTTTCCTATATGAC+TGG - chr8.2:72105423-72105442 MS.gene08494:CDS 25.0%
!! TTTGGTATCATATTTGTTAG+AGG - chr8.2:72105512-72105531 MS.gene08494:CDS 25.0%
!!! AGTTTCTTTATTTTCATGGT+CGG + chr8.2:72105926-72105945 None:intergenic 25.0%
!!! GATGTTGTCATTTCTAAAAT+AGG + chr8.2:72106204-72106223 None:intergenic 25.0%
!!! GGTTTGTTTTGTTACAATAA+AGG - chr8.2:72105250-72105269 MS.gene08494:intron 25.0%
AAAAGACTAAAAGAGTGACT+TGG + chr8.2:72105665-72105684 None:intergenic 30.0%
AAAAGTCCGCTACAAAATTT+CGG + chr8.2:72105806-72105825 None:intergenic 30.0%
AAATTGTTGAAATCAACGCA+TGG - chr8.2:72107216-72107235 MS.gene08494:intron 30.0%
AGGGGTAGCAATAATATTAT+TGG - chr8.2:72105128-72105147 MS.gene08494:intron 30.0%
AGGTATAACATTGTTGACAA+TGG + chr8.2:72104843-72104862 None:intergenic 30.0%
ATAAGTATGCAAAGAGTAAG+AGG - chr8.2:72105042-72105061 MS.gene08494:CDS 30.0%
ATGCAGATATATGTGATGAA+GGG - chr8.2:72105878-72105897 MS.gene08494:CDS 30.0%
CAAAGAGTAAGAGGTTTAAA+AGG - chr8.2:72105051-72105070 MS.gene08494:intron 30.0%
CATTCTAGTAGCATTTCAAA+AGG + chr8.2:72107089-72107108 None:intergenic 30.0%
GACAAAACATGAGTTTATTC+AGG - chr8.2:72105398-72105417 MS.gene08494:CDS 30.0%
GGGGTAGCAATAATATTATT+GGG - chr8.2:72105129-72105148 MS.gene08494:intron 30.0%
GTCAGTTCAATGATTATTGA+CGG - chr8.2:72106269-72106288 MS.gene08494:CDS 30.0%
TCAGTTCAATGATTATTGAC+GGG - chr8.2:72106270-72106289 MS.gene08494:CDS 30.0%
TTCAACTGCAGATATATCTT+TGG - chr8.2:72107350-72107369 MS.gene08494:CDS 30.0%
TTGGATGAAATGAAATGTCT+AGG - chr8.2:72106978-72106997 MS.gene08494:CDS 30.0%
! AAGACTCTTGTTTACTATAG+TGG - chr8.2:72105158-72105177 MS.gene08494:intron 30.0%
! GGACAACTAATAATGGTTTT+TGG - chr8.2:72105072-72105091 MS.gene08494:intron 30.0%
! GTTTTTGCGTTTTCTTATAG+TGG + chr8.2:72107412-72107431 None:intergenic 30.0%
! TATCATCCGAAATTTTGTAG+CGG - chr8.2:72105797-72105816 MS.gene08494:intron 30.0%
! TCTTCTACAATTTTACAGTG+TGG - chr8.2:72107129-72107148 MS.gene08494:CDS 30.0%
!! CTTTAAAGCCAAAACTTTGT+TGG + chr8.2:72106007-72106026 None:intergenic 30.0%
!!! CTTTGAACCCTTTTTTCTTT+TGG - chr8.2:72105494-72105513 MS.gene08494:CDS 30.0%
!!! GTAACTTGTTTTTGAGATAG+TGG + chr8.2:72104808-72104827 None:intergenic 30.0%
!!! TTCATCTTTTTCAGCTTGTT+CGG - chr8.2:72104971-72104990 MS.gene08494:CDS 30.0%
AATGATTATTGACGGGGATT+TGG - chr8.2:72106277-72106296 MS.gene08494:CDS 35.0%
ACAAACCTTGTCATCTTCAA+AGG + chr8.2:72105237-72105256 None:intergenic 35.0%
AGCTGAGAAAAAAGCTGAAA+AGG - chr8.2:72105849-72105868 MS.gene08494:CDS 35.0%
AGGATCGAAAGATTAAGGTT+AGG - chr8.2:72105108-72105127 MS.gene08494:intron 35.0%
ATGTATGCAAGTATGAACCT+TGG - chr8.2:72104870-72104889 MS.gene08494:CDS 35.0%
CAGTTCAATGATTATTGACG+GGG - chr8.2:72106271-72106290 MS.gene08494:CDS 35.0%
GAACTTATCTTCCTCTTCAA+TGG + chr8.2:72106249-72106268 None:intergenic 35.0%
GACACAAGAAAAACCATTCT+GGG + chr8.2:72105013-72105032 None:intergenic 35.0%
GATCGAAAGATTAAGGTTAG+GGG - chr8.2:72105110-72105129 MS.gene08494:intron 35.0%
GATGCAGATATATGTGATGA+AGG - chr8.2:72105877-72105896 MS.gene08494:CDS 35.0%
GGATCGAAAGATTAAGGTTA+GGG - chr8.2:72105109-72105128 MS.gene08494:intron 35.0%
TAAAATCAGATGACCCAGAA+TGG - chr8.2:72104997-72105016 MS.gene08494:CDS 35.0%
TACTTGCATACATCAACTTC+AGG + chr8.2:72104863-72104882 None:intergenic 35.0%
TATTAGTGAACCATCCATTG+CGG - chr8.2:72106889-72106908 MS.gene08494:intron 35.0%
TCAGCATGTTTCATGTAGAA+AGG + chr8.2:72106036-72106055 None:intergenic 35.0%
TCCTCTTCAATGGTTTCAAA+TGG + chr8.2:72106239-72106258 None:intergenic 35.0%
TCGTTGAAAATGGTCTACTA+TGG - chr8.2:72106323-72106342 MS.gene08494:CDS 35.0%
TGCAGATATATGTGATGAAG+GGG - chr8.2:72105879-72105898 MS.gene08494:CDS 35.0%
TGGAAAGGATCGAAAGATTA+AGG - chr8.2:72105103-72105122 MS.gene08494:intron 35.0%
TGTATGCAAGTATGAACCTT+GGG - chr8.2:72104871-72104890 MS.gene08494:CDS 35.0%
TTGAAGGAATTCCTGATGTA+AGG - chr8.2:72105947-72105966 MS.gene08494:CDS 35.0%
TTTCTTGAACATCCTAGTTC+AGG - chr8.2:72107177-72107196 MS.gene08494:CDS 35.0%
! AGTACCTTTCGAGATGATTT+TGG - chr8.2:72107303-72107322 MS.gene08494:intron 35.0%
! CATTTTCAGAGATTGAAGGA+AGG + chr8.2:72106142-72106161 None:intergenic 35.0%
! CTAAAATAGGCATCGTGAAT+TGG + chr8.2:72106191-72106210 None:intergenic 35.0%
! GTACCTTTCGAGATGATTTT+GGG - chr8.2:72107304-72107323 MS.gene08494:intron 35.0%
! TACCTTTCGAGATGATTTTG+GGG - chr8.2:72107305-72107324 MS.gene08494:intron 35.0%
! TCCATTTGAAACCATTGAAG+AGG - chr8.2:72106235-72106254 MS.gene08494:intron 35.0%
! TGCTCATTTTCAGAGATTGA+AGG + chr8.2:72106146-72106165 None:intergenic 35.0%
! TTCAATCTCTGAAAATGAGC+AGG - chr8.2:72106145-72106164 MS.gene08494:intron 35.0%
!! AATGGTTTTTGGAAAGCTAC+TGG - chr8.2:72105083-72105102 MS.gene08494:intron 35.0%
!! ACTAAAAGAGTGACTTGGTA+AGG + chr8.2:72105660-72105679 None:intergenic 35.0%
!! CGCATTAGTTTGTTTAGTCT+TGG - chr8.2:72105737-72105756 MS.gene08494:intron 35.0%
!! TTGCGTTTTCTTATAGTGGA+AGG + chr8.2:72107408-72107427 None:intergenic 35.0%
!! TTTTTGGAAAGCTACTGGAA+AGG - chr8.2:72105088-72105107 MS.gene08494:intron 35.0%
AACCTTGTCATCTTCAAAGG+TGG + chr8.2:72105234-72105253 None:intergenic 40.0%
AAGGATGAACTCCTTACATC+AGG + chr8.2:72105961-72105980 None:intergenic 40.0%
ATCTGAATCCAACAGGAACA+TGG + chr8.2:72104757-72104776 None:intergenic 40.0%
ATCTGCAGTTGAATCACAAG+AGG + chr8.2:72107343-72107362 None:intergenic 40.0%
CTTACAAGCTCTTCATCTGT+TGG + chr8.2:72104785-72104804 None:intergenic 40.0%
GGAATCAATATTTCAGGCAC+AGG - chr8.2:72106106-72106125 MS.gene08494:CDS 40.0%
GGACACAAGAAAAACCATTC+TGG + chr8.2:72105014-72105033 None:intergenic 40.0%
TCCATTTGACACCATTGAAG+AGG - chr8.2:72106692-72106711 MS.gene08494:intron 40.0%
TGTAAGGAGTTCCTGATGTA+AGG - chr8.2:72106404-72106423 MS.gene08494:intron 40.0%
TTCAGAACAGCCAGTCATAT+AGG + chr8.2:72105436-72105455 None:intergenic 40.0%
! ACCTTTCGAGATGATTTTGG+GGG - chr8.2:72107306-72107325 MS.gene08494:intron 40.0%
! AGCTCTTTTCGACATGAAGA+TGG + chr8.2:72107454-72107473 None:intergenic 40.0%
! CACCAAGCATTGCTAAAATG+TGG + chr8.2:72106929-72106948 None:intergenic 40.0%
! GTAGACCATTTTCAACGACT+CGG + chr8.2:72106321-72106340 None:intergenic 40.0%
! TACCACCTTTGAAGATGACA+AGG - chr8.2:72105229-72105248 MS.gene08494:intron 40.0%
! TCCTCTTCAATGGTGTCAAA+TGG + chr8.2:72106696-72106715 None:intergenic 40.0%
! TCGAAAAGAGCTGCTTTAAG+AGG - chr8.2:72107462-72107481 MS.gene08494:CDS 40.0%
! TTTTTACCTGGTAACTCCCA+AGG + chr8.2:72104890-72104909 None:intergenic 40.0%
!! AGATGATTTTGGGGGATTAG+AGG - chr8.2:72107314-72107333 MS.gene08494:CDS 40.0%
!! GACCACATTTTAGCAATGCT+TGG - chr8.2:72106924-72106943 MS.gene08494:intron 40.0%
!!! ATCTTTTTCAGCTTGTTCGG+TGG - chr8.2:72104974-72104993 MS.gene08494:CDS 40.0%
ACAGGAACATGGTCAAGAGT+CGG + chr8.2:72104746-72104765 None:intergenic 45.0%
ACTCTTGACCATGTTCCTGT+TGG - chr8.2:72104746-72104765 MS.gene08494:CDS 45.0%
CATCAGGAACTCCTTACATC+AGG + chr8.2:72106402-72106421 None:intergenic 45.0%
CATCGTGAATTGGCGAGTTT+GGG + chr8.2:72106181-72106200 None:intergenic 45.0%
GATAGAAAACAGGTGCTTCC+AGG + chr8.2:72107249-72107268 None:intergenic 45.0%
GGTCTGAATCTGAATCCAAC+AGG + chr8.2:72104764-72104783 None:intergenic 45.0%
GTCAAGAGTCGGAGGAAAAA+AGG + chr8.2:72104735-72104754 None:intergenic 45.0%
TACTATAGTGGTCGTGTTCC+TGG - chr8.2:72105170-72105189 MS.gene08494:intron 45.0%
TATGAACCTTGGGAGTTACC+AGG - chr8.2:72104881-72104900 MS.gene08494:CDS 45.0%
TCAAACTCATGTCACCGCAA+TGG + chr8.2:72106906-72106925 None:intergenic 45.0%
TCCCCCAAAATCATCTCGAA+AGG + chr8.2:72107310-72107329 None:intergenic 45.0%
TCGGAACTCATGTGTCTACT+TGG + chr8.2:72105907-72105926 None:intergenic 45.0%
TGCTGAAGTAGTCTCTATGC+CGG - chr8.2:72106361-72106380 MS.gene08494:CDS 45.0%
! CTTTTCGACATGAAGATGGC+TGG + chr8.2:72107450-72107469 None:intergenic 45.0%
! TCAACGCATGGTAATGTTCC+TGG - chr8.2:72107228-72107247 MS.gene08494:intron 45.0%
! TCCTGGTGTTAAAAGCAGCT+GGG - chr8.2:72105187-72105206 MS.gene08494:intron 45.0%
! TTCCTGGTGTTAAAAGCAGC+TGG - chr8.2:72105186-72105205 MS.gene08494:intron 45.0%
ACTCATGTCACCGCAATGGA+TGG + chr8.2:72106902-72106921 None:intergenic 50.0%
CCAGTCCGAGTCGTTGAAAA+TGG - chr8.2:72106313-72106332 MS.gene08494:CDS 50.0%
GCATCGTGAATTGGCGAGTT+TGG + chr8.2:72106182-72106201 None:intergenic 50.0%
GTGAATTGGCGAGTTTGGGA+TGG + chr8.2:72106634-72106653 None:intergenic 50.0%
GTGAATTGGCGAGTTTGGGT+TGG + chr8.2:72106177-72106196 None:intergenic 50.0%
TGCTGAAGTAGTCTCTACGC+CGG - chr8.2:72106818-72106837 MS.gene08494:intron 50.0%
! GCAGAGTATTCGCCTGAACT+AGG + chr8.2:72107192-72107211 None:intergenic 50.0%
!! CCATTTTCAACGACTCGGAC+TGG + chr8.2:72106316-72106335 None:intergenic 50.0%
!! GACATGAAGATGGCTGGTCT+TGG + chr8.2:72107444-72107463 None:intergenic 50.0%
!! TGGCTGGTCTTGGATGATAC+TGG + chr8.2:72107434-72107453 None:intergenic 50.0%
!!! ACCCAGCTGCTTTTAACACC+AGG + chr8.2:72105191-72105210 None:intergenic 50.0%
GGAACATGGTCAAGAGTCGG+AGG + chr8.2:72104743-72104762 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 72104725 72107491 72104725 ID=MS.gene08494
chr8.2 mRNA 72104725 72107491 72104725 ID=MS.gene08494.t1;Parent=MS.gene08494
chr8.2 exon 72107314 72107491 72107314 ID=MS.gene08494.t1.exon1;Parent=MS.gene08494.t1
chr8.2 CDS 72107314 72107491 72107314 ID=cds.MS.gene08494.t1;Parent=MS.gene08494.t1
chr8.2 exon 72106966 72107231 72106966 ID=MS.gene08494.t1.exon2;Parent=MS.gene08494.t1
chr8.2 CDS 72106966 72107231 72106966 ID=cds.MS.gene08494.t1;Parent=MS.gene08494.t1
chr8.2 exon 72106253 72106399 72106253 ID=MS.gene08494.t1.exon3;Parent=MS.gene08494.t1
chr8.2 CDS 72106253 72106399 72106253 ID=cds.MS.gene08494.t1;Parent=MS.gene08494.t1
chr8.2 exon 72105834 72106139 72105834 ID=MS.gene08494.t1.exon4;Parent=MS.gene08494.t1
chr8.2 CDS 72105834 72106139 72105834 ID=cds.MS.gene08494.t1;Parent=MS.gene08494.t1
chr8.2 exon 72105377 72105682 72105377 ID=MS.gene08494.t1.exon5;Parent=MS.gene08494.t1
chr8.2 CDS 72105377 72105682 72105377 ID=cds.MS.gene08494.t1;Parent=MS.gene08494.t1
chr8.2 exon 72104725 72105069 72104725 ID=MS.gene08494.t1.exon6;Parent=MS.gene08494.t1
chr8.2 CDS 72104725 72105069 72104725 ID=cds.MS.gene08494.t1;Parent=MS.gene08494.t1
Gene Sequence

>MS.gene08494

ATGACAACCTTTTTTCCTCCGACTCTTGACCATGTTCCTGTTGGATTCAGATTCAGACCAACAGATGAAGAGCTTGTAAGCCACTATCTCAAAAACAAGTTACTTGATAACGATTCCATTGTCAACAATGTTATACCTGAAGTTGATGTATGCAAGTATGAACCTTGGGAGTTACCAGGTAAAAAAAAAACAAACAAACAAACCCCATCATTATTTTCTCATAAAAATGCAACCTTTTTAATGTTTTTCATCTTTTTCAGCTTGTTCGGTGGTAAAATCAGATGACCCAGAATGGTTTTTCTTGTGTCCTATTGATTATAAGTATGCAAAGAGTAAGAGGTTTAAAAGGACAACTAATAATGGTTTTTGGAAAGCTACTGGAAAGGATCGAAAGATTAAGGTTAGGGGTAGCAATAATATTATTGGGATTAAGAAGACTCTTGTTTACTATAGTGGTCGTGTTCCTGGTGTTAAAAGCAGCTGGGTGATTCATGAATATCATGATACCACCTTTGAAGATGACAAGGTTTGTTTTGTTACAATAAAGGTTTTAAATGAGTTTATTAGAGTTGTTATTTATTTATTTATGAAAAATGAATATCATGAAAAATATTGACTTTTCATGTTTTATAAGTTTGTATCAGAGTTATTATTTATTTATTTAAATGAGTATGACAAAACATGAGTTTATTCAGGATTTACTATTTTCCTATATGACTGGCTGTTCTGAAATTTGATGTTTATTGAATTCATTGTTTGAAAGTTTGAACTTTGAACCCTTTTTTCTTTTGGTATCATATTTGTTAGAGGAACAACTAGTAATAGCAGATTAAAGAAAACACAAATCACAAACAATGGAATATGACCTTTTAATTACAAAGACAGTGTTTGAGATAAAGTTTTTTGTTGAAATGTTATTTTGCTGTATGACACCTTACCAAGTCACTCTTTTAGTCTTTTTCAGTTTTTGAATGTTAATAGGACTGTTCAAGAAACTAGTTTATGATTTTGACGCATTAGTTTGTTTAGTCTTGGTATCTATTTGTATAAATTGCATAAAATAAATGCTGATTATCATCCGAAATTTTGTAGCGGACTTTTGTTTTATGTCGCTTGATGAAGAAAGCTGAGAAAAAAGCTGAAAAGGAAGCTGATGCAGATATATGTGATGAAGGGGAGCCAAGTAGACACATGAGTTCCGACCATGAAAATAAAGAAACTTTTGAAGGAATTCCTGATGTAAGGAGTTCATCCTTGATAAATGATAATAGATATTTTGCGAACAAAGTTTTGGCTTTAAAGTTTAAACCTTTCTACATGAAACATGCTGAGAACTTATATTTGTTTTATAGGTGGGTGATACTTTGCCAGAAATAAATATGGAATCAATATTTCAGGCACAGGCAGAAAAATACCTTCCTTCAATCTCTGAAAATGAGCAGGAAGTATCCAACCCAAACTCGCCAATTCACGATGCCTATTTTAGAAATGACAACATCATTGTTCAGAGTCCATTTGAAACCATTGAAGAGGAAGATAAGTTCGTCAGTTCAATGATTATTGACGGGGATTTGGACAACGCTCATGTCCAGTCCGAGTCGTTGAAAATGGTCTACTATGGAAGCAGTGACACAGATGCTGAAGTAGTCTCTATGCCGGTAAATATATATTGTTCCTGATGTAAGGAGTTCCTGATGTAAGGAGTTCATCCTTGATAAATGATAATAGAAATTTTGCCAACAAAGTTTTGGCTTTAAAGTTTAAACCTTTCTACATGAAACATGCTGAGAACTTATATTTGTTTTATAGGTGGGTGATACTTTGCCAGAAATAAATATGGAATCAATATTTCAGGCACAGGCAGAAAAATACCTTCCTTCAATCTCTGAAAATGAGCAGGAAGTATCCATCCCAAACTCGCCAATTCACGATGCCTATTTTAGAAATGACAACATCATTGTTCAGAGTCCATTTGACACCATTGAAGAGGAAGATAAGTTCGTCAGTTCAATGATTATTGACGGGGATTTGGACAACGCTCATGTCCAGTCCGAGTCGTTGAAAATGGTCTACTATGGAAGCAGTGACACAGATGCTGAAGTAGTCTCTACGCCGGTAAATATATATTGTTCAAAGACCAAATGATATGAAAGTGTGTATCTCTTATTAGTGAACCATCCATTGCGGTGACATGAGTTTGACCACATTTTAGCAATGCTTGGTGATTTTCTTTTATAAATTGTGAAAAAGTACTTGGATGAAATGAAATGTCTAGGTTGAGTTAGTTTTGATGCTTTTCTTTAATAGATTCAGAAGTTTTTTTTTTCTTCTCTTTATACTGCATGTTGCTGTTATTCTCTTCCTTTTGAAATGCTACTAGAATGACCTTTCATAATGCTTATTTTCTTCTACAATTTTACAGTGTGGTGATATTCTTGATACTTCAATGGCATTTCTTGAACATCCTAGTTCAGGCGAATACTCTGCATCAAAATTGTTGAAATCAACGCATGGTAATGTTCCTGGAAGCACCTGTTTTCTATCTTTAAAGAATGGTGAAATCGAAGACAACAACGAGAGTACCTTTCGAGATGATTTTGGGGGATTAGAGGCATCCTCTTGTGATTCAACTGCAGATATATCTTTGGAGACGATCAATTGTATTGAAATTTCTAGTTTACCTTCCACTATAAGAAAACGCAAAAACCAGTATCATCCAAGACCAGCCATCTTCATGTCGAAAAGAGCTGCTTTAAGAGGATCTTGA
Protein sequence

>MS.gene08494.t1

MTTFFPPTLDHVPVGFRFRPTDEELVSHYLKNKLLDNDSIVNNVIPEVDVCKYEPWELPACSVVKSDDPEWFFLCPIDYKYAKSKRFKRTTNNGFWKATGKDRKIKVRGSNNIIGIKKTLVYYSGRVPGVKSSWVIHEYHDTTFEDDKRTFVLCRLMKKAEKKAEKEADADICDEGEPSRHMSSDHENKETFEGIPDVGDTLPEINMESIFQAQAEKYLPSISENEQEVSNPNSPIHDAYFRNDNIIVQSPFETIEEEDKFVSSMIIDGDLDNAHVQSESLKMVYYGSSDTDAEVVSMPVGDTLPEINMESIFQAQAEKYLPSISENEQEVSIPNSPIHDAYFRNDNIIVQSPFDTIEEEDKFVSSMIIDGDLDNAHVQSESLKMVYYGSSDTDAEVVSTPCGDILDTSMAFLEHPSSGEYSASKLLKSTHGNVPGSTCFLSLKNGEIEDNNESTFRDDFGGLEASSCDSTADISLETINCIEISSLPSTIRKRKNQYHPRPAIFMSKRAALRGS